NO05G04330.1, NO05G04330.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G04330.1
Unique Name	NO05G04330.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3854
Alignment location	chr5:1111850..1116036 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1111850..1116036 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G04330.1 vs.
Match: EWM27961.1 (pre-mrna cleavage complex 2 protein [Nannochloropsis gaditana])

HSP 1 Score: 545.4 bits (1404), Expect = 2.500e-151
Identity = 381/725 (52.55%), Postives = 463/725 (63.86%), Query Frame = 0

Query:    1 MDSILQNVRGQYISLFARYAVAMCCRTYEEGSVRDRQCIAKLLRLWRQRSIFHRSVLDPIDVHVERIEKAASAGADGGGGAGTGMGHAVGGIGSSSNGGGYGSGVGEKRKVPPAPAPAPAPPPNYPRDSRLPFSTSHSSSCSPHSHLPSSTSSSETTPPPLHKDPRRQPLPPSSSSTGQINVSSTGTSIHSPQPLPPPSHPPSSHIHYQGPPQAPVPTQSTTPAPAPSTAAPAASS-STRSLEFILAVDKEMREMLDGMVREMGEAKMTIEELARRNPQAAEQLKKVAEASVASRMYTRAQAAVEAFDAVGPFALPPTGREMWGKGGEVAQRLQKVIVGAGPNPEKPGLVNAARETAFQMLSMVNILMQQQGLPPLA--IPAIL-APRPPPRPVAPPPPPPPPP--PPQQHTSQALAQQLAWALMQQQQQQQ-------QQQRPPQ------QSQQQQQQQPPSVPHSQQQQQQLRQGQQLSHQQQAAQYTLSKLYTGEQCKEDGLRFPTPHALQAHQNRLQQTSSLATAAAGKGTTSTEVFLRSRPWFGLVSEWTKEPKPAQRTVALAGKIGHF---QGGKGGGTGSGGAR-VDGA-GGGAGEDSEHCVPMDDSGGGCMLCGEPFDQFWESGSSQWMYRNAIPVVVVKGECVPVSAEAAAAAGDGV--LVHWLCFEASDRKEAAKMLKPRAQSPLPVKSKSNSSGGSQGSDLVEGSEEIELPDE 700
            MDSILQN+RGQYI LF+RYAVAMCCRTYEEGS RDRQCI+KLLRLWR+R +F  +VLDPIDVH+ RIE+     A G        GH              G GVGEKRK+PP  +PAP  PP+     RL           P S  P    + E+    L KDPRRQP   SS  + ++            +  PPP+ PP        PP+ P   Q+  PAP PS   P  SS +T+SL+FILAVD+EM+ ML+ +++EMGEAKMTIEELARRNP+AAEQLKK AE +VASR+++ AQ AV+A DAVGPFALPP  R+MW KGG+VA RLQK +  AGP P K GL+ AA+ETA Q+ +M+NILMQ QGLPPL    PA   APRPPP P  PPPPPPPPP  P Q +  Q +AQ+LA AL+ QQQ+Q        QQQ PP          QQQQQQPP+ PH    QQ  +Q QQLS QQQ  QY L KLY+GEQCKEDGLRF +P +LQ H+  L +   LA AAAGKGTT TEV LRSRPWF  +  W+KE  P++R  +LA +I H    Q G+  G    G + +DG  G    E+  HCVP+DD   GC LCGEPFDQFWE  SS+WMYRNAIPV +V+GECVPVS++ A  +G+    LVHWLC+EA DR+EAA+ML    Q P    + + S GG+   D  +G+  +E   E
