NO05G04390.1, NO05G04390.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G04390.1
Unique Name	NO05G04390.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4599
Alignment location	chr5:1131520..1138364 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1131520..1138364 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G04390.1 vs.
Match: EWM27955.1 (glucose sorbosone dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1513.0 bits (3916), Expect = 0.000e+0
Identity = 708/932 (75.97%), Postives = 801/932 (85.94%), Query Frame = 0

Query:    1 MHISVLGIALVLATLWSSSRAQVKISQPDLKLQTVWDNIWGVVQVVFLADGKVMTVHKTGELHVYKSIQSKAQDYVTLLDIKDEVYSWWDHGLLSATLHPQFPQQPYLYIAYSSEFPGRSWGDQCEPDPKKVGMTNPPDTRPYCKTMAKLVRLKVDADLTTAVVDQELFRDWCSSTYTHHVGTMNWLEDGSMVYGAGDGSHFQGLDHGMPQDECTDPKGPKDQGVFSSQKDAYLRGKFLRIKPASVLKKDYLKEWVDFVQISKGARNPFRSVVDPKNGDLYFGDVGSSVWEEINRIPNPLAADYTKKNFGWPCVEGNNAVSEIYQTWLRAEGLLSTCQDVYDGNFNKPVYSYRYGAVDPDFPDECTEADASVSGITFYTGDKLPTRYQGKMFFVDYSKKCGFWFDQAGDGSPDFSHAHAFMTTAGAQAGGVTDVKTGLDGYLYVVDYAGGKLYRFSDANDARTDALATGGQAEEEGGETAMWIESTPNTYNWQYGDVVTYKLMTPPGSPPLDPKNVTWRVTNGHCVKNPCTGTNDCHVHEVSLSTDSLTGLSGSFRPSPHPMESFINILARVGMPDGSTQKVEFTSHALSYNYKLTSDPPGLPIIIEEFVCLASPCITSQMAKTNPGFAAQNVQVYQDEIYKFSYWTATSVSTNKVKKVSRTIFEETADGDYTVQAHYQKTNMAGVDDPLLGIPENVMAEGDYERVSLKWDAPTPGPNSPDFIIISIKDAATGLLVKDHMTTAAKGNVVLPLPTAAAAYTVDMSYLSSAKNVRGVRSPPLPFQTQAALTKGTAACLAGTQFTESLHKSTREGLGDLYQIGVLGTYPTTLTQGQKVRLTFGVVSETATQLMVNILKKDDFTWAAGKIVNVPAKTNKLMNVEFTVMSEIRNKEEYFIDALLLQDAKDYKTALVEDTSANRIFGVDIPDAVGVTA 933
            M +S+LG  LV ATLWS S AQVK SQ DLKLQTVWDNIWGVVQVVFLADGKV+TVHK GELHVY S+++K+QDYVTLLDIKD+VYSWWDHGLLSA+ HPQFPQQPYLYIAYSSE PG  W DQC PDP+KV MTNPPDTRPYCKTMAKLVRLKVD DLT+A  DQELF+DWCSSTYTHHVGT+NWLEDGSM+YGAGDGSHFQGLDHG PQDECTDPKGPKDQGVF++QKDAYLRGKFL I PA+VLK  YL+   D+ QISKG+RNPFR+ VDPK GD+Y GDVGSSVWEEINRIPNPL+ DY K NFGWPCVEG +AVS+IYQTWLRAEGLL+TCQDVYDGNF KPV+SYRYGAVDPDFPDEC EADAS+SGITFYTGDKLP R+Q K+F+VDYSKKCGFWFDQ  DG+PDFSHAHAFMTT GAQAGGVTD+KTG DGYLYVVDYAGGKLYRF   +D R DAL  GG  E   G+T MWIE+ P+TYNWQYGD+VTY+LMTPPG P +DP  V WRVTNGHCVKNPCTG+NDCH HEVSL+ DSLTG+ GSFRPSPHPMESFI IL  V MPDGST+KVEFT+HAL+YNYKLTSDPPGLPIII+EF CL SPCITSQMAKTNPGFAAQNVQV+QDEIYKF +W ATSVST + K V+RTI+EETADGDY V+A Y KT MA +DDP LG+P NV A+G++ERVS+ W+   PGPN+PDFI ISI+DA T  LVK+HMTTAAKG VVLPLP+A A YTVDMS++SS++N RG+R+ P+ F ++A LT G  ACLAGTQF E L  S   GLGD YQI +LGTYPTTL QGQ+VRLTF VVS TA+QLMVNIL K+D++W AGK+VN+PAKT +++ V+FT+ +E+ +K EYFIDALL+QDAKDY +ALVEDTSA  I G+ +PDA  V A
Sbjct:    1 MRVSLLGTVLVSATLWSLSTAQVKTSQGDLKLQTVWDNIWGVVQVVFLADGKVLTVHKPGELHVYNSVEAKSQDYVTLLDIKDQVYSWWDHGLLSASFHPQFPQQPYLYIAYSSESPGNPWQDQCVPDPRKVAMTNPPDTRPYCKTMAKLVRLKVDPDLTSAKFDQELFQDWCSSTYTHHVGTINWLEDGSMIYGAGDGSHFQGLDHGQPQDECTDPKGPKDQGVFTAQKDAYLRGKFLHISPAAVLKNGYLQGDQDYTQISKGSRNPFRTTVDPKTGDIYIGDVGSSVWEEINRIPNPLSPDYRKPNFGWPCVEGVDAVSDIYQTWLRAEGLLATCQDVYDGNFTKPVFSYRYGAVDPDFPDECKEADASISGITFYTGDKLPYRFQNKLFWVDYSKKCGFWFDQTADGTPDFSHAHAFMTTTGAQAGGVTDIKTGTDGYLYVVDYAGGKLYRFGATDDTRMDALMNGGGPEAVVGDTKMWIETAPSTYNWQYGDLVTYQLMTPPGFPAIDPDKVKWRVTNGHCVKNPCTGSNDCHFHEVSLTKDSLTGMKGSFRPSPHPMESFIKILGTVEMPDGSTEKVEFTTHALAYNYKLTSDPPGLPIIIDEFTCLVSPCITSQMAKTNPGFAAQNVQVFQDEIYKFDHWVATSVSTGRAKVVARTIYEETADGDYAVEARYVKTKMAAIDDPTLGVPANVQADGEFERVSVTWEPHAPGPNAPDFITISIRDATTHELVKEHMTTAAKGAVVLPLPSAPADYTVDMSWVSSSRNARGIRTLPVAFSSKAELTTGKLACLAGTQFAEELKSSPIAGLGDQYQIALLGTYPTTLAQGQQVRLTFDVVSATASQLMVNILDKNDYSWLAGKVVNIPAKTERIVVVDFTIDTEVTHKAEYFIDALLIQDAKDYTSALVEDTSAGGIVGIAVPDATPVAA 932

The following BLAST results are available for this feature:

BLAST of NO05G04390.1 vs.

