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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr6 | genome | chr6:55515..59223 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO06G00120.1 vs.
Match: EWM29412.1 (Cytochrome b5, heme-binding site [Nannochloropsis gaditana]) HSP 1 Score: 515.0 bits (1325), Expect = 3.000e-142 Identity = 256/514 (49.81%), Postives = 350/514 (68.09%), Query Frame = 0
Query: 32 TTYPSPLHIPQGPSFPTVGSTPNSPQPTTMADVESIKSPGSSPSKPKGPDPLVD-VAAKPTKFQVSGKEYDPDLLWYIHGKAYDLTDWVRFHPGGQDALLNAQGRDGTALFESYHFFTDRARNLLAKMTPVEVPPEVLKKYVMDTSEANYFILPDGSYDPFWEAIRNRCKKVYEDDPSLTRTSGWGIYLFHMALLLVVQPLIFYYGYLQEWALWSHLSAFAMGIVVWIGGRLGHDAGHYAVCPKKYYSGWFTAICSGFALTNIGYWQLLHTVMHHTYTNMDNDPDLYHYVFFLRDHANYPYRILHRLQIHRIWCYIVWSATTAGLLILEPVAMLVTGSATRGTKTRLHKKRYIFWFFMIIHLFLFPAVYLALPIYLTWDTDESKYTIISTRVGSWIYFMMGSGLCFGIFSQSNHFSARCVEAATKPTSWGVRQIETAANFCINSWFWSIITAGINVQIEHHLFPSVASDKLDKLIPIVQETCKEFNVDYKNYSSFREILASVHEYLDHLAKPLP 545
T+Y +P+H ++P ST + P D E++ SPG P+ DPL + V+ P + E LWYIHG+AYDLTD++ HPGG LLN QGRD TALFE++H FTDR LLAKM V+V P++L + D S+ N+F LPDG+ DPFW A++ RC K Y + + RT W L H+ LL++QP ++++GYL + +SH +A AMG+ WI GRLGHD GH+A+ Y+ F +G L+N+ YW++LH V HHT TN + DPDLYHYV+FLRDH YP+ I HRLQ+ RI+CY VWS TTAGLL++EP+ ML+TGS TR RL K R+ FW ++ H+ LFP V L +PI+L WD++ +K +I+ R S++ + +G+ FG+FSQ NHFS CV AA++ TSW VRQ+ETAANFC++S FWS+ITAGI++QIEHHLFP ++SD++ L+PIV++TCKEF V+YKN+ +F IL+SVH Y+D LA +P
Sbjct: 10 TSYITPIH-----AYPA-RSTSSVMAPR---DEETVMSPGGDPTVK---DPLAEAVSQMPPPNSIKKNE-----LWYIHGRAYDLTDFINKHPGGPTVLLNTQGRDCTALFEAFHPFTDRPAKLLAKMKEVKVSPDILAEKCTDISQGNWFYLPDGTPDPFWAALKERCGK-YMKENKVERTMKWSTLLLHV-FLLMIQPPLWWFGYLDAYPWYSHAAAVAMGVTTWIAGRLGHDGGHFAI-SHHYWINRFFGNWAGLGLSNMSYWEILHNVDHHTDTNTEKDPDLYHYVYFLRDHPRYPWYIFHRLQVARIYCYAVWSFTTAGLLMIEPMNMLLTGSGTRPPTVRLAKFRFFFWAKLVFHMLLFPTVMLGIPIWLLWDSNPNKGVVIAVRFASFVIYCAVTGVLFGLFSQVNHFSEDCVAAASRNTSWAVRQVETAANFCVDSSFWSLITAGIHIQIEHHLFPGLSSDRVLPLVPIVEQTCKEFGVNYKNFKTFPSILSSVHAYIDTLAYRVP 503
