NO05G04910.1, NO05G04910.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G04910.1
Unique Name	NO05G04910.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3528
Alignment location	chr5:1271198..1277876 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1271198..1277876 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO05G04910.1 vs.
Match: OEU22872.1 (voltage activated chloride channel CLC7 type [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 841.6 bits (2173), Expect = 2.600e-240
Identity = 419/747 (56.09%), Postives = 538/747 (72.02%), Query Frame = 0

Query:  241 SLTYEPEESEVWRTHELQRVYREQSQFWTTGKKRAVKRWLLTAVTGVIIGLLGVGMTYFTQRLVRFKFRTVTGLIAEEAAGTRIFGGSFFTHLFLNSLYVLMANLTVLIEPVAAGSGIPEIKAFLNGVSLPRVVRVKTMLCKMVGVIFTVASGLPAGKEGPMVHIGAVVAAGVSQGRSSLWGVDTSFSRMQDFRNDREKRDFVSCGAASGVASAFGAPIGGVLFSLEEGASFWSSKLTYRAFLCAMLTAFTLLAIKTSEEAWGSPDATKMFSFGKFVSLKGVGGNYSVWELALFLLIGCLGGLLGACFNRVNEKLTVWRMTHVQPSPTRRCVEVLAICGAMSFLSYVLPLCWTKCTPVPSLAAMNADGWTEQERALVKQLVPFRCVPDREYNELASLFFTDSDTAIKQLFHFRETGSTHHPSFSAGALLLYFLPYFGMAIWAYGAAVPSGLFVPTLLSGAALGRLFGHVLHVMDGASGTFADSGTYALVGAAAVLGGMARMTISLTVILLEATGDMQYVLPLMLTLMAARWVGNLLGESLYDIHSRLKGYPVLEPDLPPAARKN-MIAAQIMSPQPKTFRRVDRVGVIYDTLLHTEHDCFPVINAEDGAVVVGTVLRKALCVILQHKAFAHPDAMGPEEALEARAREGRLVSPLLNWSTLERIYPRYPNINDIRITDRDRQCVVDLRPFMNTAPYCLNETASVVRAYRLFRTMGLRHLCVINSHNQVTGIITRFDLLPESLRRKYQR 987
            S  YEP+ESEVWR +  Q  +  + Q+WTTGKKRA+KRW+LT   GV+  ++     + ++ +   K+  +  L+      +     +F+    +  L   +A++ V IEPV+ GSGIPEIK +LNG+ LPRVVR+KT++CK++GV F+V+ GLP GKEGPMVH GAVVAA +SQG+++ WGVDTSFS+  DFRNDREKRDFV+CGAA+GVASAFGAPIGGVLFSLEEGAS+WS+KLT+RAF CAM T  T+ AI   +  WG  +  ++FSFG+F S+ G   NYS+WEL +F LIGCLGGL+GA FN  NE LT+WRM  V  S  RR +EV+ I   +S +S+  PL W +CT +P     +   W+ QE+ LV+ LVPF+C P +EYNE+ASL FT++DTAIKQLFHFRE G   + +FS+GAL L+F+PY  M+   YG AVPSGLFVP+LL+GAA GRL GH+LH +D  SGTFADSGTYAL+GAAAVLGGMARMTISLTVILLEATGDMQY LPLM+ LM+AR+ GN+  E LYDIH  LK  P +EP++PP A +N ++A Q+MS + K  R V+R GV+YD L   +H  FP+++   G  + GT  R  LC +LQ +AF +PD +   +  +      R +SPL+ W T+ER YPRYPNI+DI I + DR C +DLRP+ NTAPY +NETAS+ R YRLFRT+GLR LCV+N +NQV GIITR DLLPESL     R
Sbjct:   45 SHNYEPDESEVWRAYVAQVHFSNRGQWWTTGKKRALKRWILTFAVGVVQAVVATSCNFASRSMTSRKYDYIYELLNPSFVESST---AFWNFCLIQVLLCAVASMFVYIEPVSGGSGIPEIKCYLNGIDLPRVVRIKTLICKVIGVTFSVSGGLPVGKEGPMVHSGAVVAAALSQGKTTCWGVDTSFSKFSDFRNDREKRDFVACGAAAGVASAFGAPIGGVLFSLEEGASYWSTKLTWRAFFCAMTTILTIQAITNIDTWWGQTEVGRLFSFGEFNSISGGASNYSIWELPIFGLIGCLGGLIGAVFNAANEHLTIWRMKRVNHSKIRRVIEVIVISLGVSVVSFATPLIWGRCTELPQ----DMQDWSNQEKNLVESLVPFQCEPGKEYNEVASLIFTEADTAIKQLFHFREGGGEDNSTFSSGALFLFFVPYIMMSSVVYGIAVPSGLFVPSLLAGAAFGRLCGHLLHKLDHTSGTFADSGTYALMGAAAVLGGMARMTISLTVILLEATGDMQYTLPLMIVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPPVAERNEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCQHGTFPIVDTASGGTLYGTASRDMLCTLLQRRAFGNPDVLDDYDNSDTLGT--RRLSPLVQWDTIERAYPRYPNIDDIDIGEADRNCWLDLRPYANTAPYTINETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPESLTESLLR 782

The following BLAST results are available for this feature:

BLAST of NO05G04910.1 vs.