BLAST of NO05G04390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27955.1	0.000e+0	75.97	glucose sorbosone dehydrogenase [Nannochloropsis g...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G04390	NO05G04390	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04390.1	NO05G04390.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04390.1.cds1	NO05G04390.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds2	NO05G04390.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds3	NO05G04390.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds4	NO05G04390.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds5	NO05G04390.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds6	NO05G04390.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds7	NO05G04390.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds8	NO05G04390.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds9	NO05G04390.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds10	NO05G04390.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04390.1.cds11	NO05G04390.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:1131520..1138364-
coding sequence from alignment at chr5:1131520..1138364-

mRNA sequence

>NO05G04390.1 ID=NO05G04390.1|Name=NO05G04390.1|organism=Nannochloropsis oceanica|type=mRNA|length=4599bp
GTTTTCCCTCACTGAGATTTTGGGTCCCATTGCGCATGGCCACGCCTCCC
CTCTCTCTCTATGAGATTGCTTGGGTATCTGCGGAATTGCGTCGAAATGG
TCGTAACACCGGAACAACGCGTTTGTCATCGTTCTCAAGGATCGGACGTC
GTGTTGCGCCCGCGCCCCCCGCATTCCTCCACTCGCCTAACTATCTCGCT
CCGCCCTCGCTATACATCCACGCCTACAGGCAGTCATGCATATCAGCGTA
CTAGGCATAGCCCTGGTTCTGGCCACATTGTGGTCTTCGTCTAGGGCGCA
GGTCAAGATCAGCCAACCAGACTTAAAGCTTCAGACGGTCTGGGACAACA
TATGGGGTGTCGTTCAAGTGGTATTTCTCGCGGACGGCAAAGTCATGACG
GTGCATAAGACGGGCGAGTTGCATGTGTACAAGAGTATACAAAGCAAGGC
GCAGGACTACGTGACCCTGCTAGATATTAAGGATGAGGTGTACTCCTGGT
GGGACCACGGCCTCCTTTCCGCCACCCTCCATCCTCAATTCCCTCAACAG
CCCTATCTCTACATCGCGTACTCCTCCGAGTTTCCCGGCCGCTCCTGGGG
AGATCAATGCGAGCCCGACCCCAAAAAGGTGGGGATGACCAACCCTCCCG
ACACTCGACCCTACTGCAAGACCATGGCGAAGCTCGTCCGACTCAAGGTG
GATGCGGACTTGACCACCGCCGTGGTCGATCAGGAGCTGTTCCGTGACTG
GTGCAGCAGTACGTACACCCACCACGTGGGTACAATGAATTGGCTCGAGG
ACGGCAGTATGGTGTACGGCGCGGGGGATGGATCGCATTTTCAGGGCCTT
GACCACGGTATGCCGCAAGACGAATGCACAGATCCCAAGGGTCCCAAAGA
CCAGGGCGTTTTCAGCTCCCAAAAGGACGCGTATCTCCGGGGAAAATTCC
TTCGGATTAAACCCGCCTCCGTCCTCAAGAAGGACTACCTGAAGGAATGG
GTAGACTTCGTCCAGATCAGCAAAGGGGCGCGAAACCCGTTCCGATCCGT
TGTGGACCCGAAGAATGGGGACTTGTACTTCGGGGACGTCGGTTCGAGTG
TGTGGGAGGAGATCAATCGGATTCCTAACCCCCTAGCGGCTGATTATACA
AAGAAGAATTTCGGCTGGCCGTGTGTGGAGGGCAATAACGCCGTGAGCGA
