NO05G03910.1, NO05G03910.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G03910.1
Unique Name	NO05G03910.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4617
Alignment location	chr5:1007637..1012253 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1007637..1012253 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G03910.1 vs.
Match: EWM28011.1 (carbamoyl-phosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 2845.8 bits (7376), Expect = 0.000e+0
Identity = 1409/1538 (91.61%), Postives = 1474/1538 (95.84%), Query Frame = 0

Query:    1 MYRALRSPLGSRAMQVFQAHQSGAANRLAPGAGNAVAFSSNQGVKGIILRRLMATQSDASAKPPTKRAWLVLEDGTRLEGYSFGADKAMNGEVVFSTGMVGYTESLTDPSYRRQILTLTTPMVGNYGVPDPNVLDELGLPKAFESYKIHAAGLVVQDYSHHFSHWNAHFSLGDWLKQEGIPAIAGIDTRMLTKKIRSRGAMLGRIEFEDGAKPELDDVNKKHLVQEVSVPEPRIYGKGNDVKILAVDCGIKNNIIRHLVRKGAEVKVVPWDHDIVKEMKHHQGLFLSNGPGDPTMCGTTVEHLRKLVNDPSFMKPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVVNMLTGKAFITPQNHGYAIDDTTLPAPWKPLFRNLNDQSNEGILHTQKPIFSAQFHPEAAGGPTDTEFFFDVFLDTVREQRKSIVFPPVKPTPVRPEVKKVLLLGSGGLSIGQAGEFDYSGAQAIKALKEEGLEVVLMNPNIASVQTNVDDKSSAKADQVYFLPVNTDYVEQVIKRERPDGLVLSMGGQTALNCGLELHHKGVLSKYNVKVLGTQIDAIEASEDRQLFSDKLNEINEKIAPSITASTIAQALTAAEKIGYPCMIRSAYALGGLGSGICRDAAHLEEMAAKALSLSSQILVEKSLKGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVVAPSQTLSNEEYHMLRETALKVVRHLGIVGECNIQYALDPYSLEYCIIEVNARLSRSSALASKATGYPLAFVAAKLSLGITLPEIQNSVTKSTQACFEPSLDYIVTKIPRWDLSKFQGVATEIGSSMKSVGEVMAIGRTWEECIQKAMRMVDPAIEGFQMRKRYDDAMALEYELTNPSDKRLYAIAQVFAEKTKTVEDIHELTAIDHWFLRRLERISQHRDVLVKHGSGTGALDSLPREDLHLAKKLGFSDRQLGALLGTTDDAVRSKREAAGIVPAVKQIDTLAAEYPAKTNYLYCTYNGQEDDVVKGEGGVIVLGSGTYRIGSSVEFDWCGVSAIRALRGMGYRTTMVNYNPETVSTDYDECDQLYFDELSKERIRDIYSREGASGVVVSVGGQIPNNLAMPLHRAGVKIMGTTPEMIDQAEDRAKFSALMESLGIQQPAWKELADTASALAFAEEVGYPVLVRPSYVLSGAAMSVAFSDEALLTVLAHAADVSQEHPVVITKFVDGANEIEMDAVAMDGMVVAAAMHEHVENAGVHSGDATLMLPPQRISTYTAMRVNEATKKIAKALNITGPFNMQFLSKGKDVSVIECNLRASRSVPFVSKTMGVDFIEAAARCMVGEDVTGMNLPQLGQTGRPSGYVGVKAPMFSFTRLRGADPVLGVEMASTGEVACFGANIHEAFLKALISTGFKVPEKNILFSVQDSLRDDIIHSAFQLHSLGYNLFATKETYEFLQACHVPCHLLHYPNQPEKHPNVLEHLKNGKIDLVINLPTPESKQVENNYLMRRTAVDFGVPLLTNIHLTKLLAEAITKYKKGELIGVQSKNLFDYYDAEAPEEAWTSPSEFH 1539
            MYRALRSPLGSRA +V Q H  GA+ RL P AG + +F  NQG+K ++LRRL+ATQSD +A PPTKRAWLVLEDGTRL+GYSFGADK MNGEVVFSTGMVGYTESLTDPSYRRQILTLT+PMVGNYGVPDP VLDELGLPKAFESYKIHAAGLVVQDYSHH+SHWNAHFSLGDWLKQEGIPAI GIDTRMLTKKIRS GAMLGRIEFEDG KPEL+DVNKKHLV EVS PE ++YGKGN +KILAVDCGIK NIIRHLVRKGAEVKVVPW HD+V EM HHQGLFLSNGPGDP+MC TTV+HL++LVNDP+F KP+FGICLGNQLLGLAAGAKATKLPFGNRGQNQPVVNMLTGKAFITPQNHGYAIDDTTLP PWKPLFRNLND SNEGILHTQKPIFSAQFHPEAAGGPTDTEFFFDVFLDTVREQRK+IVFPPVKPTP RPEV KVLLLGSGGLSIGQAGEFDYSGAQAIKALKEEGLEVVLMNPNIASVQTNVD KS AKADQVYFLPVN