NO05G04620.1, NO05G04620.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G04620.1
Unique Name	NO05G04620.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4133
Alignment location	chr5:1202384..1206888 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1202384..1206888 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO05G04620.1 vs.
Match: EWM28002.1 (phenylalanine 4-monooxygenase [Nannochloropsis gaditana])

HSP 1 Score: 742.3 bits (1915), Expect = 1.100e-210
Identity = 392/553 (70.89%), Postives = 437/553 (79.02%), Query Frame = 0

Query:   26 MLIPRHSSGLVLSAAASMRRVTATAAAAASTVASSRLLPLTSSSSSSSFSCTPSLSSLLLHHSPLHRSILEFGRPFSSSATISSSSTTDHPNHHQHHPEAAEYVQS---AAEEGGTDAFFDKTSVLMEVEDCPGALAEMLSFFAAHNVNITRLESRPTKKQLD----GKFTFVMYLDFDGSRGEAHVDALLNELGQHTHSLLVLDKTDVPWFPRQASQLDAIANRVLDAGVDLTSEHPGFSDPVYRARRGELAEVARKYVHGEIIPRIEYTMEEVETWGAVWRRQEELLQRHACREYLDILGLMKQECGYGPQSIPQQADITTFLSRRTGFRLRPVAGLLSSRDFLNGLAFRVFFCTQYIRHHSRPLYTPEPDICHELLGHAPLFADPDFADFSNEIGLASLGASDEEVKKLASCYWHSVEFGLCKHQRQQQEEGGKEESANSGSSTIKAYGAGLLSSFGELEYACGGGKGGEGGREGGPIFLPWDPEVAAVQAYPITTYQPVYFVAESLLDAKEKMRKYCERKMSRPFFARYMPVTQSIWVDRAVRVGRKEG 572
            M + +H     LS A   R   A    +  T+  +   P   SSSS S           LH SP  +S+    R FSSS T +  ST ++PN   HHPEAAEY++    A EE   D FFDKTS LMEVED PGALAEMLS+FAAH+VNITRLESRP+KKQ D    G+  F MY+DF+GSRG A VDALL ELG+H+ SLLVLD+T+VPWFPRQA QLD IANRVLDAGVDLTS+HPGFSDPVYRARRGELA++AR+Y HGE IP I Y   E+ TW AV+RRQ+ELL+R+ACREYLDIL LMK+ECGYGP+SIPQQADIT FL+RRT FRLRPVAGLLSSRDFLNGLAFRVFFCTQYIRHHSRPLYTPEPDICHELLGHAPLFADPDFADFSNEIGLASLGASDEEVKKLA+CYWHSVEFGLC+      E    +E  N  +S+IKAYGAGLLSSFGELEYAC    GGE G+EGGP FLPWDPEVAAVQ+YPITTYQPVYFVAESLLDAKEKMR+YCE+KMSRPF+ARYMP  QSIWVDRAVRVG+K G
Sbjct:    1 MALIQHVMTKKLSRALLARHKGAPLCRSLRTLLPNEQKPPDPSSSSPS----------PLHLSPASQSLSRVWRSFSSSTT-TVVSTEEYPN--AHHPEAAEYLKRSSVAVEEDDKDPFFDKTSALMEVEDRPGALAEMLSYFAAHHVNITRLESRPSKKQYDDQGQGRLVFDMYVDFEGSRGIARVDALLQELGEHSRSLLVLDRTEVPWFPRQAWQLDTIANRVLDAGVDLTSDHPGFSDPVYRARRGELAQIARQYRHGETIPHIAYMPAEIATWSAVFRRQDELLRRYACREYLDILALMKEECGYGPESIPQQADITRFLARRTDFRLRPVAGLLSSRDFLNGLAFRVFFCTQYIRHHSRPLYTPEPDICHELLGHAPLFADPDFADFSNEIGLASLGASDEEVKKLAACYWHSVEFGLCRQHAAGTEL--SQEQGNETASSIKAYGAGLLSSFGELEYAC----GGEEGKEGGPTFLPWDPEVAAVQSYPITTYQPVYFVAESLLDAKEKMRRYCEKKMSRPFYARYMPEVQSIWVDRAVRVGKKVG 534

The following BLAST results are available for this feature:

BLAST of NO05G04620.1 vs.