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G00120.1 ID=NO06G00120.1|Name=NO06G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2215bp CCTCCTTGTGGAAGAGGAAAATAGAACAGCTCTTTCCTCAAAGCGTCGAA AGCTTCATGTGCTGCACGTCGCAGAGGGCTTTATATCCCTCGGAATTGAG GTCTCAACCACATTTGTGGCAGTCAACGGTGGGAGACATTGAATTGAAGT CCTTTGTCCGATCCCGCGGCTGTTCCTCCAGCCCCTCTCTCATCAGTCAC ATCAGCAGTGGCAGCAAAAGCACTACATTTTGCCGAGGCACCGCTGTTTT TCCATGCAGCTTCCTTCCTTTCTGACACAGGAGAAAATTTTCTTGTTCTC TTGTGAATCTCCCCCCCCCCTCCACGGCTCAAGACGCTCCTCTCACACAA CCTACCCTTCCCCACTTCACATACCACAAGGACCAAGCTTCCCTACAGTT GGCTCAACCCCGAATTCACCGCAGCCCACTACGATGGCCGATGTCGAGTC CATCAAATCCCCTGGCAGCTCGCCGAGCAAGCCTAAGGGGCCCGACCCGC TCGTGGACGTGGCGGCCAAGCCCACCAAATTCCAGGTCTCGGGTAAGGAA TATGACCCTGATCTGCTCTGGTATATTCATGGCAAGGCCTACGATTTGAC GGACTGGGTTCGTTTCCATCCGGGTGGGCAAGACGCCCTCCTAAATGCCC AGGGCCGCGATGGCACGGCGCTGTTTGAGTCCTACCATTTTTTCACGGAC CGGGCGCGAAATTTGCTGGCGAAAATGACGCCTGTGGAGGTGCCCCCTGA GGTGCTTAAGAAGTACGTAATGGACACATCGGAAGCCAATTATTTCATCC TCCCTGACGGATCCTACGACCCCTTTTGGGAGGCCATCCGGAACCGCTGC AAGAAGGTTTATGAAGACGATCCTTCCCTGACGCGCACGTCAGGCTGGGG TATCTACCTGTTCCACATGGCTCTGCTGCTGGTGGTGCAACCACTGATTT TCTACTATGGGTACTTGCAGGAGTGGGCGCTGTGGTCTCATTTGTCGGCG TTCGCCATGGGCATCGTCGTCTGGATCGGGGGACGCCTGGGCCATGACGC GGGTCACTACGCAGTCTGTCCCAAGAAGTATTACAGTGGATGGTTTACGG CGATATGTTCGGGATTTGCGCTGACTAACATCGGCTACTGGCAGTTGCTG CACACGGTCATGCACCACACCTACACGAATATGGACAACGATCCCGACCT TTACCATTACGTCTTCTTTTTGCGCGACCACGCCAACTACCCGTATAGGA TCCTTCATCGTCTGCAGATCCACCGCATCTGGTGCTACATCGTCTGGAGC GCCACTACCGCCGGCCTCCTGATCCTGGAGCCTGTTGCCATGCTCGTCAC GGGTTCCGCCACCCGCGGGACCAAGACACGCCTGCACAAGAAGCGATACA TCTTCTGGTTCTTCATGATTATCCACTTGTTCCTCTTCCCGGCCGTTTAC CTGGCCTTGCCCATCTATCTGACGTGGGACACGGATGAGAGCAAGTACAC TATCATCTCCACGCGCGTTGGAAGCTGGATCTACTTCATGATGGGCTCAG GATTGTGTTTCGGTATATTCTCCCAGTCAAACCATTTCTCGGCGCGCTGT GTGGAGGCGGCCACGAAGCCAACCTCGTGGGGTGTACGCCAAATCGAGAC AGCCGCCAACTTCTGCATCAACTCCTGGTTTTGGTCCATCATCACGGCAG GGATCAACGTTCAGATTGAGCACCACCTCTTCCCTTCCGTGGCGTCTGAC AAGCTCGACAAGCTTATCCCCATCGTGCAAGAGACGTGCAAGGAATTCAA CGTCGACTACAAGAATTACAGCTCCTTCCGCGAGATTTTGGCCAGCGTGC ACGAGTACCTCGACCATCTGGCCAAGCCCCTGCCTTCCGATGGTGACGTT AATGTCTTCGGCTTCCACAAGCGCAAGCAAACCAGCGCCAACGTCGCTTC TTCATAACGCGAGGGAAGGAAGGAAGAATAGAGGGAGGGAGACAAAGGAG TGGATACGAGGGCGAAAGCTGTCAGGTTGGTGGGGAGAAAGAGGAATTCT TTCTCTTTTTCGCTGGCGGCCTCCATTCTCTTTTTCCCATTTTTGCATAT TCACTAAGTGGGTATGAATGTCAAGACATGTAAAGAAAAGGAACACTAGC TCAGTGTAGAGGAGGAGGAGGCGATGCACGTTCGAAGGAGGGGAGGGAGG GAGGGAGGGAGGGAA back to topprotein sequence of NO06G00120.1 >NO06G00120.1-protein ID=NO06G00120.1-protein|Name=NO06G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=568bp