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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr5 | genome | chr5:1449901..1452629 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G05400.1 vs.
Match: XP_005855505.1 (phosphoethanolamine n-methyltransferase [Nannochloropsis gaditana CCMP526]; EKU20863.1 phosphoethanolamine n-methyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 664.1 bits (1712), Expect = 4.700e-187 Identity = 354/567 (62.43%), Postives = 425/567 (74.96%), Query Frame = 0
Query: 118 TEKERAMQREYWEEHSKKQGSSMENMMLDRSAAKLDLMDRPEILSLLPPFAGTRILELASGIGRFTGSLASKAASVVTVEFMKEFLAKNKELHDHLGNCEFICSDVLTLALPPASFDVVFSCWIQMYLNDDEVRSLAARTLEWVKPGGHAFFRESCFRQSGDVSRAFNPSHYRHPSFYTSVFSQVRCRDPADGVEYGLELVRTRNLETYVAVKGNKGQICWLWRKVPVVASNTDSVPIPVAGAST-NSPGYSPIPPASALSMPYPNGSSSCGSSSSSSSQQPNA--LLAAPATGRLATHDGLFGAGFGSDRLGGAGPAAALAEALKLDGPGKKVVDWQCGMGGYGLYVAEKCGAQVWQVEERTALVEPAVENAMTKPNAYTVLEVCSLESREFDAGSVDAVLLHTSQP-SPLASASTSSLSFYKRAAEWLKPGGCVVAGLVVGSEEEAETIKAAMKQALGGEVAMTDMTPQMLEWVGKDLQAFKSSSSNSGSSNGSCNGSSSSDGRSLNEDGCPGGAAGAKARSADVGIREQGEKEVNAAVGKWWEEQLAQTKAGTVRYVVCKALKQ 681
TE+ER +QREYW+EHSKKQGSSMENMMLD SA+KLDLMDRPEILS+LP ++ RILELASGIGRFTGSLASKA SVVTVEFM+EF+AKNKELH+H GNC+F+C+DVL L LPPASFD+VFSCWIQMYLND EVR LAAR LEW KPGGH FFRESCF+QSG+V+RAFNPSHYRHPSFYTSVFS+VRC D DG+EY LELVR+RNLETY+AVKGNKGQICWLWRKVPV +S V G S N G+S + S + NG S+ + + P+A LLA PATG+LATHDGLFG GFGSDR+GGAGPA+ALA AL+L PGK+V+DWQCG+GGYGL++AEKCGA+VWQV+ERTAL+E AV+++ T P A+TVLEVC L SREFD S+DAV++HT QP SPL+S SFY RAA WL+PGG +VAGL++ + EAE + AA+ +A G EV MTDMT QM+EW+ + L A +++ NG NG +A + +EQ E+ AV +WWEEQL + KAG + Y + KA KQ
Sbjct: 7 TEEERTVQREYWQEHSKKQGSSMENMMLDDSASKLDLMDRPEILSMLPTYSDIRILELASGIGRFTGSLASKAGSVVTVEFMEEFVAKNKELHNHFGNCDFLCADVLKLTLPPASFDLVFSCWIQMYLNDQEVRVLAARKLEWCKPGGHVFFRESCFQQSGNVTRAFNPSHYRHPSFYTSVFSEVRCTDATDGIEYRLELVRSRNLETYIAVKGNKGQICWLWRKVPVTSSQARLVGNGNTGLSNGNGAGHS-----NGHSNGHSNGHSNGSKNECNGVSSPHADDLLAPPATGQLATHDGLFGPGFGSDRVGGAGPASALARALELGEPGKRVLDWQCGLGGYGLWLAEKCGAKVWQVDERTALIEGAVQHSRTLPKAHTVLEVCRLHSREFDPESLDAVIVHTPQPLSPLSS------SFYHRAAAWLRPGGRLVAGLLLETVGEAEKLLAALAKAFGQEVVMTDMTAQMVEWMEQSLTASRAAHRTVEPGNGHTNG------------------------NAHIARKEQ---ELQTAVKQWWEEQLERVKAGGLHYFLFKATKQ 535