BLAST of NO05G04910.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
OEU22872.1	2.600e-240	56.09	voltage activated chloride channel CLC7 type [Frag...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G04910	NO05G04910	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04910.1	NO05G04910.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04910.1.cds1	NO05G04910.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds2	NO05G04910.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds3	NO05G04910.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds4	NO05G04910.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds5	NO05G04910.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds6	NO05G04910.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds7	NO05G04910.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds8	NO05G04910.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds9	NO05G04910.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds10	NO05G04910.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds11	NO05G04910.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds12	NO05G04910.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds13	NO05G04910.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds14	NO05G04910.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds15	NO05G04910.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds16	NO05G04910.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds17	NO05G04910.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds18	NO05G04910.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04910.1.cds19	NO05G04910.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:1271198..1277876+
coding sequence from alignment at chr5:1271198..1277876+

mRNA sequence

>NO05G04910.1 ID=NO05G04910.1|Name=NO05G04910.1|organism=Nannochloropsis oceanica|type=mRNA|length=3528bp
CCCTGTCCCGCCTAGCTCCTCAGTCTCAGGGTTAACATCTGCACGCAGGC
GAAATGGACGACGGCGACCCACTTTCTCAGCCAGCCATCCAGCTCCATCT
AGTCTCTCCGCCGCCGAAAGGCAGGAGCCTCTCCAGCAGCAGCAGCAGCA
GCAGCAGCATCATCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCAGCAGC
AGCAGGCGTAGTGCTAGCAGCACACCTCATACTGGGCAGCAACGACGGCA
GCAGCAGCACCACCACCACCAACAGCAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACACCAGCAGCAGCCGCCGCAGCAG
CAGCCGCAGCAGCCGCAGCAGGAGCGAAAGCTTCACCAGCGACATCGCAC
GCCCTCCCCGGTGGGGTTCGCCGCCGTTGCTCCGGAGGGTGGGGGTACAA
CGTCCTCGACGACCCTAGCGGCGCCGGGTAACATCATGATTTTGACCAAG
GACAGCAGCGGCAGTGTCGGAGGGGAAACAGAGGAGGAGGAGGCGCCTTT
CCTCAAAAGTGGGGCCACCTCTACGATGAAGAAGAAACACACGCCCCGCA