Sbjct:   71 MDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIERVGREKASGTRAMAVS-GHT-------------GVGVGEKRKLPPLQSPAPPVPPSARLSPRL---------SPPPSPPPDLGRNGESDGSRLRKDPRRQPAHLSSGPSDKL------------RGPPPPAPPP--------PPRVP---QAAIPAPDPSQPRPRPSSTTTQSLQFILAVDREMKSMLEKLLQEMGEAKMTIEELARRNPRAAEQLKKAAEVTVASRLHSEAQNAVDALDAVGPFALPPVDRDMWVKGGQVAARLQKAVSDAGPAPVKAGLIRAAQETASQVKAMINILMQHQGLPPLPHHNPASAPAPRPPPPPPPPPPPPPPPPHQPSQPYALQTMAQKLAEALLNQQQRQPQYSQQHLQQQVPPNVPPSSIPLSQQQQQQPPA-PHQALLQQDQKQ-QQLSRQQQGKQYILIKLYSGEQCKEDGLRFSSPTSLQDHEAWLAKVHKLALAAAGKGTTQTEVLLRSRPWFCTIDAWSKEALPSERAESLASRISHLNLRQKGRSVGQKMDGRKGIDGGHGDNEAENLAHCVPVDDGFSGCALCGEPFDQFWEDASSEWMYRNAIPVAIVEGECVPVSSDTAVESGESTRHLVHWLCYEACDRREAARML----QKPGDTSTTTASHGGN--GDDAKGALSLEKKPE 741

The following BLAST results are available for this feature:

BLAST of NO05G04330.1 vs.

BLAST of NO05G04330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27961.1	2.500e-151	52.55	pre-mrna cleavage complex 2 protein [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G04330	NO05G04330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04330.1	NO05G04330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G04330.1.cds1	NO05G04330.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO05G04330.1.cds2	NO05G04330.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:1111850..1116036-
coding sequence from alignment at chr5:1111850..1116036-

mRNA sequence

>NO05G04330.1 ID=NO05G04330.1|Name=NO05G04330.1|organism=Nannochloropsis oceanica|type=mRNA|length=3854bp
CCCATTTTGAAAGTCAACTCCTAGAGTGGGTGGTTGGATTGCATAACAGG
AGCATGGGCCAGCTCGGCTCGAGAAAAACTTCAGTAGAAGAGTTTTTCTT
TTGGAGAGAAGAGAACCAAGAAGAAGCAGACAAACGAAATCACTTCACAC
GCACAACACAAAAGACGCTGCGTGCCTCGCGGCACCACAAAAACACAGAC
ATTCAAATGTAACTCAGCCTGAGCATACCTGTAGTGTCCTTGCCTCCCGC
CTACATCTCTCACGTCTCTCCAACCTTCCACCAACCATCATGACCATCAT