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G05400.1 ID=NO05G05400.1|Name=NO05G05400.1|organism=Nannochloropsis oceanica|type=mRNA|length=2729bp
GTCTCGCGCAAAGACGAATTGTGTGGATGGCCTTACTTTGCATCTTCACC
TGGTACCCCCTGTGCTCATGGACAAATATACCCAGTGGCCATGATGTTGG
TGCAACAGATTGTTGCCGTCAAGGCATGATTATTTGCTGTTTTTTCGTCC
AATCAGTGCAAACTTCTTCACCTTTTTCACCACTCACCCCGACTCCCCTA
TCCTCGCTTTCACTCCAAATCTTCTCTGGAAAAGCAACATGCATGTCCTC
CAGCTTTCCAGCTCCTTCTCCTCATCCTCATAATGATCATTGTTACCACT
TGAAACAGCCAAGCCGCCGGACTCGCCCCGCTAGCCGCCCTTTCCATTCC
AGAAGAATGGCGTCCGTTCCACCAGCAACGGAGAAGGAGCGGGCTATGCA
GCGGGAGTATTGGGAGGAGCATAGTAAAAAGCAAGGGTCCAGCATGGAGA
ACATGATGTTGGACAGATCAGCGGCCAAGCTAGATCTAATGGACCGCCCT
GAGATTTTATCCTTGCTTCCTCCCTTCGCCGGCACGCGCATTCTGGAGCT
GGCCTCGGGCATCGGGCGCTTCACGGGCTCGCTTGCTAGCAAGGCGGCGA
GCGTGGTGACGGTGGAGTTCATGAAAGAATTCCTGGCCAAGAACAAGGAG
CTACACGACCACCTGGGCAACTGTGAATTTATTTGTTCGGACGTGTTGAC
CCTGGCCCTCCCCCCTGCCTCGTTCGACGTGGTTTTCTCCTGCTGGATTC
AAATGTACCTGAATGACGATGAGGTCCGCAGCCTCGCAGCCCGCACCCTG
GAATGGGTGAAGCCGGGCGGCCACGCATTCTTCCGGGAGTCGTGCTTCCG
GCAGTCGGGCGATGTCTCGCGGGCCTTCAACCCCTCCCACTACCGGCACC
CGTCTTTCTACACCTCGGTCTTCTCCCAGGTGCGGTGCCGAGATCCGGCG
GACGGCGTCGAATACGGGCTAGAGCTGGTACGTACACGCAACCTGGAAAC
ATACGTGGCGGTCAAGGGCAATAAGGGCCAAATCTGCTGGCTCTGGCGCA
AGGTACCAGTGGTCGCCTCTAATACTGACTCTGTGCCTATCCCTGTCGCG
GGCGCGAGCACCAACTCTCCCGGTTACAGCCCAATCCCGCCCGCCTCGGC
CCTTTCCATGCCCTATCCTAACGGTAGCAGCAGTTGCGGCAGTAGCAGCA
GTAGCAGCTCTCAGCAACCAAATGCCCTGCTGGCTGCCCCCGCGACGGGG
CGGCTGGCCACGCACGATGGTTTGTTCGGTGCGGGCTTTGGTAGTGACCG
GCTGGGAGGAGCAGGGCCAGCGGCGGCATTAGCGGAGGCGCTCAAACTTG
ACGGACCGGGGAAGAAGGTGGTAGACTGGCAGTGTGGTATGGGTGGGTAT
GGATTGTATGTGGCGGAGAAGTGCGGTGCTCAGGTCTGGCAGGTGGAGGA