ACATCGCCTTCCAAGCACAGCACCAAGAACCCCTACTCCTCCCCACCTCG
GCGACACCCCCAGCAGTCGCGACAGCCGCAACAGTACAGCAGGATATGGG
AAGGTTAAGCAAATACCTCGATCCTGACCGCCATGTAGAGCGTGGGCCTT
ACCATGGCAAGACGTACCCAGATTCCTTGACTTATGAACCGGAAGAGAGC
GAAGTCTGGCGGACGCATGAGTTGCAAAGGGTCTACCGGGAGCAGAGTCA
GTTTTGGACGACGGGAAAGAAGAGGGCGGTCAAACGATGGTTGCTCACGG
CAGTCACTGGCGTCATTATCGGCCTCCTGGGAGTAGGCATGACCTACTTC
ACCCAACGGCTCGTCCGTTTCAAATTTCGAACCGTTACCGGCCTTATCGC
AGAGGAGGCAGCCGGAACGCGTATCTTTGGAGGCTCCTTCTTCACCCACC
TCTTCCTCAATTCCTTGTACGTGCTCATGGCCAACCTGACGGTGTTAATC
GAGCCCGTGGCGGCAGGGAGTGGCATCCCGGAGATCAAGGCCTTTCTGAA
CGGGGTCAGCCTGCCGAGGGTCGTGCGTGTCAAGACCATGCTCTGCAAGA
TGGTGGGCGTCATTTTCACCGTCGCGAGTGGACTACCCGCCGGGAAGGAG
GGTCCCATGGTGCACATCGGGGCGGTGGTGGCGGCCGGCGTCTCCCAGGG
TCGGAGCAGCCTCTGGGGCGTGGATACGTCTTTCTCCCGCATGCAAGACT
TCCGCAACGATCGAGAAAAGCGCGACTTCGTCTCGTGCGGCGCGGCCTCT
GGCGTGGCCTCGGCGTTTGGAGCCCCCATCGGCGGAGTGCTATTCTCGTT
GGAGGAGGGCGCGTCCTTCTGGAGTAGCAAGCTAACGTATCGTGCCTTCT
TGTGTGCCATGCTCACGGCCTTTACGCTCCTGGCGATCAAGACGTCGGAG
GAGGCGTGGGGCAGCCCCGACGCCACCAAAATGTTCTCCTTCGGGAAGTT
CGTCTCCCTCAAGGGGGTGGGCGGGAATTACAGCGTCTGGGAGCTGGCAC
TCTTCCTCCTCATCGGCTGCTTGGGCGGCCTCCTCGGGGCGTGCTTCAAT
CGGGTAAATGAGAAACTTACCGTATGGCGGATGACGCACGTCCAACCCTC
TCCGACCCGGCGGTGCGTGGAGGTGCTCGCAATATGCGGAGCCATGTCCT
TTTTATCCTACGTCTTGCCCTTGTGCTGGACTAAATGCACGCCAGTCCCG
AGCCTCGCGGCCATGAACGCCGACGGATGGACGGAGCAGGAACGGGCCCT
GGTCAAGCAGCTGGTGCCGTTCCGATGCGTCCCGGACAGGGAATACAATG
AGCTCGCCTCCCTCTTCTTCACCGACTCTGATACCGCAATCAAACAATTA
TTTCATTTCCGTGAGACGGGCTCCACGCACCACCCGTCCTTCTCCGCCGG
TGCCCTCCTCCTCTACTTCCTCCCCTACTTCGGCATGGCGATTTGGGCGT
ACGGCGCGGCCGTGCCCTCAGGCCTCTTCGTACCCACATTGCTGTCAGGA
GCGGCCTTGGGGAGGCTCTTTGGTCATGTCCTGCATGTGATGGACGGGGC
GAGTGGCACATTCGCGGACTCCGGGACGTATGCACTTGTCGGTGCTGCGG
CTGTTTTGGGTGGGATGGCGCGAATGACGATTTCATTGACGGTGATTCTT
CTAGAAGCCACGGGAGACATGCAGTACGTGTTGCCACTCATGCTCACCTT
GATGGCGGCCCGATGGGTTGGCAACCTCCTGGGAGAGTCGCTGTATGACA
TCCACTCTCGTCTTAAAGGCTACCCGGTGCTCGAGCCAGACTTGCCGCCC
GCGGCTCGGAAGAACATGATCGCCGCGCAGATCATGAGCCCGCAGCCTAA
GACATTCCGACGTGTGGACCGCGTGGGCGTCATTTACGATACGCTCCTTC
ACACGGAACACGATTGTTTCCCCGTCATTAATGCCGAGGACGGGGCCGTA
GTGGTAGGCACTGTCTTGCGCAAAGCCTTGTGCGTCATTTTGCAGCACAA
GGCTTTTGCCCATCCCGACGCTATGGGCCCGGAGGAAGCATTGGAAGCCC
GAGCGCGCGAAGGGCGGCTGGTTTCTCCCTTGTTGAACTGGTCGACGCTA
GAGAGGATTTATCCCCGTTATCCGAATATAAATGACATCCGGATCACGGA
TAGGGACCGGCAGTGCGTAGTGGACCTCAGGCCCTTCATGAACACGGCCC
CCTACTGCCTGAATGAAACGGCCTCCGTTGTTCGCGCCTACCGTTTATTC
CGTACCATGGGGCTACGGCATTTGTGCGTAATCAACAGCCACAACCAGGT
CACGGGCATCATCACCCGTTTCGATCTTCTGCCGGAGAGCTTGCGGCGCA
AGTACCAGCGTGTTGCTACAGCTGCCAGTGACACTGCTAGGACGTATTAT