TTCATTACAGGGAGGGGGGACTAGAGGACCGACGCCCACAGCCCTTGAGG
GGCCCTCCGCCGCTCCACACGCCCCGCCGGCGTTCCCGATACCACGGATA
TATTCAGTGGCCTGTTGTAGGCTGCGTTTGCGCGCTCAAGGAGGATGGGG
GGCATGCCAGAAGCGACCACGCCCTTGCAGCGTTTCCAGGAGGATATGGG
GAAGCTGGCCGCGCACCCCGACAAGGACACAATTATGCGACTGACCAACA
TCGCAATGACCCACCAGGAGCTAGGCAATGATATGGTAGAACTCGTGCAG
AGCCGCGTCCTCAGTTATGATACAACTTGAAAGGAAGGATACGAAGGTGT
ACTGGATATTTCGGCACATCGGACGGATGCGCGTCTGTATGGAGAACAAG
CAAAGTTACCTCGTTGGCTTTCCGCCCAGCCCTTCCACCCGTCCTGCCGC
TATCATTGCTCTACCGAGGAGCATGATTTTAATCGAACTAGTACATAGTC
AGTTTGCAAAGCAACTGTTCAAACAACAAAACCGAGAGAGATGCCTATTT
TCTGTGTTTTATTTGCCTTCCTTTCTAGAATCGACATACGCCGCTTTCCT
GCCTCTCGACTACGCAGAAAAACATCGCACCGTTGCGGTCCATTAAATAA
ACGCATGCATATCGACAACTGAATGCGCCCTATAGATTTGTGCAATCATA
TTGCAAGAATTTTCTATCCCTTTCTTTACCTCTTCTCCCTCCTTTCACCT
AATCACCGTCCTGTTGCCTTTGTGGCCCTCCCCACCCCCTACTACAAACA
AATGCACAGTCCAAAACACCCCCGGCCTATCGCCTCCCCCTCTGCTATCT
CATGGACTCAATCCTGCAGAACGTCCGCGGGCAGTACATATCCCTCTTCG
CCCGCTACGCAGTGGCCATGTGCTGTCGTACTTACGAAGAGGGCTCGGTG
CGAGACAGGCAGTGCATAGCCAAGCTATTACGATTGTGGCGGCAACGAAG
TATTTTTCATCGGTCTGTTTTGGACCCGATTGATGTGCATGTGGAAAGGA
TTGAGAAGGCCGCTTCTGCAGGCGCTGATGGAGGAGGAGGAGCAGGAACA
GGGATGGGGCATGCTGTAGGAGGGATCGGGAGCAGCAGTAATGGCGGCGG
CTACGGCAGCGGCGTGGGAGAAAAGAGAAAAGTTCCTCCTGCACCAGCAC
CAGCACCAGCACCACCACCTAACTACCCTCGCGACTCGCGCCTCCCTTTC
TCCACCTCCCACTCTTCTTCCTGTTCCCCTCACTCCCACCTCCCATCTTC
TACCTCCTCCTCTGAAACGACCCCTCCTCCCCTCCACAAGGACCCCCGTC
GTCAACCACTACCACCATCCTCCTCCTCCACCGGCCAAATCAATGTATCC
TCCACTGGCACCTCCATTCATAGCCCCCAACCACTACCACCACCATCCCA
CCCGCCTTCGAGCCACATCCATTACCAAGGCCCCCCTCAAGCACCGGTAC
CAACACAATCAACAACACCAGCACCAGCGCCATCGACAGCAGCACCTGCC
GCCAGCAGCAGTACTCGCTCCTTAGAGTTTATCCTCGCGGTCGATAAAGA
AATGAGGGAAATGCTTGACGGGATGGTACGTGAGATGGGAGAAGCCAAGA
TGACCATCGAGGAACTCGCCCGCCGCAACCCTCAAGCAGCGGAGCAACTC
AAAAAAGTAGCCGAAGCTTCGGTAGCCTCTCGAATGTACACCCGGGCTCA
GGCAGCAGTGGAAGCTTTTGATGCCGTCGGTCCTTTCGCATTGCCGCCGA
CGGGAAGGGAAATGTGGGGAAAGGGAGGGGAAGTCGCCCAGCGGCTACAG
AAAGTAATTGTAGGAGCGGGCCCCAATCCAGAGAAGCCTGGTTTAGTGAA