GATCTATCAGACGTGGCTGCGTGCGGAAGGCTTGCTCTCCACCTGCCAAG
ATGTTTACGACGGGAACTTCAACAAACCGGTCTACTCCTACCGGTATGGA
GCGGTCGACCCCGACTTTCCCGATGAGTGCACAGAGGCGGACGCCTCCGT
CAGTGGGATCACTTTTTATACAGGCGACAAGCTCCCGACAAGATACCAGG
GCAAGATGTTCTTTGTCGATTACAGCAAAAAATGCGGTTTCTGGTTCGAT
CAGGCCGGCGATGGCTCTCCTGATTTCTCGCACGCCCACGCCTTCATGAC
CACCGCGGGGGCACAGGCCGGCGGCGTGACCGACGTCAAGACCGGCTTGG
ACGGGTACTTGTATGTGGTGGACTATGCAGGGGGCAAGCTGTACCGGTTT
TCGGACGCGAACGACGCTAGGACAGATGCCCTGGCGACGGGGGGACAGGC
GGAGGAGGAGGGCGGCGAGACTGCCATGTGGATTGAGTCGACCCCAAACA
CCTACAACTGGCAATACGGCGATGTGGTGACTTACAAATTAATGACCCCG
CCCGGGTCCCCTCCTCTGGATCCCAAGAACGTGACGTGGCGCGTGACCAA
TGGGCATTGTGTGAAGAATCCGTGCACCGGCACCAACGACTGCCACGTCC
ACGAGGTCTCCCTCTCCACTGACAGCCTAACGGGCCTCAGTGGGTCGTTC
CGTCCCTCCCCCCACCCCATGGAGAGCTTCATCAACATTCTTGCCCGCGT
GGGCATGCCAGACGGGAGCACCCAGAAGGTGGAATTTACTTCGCACGCCC
TGTCGTACAACTACAAGTTGACGTCCGATCCCCCCGGGCTGCCCATCATC
ATCGAGGAGTTCGTCTGCCTGGCCTCCCCCTGCATCACGTCGCAGATGGC
TAAGACCAACCCGGGATTCGCGGCGCAGAACGTACAAGTGTACCAAGACG
AAATCTACAAATTCAGTTACTGGACTGCCACCAGCGTCAGCACCAACAAG
GTCAAGAAAGTATCCCGTACCATCTTCGAAGAGACCGCCGACGGCGACTA
CACCGTGCAAGCCCACTACCAAAAAACCAATATGGCGGGCGTCGACGATC
CTCTCCTCGGGATCCCTGAGAATGTTATGGCCGAAGGCGACTATGAGCGC
GTTTCACTGAAGTGGGATGCACCCACCCCTGGGCCAAATTCGCCCGATTT
CATAATAATTAGCATCAAAGATGCCGCTACCGGTCTCCTCGTCAAGGATC
ACATGACCACCGCTGCCAAAGGGAACGTGGTCCTCCCCCTCCCCACCGCT
GCCGCAGCCTATACCGTTGATATGTCCTACCTTTCTTCCGCCAAAAACGT
CCGAGGGGTCCGCTCGCCTCCTCTACCCTTCCAAACTCAAGCCGCGCTGA
CCAAGGGAACGGCCGCCTGTCTGGCCGGGACTCAATTTACCGAGAGCCTC
CACAAATCGACAAGAGAGGGCTTGGGAGACTTGTATCAGATCGGAGTGCT
GGGCACATACCCCACCACCCTGACCCAAGGGCAGAAGGTCCGCCTGACAT
TCGGGGTGGTGTCGGAGACGGCCACTCAATTGATGGTGAACATCTTGAAG
AAGGATGATTTCACCTGGGCAGCGGGCAAGATTGTCAATGTTCCCGCGAA
GACAAACAAGTTGATGAACGTCGAGTTTACGGTCATGAGTGAGATCCGGA
ACAAGGAAGAGTACTTCATAGATGCCCTTCTCCTGCAAGATGCGAAGGAC
TACAAAACGGCCCTTGTCGAAGACACCTCTGCCAACCGAATATTCGGAGT
AGATATACCAGACGCTGTCGGGGTCACCGCTGCCGGCGCCACCACAGCCG
CTACTGCAGCTGCTGCTGCCTCTGGGCAACAGCAGCCACCCCGGCCATTG
GAAGGAGCAGCGGGAACAGGAGCAGGAGTAGGGATGCCGGGGGCGCCACT
GCAGCCGGCAGCAGTGGTAGCGGCCGCGAATCCTTAAGGATCATCTGTGG
TTCGAGGGAGAGAGGGATGGTTGGAGAGAGGGATCTTGTGGTACATTTGT
TTTTATGCGACCCGGACATAGAGAGAGAAGACGCACTGAAGACGCAGTGA
AGAAGGAAGAAGATAACCAAATAAAAGAGGAAAAAAATAGGAGAATCAGA
AGCAGAAGGAGATGAAACAGAAGTAGAGACAGATACAATTAGAGAGAGTG
TGTATGTGCGAGAGAAAGCAATCCGGGTGGATTTCGTCGACATTTGCAGT
AGCAGATATTTGTACAAGAGAGAGCTGACATGAGCAAGGGATGAAGAGAC
GGATGGTGCAAGGAAGGGTTTGAAGGAGGCAAAGTGAAAGCAGATAGGCG
TGCTCTTTGCTATAGACTAAAGGAGGCTGTACGGGTAGGAAGGAAACTTC
AGTGGCAGCGCAAGAAACACATATGCGCATGGGGAAAAATGACGAGACGG
AGAAGGGTGGAAGTTAGGGTGTCTATACTAAGTCCTTATAGTACCAAGTG