TCACGGGATCGACGGCCTTCTGCTTACACTGTACCCCCCGAGAGCACCGT
ATGGACGGAGGGGAGGGAAGGAGGAGGAACAGGGGGAGGAAGGAGAGAGG
AGGAGAGAGGAGGAGGGTATGATATTGGAAATAAGGACGAGGAGGAAAGT
GAGGAGGAGGATGAGGACGGAGGGATGATGATGCGTGTATTATGATGTAG
AGGTGGAGTGAGCGCATGGGTGGACATCAGGATGTACACGTTGCCCGGCT
GGTTATGTGAATAGATTATTACCTATTACCTCAAAGGAAGATTCTCATGA
CTTGTACAGCAGAGATTGGAAGAGGTTATTAAGTGCTGATTCTCTGATAT
ATGCAACAAAAAGGAATAGAAATAAGGAAAGGTGCAGACTTTCGGCCATA
TTGCTTGCGCAAAGAAGCAAGCTTACTCACCTTATTGATTTGCTTGTGTC
AAGCCTTTTTCACATCCGCACCCTTAAA

protein sequence of NO05G04910.1

>NO05G04910.1-protein ID=NO05G04910.1-protein|Name=NO05G04910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1064bp
MDDGDPLSQPAIQLHLVSPPPKGRSLSSSSSSSSSIISSNSGSGSSSSSS
RRSASSTPHTGQQRRQQQHHHHQQQQQQQQQQQQQQQQQQQHQQQPPQQQ
PQQPQQERKLHQRHRTPSPVGFAAVAPEGGGTTSSTTLAAPGNIMILTKD
SSGSVGGETEEEEAPFLKSGATSTMKKKHTPRNIAFQAQHQEPLLLPTSA
TPPAVATAATVQQDMGRLSKYLDPDRHVERGPYHGKTYPDSLTYEPEESE
VWRTHELQRVYREQSQFWTTGKKRAVKRWLLTAVTGVIIGLLGVGMTYFT
QRLVRFKFRTVTGLIAEEAAGTRIFGGSFFTHLFLNSLYVLMANLTVLIE
PVAAGSGIPEIKAFLNGVSLPRVVRVKTMLCKMVGVIFTVASGLPAGKEG
PMVHIGAVVAAGVSQGRSSLWGVDTSFSRMQDFRNDREKRDFVSCGAASG
VASAFGAPIGGVLFSLEEGASFWSSKLTYRAFLCAMLTAFTLLAIKTSEE
AWGSPDATKMFSFGKFVSLKGVGGNYSVWELALFLLIGCLGGLLGACFNR
VNEKLTVWRMTHVQPSPTRRCVEVLAICGAMSFLSYVLPLCWTKCTPVPS
LAAMNADGWTEQERALVKQLVPFRCVPDREYNELASLFFTDSDTAIKQLF
HFRETGSTHHPSFSAGALLLYFLPYFGMAIWAYGAAVPSGLFVPTLLSGA
ALGRLFGHVLHVMDGASGTFADSGTYALVGAAAVLGGMARMTISLTVILL
EATGDMQYVLPLMLTLMAARWVGNLLGESLYDIHSRLKGYPVLEPDLPPA
ARKNMIAAQIMSPQPKTFRRVDRVGVIYDTLLHTEHDCFPVINAEDGAVV
VGTVLRKALCVILQHKAFAHPDAMGPEEALEARAREGRLVSPLLNWSTLE
RIYPRYPNINDIRITDRDRQCVVDLRPFMNTAPYCLNETASVVRAYRLFR
TMGLRHLCVINSHNQVTGIITRFDLLPESLRRKYQRVATAASDTARTYYS
RDRRPSAYTVPPESTVWTEGREGGGTGGGRREEERGGGYDIGNKDEEESE
EEDEDGGMMMRVL*

mRNA from alignment at chr5:1271198..1277876+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G04910.1 ID=NO05G04910.1|Name=NO05G04910.1|organism=Nannochloropsis oceanica|type=mRNA|length=6679bp|location=Sequence derived from alignment at chr5:1271198..1277876+ (Nannochloropsis oceanica)
CCCTGTCCCGCCTAGCTCCTCAGTCTCAGGGTTAACATCTGCACGCAGGC
GAAATGGACGACGGCGACCCACTTTCTCAGCCAGCCATCCAGCTCCATCT
AGTCTCTCCGCCGCCGAAAGGCAGGAGCCTCTCCAGCAGCAGCAGCAGCA
GCAGCAGCATCATCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCAGCAGC
AGCAGGCGTAGTGCTAGCAGCACACCTCATACTGGGCAGCAACGACGGCA
GCAGCAGCACCACCACCACCAACAGCAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACACCAGCAGCAGCCGCCGCAGCAG
CAGCCGCAGCAGCCGCAGCAGGAGCGAAAGCTTCACCAGCGACATCGCAC
GCCCTCCCCGGTGGGGTTCGCCGCCGTTGCTCCGGAGGGTGGGGGTACAA