TGCTGCGCGAGAGACGGCTTTTCAAATGTTATCGATGGTCAACATTCTGA
TGCAGCAGCAAGGCCTCCCTCCCCTCGCGATTCCCGCCATACTTGCTCCT
CGCCCCCCGCCTCGACCAGTCGCTCCTCCTCCCCCTCCTCCTCCTCCCCC
TCCTCCTCAACAACATACGTCGCAGGCCTTGGCGCAGCAGCTGGCCTGGG
CGCTGATGCAGCAGCAGCAACAGCAGCAGCAGCAACAGCGACCACCGCAA
CAATCCCAACAGCAACAACAGCAGCAGCCACCCTCTGTCCCTCATTCCCA
GCAGCAGCAACAACAGCTGCGGCAAGGCCAGCAGCTATCCCATCAGCAAC
AAGCCGCTCAATACACCCTTTCGAAACTCTACACCGGAGAACAATGCAAA
GAAGACGGCCTCCGCTTCCCCACCCCTCACGCCCTCCAAGCGCACCAAAA
CCGATTGCAGCAAACCAGTTCTCTCGCCACCGCTGCAGCAGGAAAAGGTA
CAACAAGCACGGAAGTCTTTCTGCGGTCTCGCCCGTGGTTTGGTCTTGTA
TCTGAATGGACAAAAGAGCCAAAACCGGCGCAAAGGACCGTGGCGTTGGC
CGGGAAAATTGGGCACTTCCAAGGAGGAAAGGGTGGTGGGACAGGGAGCG
GGGGAGCGAGGGTGGATGGTGCTGGAGGAGGAGCAGGGGAAGACTCGGAG
CATTGCGTGCCGATGGATGATAGTGGGGGTGGGTGTATGTTATGTGGGGA
GCCATTTGACCAGTTTTGGGAGAGTGGGTCGTCGCAGTGGATGTACCGGA
ATGCGATTCCTGTGGTGGTTGTGAAGGGGGAATGTGTACCTGTATCAGCG
GAAGCAGCGGCAGCGGCGGGGGACGGGGTATTAGTGCACTGGTTGTGTTT
TGAGGCTTCAGATAGAAAAGAGGCGGCTAAGATGTTAAAGCCAAGGGCAC
AATCGCCCTTGCCAGTCAAGAGCAAAAGCAACAGTAGCGGCGGGAGCCAA
GGGAGCGACCTGGTTGAGGGCAGCGAGGAGATTGAGCTGCCGGATGAGGT
GGAGGCGTAGGAAAAGTGGGAGGGAGGCAGGGATTTAGCGAGGGGCGACT
GAAGAAGTGCAAATTAGCAAGCACGTGTACGATATTTTTAACAAATAAAA
GCATTCTGTGTCAGAGTCAGTGGGCCTCGTCTCGTCTCGTCTGTTGCATT
CTTTATCCTGTCTTGCCTGCCAATCAATGCTCGCTCCTTAACTCAGACAT
TACTGGCTCGCTCGTCAAGTCCTACAGTGATATCCTAGTCATAAAAGGGT
GAGAGGGAGAAGGGAAAGCACTTTCCCCCCTTTTCCTCCATTGATTTCGC
TGGTGGTTCGTCGACCAAAAGCAAATGCATGGGAGTGCAAGATTTACAAG
AGACATACAACGCTTGGAGAAAAGAAAGGAAGTACCCGAGTGAGGGGGAT
CCAAATGATTGAAAATAGCATTCAGAAACCAACCACAAAGGTAGAGAAGG
AAGTGGGCGTCGGACAGATACACAAACACAAAAAGGAGGAGGGAGAAAAA
GAAGAGGCGATGCTTGTGGCGCAGGTAGCCAGAAAAAGACCATTCACTTT
CCACATCAAAATAAAAGCAAGCAAAGAATAAAGCAAAAATATTTACAACC
TCCT

protein sequence of NO05G04330.1

>NO05G04330.1-protein ID=NO05G04330.1-protein|Name=NO05G04330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=703bp
MDSILQNVRGQYISLFARYAVAMCCRTYEEGSVRDRQCIAKLLRLWRQRS