AGAGCACACTTCAATTCCACTGACTACTTTGGGTGTACACACCGAAGAGG
GGAACGAAAAGGACGAGAAAGAGGAAGAAGAGGAGCGAGAGGAGGACTTC
AGTTCCATCTCCTTTACTGTTCATAGTCTCTTGTTCCTGATTTTCTCGGT
TCTTGCGCACTTTGGTGTGAAAGAGTTTGACTGCTGGTGTGTGCGTGTTA
CGATTGCACCATGGGTGCATGAGTGCGTGTGTGTCTTTTCTGTGGGTGCG
CTGATCTGCCAAAATCCAGAACGGAAAAGGCGGAAATTTATGTATGTCTC
GTCAACCGTAAGAGATCTCGACATGGTGACAACGCGGGATTTTTAGCAGT
ATTAAAAGTTTTCGCAACAAACAGCAGACAGGAGAGGAATGTATGAGAGG
AAAGAATGAGCGTTGGGCAGAGCAGAGAAGCGTGAAAAAAATACCCAATC
AGCCACAGTAAAGCAGGGCAAGGTAAACATGAAGGTAAGTGAGAATAATC
AAACACATGACGAAAATGAAGTTGAAGAGAGAGCAGGAGATACAGAGGGA
GACTGACACAGTGAGAGAGAGAGAGAGAGAGACAGAGAAAGAGAGAGCTC
ACAAGGATGAGAAGGCGAATAAAGGCGGAAATTTGTTTCAAAAGATGGTG
TTGGGCCGTTGACGATGCATGGGATGTTCTCTTTCACCTAACTCTTGATC
CGTCCTAGTGGAGTGGATGAGGGGGGAAGAGCACGCACTATTGCAGTGGT
GTTTGTTTCCGTTCGTCCCTGAATGTGGTCCTGCTCACAAGTACGCTCAA
ACGGGCATGAAGTCGTCACGAGAGCCTCAAGGACTGAGCAAAGACGACAA
GAGACGAAACGAAACACTCATCTCAATGCAACAACAACATGGGCTTTCG

protein sequence of NO05G04390.1

>NO05G04390.1-protein ID=NO05G04390.1-protein|Name=NO05G04390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=984bp
MHISVLGIALVLATLWSSSRAQVKISQPDLKLQTVWDNIWGVVQVVFLAD
GKVMTVHKTGELHVYKSIQSKAQDYVTLLDIKDEVYSWWDHGLLSATLHP
QFPQQPYLYIAYSSEFPGRSWGDQCEPDPKKVGMTNPPDTRPYCKTMAKL
VRLKVDADLTTAVVDQELFRDWCSSTYTHHVGTMNWLEDGSMVYGAGDGS
HFQGLDHGMPQDECTDPKGPKDQGVFSSQKDAYLRGKFLRIKPASVLKKD
YLKEWVDFVQISKGARNPFRSVVDPKNGDLYFGDVGSSVWEEINRIPNPL
AADYTKKNFGWPCVEGNNAVSEIYQTWLRAEGLLSTCQDVYDGNFNKPVY
SYRYGAVDPDFPDECTEADASVSGITFYTGDKLPTRYQGKMFFVDYSKKC
GFWFDQAGDGSPDFSHAHAFMTTAGAQAGGVTDVKTGLDGYLYVVDYAGG
KLYRFSDANDARTDALATGGQAEEEGGETAMWIESTPNTYNWQYGDVVTY
KLMTPPGSPPLDPKNVTWRVTNGHCVKNPCTGTNDCHVHEVSLSTDSLTG
LSGSFRPSPHPMESFINILARVGMPDGSTQKVEFTSHALSYNYKLTSDPP
GLPIIIEEFVCLASPCITSQMAKTNPGFAAQNVQVYQDEIYKFSYWTATS
VSTNKVKKVSRTIFEETADGDYTVQAHYQKTNMAGVDDPLLGIPENVMAE
GDYERVSLKWDAPTPGPNSPDFIIISIKDAATGLLVKDHMTTAAKGNVVL
PLPTAAAAYTVDMSYLSSAKNVRGVRSPPLPFQTQAALTKGTAACLAGTQ
FTESLHKSTREGLGDLYQIGVLGTYPTTLTQGQKVRLTFGVVSETATQLM
VNILKKDDFTWAAGKIVNVPAKTNKLMNVEFTVMSEIRNKEEYFIDALLL
QDAKDYKTALVEDTSANRIFGVDIPDAVGVTAAGATTAATAAAAASGQQQ
PPRPLEGAAGTGAGVGMPGAPLQPAAVVAAANP*

mRNA from alignment at chr5:1131520..1138364-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G04390.1 ID=NO05G04390.1|Name=NO05G04390.1|organism=Nannochloropsis oceanica|type=mRNA|length=6845bp|location=Sequence derived from alignment at chr5:1131520..1138364- (Nannochloropsis oceanica)
GTTTTCCCTCACTGAGATTTTGGGTCCCATTGCGCATGGCCACGCCTCCC
CTCTCTCTCTATGAGATTGCTTGGGTATCTGCGGAATTGCGTCGAAATGG
TCGTAACACCGGAACAACGCGTTTGTCATCGTTCTCAAGGATCGGACGTC