BLAST of NO05G04620.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28002.1	1.100e-210	70.89	phenylalanine 4-monooxygenase [Nannochloropsis gad...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G04620	NO05G04620	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04620.1	NO05G04620.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04620.1.cds1	NO05G04620.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04620.1.cds2	NO05G04620.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04620.1.cds3	NO05G04620.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:1202384..1206888+
coding sequence from alignment at chr5:1202384..1206888+

mRNA sequence

>NO05G04620.1 ID=NO05G04620.1|Name=NO05G04620.1|organism=Nannochloropsis oceanica|type=mRNA|length=4133bp
TCTGCTTTCTTCTATCGTCATTCCCTGGCATAAAGGAACGGGTCCACATT
TGTTTCCCTGCTGCTGCCCTACTGGCTTGACATGTGTTCATTTTGCACTC
ACAGATTGGTATTTAACTGTAGTCTGACTATTACACAGAAGCTCCACCGT
TGCCGCTCTCCTACTCCCTCCCTCTCTTTATTCGCGAGAGCCACTCTTTG
TTCTTCTTCCATTACTCTGCTACCTACTAATATCCTCTCTCCCCTACTCC
CACCTACCCCTTCCTTTTCCCTTCAATTGAAGCCCCCTCCAGAAACTTAT
ACACGCTTGAAAAGTCCTTCCCGCCCCACCCAGCGACCTGCATCAGCGCA
TATACCTGCTGCGCCACCGCTCCCAAGGGCAAGGGGACCCCTCCCACTTT
GTTTGCTACATCCCCCGCAATTCCTAAATCTTTCTGCATTAACCTAGAGG
TGAATCCCCCTTGGTAGTCATTTGAGGAAGGGGCGGACGGAATAACGCCC
GGGCAGGGGTTGTAAAGTTCCGTGACCCAGGAGCGGCCGCTGGAGGAGTT
GAGGACCTGAGAGAGGGAGGGAACAAGGGAGAGTTGGCCGGGGTGAATTT
ATGTATGGGTGGGTAATGGGTCTGGCAGAGGACACGGCAGGGAGGGGAGG
AGGAATTCAGGGAGAGGGATTGAGTAACGCACCCCGTTTAAGATCAGGGG
GTCCATCCCCAAGGCCACGCCCAGACGCATAGCTTCCGCGACGCCAATCA
TATTCACTCCCAGCACTAAGTTGTTGCATATTTTGGCAACGGCCCCCGTG
CCAGGCCCGCCGCAATGGACGACCTTCTTGCCCATGTGCTTCAATATAAA
CGCCTCGGCTTTCTCGACGCTCTTCGCCTCTCCTCCCACCATGAAAGTCA
GCGTCCCGGCCTCTGCTCCCCCTATACCACCACTCACGGGGGCATCAACC
ATTTCGAGGCCTCGAGTAAGGGCTTGAGCGGCGAAGGCCTTGCTTGCCGT