DYVEQVIKRERPDGLVLSMGGQTALNCGL LHHKG+L+KYNVKVLGTQIDAIEASEDRQLFSDKLNEINEKIAPSITASTIAQALTAAEKIGYPCMIRSA+ALGGLGSGICR+  HLEEMAAKALSLSSQILVEKSLKGWKEVEYEVVRD+ADNCITVCNMENFDPLGVHTGDSIVVAPSQTLSNEEYHMLRETALKVVRHLGIVGECNIQYALDPYSL+YCIIEVNARLSRSSALASKATGYPLAFVAAKLSLGITLPEIQNSVTKSTQACFEPSLDYIVTKIPRWDL+KFQGVATEIGSSMKSVGEVMAIGRTWEECIQKAMRMVDPAIEGFQ+RKRYDD  AL YELTNPSDKRLYAIAQVFAEKTKTVE+IHELTAIDHWFLRRLERIS+ RDVL+KHG+G GALDSL  E+L ++KKLG+SDRQLGALLGTTDDAVR+KREAAGIVP+VKQIDTLAAEYPAKTNYLYCTYNG EDDVV GEGGVIVLGSGTYRIGSSVEFDWCGVSAIRALRGMGYRTTMVNYNPETVSTDYDECDQLYFDELSKERI DIY REGA GVVVSVGGQIPNNLAMPLH+ GVKIMGTTPEMIDQAEDR KFSALM+SLGIQQPAWKELADT SALAFA++VGYPVLVRPSYVLSGAAMSVAF+DEALL VL+ AADVSQEHPVVITKFV+GANEIEMDAVA DG+V+AAAMHEHVENAGVHSGDATLMLPPQRIS YTAMRVNEAT+KIAKALNITGPFNMQFLSKGKDVSVIECNLRASRSVPFVSKTMGVDFIEAAARCMVGEDVTGMNLPQLGQTGRP GYVGVKAPMFSFTRLRGADPVLGVEMASTGEVACFGANIHEAFLKALISTGFKVPEKNILFSVQDSLRDD+IH+AFQLH+LGYNL+AT+ T++FL +CHVPCHLLHYPNQPEKHPNVLEHLKNGKIDLVINLPTPESKQVENNYLMRRTAVDFGVPLLTNIHLTKL AEA+TKYKKGELIG++S+NLFDYY+AEAPEEAWTSPSEFH
Sbjct:    1 MYRALRSPLGSRAAEVLQLHHVGASKRLVP-AGFSSSFK-NQGIKSVLLRRLLATQSDGAASPPTKRAWLVLEDGTRLQGYSFGADKPMNGEVVFSTGMVGYTESLTDPSYRRQILTLTSPMVGNYGVPDPKVLDELGLPKAFESYKIHAAGLVVQDYSHHYSHWNAHFSLGDWLKQEGIPAICGIDTRMLTKKIRSHGAMLGRIEFEDGPKPELEDVNKKHLVAEVSAPEAKVYGKGNPIKILAVDCGIKYNIIRHLVRKGAEVKVVPWAHDLVSEMAHHQGLFLSNGPGDPSMCTTTVQHLKELVNDPNFTKPVFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVVNMLTGKAFITPQNHGYAIDDTTLPTPWKPLFRNLNDHSNEGILHTQKPIFSAQFHPEAAGGPTDTEFFFDVFLDTVREQRKTIVFPPVKPTPARPEVAKVLLLGSGGLSIGQAGEFDYSGAQAIKALKEEGLEVVLMNPNIASVQTNVDAKSDAKADQVYFLPVNPDYVEQVIKRERPDGLVLSMGGQTALNCGLALHHKGILAKYNVKVLGTQIDAIEASEDRQLFSDKLNEINEKIAPSITASTIAQALTAAEKIGYPCMIRSAFALGGLGSGICRNPEHLEEMAAKALSLSSQILVEKSLKGWKEVEYEVVRDSADNCITVCNMENFDPLGVHTGDSIVVAPSQTLSNEEYHMLRETALKVVRHLGIVGECNIQYALDPYSLDYCIIEVNARLSRSSALASKATGYPLAFVAAKLSLGITLPEIQNSVTKSTQACFEPSLDYIVTKIPRWDLNKFQGVATEIGSSMKSVGEVMAIGRTWEECIQKAMRMVDPAIEGFQVRKRYDDDSALLYELTNPSDKRLYAIAQVFAEKTKTVEEIHELTAIDHWFLRRLERISKQRDVLLKHGNGKGALDSLSAEELAMSKKLGYSDRQLGALLGTTDDAVRAKREAAGIVPSVKQIDTLAAEYPAKTNYLYCTYNGSEDDVVTGEGGVIVLGSGTYRIGSSVEFDWCGVSAIRALRGMGYRTTMVNYNPETVSTDYDECDQLYFDELSKERIVDIYQREGAQGVVVSVGGQIPNNLAMPLHKVGVKIMGTTPEMIDQAEDRFKFSALMDSLGIQQPAWKELADTKSALAFAKQVGYPVLVRPSYVLSGAAMSVAFNDEALLRVLSVAADVSQEHPVVITKFVNGANEIEMDAVAQDGVVMAAAMHEHVENAGVHSGDATLMLPPQRISAYTAMRVNEATRKIAKALNITGPFNMQFLSKGKDVSVIECNLRASRSVPFVSKTMGVDFIEAAARCMVGEDVTGMNLPQLGQTGRPKGYVGVKAPMFSFTRLRGADPVLGVEMASTGEVACFGANIHEAFLKALISTGFKVPEKNILFSVQDSLRDDVIHAAFQLHTLGYNLYATRATHDFLLSCHVPCHLLHYPNQPEKHPNVLEHLKNGKIDLVINLPTPESKQVENNYLMRRTAVDFGVPLLTNIHLTKLFAEAMTKYKKGELIGIESQNLFDYYNAEAPEEAWTSPSEFH 1536

The following BLAST results are available for this feature:

BLAST of NO05G03910.1 vs.

