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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr6 | genome | chr6:186190..188482 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G00430.2 ID=NO06G00430.2|Name=NO06G00430.2|organism=Nannochloropsis oceanica|type=mRNA|length=2074bp
ACACTCGCACAGACAAAAGGCCCTCTTCGTTGACATTGTCATGTCTACCT
AAGTCATAAAGCCATCTTTTCATCTAGCTCGCCATGCGGCGCCTACTTTT
TCCTGCCTCCCCCCTCTCCTCAACCACTCCCTGCAGCAGCGACAAAAGCT
CCTGTCGCAGCAAGACCTCCGTACTACCAGCACGACAACAGATTTCTTAT
TTTCTCCTTTTATCTACCGCCACATGCTGCTGCCTCACTTTTCTCCATTT
TTCACACTATGGGCAACACCTCTCCACCCTCCTCCCCTTCCTCCACCTGT
ACCCGGCACATACTGTCACCTCCGTCTTTGCCGTGCCTCCTGAGCCTTCC
TCTCCATACTCCTCCGACGGGTACACCCCTGACTGGGATCACGTCCTGGC
TCCACCGACCCTGCAACCCCAGACTATTCACCTCAATTTAAACCGAGACG
ACGTCACTGAAGACTTGCAAGATCTCTCCCACATTATCCTCACCACAGGC
AGCCTCCTGACAAGCACATGGCCTAATGTGATTCCCCACCTCTCCTTCTC
CCTCCGGGGTATCTATGCCCTCCTCCCTCCGAGGTATCTGTCAAAACCCC
TACTTATTCGAATGGGCGATGGAATAGATCCTGCCCCTTTTCCAGTCCTG
ACCAAAGCGAGGGTAATTAATGATAGCATGGCCATTTTGATGCCCATTGA
ATACGAAAGACATTTCGGCTATGATTTTCATAGGCTAGTGGAGCCAGAGG
AGTTTGGGGAGTCGTCTTTGACGGCGGCGGAGGCTAAGGCTGTGGGTGCT
GCTGATACTGGTGGTGCTGCTACTAGTAGTTATGCTACTGGTGGTTGGGT
CGCTGCAACGGGAAGTGGTGTTGCCGACGTTGATGAGGCTGCGACCAATG
TCGGCGCTGCCACTTCTTCCAATACTCTTTCTTTTAGCTCCTCCTCATCG
TCCTCCCCCGTGTCCTCCTCGTCCTTCTCGTCCTCCTCCCCTCCTCCCTT
CGACCCTCCCTTCCGAGAGAAGGCCCCTCAGGCCATATGGCGAGGTGTTA
CCACCGGCGGCTACGTTTGGGACCCCCTAATCCACGACAAAGACAACCAC
CGAAAAGCATTGATCGATACCTGGGGAGGGGACGTCAGCCCCAAAGTGGA
CGTGGCCTTTACGGGGTGGTGCCAGGGGGCGCAAGACTTGTGAGTATTAT
ATCATTCAATTACGTCTTAAAATGTGTTTCAAGCATTTATGTGTAATGGC
GTATATTGATGTGAACCCATTTGACTGACTAGGCGAAAGTCATGGAAGAC
CCTTGCATGTGTGAAGATTGAGAATGGGAAGCCAGTCAATCTGTGCGTGT
GTGCATGGGCACGGCGTCAGGTCTCAGGCCGTGGTGACGCGGAGCAGGAG
GCTCGTCAGTTAGTATTCGTAGTGGTAGCACGTTAGTTCTGTATGAGTCA
TTCTCCCTTCCCTTCTCCGAATGAATGCAGCCATGGACACAATTTCTTTC
TCGACCCCTTTTTATGCCTGTCTCTCATTTCATGTCCCGCCACCCAACCG
GCCTTCACACCGCAGCGTCTCCTACTGGTCGCCCTTCCTCAAGCCCTCCC
TCCCCCAAGCCGAGCAGCTCCAATACCGCTATCTCATCTCCGTCGAGGGC
AACGACGTCGCCACTGGGCTGAAGTGGATGCTGGCCAGCAACAGCGTGGT
CTTCATGCCGATGCCGCGGCGGGAGATCTGGAGCCGGGAAGGTCTGTTGA
TGCCCTGGGTGCATTTCATTCCCGTTCAAGCCGATTTTTCTGACCTTCTG
CTAAGGATAGAGGAGTGCGAGAGGGACCTGGAGAGATGCGAGGCCGTAAG
CGAGCGGGCAAGCAAGTACATGAAGAGCGGCTTTGGCGACATTGACAGGA
CGTACGCACAAGCTGCGGCACGATTGAGAGAATACCTTGATAAAGTGACG
ATTGAAATTGTGTAGCTGAATCGAAATTAAAGAAAAAGGCTACATATGAA