GGGGTCAATGGTGCTACCATCAATTAGGAGTGTCCCTGCCTTGGCGTGTG
GGATGAGTACCTGTCCCACCACGGCTTCCACGTGCTGCGTGGCCGGGAGC
ATAGTCATGATAATTTGAGTTGTCTGCGCGATTTCCTCGACGGAGCTGGC
AAGGCGGGCGCCTTTTCCTTGGAGAATAGCCATGGCCTTCGGGTTGGTGT
CATAGATGACGACTGGGAGGTCAGTCTTGGAAAGCAAATTGCTCGCCATG
CGCGACCCCATTTGTCCCAAACCAATAAAACCCATTTTAATCGGCGATGA
AGAGTTTGAGGTGCTCTGATGGCGGCTAGTGGTAATGACAAGGGGATCGG
GAGTGCGGTCCCTCAAAAAAGGCGGCGTTCTGCAGAGAAAGGAGGAGGTC
ATGTCGCGATATAGGAGACGCCTTGCGGGACAAGGCCAGCAATTCATGAT
CAAGCTTTCACTTGAGTATATACTTGCTCGTTTCCTTTGGTGGTGCACGC
AGAATTTCCTGTACTGTATGGGGCGTGGGTATGGGTGTCAGAGTTGGGCT
TGAAGAAAAGAGGCTCTCTCCGCTGATTGGCGATGTTCGGTGCGTTGCCT
TCTCTCTAGAAGGCTTTGACACCCTCTCGATCCTATTTGAGGACAGTCCA
CAACAGCCTAGAGGCTTCTCGAGGACGTCGCTTGGTATTTCTGCCAGGCC
CCAGACGCTGGCGGCATTTTTTTGGGGCCTTCGCTTCCCTTGCCTCTTCG
TTTCCTGTTCTTTCAAGGCATGACATGCTCAATTTTCCACGCTCCCAGAC
ACAGACACAGACACAGACTTATAACCCCATCGACTCTTGTAAACATGCTA
ATTCCTCGACACTCCTCGGGTCTGGTGTTGTCAGCGGCCGCATCAATGCG
TCGCGTCACTGCCACTGCGGCTGCGGCTGCTTCTACTGTTGCTTCTTCCC
GGCTCCTCCCGCTGACGTCCTCCTCCTCTTCCTCCTCTTTCTCGTGCACC
CCATCCTTATCCTCGCTTCTCCTGCACCACAGTCCTTTGCACCGCTCCAT
TCTTGAATTTGGTCGCCCCTTTTCTTCTTCCGCCACAATCAGCAGTAGCA
GCACCACCGACCACCCCAACCACCACCAGCACCATCCCGAAGCCGCGGAA
TATGTGCAGAGTGCCGCCGAAGAAGGAGGGACTGACGCTTTTTTTGACAA
AACCTCAGTTCTGATGGAAGTGGAAGACTGTCCGGGGGCCTTGGCGGAAA
TGCTGTCCTTCTTTGCTGCCCATAATGTGAATATCACACGTTTAGAGAGC
CGTCCGACAAAGAAGCAATTGGACGGAAAATTCACCTTTGTCATGTACCT
CGATTTTGATGGCTCTCGAGGCGAAGCGCACGTCGACGCTCTATTGAATG
AATTGGGACAACACACTCATAGTCTACTGGTGTTGGATAAGACGGACGTG
CCTTGGTTTCCCCGGCAGGCCTCGCAGCTGGACGCCATTGCCAATCGGGT
GTTAGACGCAGGGGTGGACTTGACGAGTGAGCACCCGGGATTCTCTGACC
CTGTTTATCGTGCCCGACGGGGTGAGCTGGCGGAGGTGGCGAGGAAGTAT
GTGCATGGGGAGATTATTCCACGGATTGAATATACGATGGAGGAGGTGGA
GACCTGGGGAGCGGTGTGGAGAAGACAGGAGGAGTTGCTGCAGCGGCATG
CCTGTAGAGAATACCTGGATATATTGGGGTTGATGAAACAGGAGTGTGGA
TATGGGCCGCAGAGCATCCCACAACAGGCGGACATCACCACATTCTTGTC