GAGGACGGCCTTGGTGGAGCCGGCGGTGGAGAACGCCATGACCAAGCCCA
ATGCCTACACTGTCCTGGAGGTCTGTTCCTTAGAGTCTCGAGAGTTTGAT
GCCGGGAGCGTGGATGCTGTGCTGCTGCACACGTCACAGCCCTCGCCATT
GGCCTCGGCCTCCACCTCGTCCTTGTCCTTCTACAAACGTGCCGCCGAAT
GGTTAAAGCCGGGCGGGTGCGTGGTGGCGGGGCTGGTGGTGGGAAGCGAG
GAGGAGGCGGAAACAATCAAGGCTGCCATGAAGCAAGCGCTGGGCGGGGA
AGTGGCCATGACTGACATGACGCCCCAGATGTTGGAATGGGTGGGAAAGG
ATTTACAGGCTTTTAAGAGCAGCAGCAGCAACAGCGGAAGCAGCAACGGC
AGCTGCAACGGCAGCAGCAGCAGTGATGGGAGGAGCTTGAATGAGGACGG
GTGCCCAGGAGGAGCAGCAGGAGCAAAAGCAAGGTCAGCGGACGTGGGAA
TCCGGGAGCAGGGCGAGAAAGAAGTGAATGCGGCGGTGGGAAAATGGTGG
GAGGAGCAGCTGGCACAGACCAAGGCGGGCACGGTGCGCTATGTGGTCTG
TAAGGCTCTCAAGCAGCATTAGAGGAGGGTGGGGAGAGGGTAGAAGGGCT
TTCTATGGGTGGTTTCTGCTTCTTTTCCCCTACAGATCGCTGGGCAAAGA
AGGCGTGGAACCTTGCGTGATCGCGCTTCCTCTGCCAGTCGCCTGTCTCA
TTTAATGAGGGAGGGAGGGAGGGAGGGAGGGAGGTAGTGACTAACTGGTA
AGGAGGCGTCATTTGCGGACGGGAAAAAAGTGAAGACGAGAAAAGCCTAT
TGACAGGAACTCAACAGCAATACAAGAGCGACTCGACAAAATTTGTCTCT
CTGAGTGCCTGTGACTCAAGTTTGAGGAAGAAGGGGAGGGAGGGAGGGAG
GGAGGGAGTGGTGATACGGCCGCATTGATCGGTGGGCTCGTTTTTTGTTC
ACCAAAGCAGTTTACAAAGCCACGCCACGCCTTTCCACGCGTCTAAGCAC
AATGGACAGTTCCGTTATCAAACAGGGAAATCTCAGGATTTTGGGTAAAG
ATTTGGTAGGTACACTATCAGAAGACAAACTGTCAACAAAAATGCTTCTG
CTTTCGTCAACTTAGCGCACACACTTGAGCCTTAATGCCGTGTGGTAATA
TGACAATCTGAAGTAGTTTTAAAGCCCAAGCAAGTCCGCCTCGATAAAAA
GTTAATCAAATATTATGAAATAGGCTTCC back to topprotein sequence of NO05G05400.1 >NO05G05400.1-protein ID=NO05G05400.1-protein|Name=NO05G05400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=682bp
MALLCIFTWYPLCSWTNIPSGHDVGATDCCRQGMIICCFFVQSVQTSSPF
SPLTPTPLSSLSLQIFSGKATCMSSSFPAPSPHPHNDHCYHLKQPSRRTR
PASRPFHSRRMASVPPATEKERAMQREYWEEHSKKQGSSMENMMLDRSAA
KLDLMDRPEILSLLPPFAGTRILELASGIGRFTGSLASKAASVVTVEFMK
EFLAKNKELHDHLGNCEFICSDVLTLALPPASFDVVFSCWIQMYLNDDEV
RSLAARTLEWVKPGGHAFFRESCFRQSGDVSRAFNPSHYRHPSFYTSVFS
QVRCRDPADGVEYGLELVRTRNLETYVAVKGNKGQICWLWRKVPVVASNT
DSVPIPVAGASTNSPGYSPIPPASALSMPYPNGSSSCGSSSSSSSQQPNA
LLAAPATGRLATHDGLFGAGFGSDRLGGAGPAAALAEALKLDGPGKKVVD