CGTCCTCGACGACCCTAGCGGCGCCGGGTAACATCATGATTTTGACCAAG
GACAGCAGCGGCAGTGTCGGAGGGGAAACAGAGGAGGAGGAGGTGAGTGT
GACCTGTTTGAATAGAAAACAGCGCCAGGGTAGTCTACAATGCGATATGT
ATTCAAGCGGCATACACTCACACACACAAACACGCACGCAAACACGCACA
CCTACACACATACATACATACATACGTATTCACATACATACATACGTATA
CATATACGCATACACGCAAACCACTCATCCCCCAGGCGCCTTTCCTCAAA
AGTGGGGCCACCTCTACGATGAAGAAGAAACACACGCCCCGCAACATCGC
CTTCCAAGCACAGCACCAAGAACCCCTACTCCTCCCCACCTCGGCGACAC
CCCCAGCAGTCGCGACAGCCGCAACAGTACAGCAGGATATGGGAAGGTTA
AGCAAATACCTCGATCCTGACCGCCATGTAGAGGTGAGGAGGATAGGGAG
GGAGGAAAGGAGGGAAGGGAGGAGATGTTCCTGAATCGAGGTATCACTCA
CTTTATTATCGTGTTACACTCGTGTTATATCCCTCGGTTTCTTCCACTCC
TACCACGCCTATGTGCTAAAAAATCTTATAGCGTGGGCCTTACCATGGCA
AGACGTACCCAGATTCCTTGACTTATGAACCGGAAGAGAGCGAAGTCTGG
CGGACGCATGAGGTAGGGAGGGAGGAAGGAAGGAAGGGAGGGAGGAAGGG
AAGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAG
GGAGAGAGGGGAAGACTCAGAGGGGGGATTGGAAAGACTCAGAGGGGGGG
GTGAAAAGACTGGGTAACGGGGGAATTGGTAGTCTGTTGACGTCGTTTTG
TCTTCTCACGTACGACAAACACACATCCATTCAAACCAACACGTGTACGA
CAAACACACACCAATTCAAACTTATGCGCGTGGCAGTTGCAAAGGGTCTA
CCGGGAGCAGAGTCAGTTTTGGACGACGGGAAAGAAGAGGTGGGTGGGCC
TAGGGGGAGGGGACGAAGGGGAAGGGGAGAGGGAGGAATAAGACCACATT
ATCAAGGTATATCTTTCTTTTTGTTATCATCATATCATTGGCGTCTCTCT
CTCGTCATCTCATCTGTCTTGGTCACCCATTGATCGGATTACTTGCCGCC
TTATCACCTCACCTTGCCACATCTCTCTCTTTTCCTAGGGCGGTCAAACG
ATGGTTGCTCACGGCAGTCACTGGCGTCATTATCGGCCTCCTGGGAGTAG
GCATGACCTACTTCACCCAACGGCTCGTCCGTTTCAAATTTCGAACCGTT
ACCGGTACGATCCGCCCTCCCCTTCAGCCCTCCCGCCCGCTCGCCCTCCC
TCCATCCTTCCATCCATCCATTTTTCGCTTCCGAGGCTTCACAGTAGATG
TTGACCTTACTCTCCTTCGACCCCTCCCTCCCCCCCTCCCCCCAGGCCTT
ATCGCAGAGGAGGCAGCCGGAACGCGTATCTTTGGAGGCTCCTTCTTCAC
CCACCTCTTCCTCAATTCCTTGTACGTGCTCATGGCCAACCTGACGGTGT
TAATCGAGCCCGTGGCGGCAGGGAGTGGCATCCCGGAGATCAAGGCCTTT
CTGAACGGGGTCAGCCTGCCGAGGTAGGGAGGGAGGGAGGGAGGAAGGGA
GGGAGGGAGGGAGGAAGGGAGGGAGGGGTGCTTATGAACACCCAAAAAGA
CCAGCAGCATTACTCAAATACAAGACTCTGATGACTCGTTTCTTCTTTCC
CTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCGTTCTGTGTTAGGGTCGTG
CGTGTCAAGACCATGCTCTGCAAGATGGTGGGCGTCATTTTCACCGTCGC
GAGTGGACTACCCGCCGGGAAGGAGGGTCCCATGGTGCACATCGGTGCGT
TCCTTTCCTTCCTCCCTCCCTTCTTCCCTCCCGTACGATTGGATATCCCC
CCCACCCACCCACCCCGAGCCCCCCTCCACTCCTTTCTTCATTCTCCCCT
TCACCTCTCCATTCGTCTCTTCCTCTCTATATCATTCCCATCCCCCCCTC
CCGCCTGTATTCCCAGCCTCCATCCCTCCTTCCCTCCTTGACGCCCCCTC
ACACACACCCGTCATATACGTACACACATCCACATTAACAGGGGCGGTGG
TGGCGGCCGGCGTCTCCCAGGGTCGGAGCAGCCTCTGGGGCGTGGATACG
TCTTTCTCCCGCATGCAAGACTTCCGCAACGATCGAGAAAAGGTGCTCTT
CCAACCTCCTCTACCTCCCCCTTTCCCTCCATCGCTTCCTCCCTCCCTCT
CATGAAATCACGAGACGTGAGTAATTCATCCATGGCCCTCCACCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTAGCGCGACTTCGTCTCGTGCGG