GAGGAGGACGGGGTTTCGCTTGAGGCCCGTGGCGGGATTGTTGAGCTCGA
GGGACTTCTTGAATGGACTGGCCTTTCGCGTCTTCTTTTGTACGCAGTAT
ATCAGGCACCATTCCCGCCCGCTCTACACTCCCGAACCTGATATATGCCA
CGAGCTCCTGGGTCATGCCCCGCTATTTGCGGATCCTGATTTCGCGGACT
TTTCGAATGAAATCGGTCTCGCCTCCCTCGGTGCCTCGGACGAAGAAGTA
AAGAAACTTGCCTCCTGCTATTGGCACTCCGTGGAATTTGGTCTTTGTAA
ACATCAACGACAGCAACAGGAAGAGGGAGGGAAGGAGGAAAGCGCAAATA
GCGGCAGCAGCACCATCAAGGCCTACGGCGCTGGCTTGCTGTCCTCCTTT
GGTGAATTGGAGTATGCGTGCGGAGGCGGCAAAGGGGGAGAGGGAGGAAG
GGAGGGAGGACCGATATTCTTGCCATGGGACCCGGAGGTGGCTGCAGTAC
AGGCATATCCAATCACGACTTATCAGCCTGTGTATTTCGTAGCGGAGAGT
CTGTTAGACGCGAAGGAGAAGATGAGGAAATATTGTGAGAGGAAGATGAG
TCGCCCCTTCTTTGCCCGATACATGCCTGTAACGCAGAGTATTTGGGTGG
ACCGGGCTGTGAGGGTGGGAAGGAAAGAGGGGTAGGCTCTTGTTACTCCT
CTTTCTCCATAATCACTCGTAGGGAGGGAAGGAGGGAAGGAGATAGGGGT
GGATGAGTCAAGTATACGGAACGTTTGGATGGAGCGCGGGATGAGAGTGG
ATCGGAAGGCGAGACATGGAGGAAGGAAGCGAAGGTCATAGACACCTTTA
AGTCAAGAAGTCAAACTTCCTGACAGAGAATCAGGATGGACGGATAGAAA
GGAGAGGTAGAATGAACGGATAGAAAGGAGACTCGGGAGAATATAAATTG
AAGTCCGAAAAAAGAGAAAATTATAGTGGTGGGAAAGAAGAGAAAAACAG
AGGTTCAGCAATATATAAATTAAAAATTTTGAGGGGCGAAAAAGAGATTT
AGGAGTGTGTGGATATTGTGTCTTCCATGTAATCAGAAACAACCAATCAA
GGCAATTCTTGGTGTGTAAATTTCGAGCTACCTCAATAATGAATGTAGAA
AGGAAAGAATGATTTGTCCCCCGCATGACAGATACATACTCTGGTGCTGT
GAGAGCTATATATATTGCTCTTGCAAGCCACTCTTCATTGTCTTCTTCTT
TTTCCTGTCGGGAAAAGGCAGGCACTGTCTACCACCTTAAAACGCAAGGA
AAGCATAAACAAATCGCGACGACACCAATCAAA

protein sequence of NO05G04620.1

>NO05G04620.1-protein ID=NO05G04620.1-protein|Name=NO05G04620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp
MTCSIFHAPRHRHRHRLITPSTLVNMLIPRHSSGLVLSAAASMRRVTATA
AAAASTVASSRLLPLTSSSSSSSFSCTPSLSSLLLHHSPLHRSILEFGRP
FSSSATISSSSTTDHPNHHQHHPEAAEYVQSAAEEGGTDAFFDKTSVLME
VEDCPGALAEMLSFFAAHNVNITRLESRPTKKQLDGKFTFVMYLDFDGSR
GEAHVDALLNELGQHTHSLLVLDKTDVPWFPRQASQLDAIANRVLDAGVD
LTSEHPGFSDPVYRARRGELAEVARKYVHGEIIPRIEYTMEEVETWGAVW