WQCGMGGYGLYVAEKCGAQVWQVEERTALVEPAVENAMTKPNAYTVLEVC
SLESREFDAGSVDAVLLHTSQPSPLASASTSSLSFYKRAAEWLKPGGCVV
AGLVVGSEEEAETIKAAMKQALGGEVAMTDMTPQMLEWVGKDLQAFKSSS
SNSGSSNGSCNGSSSSDGRSLNEDGCPGGAAGAKARSADVGIREQGEKEV
NAAVGKWWEEQLAQTKAGTVRYVVCKALKQH* back to topmRNA from alignment at chr5:1449901..1452629- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G05400.1 ID=NO05G05400.1|Name=NO05G05400.1|organism=Nannochloropsis oceanica|type=mRNA|length=2729bp|location=Sequence derived from alignment at chr5:1449901..1452629- (Nannochloropsis oceanica)
GTCTCGCGCAAAGACGAATTGTGTGGATGGCCTTACTTTGCATCTTCACC
TGGTACCCCCTGTGCTCATGGACAAATATACCCAGTGGCCATGATGTTGG
TGCAACAGATTGTTGCCGTCAAGGCATGATTATTTGCTGTTTTTTCGTCC
AATCAGTGCAAACTTCTTCACCTTTTTCACCACTCACCCCGACTCCCCTA
TCCTCGCTTTCACTCCAAATCTTCTCTGGAAAAGCAACATGCATGTCCTC
CAGCTTTCCAGCTCCTTCTCCTCATCCTCATAATGATCATTGTTACCACT
TGAAACAGCCAAGCCGCCGGACTCGCCCCGCTAGCCGCCCTTTCCATTCC
AGAAGAATGGCGTCCGTTCCACCAGCAACGGAGAAGGAGCGGGCTATGCA
GCGGGAGTATTGGGAGGAGCATAGTAAAAAGCAAGGGTCCAGCATGGAGA
ACATGATGTTGGACAGATCAGCGGCCAAGCTAGATCTAATGGACCGCCCT
GAGATTTTATCCTTGCTTCCTCCCTTCGCCGGCACGCGCATTCTGGAGCT
GGCCTCGGGCATCGGGCGCTTCACGGGCTCGCTTGCTAGCAAGGCGGCGA
GCGTGGTGACGGTGGAGTTCATGAAAGAATTCCTGGCCAAGAACAAGGAG
CTACACGACCACCTGGGCAACTGTGAATTTATTTGTTCGGACGTGTTGAC
CCTGGCCCTCCCCCCTGCCTCGTTCGACGTGGTTTTCTCCTGCTGGATTC
AAATGTACCTGAATGACGATGAGGTCCGCAGCCTCGCAGCCCGCACCCTG
GAATGGGTGAAGCCGGGCGGCCACGCATTCTTCCGGGAGTCGTGCTTCCG
GCAGTCGGGCGATGTCTCGCGGGCCTTCAACCCCTCCCACTACCGGCACC
CGTCTTTCTACACCTCGGTCTTCTCCCAGGTGCGGTGCCGAGATCCGGCG
GACGGCGTCGAATACGGGCTAGAGCTGGTACGTACACGCAACCTGGAAAC
ATACGTGGCGGTCAAGGGCAATAAGGGCCAAATCTGCTGGCTCTGGCGCA
AGGTACCAGTGGTCGCCTCTAATACTGACTCTGTGCCTATCCCTGTCGCG
GGCGCGAGCACCAACTCTCCCGGTTACAGCCCAATCCCGCCCGCCTCGGC
CCTTTCCATGCCCTATCCTAACGGTAGCAGCAGTTGCGGCAGTAGCAGCA
GTAGCAGCTCTCAGCAACCAAATGCCCTGCTGGCTGCCCCCGCGACGGGG
CGGCTGGCCACGCACGATGGTTTGTTCGGTGCGGGCTTTGGTAGTGACCG
GCTGGGAGGAGCAGGGCCAGCGGCGGCATTAGCGGAGGCGCTCAAACTTG