CGCGGCCTCTGGCGTGGCCTCGGCGTTTGGAGCCCCCATCGGCGGAGTGC
TATTCTCGTTGGAGGAGGGCGCGTCCTTCTGGAGTAGCAAGCTAACGTAT
CGTGCCTTCTTGTGTGCCATGCTCACGGCCTTTACGGTGAGGAACACCAG
GGAGGGACGGAGGGACGGAGGGAGGGACGGAGGGACGGAGGAAGGGGAGG
AACTAAAGAAGAGCAGGACGGCAGACACACTTGACTAAGCCATCCTCCTC
TCCCTCCCTCCCTTCCCTAGCTCCTGGCGATCAAGACGTCGGAGGAGGCG
TGGGGCAGCCCCGACGCCACCAAAATGTTCTCCTTCGGGAAGTTCGTCTC
CCTCAAGGGGGTGGGCGGGAATTACAGCGTCTGGGAGCTGGCACTCTTCC
TCCTCATCGGCTGCTTGGGCGGCCTCCTCGGGGCGTGCTTCAATCGGGTA
AATGAGAAACTTACCGTATGGCGGATGACGCACGTCCAACCCTCTCCGAC
CCGGCGGTGCGTGGAGGTGCTCGCAATATGCGGAGCCATGTCCTTTTTAT
CCTACGTCTTGCCCTTGTGCTGGACTAAATGCACGCCAGTCCCGAGCCTC
GCGGCCATGAACGCCGACGGATGGACGGAGCAGGAACGGGTAAGGAGAAG
ATCGGAACGGTCTTGGCTTGGACGGGAGGGGAAGATCGGAACGGTCGTGG
CGTTGGCGGAGGTGGTTGCTGCCTGTCTGCTGACTGGTGGCTGGTCCTGT
GCGAGCGACGGAGGGAAGGAGGCAGGAAGGGAGGGGGGGAGGGAGGAAAG
GTCGCTGTCATGCTGGTATGATTAAATTTCGTTGTCACTTGTTCGAACAC
CTCCCTCCCTCCCTCCCTCCCTCCCTTAGGCCCTGGTCAAGCAGCTGGTG
CCGTTCCGATGCGTCCCGGACAGGGAATACAATGAGCTCGCCTCCCTCTT
CTTCACCGACTCTGATACCGCAATCAAACAATGTGAGATAGAAGGGAGAT
GTGAGGGAGGAAGGGAGGGAGGGAGAGAGGAACGGAGATGGGAAGAAAAT
GACACTTGGTCGAGCGATCGGTCCAAAGAGCGCCTGGTTGACCCTCCCCC
CCCCCTCCCTCCCTCCCCCGCTCCCTCCCCTCCTCCCTCCCCTAAGTATT
TCATTTCCGTGAGACGGGCTCCACGCACCACCCGTCCTTCTCCGCCGGTG
CCCTCCTCCTCTACTTCCTCCCCTACTTCGGCATGGCGATTTGGGCGTAC
GGCGCGGCCGTGCCCTCAGGCCTCTTCGTACCCACATTGCTGTCAGGAGC
GGCCTTGGGGAGGCTCTTTGGTCATGTCCTGCATGTGATGGACGGGGCGA
GTGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAATGACA
CGGACTCGCGTGCTCCCTCAGATGTGTAAGGGCGTAGGCTAACCTTCACA
TATCACATATCAAATCATACCACGATTATATCAGGCACATTCGCGGACTC
CGGGACGTATGCACTTGTCGGTGGTAAGGCAACGAAGAGCAAGCAGGGAG
GGAGGGAGGAAGGGAGGGAGGGCGAGAGAGAGGAAGGAAAGAAGGAGGAA
ATGGGAAAGCACCTGTATATTTTTTAATGCTGTTCTCACTCCTTTCTCCC
TTTCTTCCTCCCTCACTGCCTAGCTGCGGCTGTTTTGGGTGGGATGGCGC
GAATGACGATTTCATTGACGGTGATTCTTCTAGAAGCCACGGGAGACATG
CAGTACGTGTTGCCACTCATGCTCACCTTGATGGCGGCCCGATGGTACGT
GAGGAGCGGGGGACAGGAGGGACAGCGAGGGAGGGAGCAAGTCACAGCAA
CGAATGGCGGCCTGGGATCTCAGGCCCCTCCCTCCCTCCCTCTCTCCCTC
TCTCCCTCCTCCCTTCCTTCCTTCCTTCCTTTCTTGCCACTCCACCCACC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAAGGGTTGGCAACCTCCTGG
GAGAGTCGCTGTATGACATCCACTCTCGTCTTAAAGGCTACCCGGTGCTC
GAGCCAGACTTGCCGCCCGCGGCTCGGAAGAACATGATCGCCGCGCAGAT
CATGAGCCCGCAGCCTAAGGTGAGGAGGAACGACGGGAGGGAGGGAGGGA
GGGAGGGAGGGGGGGAGCTTGATAGGGATGTACGACTCTTCTTCGCACCC
ACTCACCCCTCCCTTCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTC
TAGACATTCCGACGTGTGGACCGCGTGGGCGTCATTTACGATACGCTCCT
TCACACGGAACACGATTGTTTCCCCGTCATTAATGCCGAGGACGGGGCCG
TAGTGGTAGGCACTGTCTTGCGCAAAGCCTTGTGCGTCATTTTGCAGGTG
AGGACAAGAGGGAGCGGCGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAT
AGGAGCTGGCCTCTCAGCTATGCGACATGCAATGTACTCACTGCCCTTTC
TTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTCCTTC
ACAGCACAAGGCTTTTGCCCATCCCGACGCTATGGGCCCGGAGGAAGCAT
TGGAAGCCCGAGCGCGCGAAGGGCGGCTGGTTTCTCCCTTGTTGAACTGG
TCGACGCTAGAGAGGATTTATCCCCGTTATCCGAATATAAATGACATCCG
GATCACGGATAGGGTATGGAGGGAAGGAGGGAGGAAGGAAAGGAAGGAGA
GAGAAAAGGAGGAAGGGAAGGACAGGTTAAACGCTCTCGAGCATCCTTGA
TGTATTTCCAGCACAATTGTTCATTCCTCCACCCACACTTCCCTCCCTCC
CTTCCTCCCTCGCCTTCTCCCCCCCCTCCGCAGGACCGGCAGTGCGTAGT
GGACCTCAGGCCCTTCATGAACACGGCCCCCTACTGCCTGAATGAAACGG
CCTCCGTTGTTCGCGCCTACCGTTTATTCCGTACCATGGGGCTACGGCAT
TTGTGCGTAATCAACAGCCACAACCAGGTGAGGCCTATTTACTTTTCACC
CTGTTTCTTGTCCTGAGTCTCCTCCCCTGGCATTTTTGGAACTTGACATT
GACTTTTGATTTGACTCATAATTTGTTCTTTCCTCCTTTCTCGCGCTTTC
TTTCATTTCCCCCCTCCCTCCCCCTCCTTCCCCTCCACTTGATGCCTAGG
TCACGGGCATCATCACCCGTTTCGATCTTCTGCCGGAGAGCTTGCGGCGC
AAGTACCAGCGTGTTGCTACAGCTGCCAGTGACACTGCTAGGACGTATTA
TTCACGGGATCGACGGCCTTCTGCTTACACTGTACCCCCCGAGAGCACCG
TATGGACGGAGGGGAGGGAAGGAGGAGGAACAGGGGGAGGAAGGAGAGAG
GAGGAGAGAGGAGGAGGGTATGATATTGGAAATAAGGACGAGGAGGAAAG
TGAGGAGGAGGATGAGGACGGAGGGATGATGATGCGTGTATTATGATGTA
GAGGTGGAGTGAGCGCATGGGTGGACATCAGGATGTACACGTTGCCCGGC
TGGTTATGTGAATAGATTATTACCTATTACCTCAAAGGAAGATTCTCATG
ACTTGTACAGCAGAGATTGGAAGAGGTTATTAAGTGCTGATTCTCTGATA
TATGCAACAAAAAGGAATAGAAATAAGGAAAGGTGCAGACTTTCGGCCAT
ATTGCTTGCGCAAAGAAGCAAGCTTACTCACCTTATTGATTTGCTTGTGT
CAAGCCTTTTTCACATCCGCACCCTTAAA

Coding sequence (CDS) from alignment at chr5:1271198..1277876+

>NO05G04910.1 ID=NO05G04910.1|Name=NO05G04910.1|organism=Nannochloropsis oceanica|type=CDS|length=3192bp|location=Sequence derived from alignment at chr5:1271198..1277876+ (Nannochloropsis oceanica)
ATGGACGACGGCGACCCACTTTCTCAGCCAGCCATCCAGCTCCATCTAGT
CTCTCCGCCGCCGAAAGGCAGGAGCCTCTCCAGCAGCAGCAGCAGCAGCA
GCAGCATCATCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCAGCAGCAGC
AGGCGTAGTGCTAGCAGCACACCTCATACTGGGCAGCAACGACGGCAGCA
GCAGCACCACCACCACCAACAGCAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACACCAGCAGCAGCCGCCGCAGCAGCAG
CCGCAGCAGCCGCAGCAGGAGCGAAAGCTTCACCAGCGACATCGCACGCC
CTCCCCGGTGGGGTTCGCCGCCGTTGCTCCGGAGGGTGGGGGTACAACGT
CCTCGACGACCCTAGCGGCGCCGGGTAACATCATGATTTTGACCAAGGAC
AGCAGCGGCAGTGTCGGAGGGGAAACAGAGGAGGAGGAGGCGCCTTTCCT
CAAAAGTGGGGCCACCTCTACGATGAAGAAGAAACACACGCCCCGCAACA
TCGCCTTCCAAGCACAGCACCAAGAACCCCTACTCCTCCCCACCTCGGCG
ACACCCCCAGCAGTCGCGACAGCCGCAACAGTACAGCAGGATATGGGAAG
GTTAAGCAAATACCTCGATCCTGACCGCCATGTAGAGCGTGGGCCTTACC
ATGGCAAGACGTACCCAGATTCCTTGACTTATGAACCGGAAGAGAGCGAA