GTGTTGCGCCCGCGCCCCCCGCATTCCTCCACTCGCCTAACTATCTCGCT
CCGCCCTCGCTATACATCCACGCCTACAGGCAGTCATGCATATCAGCGTA
CTAGGCATAGCCCTGGTTCTGGCCACATTGTGGTCTTCGTCTAGGGCGCA
GGTAAGCTTGGAGGGGTGAGAAAGACGACAAGGGTGAGGAGGAGCGAGGC
GGGAGGTCAGTCAATATAGTGGATTTGTCCACGGCTGACTTGACGCTGCC
AGCAGCGCAGACCTGCCAGACTCGAGTATCCTCCACAATATCCTATTATA
TATCATCATCTTCACCTTAATGAAAATGTGCCGGGCGTGGGGAGTCTGGC
TGAGCTGGTCTCGCCTCCGCCGACGTGAGTCAATCCCCGACTCCATATGT
CCGTGGGCTCTAGACAGAGGATAGCGCTAGTTTGACCCCCATTTGACAGC
TTTCATGCACCCCCCTCCTTATACCCCTCACTGAACTAAAATCTCCTCTA
TCCATATCCGGCGTGCTCCTTCCACCCAATGTCCCCATCCTCCATCGCTC
CCTCATGGTCTTTTTTGATTCATGATTTTTGTATACACCCTCATCCCATA
ATCTCGTCCCTTCTACCTCTGTTCGTCCAGGTCAAGATCAGCCAACCAGA
CTTAAAGCTTCAGACGGTCTGGGACAACATATGGGGTGTCGTTCAAGTGG
TATTTCTCGCGGACGGCAAAGTCATGACGGTGCATAAGACGGGCGAGTTG
CATGTGTACAAGAGTATACAAAGCAAGGCGCAGGTAGCATTACGGAAGGG
GAGAGGAAGGGAGGAGAGGAAGGTGGATGGTGATAGTATGGGAAAATGAT
AAAGTGTCCACGAGCTCTCTCTGACCATCCGCTTCCCCCTTCCTTTCCTT
GCTCCATGAAGGACTACGTGACCCTGCTAGATATTAAGGATGAGGTGTAC
TCCTGGTGGGACCACGGCCTCCTTTCCGCCACCCTCCATCCTCAATTCCC
TCAACAGCCCTATCTCTACATCGCGGTAAGTTCGAGAGGGAATAATAGTC
ATTAGACGGTCCAAAACAGAGGGAGGAAAACGGGAGCGAAAAAGGGAGGA
ATAGAGGTCAGAAGGACGGGAGGGAACAAGGGCCACGACACGCGACTGCC
TAGTTTGCGGTGAATATGAGCGGAAGGTTGGGAAAGAGGGAGGGGGGGAG
GGAGGGATAGAAGGAGTGGAGACGGGGAGGTAGGGAGGCCCTGTGTCACG
ACGACCAAGACTCCCGATCGCCAAGGGTGCTTTCAGTTCTCATCACCTCA
CTCTCCCTCCTTTTTAACCTTTGTTCTTTCGTCCTTGACCACATCTCGGA
GAGATCTCTTCAAGTTCCGGGCCTTTCTGTACCTTACTCTTCCTCCCTCC
CTCCCTCTCTCCCTTCTTGGCTCGCTCCCTCCCTCAGTACTCCTCCGAGT
TTCCCGGCCGCTCCTGGGGAGATCAATGCGAGCCCGACCCCAAAAAGGTG
GGGATGACCAACCCTCCCGACACTCGACCCTACTGCAAGACCATGGCGAA
GCTCGTCCGACTCAAGGTAGGTCCTCCCTCCCTTCCTCCCTCCCTCCCTC
CCCCTCTTTTCCTCTATTTTCGACCACGCGTCCCTCTTGTTCTTTATCCT
TTCCTCCCGCGCCAACCCTCCCTCCTGCCTCCCCCCCTGCCTAGGTGGAT
GCGGACTTGACCACCGCCGTGGTCGATCAGGAGCTGTTCCGTGACTGGTG
CAGCAGTACGTACACCCACCACGTGGGTACAATGAATTGGCTCGAGGACG
GCAGTATGGTGTACGGCGCGGGGGATGGATCGCATTTTCAGGTACACCGG
CTGCTTCATCGTGTTTGTCCCCCTTTTGCCCTTCCTCTGTCTTCCGGGTC
GGGCGTATGAAAGTGAGCTCGACGAACGAGCAAGCCGGAAAACGGTGGTG
GCATATGGTGCATGCCATGCCTTGCATTCCTCGGTGCCTGAGGAAGGGAA
GGAGGGAGGGAAGGAGGGAGAGGCGACAGATGAAATCAGTGCGAAATACA
AACACTGAGCGCCCCTCTCCCCTTCTCCCCTCTTCTCCGTCCTTCCCTCC
TTCTCTCCCTCCCAGGGCCTTGACCACGGTATGCCGCAAGACGAATGCAC
AGATCCCAAGGGTCCCAAAGACCAGGGCGTTTTCAGCTCCCAAAAGGACG
CGTATCTCCGGGGAAAATTCCTTCGGATTAAACCCGCCTCCGTCCTCAAG
AAGGACTACCTGAAGGAATGGGTAGACTTCGTCCAGATCAGCAAAGGGGC
GCGAAACCCGTTCCGATCCGTTGTGGACCCGAAGAATGGGGACTTGTACT
TCGGGGACGTCGGTTCGAGTGTGTGGGAGGAGATCAATCGGATTCCTAAC
CCCCTAGCGGCTGATTATACAAAGAAGAATTTCGGTGAGATAATGGAGAG
AAAGAGAGGGAGGGAGTGCAGGAGGGAAGGGTGTAATATTCTTGACAGGT