IFHRSVLDPIDVHVERIEKAASAGADGGGGAGTGMGHAVGGIGSSSNGGG
YGSGVGEKRKVPPAPAPAPAPPPNYPRDSRLPFSTSHSSSCSPHSHLPSS
TSSSETTPPPLHKDPRRQPLPPSSSSTGQINVSSTGTSIHSPQPLPPPSH
PPSSHIHYQGPPQAPVPTQSTTPAPAPSTAAPAASSSTRSLEFILAVDKE
MREMLDGMVREMGEAKMTIEELARRNPQAAEQLKKVAEASVASRMYTRAQ
AAVEAFDAVGPFALPPTGREMWGKGGEVAQRLQKVIVGAGPNPEKPGLVN
AARETAFQMLSMVNILMQQQGLPPLAIPAILAPRPPPRPVAPPPPPPPPP
PPQQHTSQALAQQLAWALMQQQQQQQQQQRPPQQSQQQQQQQPPSVPHSQ
QQQQQLRQGQQLSHQQQAAQYTLSKLYTGEQCKEDGLRFPTPHALQAHQN
RLQQTSSLATAAAGKGTTSTEVFLRSRPWFGLVSEWTKEPKPAQRTVALA
GKIGHFQGGKGGGTGSGGARVDGAGGGAGEDSEHCVPMDDSGGGCMLCGE
PFDQFWESGSSQWMYRNAIPVVVVKGECVPVSAEAAAAAGDGVLVHWLCF
EASDRKEAAKMLKPRAQSPLPVKSKSNSSGGSQGSDLVEGSEEIELPDEV
EA*

mRNA from alignment at chr5:1111850..1116036-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G04330.1 ID=NO05G04330.1|Name=NO05G04330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4187bp|location=Sequence derived from alignment at chr5:1111850..1116036- (Nannochloropsis oceanica)
CCCATTTTGAAAGTCAACTCCTAGAGTGGGTGGTTGGATTGCATAACAGG
AGCATGGGCCAGCTCGGCTCGAGAAAAACTTCAGTAGAAGAGTTTTTCTT
TTGGAGAGAAGAGAACCAAGAAGAAGCAGACAAACGAAATCACTTCACAC
GCACAACACAAAAGACGCTGCGTGCCTCGCGGCACCACAAAAACACAGAC
ATTCAAATGTAACTCAGCCTGAGCATACCTGTAGTGTCCTTGCCTCCCGC
CTACATCTCTCACGTCTCTCCAACCTTCCACCAACCATCATGACCATCAT
TTCATTACAGGGAGGGGGGACTAGAGGACCGACGCCCACAGCCCTTGAGG
GGCCCTCCGCCGCTCCACACGCCCCGCCGGCGTTCCCGATACCACGGATA
TATTCAGTGGCCTGTTGTAGGCTGCGTTTGCGCGCTCAAGGAGGATGGGG
GGCATGCCAGAAGCGACCACGCCCTTGCAGCGTTTCCAGGAGGATATGGG
GAAGCTGGCCGCGCACCCCGACAAGGACACAATTATGCGACTGACCAACA
TCGCAATGACCCACCAGGAGCTAGGCAATGATATGGTAGAACTCGTGCAG
AGCCGCGTCCTCAGTGTAAGTGGGTGGAGGGTCGGGTTGTGAGGGTGTGG
GAGGCGATGGGGTGGTTGCTCGAAAGAGGGGACATGGAACCTCCGTCTTC
CCTCTCTCCTTCCCCACCCTTTGTACATAGTATGATACAACTTGAAAGGA
AGGATACGAAGGTGTACTGGATATTTCGGCACATCGGACGGATGCGCGTC
TGTATGGAGAACAAGCAAAGTTACCTCGTTGGCTTTCCGCCCAGCCCTTC
CACCCGTCCTGCCGCTATCATTGCTCTACCGAGGAGCATGATTTTAATCG
AACTAGTACATAGTCAGTTTGCAAAGCAACTGTTCAAACAACAAAACCGA