BLAST of NO05G03910.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28011.1	0.000e+0	91.61	carbamoyl-phosphate synthase [Nannochloropsis gadi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G03910	NO05G03910	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G03910.1	NO05G03910.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G03910.1.cds1	NO05G03910.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:1007637..1012253-
coding sequence from alignment at chr5:1007637..1012253-

mRNA sequence

>NO05G03910.1 ID=NO05G03910.1|Name=NO05G03910.1|organism=Nannochloropsis oceanica|type=mRNA|length=4617bp
ATGTATCGCGCTCTGCGTTCTCCGTTGGGGTCGCGAGCCATGCAGGTTTT
TCAAGCGCACCAGTCGGGGGCGGCCAACCGGTTGGCTCCTGGGGCAGGGA
ATGCTGTTGCCTTCTCTTCGAACCAAGGCGTCAAGGGCATCATCCTCCGC
CGCCTCATGGCCACGCAGTCAGACGCCAGCGCAAAGCCGCCCACAAAGCG
GGCATGGTTGGTTTTGGAGGACGGGACACGCCTGGAGGGTTACTCCTTTG
GGGCAGACAAGGCCATGAATGGGGAGGTTGTTTTCTCGACGGGCATGGTG
GGCTACACCGAGTCCTTGACCGACCCTTCCTATCGCCGTCAAATTTTGAC
ACTGACCACGCCCATGGTGGGCAATTACGGAGTTCCGGATCCGAATGTGT
TGGATGAGCTTGGCTTGCCCAAGGCGTTTGAGAGCTACAAGATTCATGCG
GCAGGATTGGTTGTGCAGGACTACTCCCACCACTTCTCGCATTGGAACGC
ACACTTTTCGTTGGGGGACTGGTTAAAGCAGGAGGGCATTCCTGCTATTG
CAGGGATTGATACGAGGATGTTGACGAAGAAGATTCGGTCCCGTGGGGCC
ATGCTTGGGCGGATTGAATTCGAGGATGGGGCGAAGCCTGAGTTGGACGA
CGTGAATAAGAAGCATTTGGTTCAAGAAGTGTCGGTGCCGGAGCCAAGGA
TTTATGGGAAGGGGAATGATGTGAAAATCTTAGCGGTGGATTGCGGGATA
AAGAATAATATCATTCGACACTTGGTGAGGAAAGGGGCGGAGGTCAAAGT
CGTCCCTTGGGACCACGATATTGTCAAGGAAATGAAGCACCACCAGGGCT
TATTCTTGTCCAATGGACCTGGGGATCCGACGATGTGCGGGACAACGGTT
GAGCACTTGAGGAAGCTGGTGAATGACCCGTCTTTCATGAAGCCAATTTT
TGGGATTTGCCTGGGCAATCAGCTATTAGGGTTGGCTGCTGGTGCCAAGG
CGACGAAGCTCCCATTTGGGAACCGTGGACAGAACCAACCGGTGGTGAAC
ATGTTGACCGGGAAGGCGTTCATCACCCCTCAGAACCACGGGTATGCGAT
TGATGACACTACCTTGCCTGCACCTTGGAAGCCCCTGTTTCGTAATTTGA
ACGACCAATCGAATGAGGGGATCTTGCACACCCAGAAGCCGATATTTTCT
GCGCAGTTTCATCCGGAGGCCGCAGGCGGGCCGACGGACACGGAGTTTTT
CTTTGACGTTTTCTTGGACACGGTCCGAGAGCAGAGAAAGTCAATCGTAT
TCCCGCCTGTCAAACCGACGCCGGTGAGGCCCGAAGTGAAGAAGGTGCTG
TTGCTGGGGTCTGGAGGGTTAAGTATTGGGCAGGCAGGTGAGTTTGATTA
TTCCGGGGCACAGGCCATCAAGGCGTTGAAGGAAGAAGGGCTTGAGGTGG
TGTTGATGAACCCGAACATTGCTTCGGTCCAGACGAATGTGGACGACAAG
TCGAGTGCGAAAGCCGATCAAGTGTATTTCTTGCCGGTCAACACGGACTA
CGTTGAGCAGGTGATCAAGAGGGAGAGGCCTGATGGATTGGTGCTGTCCA
TGGGGGGACAGACTGCATTAAATTGTGGGCTGGAATTGCACCATAAGGGC
GTTTTGTCCAAGTATAATGTGAAGGTGCTGGGGACGCAAATAGACGCGAT
TGAGGCTTCGGAGGATCGGCAGTTGTTTTCGGATAAGCTGAATGAGATCA
ATGAAAAGATTGCCCCATCCATCACGGCGTCAACGATCGCGCAGGCTCTG
ACTGCAGCGGAGAAAATTGGGTATCCGTGTATGATCCGTTCTGCGTATGC
GTTGGGCGGGTTGGGGTCAGGGATTTGTAGGGATGCGGCTCATTTGGAAG
AGATGGCAGCGAAAGCCTTAAGTTTGTCTAGTCAGATTTTGGTGGAGAAG
AGTTTGAAGGGCTGGAAAGAGGTAGAGTACGAGGTGGTCAGGGACGCGGC
GGATAACTGTATTACGGTGTGTAATATGGAGAATTTCGATCCGTTGGGCG
TGCATACCGGGGACTCGATTGTAGTGGCGCCGTCACAGACGTTGTCGAAC
GAGGAGTATCACATGTTGAGGGAGACGGCGTTGAAGGTGGTGCGACATTT
GGGAATCGTCGGGGAGTGTAACATTCAGTATGCGCTTGATCCGTATTCGC