GCGACAGATTTTATCCATAAATCTTGGCTGCTTAACTCACCCCTTCTCTC
CCTCCCTCCTCCCCTTCCTCCCTCGCTTCCTCCAGGCTGGCCGTGTGTGG
AGGGCAATAACGCCGTGAGCGAGATCTATCAGACGTGGCTGCGTGCGGAA
GGCTTGCTCTCCACCTGCCAAGATGTTTACGACGGGAACTTCAACAAACC
GGTCTACTCCTACCGGTACATCTCTCCCACCCACCTCTCTCACTGCTTCC
TCCAAGATCCATCCAGTCCTTTTCCCTCCCCTCCATCCAGCCTTCTCACT
CTCCCTCCCTCCCTCCTTCCCTCCTTGCTGCAGGTATGGAGCGGTCGACC
CCGACTTTCCCGATGAGTGCACAGAGGCGGACGCCTCCGTCAGTGGGATC
ACTTTTTATACAGGTATGTAATGCCTCCCTCCTTTCCTCCCCTTCCTTCC
CACCTTCTCTTCCCTTCGTCCTCCCTGAGACTTACTCCTTGACATTTCCC
ACTTGCTACTCCTTCGTACGTGGTTATGACGAGATACATTCATACTCACC
TTTCCTCCCTCCCTCCCTTTTTCCATTCCTTTTTCAGGCGACAAGCTCCC
GACAAGATACCAGGGCAAGATGTTCTTTGTCGATTACAGCAAAAAATGCG
GTTTCTGGTTCGATCAGGCCGGCGATGGCTCTCCTGATTTCTCGCACGCC
CACGCCTTCATGACCACCGCGGGGGCACAGGCCGGCGGCGTGACCGACGT
CAAGACCGGCTTGGACGGGTACTTGTATGTGGTGGACTATGCAGGGGGCA
AGCTGTACCGGTTTTCGGACGCGAACGACGCTAGGACAGATGCCCTGGCG
ACGGGGGGACAGGCGGAGGAGGAGGGCGGCGAGACTGCCATGTGGATTGA
GTCGACCCCAAACACCTACAACTGGCAATACGGCGATGTGGTGACTTACA
AATTAATGACCCCGCCCGGGTCCCCTCCTCTGGATCCCAAGAACGTGACG
TGGCGCGTGACCAATGGGCATTGTGTGAAGAATCCGTGCACCGGCACCAA
CGACTGCCACGTCCACGAGGTCTCCCTCTCCACTGACAGCCTAACGGGCC
TCAGTGGGTCGTTCCGTCCCTCCCCCCACCCCATGGAGAGCTTCATCAAC
ATTCTTGCCCGCGTGGGCATGCCAGACGGGAGCACCCAGAAGGTGGAATT
TACTTCGCACGCCCTGTCGTACAACTACAAGTTGACGTCCGATCCCCCCG
GGCTGCCCATCATCATCGAGGAGTTCGTCTGCCTGGCCTCCCCCTGCATC
ACGTCGCAGATGGCTAAGACCAACCCGGGATTCGCGGCGCAGAACGTACA
AGTGTAAGTGCTGCTCTTGCCCTTTCTTTCTCTCCTCCTCCCTCTCTCCC
TCTATCTCTCTCTCTCTGTCTGGCCAGTGTCGCGGTCTCTACCGTGCCTT
CCCTCCCTCCTTCCCTCCCTCCCCTCGCCCAGGTACCGAGTGAAATTCCA
CGCATTGAAGACCTAGACTGCCAGCAGCGTCACCCTTTAACAAGAACGAG
TGTCTGCACACTCACGCTCGCTCCCCTCCACCCCCCCTCCCTCTCTCCCG
CCCTTACCTCCATCAGGTACCAAGACGAAATCTACAAATTCAGTTACTGG
ACTGCCACCAGCGTCAGCACCAACAAGGTCAAGAAAGTATCCCGTACCAT
CTTCGAAGAGACCGCCGACGGCGACTACACCGTGCAAGCCCACTACCAAA
AAACCAATATGGCGGGCGTCGACGATCCTCTCCTCGGGATCCCTGAGAAT
GTTATGGCCGAAGGCGACTATGAGCGCGTTTCACTGAAGTGGGATGCACC
CACCCCTGGGCCAAATTCGCCCGATTTCATAATAATTAGCATCAAAGATG
CCGCTACCGGTCTCCTCGTCAAGGATCACATGACCACCGCTGCCAAAGGG
AACGTGGTCCTCCCCCTCCCCACCGCTGCCGCAGCCTATACCGTTGATAT
GTCCTACCTTTCTTCCGCCAAAAACGTCCGAGGGGTCCGCTCGCCTCCTC
TACCCTTCCAAACTCAAGCCGCGCTGACCAAGGGAACGGCCGCCTGTCTG
GCCGGGACTCAATTTACCGAGAGCCTCCACAAATCGACAAGAGAGGGCTT
GGGAGACTTGTATCAGATCGGAGTGCTGGGCACATACCCCACCACCCTGA
CCCAAGGGCAGAAGGTCCGCCTGACATTCGGGGTGGTGTCGGAGACGGCC
ACTCAATTGATGGTGAACATCTTGAAGAAGGATGATTTCACCTGGGCAGC
GGGCAAGATTGTCAATGTTCCCGCGAAGACAAACAAGTTGATGAACGTCG
AGTTTACGGTCATGAGTGAGGTACGTGCCTTTTGTCCCTCCCTCCCCTCC
TCCCTCTCTACTCTTTCTATGCTTCTTTCCGTCGATAAATGCACAGGTAG