MQLPSFLTQEKIFLFSCESPPPLHGSRRSSHTTYPSPLHIPQGPSFPTVG STPNSPQPTTMADVESIKSPGSSPSKPKGPDPLVDVAAKPTKFQVSGKEY DPDLLWYIHGKAYDLTDWVRFHPGGQDALLNAQGRDGTALFESYHFFTDR ARNLLAKMTPVEVPPEVLKKYVMDTSEANYFILPDGSYDPFWEAIRNRCK KVYEDDPSLTRTSGWGIYLFHMALLLVVQPLIFYYGYLQEWALWSHLSAF AMGIVVWIGGRLGHDAGHYAVCPKKYYSGWFTAICSGFALTNIGYWQLLH TVMHHTYTNMDNDPDLYHYVFFLRDHANYPYRILHRLQIHRIWCYIVWSA TTAGLLILEPVAMLVTGSATRGTKTRLHKKRYIFWFFMIIHLFLFPAVYL ALPIYLTWDTDESKYTIISTRVGSWIYFMMGSGLCFGIFSQSNHFSARCV EAATKPTSWGVRQIETAANFCINSWFWSIITAGINVQIEHHLFPSVASDK LDKLIPIVQETCKEFNVDYKNYSSFREILASVHEYLDHLAKPLPSDGDVN VFGFHKRKQTSANVASS* back to topmRNA from alignment at chr6:55515..59223+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G00120.1 ID=NO06G00120.1|Name=NO06G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=3709bp|location=Sequence derived from alignment at chr6:55515..59223+ (Nannochloropsis oceanica) CCTCCTTGTGGAAGAGGAAAATAGAACAGCTCTTTCCTCAAAGCGTCGAA
AGCTTCATGTGCTGCACGTCGCAGAGGGCTTTATATCCCTCGGAATTGAG
GTCTCAACCACATTTGTGGCAGTCAACGGTGGGAGACATTGAATTGAAGT
CCTTTGTCCGATCCCGCGGCTGTTCCTCCAGCCCCTCTCTCATCAGTCAC
ATCAGCAGTGGCAGCAAAAGCACTACATTTTGCCGAGGCACCGCTGTTTT
TCCATGCAGCTTCCTTCCTTTCTGACACAGGAGAAAATTTTCTTGTTCTC
TTGTGAATCTCCCCCCCCCCTCCACGGCTCAAGACGCTCCTCTCACACAA
CCTACCCTTCCCCACTTCACATACCACAAGGACCAAGCTTCCCTACAGTT
GGCTCAACCCCGAATTCACCGCAGCCCACTACGATGGCCGATGTCGAGTC
CATCAAATCCCCTGGCAGCTCGCCGAGCAAGCCTAAGGGGCCCGACCCGC
TCGTGGACGTGGCGGCCAAGCCCACCAAATTCCAGGTATGTAGGGAGGGG
AGGGAGGCTATGGAGGGGGAGATGTGGTGGGATGTGCAGTAGGGAAGATG
TGGAGAGTCTCTTTCATGTGTGCGCTATAGTTGTATCTCGAGGAGTGGCT
TACCATTTTGCCTTGAGTCAGACCACCTACATCATCAACAACAAGATATA
CCCACCGACACACCAACCCACCCCTACATACTCACGCATACACACATGCA
ATATACACACGCATATACCACAACATGTATTTATAATCTCCCTCCCTCCC
TATGCCCCACCGCCCCTCAGGTCTCGGGTAAGGAATATGACCCTGATCTG
CTCTGGTATATTCATGGCAAGGCCTACGATTTGACGGACTGGGTTCGTTT
CCATCCGGGTGGGCAAGACGCCCTCCTAAATGCCCAGGGCCGCGATGGCA
CGGCGCTGTTTGAGTCCTACCATTTTTTCACGGACCGGGCGCGAAATTTG
CTGGCGAAAATGACGCCTGTGGAGGTGCCCCCTGAGGTAGGTGTCGGGGG
AGGGGATGGGAGGAGATGGAGACCTTGTGCATGCTCACGTTCATGAAAGT
CATAAAATTGTTATTAATTTCAATATGTTTTTTTTTATCTTGCAGTTCGT
CCTGTGTTTGGCAGAAGCTCTTTTGCGCTCAATAGCTACGACATGGTTTT
CCTGTCGTCTCATTTCGTCTCATTATCCTCCTGTTCTGAAATCAGAATCC
ACTCATTTCACGAATCTCACACCTCTCCCCACCATCTTGCCCCCTCTCAA
AACGCATAGGTGCTTAAGAAGTACGTAATGGACACATCGGAAGCCAATTA