TTGAGTATTGTATTATCGAGGTGAATGCGCGGTTATCTCGTTCGTCGGCG
TTGGCCAGTAAGGCGACTGGATACCCTTTGGCGTTTGTGGCCGCAAAATT
GTCGTTGGGGATTACCCTGCCGGAGATTCAGAACAGTGTGACCAAGAGCA
CGCAGGCTTGTTTTGAACCGAGTCTGGATTATATTGTCACGAAGATCCCG
AGGTGGGATTTGAGTAAGTTCCAGGGAGTGGCGACTGAGATCGGGTCATC
GATGAAGTCGGTAGGGGAGGTGATGGCCATCGGCCGGACGTGGGAGGAGT
GCATCCAGAAGGCGATGCGCATGGTGGACCCGGCGATAGAAGGATTTCAG
ATGAGGAAGAGGTATGATGACGCGATGGCGTTGGAGTATGAGCTGACAAA
TCCGAGTGACAAGAGGTTGTATGCGATCGCGCAGGTATTTGCGGAGAAGA
CCAAGACGGTGGAAGACATTCATGAGTTGACGGCTATTGATCACTGGTTT
TTGAGGCGTCTGGAGCGAATTTCCCAGCATCGAGATGTGTTGGTGAAGCA
TGGTAGTGGCACGGGTGCGCTTGATTCCTTGCCTCGGGAGGATTTGCATT
TGGCGAAGAAGCTAGGCTTTTCGGACAGGCAGTTGGGGGCGTTGCTTGGA
ACGACGGATGATGCGGTCAGATCGAAGCGAGAGGCTGCAGGGATTGTACC
GGCCGTGAAACAGATCGATACGCTGGCGGCTGAGTACCCCGCGAAGACGA
ATTATTTGTATTGCACGTACAATGGGCAGGAGGACGACGTGGTCAAGGGG
GAGGGGGGAGTGATTGTGCTGGGCTCTGGGACATACAGGATCGGAAGCTC
GGTAGAGTTTGATTGGTGTGGTGTGAGTGCGATTCGAGCGTTGCGTGGCA
TGGGGTACCGGACGACGATGGTGAATTATAACCCGGAGACGGTCTCGACG
GATTATGATGAATGCGACCAGCTTTATTTCGATGAGCTGAGCAAGGAGCG
GATTAGAGATATCTACTCCCGGGAGGGCGCTTCAGGTGTGGTTGTTTCGG
TTGGAGGGCAGATCCCGAATAATCTGGCCATGCCCCTGCATAGGGCTGGA
GTGAAAATCATGGGGACGACGCCGGAGATGATTGACCAGGCAGAGGACCG
TGCGAAGTTCTCGGCGTTGATGGAGTCGTTGGGGATCCAGCAGCCAGCAT
GGAAGGAGCTTGCAGATACCGCCTCTGCGTTGGCGTTTGCGGAGGAGGTT
GGATACCCTGTCCTGGTGCGTCCGTCGTACGTGCTTTCGGGGGCGGCAAT
GTCGGTGGCGTTCAGTGATGAGGCGTTGTTGACGGTGCTGGCGCATGCTG
CGGACGTCTCACAGGAGCACCCGGTGGTGATTACCAAGTTTGTGGACGGC
GCGAACGAGATCGAAATGGACGCCGTTGCCATGGATGGGATGGTGGTTGC
CGCGGCCATGCACGAGCACGTGGAGAATGCGGGAGTGCATTCGGGGGATG
CGACGTTGATGTTGCCCCCCCAGCGGATCTCGACCTACACGGCCATGCGT
GTGAACGAGGCCACGAAGAAAATCGCCAAGGCCCTTAATATCACAGGCCC
GTTCAATATGCAGTTTTTGTCCAAGGGGAAAGACGTGAGTGTGATTGAGT
GCAATTTACGCGCGTCTCGCTCTGTACCGTTCGTCTCCAAGACGATGGGG
GTGGATTTTATTGAGGCGGCCGCACGCTGCATGGTGGGGGAGGATGTGAC
TGGGATGAATCTCCCTCAGCTGGGGCAGACCGGCCGTCCCTCGGGGTACG
TGGGTGTGAAGGCTCCCATGTTCTCTTTCACGCGCTTGCGTGGCGCGGAC
CCGGTGTTGGGGGTGGAAATGGCGTCGACTGGCGAGGTCGCGTGCTTTGG
TGCGAACATCCACGAGGCCTTCCTCAAGGCCTTGATCTCGACGGGTTTTA
AGGTCCCGGAGAAGAATATTCTGTTTTCTGTCCAGGACTCCCTGCGTGAC
GACATCATCCACTCTGCTTTCCAGCTGCACTCGTTGGGCTACAACCTGTT
CGCCACCAAGGAGACGTACGAATTCCTCCAGGCCTGCCACGTGCCTTGCC
ACCTCCTCCACTACCCGAACCAGCCCGAGAAACACCCCAATGTCCTCGAG
CACTTGAAGAACGGGAAGATTGATCTGGTTATCAACTTGCCCACACCTGA
GAGTAAGCAGGTGGAGAACAACTACCTTATGCGTAGGACGGCCGTGGATT
TTGGCGTGCCCCTGCTGACGAACATTCATTTGACCAAGCTCTTAGCGGAG
GCAATTACCAAGTACAAGAAAGGAGAGTTGATTGGCGTCCAGTCCAAAAA
TTTGTTTGATTACTACGATGCTGAGGCGCCCGAGGAGGCCTGGACGTCGC
CGTCGGAGTTCCATTAG

protein sequence of NO05G03910.1

>NO05G03910.1-protein ID=NO05G03910.1-protein|Name=NO05G03910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1539bp
MYRALRSPLGSRAMQVFQAHQSGAANRLAPGAGNAVAFSSNQGVKGIILR
RLMATQSDASAKPPTKRAWLVLEDGTRLEGYSFGADKAMNGEVVFSTGMV
GYTESLTDPSYRRQILTLTTPMVGNYGVPDPNVLDELGLPKAFESYKIHA
AGLVVQDYSHHFSHWNAHFSLGDWLKQEGIPAIAGIDTRMLTKKIRSRGA