GTCTGGCGGACGCATGAGTTGCAAAGGGTCTACCGGGAGCAGAGTCAGTT
TTGGACGACGGGAAAGAAGAGGGCGGTCAAACGATGGTTGCTCACGGCAG
TCACTGGCGTCATTATCGGCCTCCTGGGAGTAGGCATGACCTACTTCACC
CAACGGCTCGTCCGTTTCAAATTTCGAACCGTTACCGGCCTTATCGCAGA
GGAGGCAGCCGGAACGCGTATCTTTGGAGGCTCCTTCTTCACCCACCTCT
TCCTCAATTCCTTGTACGTGCTCATGGCCAACCTGACGGTGTTAATCGAG
CCCGTGGCGGCAGGGAGTGGCATCCCGGAGATCAAGGCCTTTCTGAACGG
GGTCAGCCTGCCGAGGGTCGTGCGTGTCAAGACCATGCTCTGCAAGATGG
TGGGCGTCATTTTCACCGTCGCGAGTGGACTACCCGCCGGGAAGGAGGGT
CCCATGGTGCACATCGGGGCGGTGGTGGCGGCCGGCGTCTCCCAGGGTCG
GAGCAGCCTCTGGGGCGTGGATACGTCTTTCTCCCGCATGCAAGACTTCC
GCAACGATCGAGAAAAGCGCGACTTCGTCTCGTGCGGCGCGGCCTCTGGC
GTGGCCTCGGCGTTTGGAGCCCCCATCGGCGGAGTGCTATTCTCGTTGGA
GGAGGGCGCGTCCTTCTGGAGTAGCAAGCTAACGTATCGTGCCTTCTTGT
GTGCCATGCTCACGGCCTTTACGCTCCTGGCGATCAAGACGTCGGAGGAG
GCGTGGGGCAGCCCCGACGCCACCAAAATGTTCTCCTTCGGGAAGTTCGT
CTCCCTCAAGGGGGTGGGCGGGAATTACAGCGTCTGGGAGCTGGCACTCT
TCCTCCTCATCGGCTGCTTGGGCGGCCTCCTCGGGGCGTGCTTCAATCGG
GTAAATGAGAAACTTACCGTATGGCGGATGACGCACGTCCAACCCTCTCC
GACCCGGCGGTGCGTGGAGGTGCTCGCAATATGCGGAGCCATGTCCTTTT
TATCCTACGTCTTGCCCTTGTGCTGGACTAAATGCACGCCAGTCCCGAGC
CTCGCGGCCATGAACGCCGACGGATGGACGGAGCAGGAACGGGCCCTGGT
CAAGCAGCTGGTGCCGTTCCGATGCGTCCCGGACAGGGAATACAATGAGC
TCGCCTCCCTCTTCTTCACCGACTCTGATACCGCAATCAAACAATTATTT
CATTTCCGTGAGACGGGCTCCACGCACCACCCGTCCTTCTCCGCCGGTGC
CCTCCTCCTCTACTTCCTCCCCTACTTCGGCATGGCGATTTGGGCGTACG
GCGCGGCCGTGCCCTCAGGCCTCTTCGTACCCACATTGCTGTCAGGAGCG
GCCTTGGGGAGGCTCTTTGGTCATGTCCTGCATGTGATGGACGGGGCGAG
TGGCACATTCGCGGACTCCGGGACGTATGCACTTGTCGGTGCTGCGGCTG
TTTTGGGTGGGATGGCGCGAATGACGATTTCATTGACGGTGATTCTTCTA
GAAGCCACGGGAGACATGCAGTACGTGTTGCCACTCATGCTCACCTTGAT
GGCGGCCCGATGGGTTGGCAACCTCCTGGGAGAGTCGCTGTATGACATCC
ACTCTCGTCTTAAAGGCTACCCGGTGCTCGAGCCAGACTTGCCGCCCGCG
GCTCGGAAGAACATGATCGCCGCGCAGATCATGAGCCCGCAGCCTAAGAC
ATTCCGACGTGTGGACCGCGTGGGCGTCATTTACGATACGCTCCTTCACA
CGGAACACGATTGTTTCCCCGTCATTAATGCCGAGGACGGGGCCGTAGTG
GTAGGCACTGTCTTGCGCAAAGCCTTGTGCGTCATTTTGCAGCACAAGGC
TTTTGCCCATCCCGACGCTATGGGCCCGGAGGAAGCATTGGAAGCCCGAG
CGCGCGAAGGGCGGCTGGTTTCTCCCTTGTTGAACTGGTCGACGCTAGAG
AGGATTTATCCCCGTTATCCGAATATAAATGACATCCGGATCACGGATAG
GGACCGGCAGTGCGTAGTGGACCTCAGGCCCTTCATGAACACGGCCCCCT
ACTGCCTGAATGAAACGGCCTCCGTTGTTCGCGCCTACCGTTTATTCCGT
ACCATGGGGCTACGGCATTTGTGCGTAATCAACAGCCACAACCAGGTCAC
GGGCATCATCACCCGTTTCGATCTTCTGCCGGAGAGCTTGCGGCGCAAGT
ACCAGCGTGTTGCTACAGCTGCCAGTGACACTGCTAGGACGTATTATTCA
CGGGATCGACGGCCTTCTGCTTACACTGTACCCCCCGAGAGCACCGTATG
GACGGAGGGGAGGGAAGGAGGAGGAACAGGGGGAGGAAGGAGAGAGGAGG
AGAGAGGAGGAGGGTATGATATTGGAAATAAGGACGAGGAGGAAAGTGAG
GAGGAGGATGAGGACGGAGGGATGATGATGCGTGTATTATGA

Synonyms

Publications