GAGAGATGCCTATTTTCTGTGTTTTATTTGCCTTCCTTTCTAGAATCGAC
ATACGCCGCTTTCCTGCCTCTCGACTACGCAGAAAAACATCGCACCGTTG
CGGTCCATTAAATAAACGCATGCATATCGACAACTGAATGCGCCCTATAG
ATTTGTGCAATCATATTGCAAGAATTTTCTATCCCTTTCTTTACCTCTTC
TCCCTCCTTTCACCTAATCACCGTCCTGTTGCCTTTGTGGCCCTCCCCAC
CCCCTACTACAAACAAATGCACAGTCCAAAACACCCCCGGCCTATCGCCT
CCCCCTCTGCTATCTCATGGACTCAATCCTGCAGAACGTCCGCGGGCAGT
ACATATCCCTCTTCGCCCGCTACGCAGTGGCCATGTGCTGTCGTACTTAC
GAAGAGGGCTCGGTGCGAGACAGGCAGTGCATAGCCAAGCTATTACGATT
GTGGCGGCAACGAAGTATTTTTCATCGGTCTGTTTTGGACCCGATTGATG
TGCATGTGGAAAGGATTGAGAAGGCCGCTTCTGCAGGCGCTGATGGAGGA
GGAGGAGCAGGAACAGGGATGGGGCATGCTGTAGGAGGGATCGGGAGCAG
CAGTAATGGCGGCGGCTACGGCAGCGGCGTGGGAGAAAAGAGGTGTGTGT
GTCCTTCAATACAGGAATTTGGCTTGTTGCTTGGTTTATCAACTTTTCGT
TTTCTGTTTGTTGTGTCAGTGACACATGTATGGGCTGACGCGCCCTCTCC
CTTTCTCGGGGTTCGTTTCACGTATCATTTTAGCACCATTAACTCATTCC
CTCCTCCTTTCCATCCCCACTTTTCCCATTCTTTTCTCTTCACTTCCATT
CTGCAACCAGAAAAGTTCCTCCTGCACCAGCACCAGCACCAGCACCACCA
CCTAACTACCCTCGCGACTCGCGCCTCCCTTTCTCCACCTCCCACTCTTC
TTCCTGTTCCCCTCACTCCCACCTCCCATCTTCTACCTCCTCCTCTGAAA
CGACCCCTCCTCCCCTCCACAAGGACCCCCGTCGTCAACCACTACCACCA
TCCTCCTCCTCCACCGGCCAAATCAATGTATCCTCCACTGGCACCTCCAT
TCATAGCCCCCAACCACTACCACCACCATCCCACCCGCCTTCGAGCCACA
TCCATTACCAAGGCCCCCCTCAAGCACCGGTACCAACACAATCAACAACA
CCAGCACCAGCGCCATCGACAGCAGCACCTGCCGCCAGCAGCAGTACTCG
CTCCTTAGAGTTTATCCTCGCGGTCGATAAAGAAATGAGGGAAATGCTTG
ACGGGATGGTACGTGAGATGGGAGAAGCCAAGATGACCATCGAGGAACTC
GCCCGCCGCAACCCTCAAGCAGCGGAGCAACTCAAAAAAGTAGCCGAAGC
TTCGGTAGCCTCTCGAATGTACACCCGGGCTCAGGCAGCAGTGGAAGCTT
TTGATGCCGTCGGTCCTTTCGCATTGCCGCCGACGGGAAGGGAAATGTGG
GGAAAGGGAGGGGAAGTCGCCCAGCGGCTACAGAAAGTAATTGTAGGAGC
GGGCCCCAATCCAGAGAAGCCTGGTTTAGTGAATGCTGCGCGAGAGACGG
CTTTTCAAATGTTATCGATGGTCAACATTCTGATGCAGCAGCAAGGCCTC
CCTCCCCTCGCGATTCCCGCCATACTTGCTCCTCGCCCCCCGCCTCGACC
AGTCGCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCAACAACATA
CGTCGCAGGCCTTGGCGCAGCAGCTGGCCTGGGCGCTGATGCAGCAGCAG
CAACAGCAGCAGCAGCAACAGCGACCACCGCAACAATCCCAACAGCAACA