RRQEELLQRHACREYLDILGLMKQECGYGPQSIPQQADITTFLSRRTGFR
LRPVAGLLSSRDFLNGLAFRVFFCTQYIRHHSRPLYTPEPDICHELLGHA
PLFADPDFADFSNEIGLASLGASDEEVKKLASCYWHSVEFGLCKHQRQQQ
EEGGKEESANSGSSTIKAYGAGLLSSFGELEYACGGGKGGEGGREGGPIF
LPWDPEVAAVQAYPITTYQPVYFVAESLLDAKEKMRKYCERKMSRPFFAR
YMPVTQSIWVDRAVRVGRKEG*

mRNA from alignment at chr5:1202384..1206888+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G04620.1 ID=NO05G04620.1|Name=NO05G04620.1|organism=Nannochloropsis oceanica|type=mRNA|length=4505bp|location=Sequence derived from alignment at chr5:1202384..1206888+ (Nannochloropsis oceanica)
TCTGCTTTCTTCTATCGTCATTCCCTGGCATAAAGGAACGGGTCCACATT
TGTTTCCCTGCTGCTGCCCTACTGGCTTGACATGTGTTCATTTTGCACTC
ACAGATTGGTATTTAACTGTAGTCTGACTATTACACAGAAGCTCCACCGT
TGCCGCTCTCCTACTCCCTCCCTCTCTTTATTCGCGAGAGCCACTCTTTG
TTCTTCTTCCATTACTCTGCTACCTACTAATATCCTCTCTCCCCTACTCC
CACCTACCCCTTCCTTTTCCCTTCAATTGAAGCCCCCTCCAGAAACTTAT
ACACGCTTGAAAAGTCCTTCCCGCCCCACCCAGCGACCTGCATCAGCGCA
TATACCTGCTGCGCCACCGCTCCCAAGGGCAAGGGGACCCCTCCCACTTT
GTTTGCTACATCCCCCGCAATTCCTAAATCTTTCTGCATTAACCTAGAGG
TGAATCCCCCTTGGTAGTCATTTGAGGAAGGGGCGGACGGAATAACGCCC
GGGCAGGGGTTGTAAAGTTCCGTGACCCAGGAGCGGCCGCTGGAGGAGTT
GAGGACCTGAGAGAGGGAGGGAACAAGGGAGAGTTGGCCGGGGTGAATTT
ATGTATGGGTGGGTAATGGGTCTGGCAGAGGACACGGCAGGGAGGGGAGG
AGGAATTCAGGGAGAGGGATTGAGTAACGCACCCCGTTTAAGATCAGGGG
GTCCATCCCCAAGGCCACGCCCAGACGCATAGCTTCCGCGACGCCAATCA
TATTCACTCCCAGCACTAAGTTGTTGCATATTTTGGCAACGGCCCCCGTG
CCAGGCCCGCCGCAATGGACGACCTTCTTGCCCATGTGCTTCAATATAAA
CGCCTCGGCTTTCTCGACGCTCTTCGCCTCTCCTCCCACCATGAAAGTCA
GCGTCCCGGCCTCTGCTCCCCCTATACCACCACTCACGGGGGCATCAACC
ATTTCGAGGCCTCGAGTAAGGGCTTGAGCGGCGAAGGCCTTGCTTGCCGT
GGGGTCAATGGTGCTACCATCAATTAGGAGTGTCCCTGCCTTGGCGTGTG
GGATGAGTACCTGTCCCACCACGGCTTCCACGTGCTGCGTGGCCGGGAGC
ATAGTCATGATAATTTGAGTTGTCTGCGCGATTTCCTCGACGGAGCTGGC
AAGGCGGGCGCCTTTTCCTTGGAGAATAGCCATGGCCTTCGGGTTGGTGT