TTTCATCCTCCCTGACGGATCCTACGACCCCTTTTGGGAGGCCATCCGGA
ACCGCTGCAAGAAGGTTTATGAAGACGATCCTTCCCTGACGCGCACGTCA
GGCTGGGGTATCTACCTGTTCCACATGGCTCTGCTGCTGGTGGTGCAACC
ACTGATTTTCTACTATGGGTACTTGCAGGAGTGGGCGCTGTGGTCTCATT
TGTCGGCGTTCGCCATGGGCATCGTCGTCTGGATCGGGGGACGCCTGGGC
CATGACGCGGGTCACTACGCAGTCTGTCCCAAGAAGTATTACAGTGGATG
GTTTACGGCGATATGTTCGGGATTTGCGCTGACTAACATCGGGTGAGTCT
GTCGCTCGAGTCCTTGTTTTGGGTTTGGCTTAGAAGGGAAGAACGAGATC
TATCGTTGGACTCGCTGCCTGCGTATTTTCTTGAGATGCCGTGTAGACCT
TTAGCTGCAATTGGCCTCTCAGGTCTCGTCCCTGAAGGCTTTTTTCACTT
ATCACACATCTCCCTCACATTCCACTCTCCCACCTTTCCGACTGCAATAA
ATTCACACAGCTACTGGCAGTTGCTGCACACGGTCATGCACCACACCTAC
ACGAATATGGACAACGATCCCGACCTTTACCATTACGTCTTCTTTTTGCG
CGACCACGCCAACTACCCGTATAGGATCCTTCATCGTCTGCAGGTTTGTA
TGTGCGCATGTGTGCGCCTCTATAAATTTATGTATTTGTGTGTGTTTGTA
TATATATATATATTATATAATGCGTGTGTGTGTATGAATACTTGTGTTCG
GGCGCGTGGACTTTACTTAAGGGTTACGTCATGTCTTAATTTCCGTAAGC
CTCCCACATTTCTCGCTCTAACCCTAGAACGGGGAATCTTATCGAACTCC
TAAATATATACAACCAGATCCACCGCATCTGGTGCTACATCGTCTGGAGC
GCCACTACCGCCGGCCTCCTGATCCTGGAGCCTGTTGCCATGCTCGTCAC
GGGTTCCGCCACCCGCGGGACCAAGACACGCCTGCACAAGAAGCGATACA
TCTTCTGGTTCTTCATGATTATCCACTTGTTCCTCTTCCCGGCCGTTTAC
CTGGCCTTGCCCATCTATCTGACGTGGGACACGGATGAGAGCAAGTACAC
TATCATCTCCACGCGCGTTGGAAGCTGGATCTACTTCATGATGGGCTCAG
GATTGTGTTTCGGTATATTCTCCCAGGTAATGGCGATCTCGGGAGCTATG
GAGACATGAGCCTACTTTATCCACACCTACATCAATTCCACCTACTAATT
ATTCTTATAATTTTGTGGTTATATTCTCCACCGTTTCGTTTACGCTAATG
CATTCTTGTTCGCTATTTTTTCTCCCTTCCTGCAGTCAAACCATTTCTCG
GCGCGCTGTGTGGAGGCGGCCACGAAGCCAACCTCGTGGGGTGTACGCCA
AATCGAGACAGCCGCCAACTTCTGCATCAACTCCTGGTTTTGGTCCATCA
TCACGGCAGGGATCAACGTTCAGATTGAGCACCACCTCTTCCCTTCCGTG
GCGTCTGACAAGGTAGATGCATGAAAGAGAGAAAGGAAAGGAACGCAGGA
GGGTTTCGATGTCGGTCCCTTCCTCGCTTAAAAAACATTCCTGTTGCCAT
CGCTCACCTACATGCTTCCCTCTGTCCCTCCTCCCCTCGCTCCCTCGCTT
CCTCCTACCTTTCCCAGCTCGACAAGCTTATCCCCATCGTGCAAGAGACG
TGCAAGGAATTCAACGTCGACTACAAGAATTACAGCTCCTTCCGCGAGAT
TTTGGCCAGCGTGCACGAGGTACGCCCTGCCTTCTCCCTCTCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCTCTTCCTCACATCTTTCTTATATATCCC
CAGTATCACTCCCTTTAATTTTCTCTTCTTTGCGCAACTGGAACCCCCCT
CCCTTTCTCCTTATCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCCTTAGT
ACCTCGACCATCTGGCCAAGCCCCTGCCTTCCGATGGTGACGTTAATGTC
TTCGGCTTCCACAAGCGCAAGCAAACCAGCGCCAACGTCGCTTCTTCATA
ACGCGAGGGAAGGAAGGAAGAATAGAGGGAGGGAGACAAAGGAGTGGATA
CGAGGGCGAAAGCTGTCAGGTTGGTGGGGAGAAAGAGGAATTCTTTCTCT