GACATGAAGAGAAGAGAAGCGATAATGCACGGCAAGTAATGAAAAAGGAA
GACGGAAAATGTCATGCACCGGAA back to topprotein sequence of NO06G00430.2 >NO06G00430.2-protein ID=NO06G00430.2-protein|Name=NO06G00430.2|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MRRLLFPASPLSSTTPCSSDKSSCRSKTSVLPARQQISYFLLLSTATCCC
LTFLHFSHYGQHLSTLLPFLHLYPAHTVTSVFAVPPEPSSPYSSDGYTPD
WDHVLAPPTLQPQTIHLNLNRDDVTEDLQDLSHIILTTGSLLTSTWPNVI
PHLSFSLRGIYALLPPRYLSKPLLIRMGDGIDPAPFPVLTKARVINDSMA
ILMPIEYERHFGYDFHRLVEPEEFGESSLTAAEAKAVGAADTGGAATSSY
ATGGWVAATGSGVADVDEAATNVGAATSSNTLSFSSSSSSSPVSSSSFSS
SSPPPFDPPFREKAPQAIWRGVTTGGYVWDPLIHDKDNHRKALIDTWGGD
VSPKVDVAFTGWCQGAQDL* back to topmRNA from alignment at chr6:186190..188482+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G00430.2 ID=NO06G00430.2|Name=NO06G00430.2|organism=Nannochloropsis oceanica|type=mRNA|length=2293bp|location=Sequence derived from alignment at chr6:186190..188482+ (Nannochloropsis oceanica)
ACACTCGCACAGACAAAAGGCCCTCTTCGTTGACATTGTCATGTCTACCT
AAGTCATAAAGCCATCTTTTCATCTAGCTCGCCATGCGGCGCCTACTTTT
TCCTGCCTCCCCCCTCTCCTCAACCACTCCCTGCAGCAGCGACAAAAGCT
CCTGTCGCAGCAAGACCTCCGTACTACCAGCACGACAACAGATTTCTTAT
TTTCTCCTTTTATCTACCGCCACATGCTGCTGCCTCACTTTTCTCCATTT
TTCACACTATGGGCAACACCTCTCCACCCTCCTCCCCTTCCTCCACCTGT
ACCCGGCACATACTGTCACCTCCGTCTTTGCCGTGCCTCCTGAGCCTTCC
TCTCCATACTCCTCCGACGGGTACACCCCTGACTGGGATCACGTCCTGGC
TCCACCGACCCTGCAACCCCAGACTATTCACCTCAATTTAAACCGAGACG
ACGTCACTGAAGACTTGCAAGATCTCTCCCACATTATCCTCACCACAGGC
AGCCTCCTGACAAGCACATGGCCTAATGTGATTCCCCACCTCTCCTTCTC
CCTCCGGGGTATCTATGCCCTCCTCCCTCCGAGGTATCTGTCAAAACCCC
TACTTATTCGAATGGGCGATGGAATAGATCCTGCCCCTTTTCCAGTCCTG
ACCAAAGCGAGGGTAATTAATGATAGCATGGCCATTTTGATGCCCATTGA
ATACGAAAGACATTTCGGCTATGATTTTCATAGGCTAGTGGAGCCAGAGG
AGTTTGGGGAGTCGTCTTTGACGGCGGCGGAGGCTAAGGCTGTGGGTGCT
GCTGATACTGGTGGTGCTGCTACTAGTAGTTATGCTACTGGTGGTTGGGT
CGCTGCAACGGGAAGTGGTGTTGCCGACGTTGATGAGGCTGCGACCAATG
TCGGCGCTGCCACTTCTTCCAATACTCTTTCTTTTAGCTCCTCCTCATCG
TCCTCCCCCGTGTCCTCCTCGTCCTTCTCGTCCTCCTCCCCTCCTCCCTT
CGACCCTCCCTTCCGAGAGAAGGCCCCTCAGGCCATATGGCGAGGTGTTA
CCACCGGCGGCTACGTTTGGGACCCCCTAATCCACGACAAAGACAACCAC
CGAAAAGCATTGATCGATACCTGGGGAGGGGACGTCAGCCCCAAAGTGGA
CGTGGCCTTTACGGGGTGGTGCCAGGGGGCGCAAGACTTGTGAGTATTAT
ATCATTCAATTACGTCTTAAAATGTGTTTCAAGCATTTATGTGTAATGGC
GTATATTGATGTGAACCCATTTGACTGACTAGGCGAAAGTCATGGAAGAC
CCTTGCATGTGTGAAGATTGAGAATGGGAAGCCAGTCAATCTGTGCGTGT
GTGCATGGGCACGGCGTCAGGTCTCAGGCCGTGGTGACGCGGAGCAGGAG
GCTCGTCAGTTAGTATTCGTAGTGGTAGCACGTTAGTTCTGTATGAGTCA