MLGRIEFEDGAKPELDDVNKKHLVQEVSVPEPRIYGKGNDVKILAVDCGI
KNNIIRHLVRKGAEVKVVPWDHDIVKEMKHHQGLFLSNGPGDPTMCGTTV
EHLRKLVNDPSFMKPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVVN
MLTGKAFITPQNHGYAIDDTTLPAPWKPLFRNLNDQSNEGILHTQKPIFS
AQFHPEAAGGPTDTEFFFDVFLDTVREQRKSIVFPPVKPTPVRPEVKKVL
LLGSGGLSIGQAGEFDYSGAQAIKALKEEGLEVVLMNPNIASVQTNVDDK
SSAKADQVYFLPVNTDYVEQVIKRERPDGLVLSMGGQTALNCGLELHHKG
VLSKYNVKVLGTQIDAIEASEDRQLFSDKLNEINEKIAPSITASTIAQAL
TAAEKIGYPCMIRSAYALGGLGSGICRDAAHLEEMAAKALSLSSQILVEK
SLKGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVVAPSQTLSN
EEYHMLRETALKVVRHLGIVGECNIQYALDPYSLEYCIIEVNARLSRSSA
LASKATGYPLAFVAAKLSLGITLPEIQNSVTKSTQACFEPSLDYIVTKIP
RWDLSKFQGVATEIGSSMKSVGEVMAIGRTWEECIQKAMRMVDPAIEGFQ
MRKRYDDAMALEYELTNPSDKRLYAIAQVFAEKTKTVEDIHELTAIDHWF
LRRLERISQHRDVLVKHGSGTGALDSLPREDLHLAKKLGFSDRQLGALLG
TTDDAVRSKREAAGIVPAVKQIDTLAAEYPAKTNYLYCTYNGQEDDVVKG
EGGVIVLGSGTYRIGSSVEFDWCGVSAIRALRGMGYRTTMVNYNPETVST
DYDECDQLYFDELSKERIRDIYSREGASGVVVSVGGQIPNNLAMPLHRAG
VKIMGTTPEMIDQAEDRAKFSALMESLGIQQPAWKELADTASALAFAEEV
GYPVLVRPSYVLSGAAMSVAFSDEALLTVLAHAADVSQEHPVVITKFVDG
ANEIEMDAVAMDGMVVAAAMHEHVENAGVHSGDATLMLPPQRISTYTAMR
VNEATKKIAKALNITGPFNMQFLSKGKDVSVIECNLRASRSVPFVSKTMG
VDFIEAAARCMVGEDVTGMNLPQLGQTGRPSGYVGVKAPMFSFTRLRGAD
PVLGVEMASTGEVACFGANIHEAFLKALISTGFKVPEKNILFSVQDSLRD
DIIHSAFQLHSLGYNLFATKETYEFLQACHVPCHLLHYPNQPEKHPNVLE
HLKNGKIDLVINLPTPESKQVENNYLMRRTAVDFGVPLLTNIHLTKLLAE
AITKYKKGELIGVQSKNLFDYYDAEAPEEAWTSPSEFH*

mRNA from alignment at chr5:1007637..1012253-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G03910.1 ID=NO05G03910.1|Name=NO05G03910.1|organism=Nannochloropsis oceanica|type=mRNA|length=4617bp|location=Sequence derived from alignment at chr5:1007637..1012253- (Nannochloropsis oceanica)
ATGTATCGCGCTCTGCGTTCTCCGTTGGGGTCGCGAGCCATGCAGGTTTT
TCAAGCGCACCAGTCGGGGGCGGCCAACCGGTTGGCTCCTGGGGCAGGGA
ATGCTGTTGCCTTCTCTTCGAACCAAGGCGTCAAGGGCATCATCCTCCGC
CGCCTCATGGCCACGCAGTCAGACGCCAGCGCAAAGCCGCCCACAAAGCG
GGCATGGTTGGTTTTGGAGGACGGGACACGCCTGGAGGGTTACTCCTTTG
GGGCAGACAAGGCCATGAATGGGGAGGTTGTTTTCTCGACGGGCATGGTG
GGCTACACCGAGTCCTTGACCGACCCTTCCTATCGCCGTCAAATTTTGAC
ACTGACCACGCCCATGGTGGGCAATTACGGAGTTCCGGATCCGAATGTGT
TGGATGAGCTTGGCTTGCCCAAGGCGTTTGAGAGCTACAAGATTCATGCG
GCAGGATTGGTTGTGCAGGACTACTCCCACCACTTCTCGCATTGGAACGC
ACACTTTTCGTTGGGGGACTGGTTAAAGCAGGAGGGCATTCCTGCTATTG
CAGGGATTGATACGAGGATGTTGACGAAGAAGATTCGGTCCCGTGGGGCC
ATGCTTGGGCGGATTGAATTCGAGGATGGGGCGAAGCCTGAGTTGGACGA
CGTGAATAAGAAGCATTTGGTTCAAGAAGTGTCGGTGCCGGAGCCAAGGA
TTTATGGGAAGGGGAATGATGTGAAAATCTTAGCGGTGGATTGCGGGATA
AAGAATAATATCATTCGACACTTGGTGAGGAAAGGGGCGGAGGTCAAAGT
CGTCCCTTGGGACCACGATATTGTCAAGGAAATGAAGCACCACCAGGGCT
TATTCTTGTCCAATGGACCTGGGGATCCGACGATGTGCGGGACAACGGTT
GAGCACTTGAGGAAGCTGGTGAATGACCCGTCTTTCATGAAGCCAATTTT
TGGGATTTGCCTGGGCAATCAGCTATTAGGGTTGGCTGCTGGTGCCAAGG
CGACGAAGCTCCCATTTGGGAACCGTGGACAGAACCAACCGGTGGTGAAC
ATGTTGACCGGGAAGGCGTTCATCACCCCTCAGAACCACGGGTATGCGAT
TGATGACACTACCTTGCCTGCACCTTGGAAGCCCCTGTTTCGTAATTTGA