TTTTCGCTGGCGGCCTCCATTCTCTTTTTCCCATTTTTGCATATTCACTA
AGTGGGTATGAATGTCAAGACATGTAAAGAAAAGGAACACTAGCTCAGTG
TAGAGGAGGAGGAGGCGATGCACGTTCGAAGGAGGGGAGGGAGGGAGGGA
GGGAGGGAA back to topCoding sequence (CDS) from alignment at chr6:55515..59223+ >NO06G00120.1 ID=NO06G00120.1|Name=NO06G00120.1|organism=Nannochloropsis oceanica|type=CDS|length=1704bp|location=Sequence derived from alignment at chr6:55515..59223+ (Nannochloropsis oceanica) ATGCAGCTTCCTTCCTTTCTGACACAGGAGAAAATTTTCTTGTTCTCTTG TGAATCTCCCCCCCCCCTCCACGGCTCAAGACGCTCCTCTCACACAACCT ACCCTTCCCCACTTCACATACCACAAGGACCAAGCTTCCCTACAGTTGGC TCAACCCCGAATTCACCGCAGCCCACTACGATGGCCGATGTCGAGTCCAT CAAATCCCCTGGCAGCTCGCCGAGCAAGCCTAAGGGGCCCGACCCGCTCG TGGACGTGGCGGCCAAGCCCACCAAATTCCAGGTCTCGGGTAAGGAATAT GACCCTGATCTGCTCTGGTATATTCATGGCAAGGCCTACGATTTGACGGA CTGGGTTCGTTTCCATCCGGGTGGGCAAGACGCCCTCCTAAATGCCCAGG GCCGCGATGGCACGGCGCTGTTTGAGTCCTACCATTTTTTCACGGACCGG GCGCGAAATTTGCTGGCGAAAATGACGCCTGTGGAGGTGCCCCCTGAGGT GCTTAAGAAGTACGTAATGGACACATCGGAAGCCAATTATTTCATCCTCC CTGACGGATCCTACGACCCCTTTTGGGAGGCCATCCGGAACCGCTGCAAG AAGGTTTATGAAGACGATCCTTCCCTGACGCGCACGTCAGGCTGGGGTAT CTACCTGTTCCACATGGCTCTGCTGCTGGTGGTGCAACCACTGATTTTCT ACTATGGGTACTTGCAGGAGTGGGCGCTGTGGTCTCATTTGTCGGCGTTC GCCATGGGCATCGTCGTCTGGATCGGGGGACGCCTGGGCCATGACGCGGG TCACTACGCAGTCTGTCCCAAGAAGTATTACAGTGGATGGTTTACGGCGA TATGTTCGGGATTTGCGCTGACTAACATCGGCTACTGGCAGTTGCTGCAC ACGGTCATGCACCACACCTACACGAATATGGACAACGATCCCGACCTTTA CCATTACGTCTTCTTTTTGCGCGACCACGCCAACTACCCGTATAGGATCC TTCATCGTCTGCAGATCCACCGCATCTGGTGCTACATCGTCTGGAGCGCC ACTACCGCCGGCCTCCTGATCCTGGAGCCTGTTGCCATGCTCGTCACGGG TTCCGCCACCCGCGGGACCAAGACACGCCTGCACAAGAAGCGATACATCT TCTGGTTCTTCATGATTATCCACTTGTTCCTCTTCCCGGCCGTTTACCTG GCCTTGCCCATCTATCTGACGTGGGACACGGATGAGAGCAAGTACACTAT CATCTCCACGCGCGTTGGAAGCTGGATCTACTTCATGATGGGCTCAGGAT TGTGTTTCGGTATATTCTCCCAGTCAAACCATTTCTCGGCGCGCTGTGTG GAGGCGGCCACGAAGCCAACCTCGTGGGGTGTACGCCAAATCGAGACAGC CGCCAACTTCTGCATCAACTCCTGGTTTTGGTCCATCATCACGGCAGGGA TCAACGTTCAGATTGAGCACCACCTCTTCCCTTCCGTGGCGTCTGACAAG CTCGACAAGCTTATCCCCATCGTGCAAGAGACGTGCAAGGAATTCAACGT CGACTACAAGAATTACAGCTCCTTCCGCGAGATTTTGGCCAGCGTGCACG AGTACCTCGACCATCTGGCCAAGCCCCTGCCTTCCGATGGTGACGTTAAT GTCTTCGGCTTCCACAAGCGCAAGCAAACCAGCGCCAACGTCGCTTCTTC ATAA back to top
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