ACAGCAGCAGCCACCCTCTGTCCCTCATTCCCAGCAGCAGCAACAACAGC
TGCGGCAAGGCCAGCAGCTATCCCATCAGCAACAAGCCGCTCAATACACC
CTTTCGAAACTCTACACCGGAGAACAATGCAAAGAAGACGGCCTCCGCTT
CCCCACCCCTCACGCCCTCCAAGCGCACCAAAACCGATTGCAGCAAACCA
GTTCTCTCGCCACCGCTGCAGCAGGAAAAGGTACAACAAGCACGGAAGTC
TTTCTGCGGTCTCGCCCGTGGTTTGGTCTTGTATCTGAATGGACAAAAGA
GCCAAAACCGGCGCAAAGGACCGTGGCGTTGGCCGGGAAAATTGGGCACT
TCCAAGGAGGAAAGGGTGGTGGGACAGGGAGCGGGGGAGCGAGGGTGGAT
GGTGCTGGAGGAGGAGCAGGGGAAGACTCGGAGCATTGCGTGCCGATGGA
TGATAGTGGGGGTGGGTGTATGTTATGTGGGGAGCCATTTGACCAGTTTT
GGGAGAGTGGGTCGTCGCAGTGGATGTACCGGAATGCGATTCCTGTGGTG
GTTGTGAAGGGGGAATGTGTACCTGTATCAGCGGAAGCAGCGGCAGCGGC
GGGGGACGGGGTATTAGTGCACTGGTTGTGTTTTGAGGCTTCAGATAGAA
AAGAGGCGGCTAAGATGTTAAAGCCAAGGGCACAATCGCCCTTGCCAGTC
AAGAGCAAAAGCAACAGTAGCGGCGGGAGCCAAGGGAGCGACCTGGTTGA
GGGCAGCGAGGAGATTGAGCTGCCGGATGAGGTGGAGGCGTAGGAAAAGT
GGGAGGGAGGCAGGGATTTAGCGAGGGGCGACTGAAGAAGTGCAAATTAG
CAAGCACGTGTACGATATTTTTAACAAATAAAAGCATTCTGTGTCAGAGT
CAGTGGGCCTCGTCTCGTCTCGTCTGTTGCATTCTTTATCCTGTCTTGCC
TGCCAATCAATGCTCGCTCCTTAACTCAGACATTACTGGCTCGCTCGTCA
AGTCCTACAGTGATATCCTAGTCATAAAAGGGTGAGAGGGAGAAGGGAAA
GCACTTTCCCCCCTTTTCCTCCATTGATTTCGCTGGTGGTTCGTCGACCA
AAAGCAAATGCATGGGAGTGCAAGATTTACAAGAGACATACAACGCTTGG
AGAAAAGAAAGGAAGTACCCGAGTGAGGGGGATCCAAATGATTGAAAATA
GCATTCAGAAACCAACCACAAAGGTAGAGAAGGAAGTGGGCGTCGGACAG
ATACACAAACACAAAAAGGAGGAGGGAGAAAAAGAAGAGGCGATGCTTGT
GGCGCAGGTAGCCAGAAAAAGACCATTCACTTTCCACATCAAAATAAAAG
CAAGCAAAGAATAAAGCAAAAATATTTACAACCTCCT

Coding sequence (CDS) from alignment at chr5:1111850..1116036-

>NO05G04330.1 ID=NO05G04330.1|Name=NO05G04330.1|organism=Nannochloropsis oceanica|type=CDS|length=2109bp|location=Sequence derived from alignment at chr5:1111850..1116036- (Nannochloropsis oceanica)
ATGGACTCAATCCTGCAGAACGTCCGCGGGCAGTACATATCCCTCTTCGC
CCGCTACGCAGTGGCCATGTGCTGTCGTACTTACGAAGAGGGCTCGGTGC
GAGACAGGCAGTGCATAGCCAAGCTATTACGATTGTGGCGGCAACGAAGT
ATTTTTCATCGGTCTGTTTTGGACCCGATTGATGTGCATGTGGAAAGGAT
TGAGAAGGCCGCTTCTGCAGGCGCTGATGGAGGAGGAGGAGCAGGAACAG