CATAGATGACGACTGGGAGGTCAGTCTTGGAAAGCAAATTGCTCGCCATG
CGCGACCCCATTTGTCCCAAACCAATAAAACCCATTTTAATCGGCGATGA
AGAGTTTGAGGTGCTCTGATGGCGGCTAGTGGTAATGACAAGGGGATCGG
GAGTGCGGTCCCTCAAAAAAGGCGGCGTTCTGCAGAGAAAGGAGGAGGTC
ATGTCGCGATATAGGAGACGCCTTGCGGGACAAGGCCAGCAATTCATGAT
CAAGCTTTCACTTGAGTATATACTTGCTCGTTTCCTTTGGTGGTGCACGC
AGAATTTCCTGTACTGTATGGGGCGTGGGTATGGGTGTCAGAGTTGGGCT
TGAAGAAAAGAGGCTCTCTCCGCTGATTGGCGATGTTCGGTGCGTTGCCT
TCTCTCTAGAAGGCTTTGACACCCTCTCGATCCTATTTGAGGACAGTCCA
CAACAGCCTAGAGGCTTCTCGAGGACGTCGCTTGGTATTTCTGCCAGGCC
CCAGACGCTGGCGGCATTTTTTTGGGGCCTTCGCTTCCCTTGCCTCTTCG
TTTCCTGTTCTTTCAAGGCATGACATGCTCAATTTTCCACGCTCCCAGAC
ACAGACACAGACACAGACTTATAACCCCATCGACTCTTGTAAACATGCTA
ATTCCTCGACACTCCTCGGGTCTGGTGTTGTCAGCGGCCGCATCAATGCG
TCGCGTCACTGCCACTGCGGCTGCGGCTGCTTCTACTGTTGCTTCTTCCC
GGCTCCTCCCGCTGACGTCCTCCTCCTCTTCCTCCTCTTTCTCGTGCACC
CCATCCTTATCCTCGCTTCTCCTGCACCACAGTCCTTTGCACCGCTCCAT
TCTTGAATTTGGTCGCCCCTTTTCTTCTTCCGCCACAATCAGCAGTAGCA
GCACCACCGACCACCCCAACCACCACCAGCACCATCCCGAAGCCGCGGAA
TATGTGCAGAGTGCCGCCGAAGAAGGAGGGACTGACGCTTTTTTTGACAA
AACCTCAGTTCTGATGGAAGTGGAAGACTGTCCGGGGGCCTTGGCGGAAA
TGCTGTCCTTCTTTGCTGCCCATAATGTGAATATCACACGTTTAGAGAGC
CGTCCGACAAAGAAGCAATTGGACGGAAAATTCACCTTTGTCATGTACCT
CGATTTTGATGGCTCTCGAGGCGAAGCGCACGTCGACGCTCTATTGAATG
AATTGGGACAACACACTCATAGTCTACTGGTGTTGGATAAGACGGACGTG
CCTTGGTTTCCCCGGCAGGCCTCGCAGCTGGACGCCATTGCCAATCGGGT
GTTAGACGCAGGGGTGGACTTGACGAGTGAGCACCCGGGATTCTCTGACC
CTGTTTATCGTGCCCGACGGGGTGAGCTGGCGGAGGTGGCGAGGAAGTAT
GTGCATGGGGAGATTATTCCACGGATTGAATATACGATGGAGGAGGTGGA
GACCTGGGGAGCGGTGTGGAGAAGACAGGAGGAGTTGCTGCAGCGGCATG
CCTGTAGAGAATACCTGGATATATTGGGGTTGATGAAACAGGAGTGTGGA
TATGGGCCGCAGAGCATCCCACAACAGGCGGACATCACCACATTCTTGTC
GAGGAGGACGGGGTTTCGCTTGAGGCCCGTGGCGGGATTGTTGAGCTCGA
GGGACTTCTTGAATGGACTGGCCTTTCGCGTCTTCTTTTGTACGCAGTAT
ATCAGGTGAATGAGGAGAAAATATTGATTCCGCCTCCTATCCACGTGACC