ACGACCAATCGAATGAGGGGATCTTGCACACCCAGAAGCCGATATTTTCT
GCGCAGTTTCATCCGGAGGCCGCAGGCGGGCCGACGGACACGGAGTTTTT
CTTTGACGTTTTCTTGGACACGGTCCGAGAGCAGAGAAAGTCAATCGTAT
TCCCGCCTGTCAAACCGACGCCGGTGAGGCCCGAAGTGAAGAAGGTGCTG
TTGCTGGGGTCTGGAGGGTTAAGTATTGGGCAGGCAGGTGAGTTTGATTA
TTCCGGGGCACAGGCCATCAAGGCGTTGAAGGAAGAAGGGCTTGAGGTGG
TGTTGATGAACCCGAACATTGCTTCGGTCCAGACGAATGTGGACGACAAG
TCGAGTGCGAAAGCCGATCAAGTGTATTTCTTGCCGGTCAACACGGACTA
CGTTGAGCAGGTGATCAAGAGGGAGAGGCCTGATGGATTGGTGCTGTCCA
TGGGGGGACAGACTGCATTAAATTGTGGGCTGGAATTGCACCATAAGGGC
GTTTTGTCCAAGTATAATGTGAAGGTGCTGGGGACGCAAATAGACGCGAT
TGAGGCTTCGGAGGATCGGCAGTTGTTTTCGGATAAGCTGAATGAGATCA
ATGAAAAGATTGCCCCATCCATCACGGCGTCAACGATCGCGCAGGCTCTG
ACTGCAGCGGAGAAAATTGGGTATCCGTGTATGATCCGTTCTGCGTATGC
GTTGGGCGGGTTGGGGTCAGGGATTTGTAGGGATGCGGCTCATTTGGAAG
AGATGGCAGCGAAAGCCTTAAGTTTGTCTAGTCAGATTTTGGTGGAGAAG
AGTTTGAAGGGCTGGAAAGAGGTAGAGTACGAGGTGGTCAGGGACGCGGC
GGATAACTGTATTACGGTGTGTAATATGGAGAATTTCGATCCGTTGGGCG
TGCATACCGGGGACTCGATTGTAGTGGCGCCGTCACAGACGTTGTCGAAC
GAGGAGTATCACATGTTGAGGGAGACGGCGTTGAAGGTGGTGCGACATTT
GGGAATCGTCGGGGAGTGTAACATTCAGTATGCGCTTGATCCGTATTCGC
TTGAGTATTGTATTATCGAGGTGAATGCGCGGTTATCTCGTTCGTCGGCG
TTGGCCAGTAAGGCGACTGGATACCCTTTGGCGTTTGTGGCCGCAAAATT
GTCGTTGGGGATTACCCTGCCGGAGATTCAGAACAGTGTGACCAAGAGCA
CGCAGGCTTGTTTTGAACCGAGTCTGGATTATATTGTCACGAAGATCCCG
AGGTGGGATTTGAGTAAGTTCCAGGGAGTGGCGACTGAGATCGGGTCATC
GATGAAGTCGGTAGGGGAGGTGATGGCCATCGGCCGGACGTGGGAGGAGT
GCATCCAGAAGGCGATGCGCATGGTGGACCCGGCGATAGAAGGATTTCAG
ATGAGGAAGAGGTATGATGACGCGATGGCGTTGGAGTATGAGCTGACAAA
TCCGAGTGACAAGAGGTTGTATGCGATCGCGCAGGTATTTGCGGAGAAGA
CCAAGACGGTGGAAGACATTCATGAGTTGACGGCTATTGATCACTGGTTT
TTGAGGCGTCTGGAGCGAATTTCCCAGCATCGAGATGTGTTGGTGAAGCA
TGGTAGTGGCACGGGTGCGCTTGATTCCTTGCCTCGGGAGGATTTGCATT
TGGCGAAGAAGCTAGGCTTTTCGGACAGGCAGTTGGGGGCGTTGCTTGGA
ACGACGGATGATGCGGTCAGATCGAAGCGAGAGGCTGCAGGGATTGTACC
GGCCGTGAAACAGATCGATACGCTGGCGGCTGAGTACCCCGCGAAGACGA
ATTATTTGTATTGCACGTACAATGGGCAGGAGGACGACGTGGTCAAGGGG
GAGGGGGGAGTGATTGTGCTGGGCTCTGGGACATACAGGATCGGAAGCTC
GGTAGAGTTTGATTGGTGTGGTGTGAGTGCGATTCGAGCGTTGCGTGGCA
TGGGGTACCGGACGACGATGGTGAATTATAACCCGGAGACGGTCTCGACG
GATTATGATGAATGCGACCAGCTTTATTTCGATGAGCTGAGCAAGGAGCG
GATTAGAGATATCTACTCCCGGGAGGGCGCTTCAGGTGTGGTTGTTTCGG
TTGGAGGGCAGATCCCGAATAATCTGGCCATGCCCCTGCATAGGGCTGGA
GTGAAAATCATGGGGACGACGCCGGAGATGATTGACCAGGCAGAGGACCG
TGCGAAGTTCTCGGCGTTGATGGAGTCGTTGGGGATCCAGCAGCCAGCAT
GGAAGGAGCTTGCAGATACCGCCTCTGCGTTGGCGTTTGCGGAGGAGGTT
GGATACCCTGTCCTGGTGCGTCCGTCGTACGTGCTTTCGGGGGCGGCAAT
GTCGGTGGCGTTCAGTGATGAGGCGTTGTTGACGGTGCTGGCGCATGCTG
CGGACGTCTCACAGGAGCACCCGGTGGTGATTACCAAGTTTGTGGACGGC
GCGAACGAGATCGAAATGGACGCCGTTGCCATGGATGGGATGGTGGTTGC
CGCGGCCATGCACGAGCACGTGGAGAATGCGGGAGTGCATTCGGGGGATG
CGACGTTGATGTTGCCCCCCCAGCGGATCTCGACCTACACGGCCATGCGT
GTGAACGAGGCCACGAAGAAAATCGCCAAGGCCCTTAATATCACAGGCCC
GTTCAATATGCAGTTTTTGTCCAAGGGGAAAGACGTGAGTGTGATTGAGT
GCAATTTACGCGCGTCTCGCTCTGTACCGTTCGTCTCCAAGACGATGGGG
GTGGATTTTATTGAGGCGGCCGCACGCTGCATGGTGGGGGAGGATGTGAC