CAATGCCTTAACCTCGCTCCCTCCCTCCCTCCTTCGCAGATCCGGAACAA
GGAAGAGTACTTCATAGATGCCCTTCTCCTGCAAGATGCGAAGGACTACA
AAACGGCCCTTGTCGAAGACACCTCTGCCAACCGAATATTCGGAGTAGAT
ATACCAGACGCTGTCGGGGTCACCGCTGCCGGCGCCACCACAGCCGCTAC
TGCAGCTGCTGCTGCCTCTGGGCAACAGCAGCCACCCCGGCCATTGGAAG
GAGCAGCGGGAACAGGAGCAGGAGTAGGGATGCCGGGGGCGCCACTGCAG
CCGGCAGCAGTGGTAGCGGCCGCGAATCCTTAAGGATCATCTGTGGTTCG
AGGGAGAGAGGGATGGTTGGAGAGAGGGATCTTGTGGTACATTTGTTTTT
ATGCGACCCGGACATAGAGAGAGAAGACGCACTGAAGACGCAGTGAAGAA
GGAAGAAGATAACCAAATAAAAGAGGAAAAAAATAGGAGAATCAGAAGCA
GAAGGAGATGAAACAGAAGTAGAGACAGATACAATTAGAGAGAGTGTGTA
TGTGCGAGAGAAAGCAATCCGGGTGGATTTCGTCGACATTTGCAGTAGCA
GATATTTGTACAAGAGAGAGCTGACATGAGCAAGGGATGAAGAGACGGAT
GGTGCAAGGAAGGGTTTGAAGGAGGCAAAGTGAAAGCAGATAGGCGTGCT
CTTTGCTATAGACTAAAGGAGGCTGTACGGGTAGGAAGGAAACTTCAGTG
GCAGCGCAAGAAACACATATGCGCATGGGGAAAAATGACGAGACGGAGAA
GGGTGGAAGTTAGGGTGTCTATACTAAGTCCTTATAGTACCAAGTGAGAG
CACACTTCAATTCCACTGACTACTTTGGGTGTACACACCGAAGAGGGGAA
CGAAAAGGACGAGAAAGAGGAAGAAGAGGAGCGAGAGGAGGACTTCAGTT
CCATCTCCTTTACTGTTCATAGTCTCTTGTTCCTGATTTTCTCGGTTCTT
GCGCACTTTGGTGTGAAAGAGTTTGACTGCTGGTGTGTGCGTGTTACGAT
TGCACCATGGGTGCATGAGTGCGTGTGTGTCTTTTCTGTGGGTGCGCTGA
TCTGCCAAAATCCAGAACGGAAAAGGCGGAAATTTATGTATGTCTCGTCA
ACCGTAAGAGATCTCGACATGGTGACAACGCGGGATTTTTAGCAGTATTA
AAAGTTTTCGCAACAAACAGCAGACAGGAGAGGAATGTATGAGAGGAAAG
AATGAGCGTTGGGCAGAGCAGAGAAGCGTGAAAAAAATACCCAATCAGCC
ACAGTAAAGCAGGGCAAGGTAAACATGAAGGTAAGTGAGAATAATCAAAC
ACATGACGAAAATGAAGTTGAAGAGAGAGCAGGAGATACAGAGGGAGACT
GACACAGTGAGAGAGAGAGAGAGAGAGACAGAGAAAGAGAGAGCTCACAA
GGATGAGAAGGCGAATAAAGGCGGAAATTTGTTTCAAAAGATGGTGTTGG
GCCGTTGACGATGCATGGGATGTTCTCTTTCACCTAACTCTTGATCCGTC
CTAGTGGAGTGGATGAGGGGGGAAGAGCACGCACTATTGCAGTGGTGTTT
GTTTCCGTTCGTCCCTGAATGTGGTCCTGCTCACAAGTACGCTCAAACGG
GCATGAAGTCGTCACGAGAGCCTCAAGGACTGAGCAAAGACGACAAGAGA
CGAAACGAAACACTCATCTCAATGCAACAACAACATGGGCTTTCG

Coding sequence (CDS) from alignment at chr5:1131520..1138364-

>NO05G04390.1 ID=NO05G04390.1|Name=NO05G04390.1|organism=Nannochloropsis oceanica|type=CDS|length=2952bp|location=Sequence derived from alignment at chr5:1131520..1138364- (Nannochloropsis oceanica)
ATGCATATCAGCGTACTAGGCATAGCCCTGGTTCTGGCCACATTGTGGTC
TTCGTCTAGGGCGCAGGTCAAGATCAGCCAACCAGACTTAAAGCTTCAGA
CGGTCTGGGACAACATATGGGGTGTCGTTCAAGTGGTATTTCTCGCGGAC
GGCAAAGTCATGACGGTGCATAAGACGGGCGAGTTGCATGTGTACAAGAG
TATACAAAGCAAGGCGCAGGACTACGTGACCCTGCTAGATATTAAGGATG
AGGTGTACTCCTGGTGGGACCACGGCCTCCTTTCCGCCACCCTCCATCCT
CAATTCCCTCAACAGCCCTATCTCTACATCGCGTACTCCTCCGAGTTTCC
CGGCCGCTCCTGGGGAGATCAATGCGAGCCCGACCCCAAAAAGGTGGGGA
TGACCAACCCTCCCGACACTCGACCCTACTGCAAGACCATGGCGAAGCTC
GTCCGACTCAAGGTGGATGCGGACTTGACCACCGCCGTGGTCGATCAGGA