TTAACCCCTTCCCTTTGTTGGCACCGGTTTGTCGCTTACTGCAGTGCCAG
CTCTTACGCTCATCGGAGACCGTCACTCCCTCACCTATTCCCCTCCTCTG
ACAATCCCACAAACACGCATACCAAAAGGCACCATTCCCGCCCGCTCTAC
ACTCCCGAACCTGATATATGCCACGAGCTCCTGGGTCATGCCCCGCTATT
TGCGGATCCTGATTTCGCGGACTTTTCGAATGGTGAGGATGGGTTGAGAG
GGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGTAAG
ATTGACTCGCTCTGCGCTGCGCATGAAGCGAATGCAGACGCTTGTCTTAT
TAATCCAATTGCATCATTTCCCCTCCTACGGTCCTTTCATCTACCACCCT
CCCTCCCTCTCTCTTTCCCTCCCTCCCTTAGAAATCGGTCTCGCCTCCCT
CGGTGCCTCGGACGAAGAAGTAAAGAAACTTGCCTCCTGCTATTGGCACT
CCGTGGAATTTGGTCTTTGTAAACATCAACGACAGCAACAGGAAGAGGGA
GGGAAGGAGGAAAGCGCAAATAGCGGCAGCAGCACCATCAAGGCCTACGG
CGCTGGCTTGCTGTCCTCCTTTGGTGAATTGGAGTATGCGTGCGGAGGCG
GCAAAGGGGGAGAGGGAGGAAGGGAGGGAGGACCGATATTCTTGCCATGG
GACCCGGAGGTGGCTGCAGTACAGGCATATCCAATCACGACTTATCAGCC
TGTGTATTTCGTAGCGGAGAGTCTGTTAGACGCGAAGGAGAAGATGAGGA
AATATTGTGAGAGGAAGATGAGTCGCCCCTTCTTTGCCCGATACATGCCT
GTAACGCAGAGTATTTGGGTGGACCGGGCTGTGAGGGTGGGAAGGAAAGA
GGGGTAGGCTCTTGTTACTCCTCTTTCTCCATAATCACTCGTAGGGAGGG
AAGGAGGGAAGGAGATAGGGGTGGATGAGTCAAGTATACGGAACGTTTGG
ATGGAGCGCGGGATGAGAGTGGATCGGAAGGCGAGACATGGAGGAAGGAA
GCGAAGGTCATAGACACCTTTAAGTCAAGAAGTCAAACTTCCTGACAGAG
AATCAGGATGGACGGATAGAAAGGAGAGGTAGAATGAACGGATAGAAAGG
AGACTCGGGAGAATATAAATTGAAGTCCGAAAAAAGAGAAAATTATAGTG
GTGGGAAAGAAGAGAAAAACAGAGGTTCAGCAATATATAAATTAAAAATT
TTGAGGGGCGAAAAAGAGATTTAGGAGTGTGTGGATATTGTGTCTTCCAT
GTAATCAGAAACAACCAATCAAGGCAATTCTTGGTGTGTAAATTTCGAGC
TACCTCAATAATGAATGTAGAAAGGAAAGAATGATTTGTCCCCCGCATGA
CAGATACATACTCTGGTGCTGTGAGAGCTATATATATTGCTCTTGCAAGC
CACTCTTCATTGTCTTCTTCTTTTTCCTGTCGGGAAAAGGCAGGCACTGT
CTACCACCTTAAAACGCAAGGAAAGCATAAACAAATCGCGACGACACCAA
TCAAA

Coding sequence (CDS) from alignment at chr5:1202384..1206888+

>NO05G04620.1 ID=NO05G04620.1|Name=NO05G04620.1|organism=Nannochloropsis oceanica|type=CDS|length=1716bp|location=Sequence derived from alignment at chr5:1202384..1206888+ (Nannochloropsis oceanica)