TGGGATGAATCTCCCTCAGCTGGGGCAGACCGGCCGTCCCTCGGGGTACG
TGGGTGTGAAGGCTCCCATGTTCTCTTTCACGCGCTTGCGTGGCGCGGAC
CCGGTGTTGGGGGTGGAAATGGCGTCGACTGGCGAGGTCGCGTGCTTTGG
TGCGAACATCCACGAGGCCTTCCTCAAGGCCTTGATCTCGACGGGTTTTA
AGGTCCCGGAGAAGAATATTCTGTTTTCTGTCCAGGACTCCCTGCGTGAC
GACATCATCCACTCTGCTTTCCAGCTGCACTCGTTGGGCTACAACCTGTT
CGCCACCAAGGAGACGTACGAATTCCTCCAGGCCTGCCACGTGCCTTGCC
ACCTCCTCCACTACCCGAACCAGCCCGAGAAACACCCCAATGTCCTCGAG
CACTTGAAGAACGGGAAGATTGATCTGGTTATCAACTTGCCCACACCTGA
GAGTAAGCAGGTGGAGAACAACTACCTTATGCGTAGGACGGCCGTGGATT
TTGGCGTGCCCCTGCTGACGAACATTCATTTGACCAAGCTCTTAGCGGAG
GCAATTACCAAGTACAAGAAAGGAGAGTTGATTGGCGTCCAGTCCAAAAA
TTTGTTTGATTACTACGATGCTGAGGCGCCCGAGGAGGCCTGGACGTCGC
CGTCGGAGTTCCATTAG

Coding sequence (CDS) from alignment at chr5:1007637..1012253-

>NO05G03910.1 ID=NO05G03910.1|Name=NO05G03910.1|organism=Nannochloropsis oceanica|type=CDS|length=4617bp|location=Sequence derived from alignment at chr5:1007637..1012253- (Nannochloropsis oceanica)
ATGTATCGCGCTCTGCGTTCTCCGTTGGGGTCGCGAGCCATGCAGGTTTT
TCAAGCGCACCAGTCGGGGGCGGCCAACCGGTTGGCTCCTGGGGCAGGGA
ATGCTGTTGCCTTCTCTTCGAACCAAGGCGTCAAGGGCATCATCCTCCGC
CGCCTCATGGCCACGCAGTCAGACGCCAGCGCAAAGCCGCCCACAAAGCG
GGCATGGTTGGTTTTGGAGGACGGGACACGCCTGGAGGGTTACTCCTTTG
GGGCAGACAAGGCCATGAATGGGGAGGTTGTTTTCTCGACGGGCATGGTG
GGCTACACCGAGTCCTTGACCGACCCTTCCTATCGCCGTCAAATTTTGAC
ACTGACCACGCCCATGGTGGGCAATTACGGAGTTCCGGATCCGAATGTGT
TGGATGAGCTTGGCTTGCCCAAGGCGTTTGAGAGCTACAAGATTCATGCG
GCAGGATTGGTTGTGCAGGACTACTCCCACCACTTCTCGCATTGGAACGC
ACACTTTTCGTTGGGGGACTGGTTAAAGCAGGAGGGCATTCCTGCTATTG
CAGGGATTGATACGAGGATGTTGACGAAGAAGATTCGGTCCCGTGGGGCC
ATGCTTGGGCGGATTGAATTCGAGGATGGGGCGAAGCCTGAGTTGGACGA
CGTGAATAAGAAGCATTTGGTTCAAGAAGTGTCGGTGCCGGAGCCAAGGA
TTTATGGGAAGGGGAATGATGTGAAAATCTTAGCGGTGGATTGCGGGATA
AAGAATAATATCATTCGACACTTGGTGAGGAAAGGGGCGGAGGTCAAAGT
CGTCCCTTGGGACCACGATATTGTCAAGGAAATGAAGCACCACCAGGGCT
TATTCTTGTCCAATGGACCTGGGGATCCGACGATGTGCGGGACAACGGTT
GAGCACTTGAGGAAGCTGGTGAATGACCCGTCTTTCATGAAGCCAATTTT
TGGGATTTGCCTGGGCAATCAGCTATTAGGGTTGGCTGCTGGTGCCAAGG
CGACGAAGCTCCCATTTGGGAACCGTGGACAGAACCAACCGGTGGTGAAC
ATGTTGACCGGGAAGGCGTTCATCACCCCTCAGAACCACGGGTATGCGAT
TGATGACACTACCTTGCCTGCACCTTGGAAGCCCCTGTTTCGTAATTTGA
ACGACCAATCGAATGAGGGGATCTTGCACACCCAGAAGCCGATATTTTCT
GCGCAGTTTCATCCGGAGGCCGCAGGCGGGCCGACGGACACGGAGTTTTT
CTTTGACGTTTTCTTGGACACGGTCCGAGAGCAGAGAAAGTCAATCGTAT
TCCCGCCTGTCAAACCGACGCCGGTGAGGCCCGAAGTGAAGAAGGTGCTG
TTGCTGGGGTCTGGAGGGTTAAGTATTGGGCAGGCAGGTGAGTTTGATTA
TTCCGGGGCACAGGCCATCAAGGCGTTGAAGGAAGAAGGGCTTGAGGTGG
TGTTGATGAACCCGAACATTGCTTCGGTCCAGACGAATGTGGACGACAAG
TCGAGTGCGAAAGCCGATCAAGTGTATTTCTTGCCGGTCAACACGGACTA
CGTTGAGCAGGTGATCAAGAGGGAGAGGCCTGATGGATTGGTGCTGTCCA
TGGGGGGACAGACTGCATTAAATTGTGGGCTGGAATTGCACCATAAGGGC
GTTTTGTCCAAGTATAATGTGAAGGTGCTGGGGACGCAAATAGACGCGAT
TGAGGCTTCGGAGGATCGGCAGTTGTTTTCGGATAAGCTGAATGAGATCA
ATGAAAAGATTGCCCCATCCATCACGGCGTCAACGATCGCGCAGGCTCTG
ACTGCAGCGGAGAAAATTGGGTATCCGTGTATGATCCGTTCTGCGTATGC