GCTGTTCCGTGACTGGTGCAGCAGTACGTACACCCACCACGTGGGTACAA
TGAATTGGCTCGAGGACGGCAGTATGGTGTACGGCGCGGGGGATGGATCG
CATTTTCAGGGCCTTGACCACGGTATGCCGCAAGACGAATGCACAGATCC
CAAGGGTCCCAAAGACCAGGGCGTTTTCAGCTCCCAAAAGGACGCGTATC
TCCGGGGAAAATTCCTTCGGATTAAACCCGCCTCCGTCCTCAAGAAGGAC
TACCTGAAGGAATGGGTAGACTTCGTCCAGATCAGCAAAGGGGCGCGAAA
CCCGTTCCGATCCGTTGTGGACCCGAAGAATGGGGACTTGTACTTCGGGG
ACGTCGGTTCGAGTGTGTGGGAGGAGATCAATCGGATTCCTAACCCCCTA
GCGGCTGATTATACAAAGAAGAATTTCGGCTGGCCGTGTGTGGAGGGCAA
TAACGCCGTGAGCGAGATCTATCAGACGTGGCTGCGTGCGGAAGGCTTGC
TCTCCACCTGCCAAGATGTTTACGACGGGAACTTCAACAAACCGGTCTAC
TCCTACCGGTATGGAGCGGTCGACCCCGACTTTCCCGATGAGTGCACAGA
GGCGGACGCCTCCGTCAGTGGGATCACTTTTTATACAGGCGACAAGCTCC
CGACAAGATACCAGGGCAAGATGTTCTTTGTCGATTACAGCAAAAAATGC
GGTTTCTGGTTCGATCAGGCCGGCGATGGCTCTCCTGATTTCTCGCACGC
CCACGCCTTCATGACCACCGCGGGGGCACAGGCCGGCGGCGTGACCGACG
TCAAGACCGGCTTGGACGGGTACTTGTATGTGGTGGACTATGCAGGGGGC
AAGCTGTACCGGTTTTCGGACGCGAACGACGCTAGGACAGATGCCCTGGC
GACGGGGGGACAGGCGGAGGAGGAGGGCGGCGAGACTGCCATGTGGATTG
AGTCGACCCCAAACACCTACAACTGGCAATACGGCGATGTGGTGACTTAC
AAATTAATGACCCCGCCCGGGTCCCCTCCTCTGGATCCCAAGAACGTGAC
GTGGCGCGTGACCAATGGGCATTGTGTGAAGAATCCGTGCACCGGCACCA
ACGACTGCCACGTCCACGAGGTCTCCCTCTCCACTGACAGCCTAACGGGC
CTCAGTGGGTCGTTCCGTCCCTCCCCCCACCCCATGGAGAGCTTCATCAA
CATTCTTGCCCGCGTGGGCATGCCAGACGGGAGCACCCAGAAGGTGGAAT
TTACTTCGCACGCCCTGTCGTACAACTACAAGTTGACGTCCGATCCCCCC
GGGCTGCCCATCATCATCGAGGAGTTCGTCTGCCTGGCCTCCCCCTGCAT
CACGTCGCAGATGGCTAAGACCAACCCGGGATTCGCGGCGCAGAACGTAC
AAGTGTACCAAGACGAAATCTACAAATTCAGTTACTGGACTGCCACCAGC
GTCAGCACCAACAAGGTCAAGAAAGTATCCCGTACCATCTTCGAAGAGAC
CGCCGACGGCGACTACACCGTGCAAGCCCACTACCAAAAAACCAATATGG
CGGGCGTCGACGATCCTCTCCTCGGGATCCCTGAGAATGTTATGGCCGAA
GGCGACTATGAGCGCGTTTCACTGAAGTGGGATGCACCCACCCCTGGGCC
AAATTCGCCCGATTTCATAATAATTAGCATCAAAGATGCCGCTACCGGTC
TCCTCGTCAAGGATCACATGACCACCGCTGCCAAAGGGAACGTGGTCCTC
CCCCTCCCCACCGCTGCCGCAGCCTATACCGTTGATATGTCCTACCTTTC
TTCCGCCAAAAACGTCCGAGGGGTCCGCTCGCCTCCTCTACCCTTCCAAA
CTCAAGCCGCGCTGACCAAGGGAACGGCCGCCTGTCTGGCCGGGACTCAA
TTTACCGAGAGCCTCCACAAATCGACAAGAGAGGGCTTGGGAGACTTGTA
TCAGATCGGAGTGCTGGGCACATACCCCACCACCCTGACCCAAGGGCAGA
AGGTCCGCCTGACATTCGGGGTGGTGTCGGAGACGGCCACTCAATTGATG
GTGAACATCTTGAAGAAGGATGATTTCACCTGGGCAGCGGGCAAGATTGT
CAATGTTCCCGCGAAGACAAACAAGTTGATGAACGTCGAGTTTACGGTCA
TGAGTGAGATCCGGAACAAGGAAGAGTACTTCATAGATGCCCTTCTCCTG
CAAGATGCGAAGGACTACAAAACGGCCCTTGTCGAAGACACCTCTGCCAA
CCGAATATTCGGAGTAGATATACCAGACGCTGTCGGGGTCACCGCTGCCG
GCGCCACCACAGCCGCTACTGCAGCTGCTGCTGCCTCTGGGCAACAGCAG
CCACCCCGGCCATTGGAAGGAGCAGCGGGAACAGGAGCAGGAGTAGGGAT
GCCGGGGGCGCCACTGCAGCCGGCAGCAGTGGTAGCGGCCGCGAATCCTT
AA

Synonyms

Publications