ACGGACCGGGGAAGAAGGTGGTAGACTGGCAGTGTGGTATGGGTGGGTAT
GGATTGTATGTGGCGGAGAAGTGCGGTGCTCAGGTCTGGCAGGTGGAGGA
GAGGACGGCCTTGGTGGAGCCGGCGGTGGAGAACGCCATGACCAAGCCCA
ATGCCTACACTGTCCTGGAGGTCTGTTCCTTAGAGTCTCGAGAGTTTGAT
GCCGGGAGCGTGGATGCTGTGCTGCTGCACACGTCACAGCCCTCGCCATT
GGCCTCGGCCTCCACCTCGTCCTTGTCCTTCTACAAACGTGCCGCCGAAT
GGTTAAAGCCGGGCGGGTGCGTGGTGGCGGGGCTGGTGGTGGGAAGCGAG
GAGGAGGCGGAAACAATCAAGGCTGCCATGAAGCAAGCGCTGGGCGGGGA
AGTGGCCATGACTGACATGACGCCCCAGATGTTGGAATGGGTGGGAAAGG
ATTTACAGGCTTTTAAGAGCAGCAGCAGCAACAGCGGAAGCAGCAACGGC
AGCTGCAACGGCAGCAGCAGCAGTGATGGGAGGAGCTTGAATGAGGACGG
GTGCCCAGGAGGAGCAGCAGGAGCAAAAGCAAGGTCAGCGGACGTGGGAA
TCCGGGAGCAGGGCGAGAAAGAAGTGAATGCGGCGGTGGGAAAATGGTGG
GAGGAGCAGCTGGCACAGACCAAGGCGGGCACGGTGCGCTATGTGGTCTG
TAAGGCTCTCAAGCAGCATTAGAGGAGGGTGGGGAGAGGGTAGAAGGGCT
TTCTATGGGTGGTTTCTGCTTCTTTTCCCCTACAGATCGCTGGGCAAAGA
AGGCGTGGAACCTTGCGTGATCGCGCTTCCTCTGCCAGTCGCCTGTCTCA
TTTAATGAGGGAGGGAGGGAGGGAGGGAGGGAGGTAGTGACTAACTGGTA
AGGAGGCGTCATTTGCGGACGGGAAAAAAGTGAAGACGAGAAAAGCCTAT
TGACAGGAACTCAACAGCAATACAAGAGCGACTCGACAAAATTTGTCTCT
CTGAGTGCCTGTGACTCAAGTTTGAGGAAGAAGGGGAGGGAGGGAGGGAG
GGAGGGAGTGGTGATACGGCCGCATTGATCGGTGGGCTCGTTTTTTGTTC
ACCAAAGCAGTTTACAAAGCCACGCCACGCCTTTCCACGCGTCTAAGCAC
AATGGACAGTTCCGTTATCAAACAGGGAAATCTCAGGATTTTGGGTAAAG
ATTTGGTAGGTACACTATCAGAAGACAAACTGTCAACAAAAATGCTTCTG
CTTTCGTCAACTTAGCGCACACACTTGAGCCTTAATGCCGTGTGGTAATA
TGACAATCTGAAGTAGTTTTAAAGCCCAAGCAAGTCCGCCTCGATAAAAA
GTTAATCAAATATTATGAAATAGGCTTCC back to topCoding sequence (CDS) from alignment at chr5:1449901..1452629- >NO05G05400.1 ID=NO05G05400.1|Name=NO05G05400.1|organism=Nannochloropsis oceanica|type=CDS|length=2046bp|location=Sequence derived from alignment at chr5:1449901..1452629- (Nannochloropsis oceanica)
ATGGCCTTACTTTGCATCTTCACCTGGTACCCCCTGTGCTCATGGACAAA
TATACCCAGTGGCCATGATGTTGGTGCAACAGATTGTTGCCGTCAAGGCA
TGATTATTTGCTGTTTTTTCGTCCAATCAGTGCAAACTTCTTCACCTTTT
TCACCACTCACCCCGACTCCCCTATCCTCGCTTTCACTCCAAATCTTCTC
TGGAAAAGCAACATGCATGTCCTCCAGCTTTCCAGCTCCTTCTCCTCATC