GTTGGGCGGGTTGGGGTCAGGGATTTGTAGGGATGCGGCTCATTTGGAAG
AGATGGCAGCGAAAGCCTTAAGTTTGTCTAGTCAGATTTTGGTGGAGAAG
AGTTTGAAGGGCTGGAAAGAGGTAGAGTACGAGGTGGTCAGGGACGCGGC
GGATAACTGTATTACGGTGTGTAATATGGAGAATTTCGATCCGTTGGGCG
TGCATACCGGGGACTCGATTGTAGTGGCGCCGTCACAGACGTTGTCGAAC
GAGGAGTATCACATGTTGAGGGAGACGGCGTTGAAGGTGGTGCGACATTT
GGGAATCGTCGGGGAGTGTAACATTCAGTATGCGCTTGATCCGTATTCGC
TTGAGTATTGTATTATCGAGGTGAATGCGCGGTTATCTCGTTCGTCGGCG
TTGGCCAGTAAGGCGACTGGATACCCTTTGGCGTTTGTGGCCGCAAAATT
GTCGTTGGGGATTACCCTGCCGGAGATTCAGAACAGTGTGACCAAGAGCA
CGCAGGCTTGTTTTGAACCGAGTCTGGATTATATTGTCACGAAGATCCCG
AGGTGGGATTTGAGTAAGTTCCAGGGAGTGGCGACTGAGATCGGGTCATC
GATGAAGTCGGTAGGGGAGGTGATGGCCATCGGCCGGACGTGGGAGGAGT
GCATCCAGAAGGCGATGCGCATGGTGGACCCGGCGATAGAAGGATTTCAG
ATGAGGAAGAGGTATGATGACGCGATGGCGTTGGAGTATGAGCTGACAAA
TCCGAGTGACAAGAGGTTGTATGCGATCGCGCAGGTATTTGCGGAGAAGA
CCAAGACGGTGGAAGACATTCATGAGTTGACGGCTATTGATCACTGGTTT
TTGAGGCGTCTGGAGCGAATTTCCCAGCATCGAGATGTGTTGGTGAAGCA
TGGTAGTGGCACGGGTGCGCTTGATTCCTTGCCTCGGGAGGATTTGCATT
TGGCGAAGAAGCTAGGCTTTTCGGACAGGCAGTTGGGGGCGTTGCTTGGA
ACGACGGATGATGCGGTCAGATCGAAGCGAGAGGCTGCAGGGATTGTACC
GGCCGTGAAACAGATCGATACGCTGGCGGCTGAGTACCCCGCGAAGACGA
ATTATTTGTATTGCACGTACAATGGGCAGGAGGACGACGTGGTCAAGGGG
GAGGGGGGAGTGATTGTGCTGGGCTCTGGGACATACAGGATCGGAAGCTC
GGTAGAGTTTGATTGGTGTGGTGTGAGTGCGATTCGAGCGTTGCGTGGCA
TGGGGTACCGGACGACGATGGTGAATTATAACCCGGAGACGGTCTCGACG
GATTATGATGAATGCGACCAGCTTTATTTCGATGAGCTGAGCAAGGAGCG
GATTAGAGATATCTACTCCCGGGAGGGCGCTTCAGGTGTGGTTGTTTCGG
TTGGAGGGCAGATCCCGAATAATCTGGCCATGCCCCTGCATAGGGCTGGA
GTGAAAATCATGGGGACGACGCCGGAGATGATTGACCAGGCAGAGGACCG
TGCGAAGTTCTCGGCGTTGATGGAGTCGTTGGGGATCCAGCAGCCAGCAT
GGAAGGAGCTTGCAGATACCGCCTCTGCGTTGGCGTTTGCGGAGGAGGTT
GGATACCCTGTCCTGGTGCGTCCGTCGTACGTGCTTTCGGGGGCGGCAAT
GTCGGTGGCGTTCAGTGATGAGGCGTTGTTGACGGTGCTGGCGCATGCTG
CGGACGTCTCACAGGAGCACCCGGTGGTGATTACCAAGTTTGTGGACGGC
GCGAACGAGATCGAAATGGACGCCGTTGCCATGGATGGGATGGTGGTTGC
CGCGGCCATGCACGAGCACGTGGAGAATGCGGGAGTGCATTCGGGGGATG
CGACGTTGATGTTGCCCCCCCAGCGGATCTCGACCTACACGGCCATGCGT
GTGAACGAGGCCACGAAGAAAATCGCCAAGGCCCTTAATATCACAGGCCC
GTTCAATATGCAGTTTTTGTCCAAGGGGAAAGACGTGAGTGTGATTGAGT
GCAATTTACGCGCGTCTCGCTCTGTACCGTTCGTCTCCAAGACGATGGGG
GTGGATTTTATTGAGGCGGCCGCACGCTGCATGGTGGGGGAGGATGTGAC
TGGGATGAATCTCCCTCAGCTGGGGCAGACCGGCCGTCCCTCGGGGTACG
TGGGTGTGAAGGCTCCCATGTTCTCTTTCACGCGCTTGCGTGGCGCGGAC
CCGGTGTTGGGGGTGGAAATGGCGTCGACTGGCGAGGTCGCGTGCTTTGG
TGCGAACATCCACGAGGCCTTCCTCAAGGCCTTGATCTCGACGGGTTTTA
AGGTCCCGGAGAAGAATATTCTGTTTTCTGTCCAGGACTCCCTGCGTGAC
GACATCATCCACTCTGCTTTCCAGCTGCACTCGTTGGGCTACAACCTGTT
CGCCACCAAGGAGACGTACGAATTCCTCCAGGCCTGCCACGTGCCTTGCC
ACCTCCTCCACTACCCGAACCAGCCCGAGAAACACCCCAATGTCCTCGAG
CACTTGAAGAACGGGAAGATTGATCTGGTTATCAACTTGCCCACACCTGA
GAGTAAGCAGGTGGAGAACAACTACCTTATGCGTAGGACGGCCGTGGATT
TTGGCGTGCCCCTGCTGACGAACATTCATTTGACCAAGCTCTTAGCGGAG
GCAATTACCAAGTACAAGAAAGGAGAGTTGATTGGCGTCCAGTCCAAAAA
TTTGTTTGATTACTACGATGCTGAGGCGCCCGAGGAGGCCTGGACGTCGC
CGTCGGAGTTCCATTAG

Synonyms

Publications