ATGACATGCTCAATTTTCCACGCTCCCAGACACAGACACAGACACAGACT
TATAACCCCATCGACTCTTGTAAACATGCTAATTCCTCGACACTCCTCGG
GTCTGGTGTTGTCAGCGGCCGCATCAATGCGTCGCGTCACTGCCACTGCG
GCTGCGGCTGCTTCTACTGTTGCTTCTTCCCGGCTCCTCCCGCTGACGTC
CTCCTCCTCTTCCTCCTCTTTCTCGTGCACCCCATCCTTATCCTCGCTTC
TCCTGCACCACAGTCCTTTGCACCGCTCCATTCTTGAATTTGGTCGCCCC
TTTTCTTCTTCCGCCACAATCAGCAGTAGCAGCACCACCGACCACCCCAA
CCACCACCAGCACCATCCCGAAGCCGCGGAATATGTGCAGAGTGCCGCCG
AAGAAGGAGGGACTGACGCTTTTTTTGACAAAACCTCAGTTCTGATGGAA
GTGGAAGACTGTCCGGGGGCCTTGGCGGAAATGCTGTCCTTCTTTGCTGC
CCATAATGTGAATATCACACGTTTAGAGAGCCGTCCGACAAAGAAGCAAT
TGGACGGAAAATTCACCTTTGTCATGTACCTCGATTTTGATGGCTCTCGA
GGCGAAGCGCACGTCGACGCTCTATTGAATGAATTGGGACAACACACTCA
TAGTCTACTGGTGTTGGATAAGACGGACGTGCCTTGGTTTCCCCGGCAGG
CCTCGCAGCTGGACGCCATTGCCAATCGGGTGTTAGACGCAGGGGTGGAC
TTGACGAGTGAGCACCCGGGATTCTCTGACCCTGTTTATCGTGCCCGACG
GGGTGAGCTGGCGGAGGTGGCGAGGAAGTATGTGCATGGGGAGATTATTC
CACGGATTGAATATACGATGGAGGAGGTGGAGACCTGGGGAGCGGTGTGG
AGAAGACAGGAGGAGTTGCTGCAGCGGCATGCCTGTAGAGAATACCTGGA
TATATTGGGGTTGATGAAACAGGAGTGTGGATATGGGCCGCAGAGCATCC
CACAACAGGCGGACATCACCACATTCTTGTCGAGGAGGACGGGGTTTCGC
TTGAGGCCCGTGGCGGGATTGTTGAGCTCGAGGGACTTCTTGAATGGACT
GGCCTTTCGCGTCTTCTTTTGTACGCAGTATATCAGGCACCATTCCCGCC
CGCTCTACACTCCCGAACCTGATATATGCCACGAGCTCCTGGGTCATGCC
CCGCTATTTGCGGATCCTGATTTCGCGGACTTTTCGAATGAAATCGGTCT
CGCCTCCCTCGGTGCCTCGGACGAAGAAGTAAAGAAACTTGCCTCCTGCT
ATTGGCACTCCGTGGAATTTGGTCTTTGTAAACATCAACGACAGCAACAG
GAAGAGGGAGGGAAGGAGGAAAGCGCAAATAGCGGCAGCAGCACCATCAA
GGCCTACGGCGCTGGCTTGCTGTCCTCCTTTGGTGAATTGGAGTATGCGT
GCGGAGGCGGCAAAGGGGGAGAGGGAGGAAGGGAGGGAGGACCGATATTC
TTGCCATGGGACCCGGAGGTGGCTGCAGTACAGGCATATCCAATCACGAC
TTATCAGCCTGTGTATTTCGTAGCGGAGAGTCTGTTAGACGCGAAGGAGA
AGATGAGGAAATATTGTGAGAGGAAGATGAGTCGCCCCTTCTTTGCCCGA
TACATGCCTGTAACGCAGAGTATTTGGGTGGACCGGGCTGTGAGGGTGGG
AAGGAAAGAGGGGTAG

Synonyms

Publications