CTCATAATGATCATTGTTACCACTTGAAACAGCCAAGCCGCCGGACTCGC
CCCGCTAGCCGCCCTTTCCATTCCAGAAGAATGGCGTCCGTTCCACCAGC
AACGGAGAAGGAGCGGGCTATGCAGCGGGAGTATTGGGAGGAGCATAGTA
AAAAGCAAGGGTCCAGCATGGAGAACATGATGTTGGACAGATCAGCGGCC
AAGCTAGATCTAATGGACCGCCCTGAGATTTTATCCTTGCTTCCTCCCTT
CGCCGGCACGCGCATTCTGGAGCTGGCCTCGGGCATCGGGCGCTTCACGG
GCTCGCTTGCTAGCAAGGCGGCGAGCGTGGTGACGGTGGAGTTCATGAAA
GAATTCCTGGCCAAGAACAAGGAGCTACACGACCACCTGGGCAACTGTGA
ATTTATTTGTTCGGACGTGTTGACCCTGGCCCTCCCCCCTGCCTCGTTCG
ACGTGGTTTTCTCCTGCTGGATTCAAATGTACCTGAATGACGATGAGGTC
CGCAGCCTCGCAGCCCGCACCCTGGAATGGGTGAAGCCGGGCGGCCACGC
ATTCTTCCGGGAGTCGTGCTTCCGGCAGTCGGGCGATGTCTCGCGGGCCT
TCAACCCCTCCCACTACCGGCACCCGTCTTTCTACACCTCGGTCTTCTCC
CAGGTGCGGTGCCGAGATCCGGCGGACGGCGTCGAATACGGGCTAGAGCT
GGTACGTACACGCAACCTGGAAACATACGTGGCGGTCAAGGGCAATAAGG
GCCAAATCTGCTGGCTCTGGCGCAAGGTACCAGTGGTCGCCTCTAATACT
GACTCTGTGCCTATCCCTGTCGCGGGCGCGAGCACCAACTCTCCCGGTTA
CAGCCCAATCCCGCCCGCCTCGGCCCTTTCCATGCCCTATCCTAACGGTA
GCAGCAGTTGCGGCAGTAGCAGCAGTAGCAGCTCTCAGCAACCAAATGCC
CTGCTGGCTGCCCCCGCGACGGGGCGGCTGGCCACGCACGATGGTTTGTT
CGGTGCGGGCTTTGGTAGTGACCGGCTGGGAGGAGCAGGGCCAGCGGCGG
CATTAGCGGAGGCGCTCAAACTTGACGGACCGGGGAAGAAGGTGGTAGAC
TGGCAGTGTGGTATGGGTGGGTATGGATTGTATGTGGCGGAGAAGTGCGG
TGCTCAGGTCTGGCAGGTGGAGGAGAGGACGGCCTTGGTGGAGCCGGCGG
TGGAGAACGCCATGACCAAGCCCAATGCCTACACTGTCCTGGAGGTCTGT
TCCTTAGAGTCTCGAGAGTTTGATGCCGGGAGCGTGGATGCTGTGCTGCT
GCACACGTCACAGCCCTCGCCATTGGCCTCGGCCTCCACCTCGTCCTTGT
CCTTCTACAAACGTGCCGCCGAATGGTTAAAGCCGGGCGGGTGCGTGGTG
GCGGGGCTGGTGGTGGGAAGCGAGGAGGAGGCGGAAACAATCAAGGCTGC
CATGAAGCAAGCGCTGGGCGGGGAAGTGGCCATGACTGACATGACGCCCC
AGATGTTGGAATGGGTGGGAAAGGATTTACAGGCTTTTAAGAGCAGCAGC
AGCAACAGCGGAAGCAGCAACGGCAGCTGCAACGGCAGCAGCAGCAGTGA
TGGGAGGAGCTTGAATGAGGACGGGTGCCCAGGAGGAGCAGCAGGAGCAA
AAGCAAGGTCAGCGGACGTGGGAATCCGGGAGCAGGGCGAGAAAGAAGTG
AATGCGGCGGTGGGAAAATGGTGGGAGGAGCAGCTGGCACAGACCAAGGC
GGGCACGGTGCGCTATGTGGTCTGTAAGGCTCTCAAGCAGCATTAG back to top
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