TTCTCCCTTCCCTTCTCCGAATGAATGCAGCCATGGACACAATTTCTTTC
TCGACCCCTTTTTATGCCTGTCTCTCATTTCATGTCCCGCCACCCAACCG
GCCTTCACACCGCAGCGTCTCCTACTGGTCGCCCTTCCTCAAGCCCTCCC
TCCCCCAAGCCGAGCAGCTCCAATACCGCTATCTCATCTCCGTCGAGGGC
AACGACGTCGCCACTGGGCTGAAGTGGATGCTGGCCAGCAACAGCGTGGT
CTTCATGCCGATGCCGCGGCGGGAGATCTGGTACAGTTCCCTCTCCCTCT
TTCCCTCCCTCCCTCCCTCTTTCCCTTCCTCTCATCCTCCCTCCGTTAGT
AGCAGCAGAGGCCTCCTTCCTACCGAAGGTCGAAAGTGCATTTAAGATCT
ACTTTCCACGATGTCCATTTCCATTTAATGATTTGAAAGGCAGCATGCTG
GAAGGGCTTAAGACAGCGGCACTGACCATTCCCTCCCTCCTTTGCTCAGG
AGCCGGGAAGGTCTGTTGATGCCCTGGGTGCATTTCATTCCCGTTCAAGC
CGATTTTTCTGACCTTCTGCTAAGGATAGAGGAGTGCGAGAGGGACCTGG
AGAGATGCGAGGCCGTAAGCGAGCGGGCAAGCAAGTACATGAAGAGCGGC
TTTGGCGACATTGACAGGACGTACGCACAAGCTGCGGCACGATTGAGAGA
ATACCTTGATAAAGTGACGATTGAAATTGTGTAGCTGAATCGAAATTAAA
GAAAAAGGCTACATATGAAGACATGAAGAGAAGAGAAGCGATAATGCACG
GCAAGTAATGAAAAAGGAAGACGGAAAATGTCATGCACCGGAA back to topCoding sequence (CDS) from alignment at chr6:186190..188482+ >NO06G00430.2 ID=NO06G00430.2|Name=NO06G00430.2|organism=Nannochloropsis oceanica|type=CDS|length=1110bp|location=Sequence derived from alignment at chr6:186190..188482+ (Nannochloropsis oceanica)
ATGCGGCGCCTACTTTTTCCTGCCTCCCCCCTCTCCTCAACCACTCCCTG
CAGCAGCGACAAAAGCTCCTGTCGCAGCAAGACCTCCGTACTACCAGCAC
GACAACAGATTTCTTATTTTCTCCTTTTATCTACCGCCACATGCTGCTGC
CTCACTTTTCTCCATTTTTCACACTATGGGCAACACCTCTCCACCCTCCT
CCCCTTCCTCCACCTGTACCCGGCACATACTGTCACCTCCGTCTTTGCCG
TGCCTCCTGAGCCTTCCTCTCCATACTCCTCCGACGGGTACACCCCTGAC
TGGGATCACGTCCTGGCTCCACCGACCCTGCAACCCCAGACTATTCACCT
CAATTTAAACCGAGACGACGTCACTGAAGACTTGCAAGATCTCTCCCACA
TTATCCTCACCACAGGCAGCCTCCTGACAAGCACATGGCCTAATGTGATT
CCCCACCTCTCCTTCTCCCTCCGGGGTATCTATGCCCTCCTCCCTCCGAG
GTATCTGTCAAAACCCCTACTTATTCGAATGGGCGATGGAATAGATCCTG
CCCCTTTTCCAGTCCTGACCAAAGCGAGGGTAATTAATGATAGCATGGCC
ATTTTGATGCCCATTGAATACGAAAGACATTTCGGCTATGATTTTCATAG
GCTAGTGGAGCCAGAGGAGTTTGGGGAGTCGTCTTTGACGGCGGCGGAGG
CTAAGGCTGTGGGTGCTGCTGATACTGGTGGTGCTGCTACTAGTAGTTAT
GCTACTGGTGGTTGGGTCGCTGCAACGGGAAGTGGTGTTGCCGACGTTGA
TGAGGCTGCGACCAATGTCGGCGCTGCCACTTCTTCCAATACTCTTTCTT
TTAGCTCCTCCTCATCGTCCTCCCCCGTGTCCTCCTCGTCCTTCTCGTCC
TCCTCCCCTCCTCCCTTCGACCCTCCCTTCCGAGAGAAGGCCCCTCAGGC
CATATGGCGAGGTGTTACCACCGGCGGCTACGTTTGGGACCCCCTAATCC
ACGACAAAGACAACCACCGAAAAGCATTGATCGATACCTGGGGAGGGGAC
GTCAGCCCCAAAGTGGACGTGGCCTTTACGGGGTGGTGCCAGGGGGCGCA
AGACTTGTGA back to top
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