GGATGGGGCATGCTGTAGGAGGGATCGGGAGCAGCAGTAATGGCGGCGGC
TACGGCAGCGGCGTGGGAGAAAAGAGAAAAGTTCCTCCTGCACCAGCACC
AGCACCAGCACCACCACCTAACTACCCTCGCGACTCGCGCCTCCCTTTCT
CCACCTCCCACTCTTCTTCCTGTTCCCCTCACTCCCACCTCCCATCTTCT
ACCTCCTCCTCTGAAACGACCCCTCCTCCCCTCCACAAGGACCCCCGTCG
TCAACCACTACCACCATCCTCCTCCTCCACCGGCCAAATCAATGTATCCT
CCACTGGCACCTCCATTCATAGCCCCCAACCACTACCACCACCATCCCAC
CCGCCTTCGAGCCACATCCATTACCAAGGCCCCCCTCAAGCACCGGTACC
AACACAATCAACAACACCAGCACCAGCGCCATCGACAGCAGCACCTGCCG
CCAGCAGCAGTACTCGCTCCTTAGAGTTTATCCTCGCGGTCGATAAAGAA
ATGAGGGAAATGCTTGACGGGATGGTACGTGAGATGGGAGAAGCCAAGAT
GACCATCGAGGAACTCGCCCGCCGCAACCCTCAAGCAGCGGAGCAACTCA
AAAAAGTAGCCGAAGCTTCGGTAGCCTCTCGAATGTACACCCGGGCTCAG
GCAGCAGTGGAAGCTTTTGATGCCGTCGGTCCTTTCGCATTGCCGCCGAC
GGGAAGGGAAATGTGGGGAAAGGGAGGGGAAGTCGCCCAGCGGCTACAGA
AAGTAATTGTAGGAGCGGGCCCCAATCCAGAGAAGCCTGGTTTAGTGAAT
GCTGCGCGAGAGACGGCTTTTCAAATGTTATCGATGGTCAACATTCTGAT
GCAGCAGCAAGGCCTCCCTCCCCTCGCGATTCCCGCCATACTTGCTCCTC
GCCCCCCGCCTCGACCAGTCGCTCCTCCTCCCCCTCCTCCTCCTCCCCCT
CCTCCTCAACAACATACGTCGCAGGCCTTGGCGCAGCAGCTGGCCTGGGC
GCTGATGCAGCAGCAGCAACAGCAGCAGCAGCAACAGCGACCACCGCAAC
AATCCCAACAGCAACAACAGCAGCAGCCACCCTCTGTCCCTCATTCCCAG
CAGCAGCAACAACAGCTGCGGCAAGGCCAGCAGCTATCCCATCAGCAACA
AGCCGCTCAATACACCCTTTCGAAACTCTACACCGGAGAACAATGCAAAG
AAGACGGCCTCCGCTTCCCCACCCCTCACGCCCTCCAAGCGCACCAAAAC
CGATTGCAGCAAACCAGTTCTCTCGCCACCGCTGCAGCAGGAAAAGGTAC
AACAAGCACGGAAGTCTTTCTGCGGTCTCGCCCGTGGTTTGGTCTTGTAT
CTGAATGGACAAAAGAGCCAAAACCGGCGCAAAGGACCGTGGCGTTGGCC
GGGAAAATTGGGCACTTCCAAGGAGGAAAGGGTGGTGGGACAGGGAGCGG
GGGAGCGAGGGTGGATGGTGCTGGAGGAGGAGCAGGGGAAGACTCGGAGC
ATTGCGTGCCGATGGATGATAGTGGGGGTGGGTGTATGTTATGTGGGGAG
CCATTTGACCAGTTTTGGGAGAGTGGGTCGTCGCAGTGGATGTACCGGAA
TGCGATTCCTGTGGTGGTTGTGAAGGGGGAATGTGTACCTGTATCAGCGG
AAGCAGCGGCAGCGGCGGGGGACGGGGTATTAGTGCACTGGTTGTGTTTT
GAGGCTTCAGATAGAAAAGAGGCGGCTAAGATGTTAAAGCCAAGGGCACA
ATCGCCCTTGCCAGTCAAGAGCAAAAGCAACAGTAGCGGCGGGAGCCAAG
GGAGCGACCTGGTTGAGGGCAGCGAGGAGATTGAGCTGCCGGATGAGGTG
GAGGCGTAG

Synonyms

Publications