NO05G03600.1, NO05G03600.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G03600.1
Unique NameNO05G03600.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4117
Alignment locationchr5:948342..952458 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:948342..952458 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G03600.1 vs.
Match: EWM28014.1 (rna-binding protein 26 [Nannochloropsis gaditana])

HSP 1 Score: 117.9 bits (294), Expect = 2.400e-22
Identity = 89/172 (51.74%), Postives = 108/172 (62.79%), Query Frame = 0
Query:    1 MSLPQGEDRKKLQAWLQRQLRPLSETSPVILSKFVLQLLEAADKGEAEKKAECLRELDLYLTHATAKFVDRLFHALETGSY--LHEQQQQQQEQLLY------DGGLQEDGER--QYNRQGG--TNDDVSQGSGRGSRGLGGYEDEEEE--EERGRNGQYGEEKYEGDGYQQ 159
            M +P GE+RKKL AWLQ+QLRPLSETSP ILSKFVLQLL+AADK EAE +AECLREL LYL  +T  FVD LF AL TGSY  L  + +QQ  Q +Y      D G   +GER  +Y   GG  T++ V +G  RGS     +E +E +   E G +   G     GDG +Q
Sbjct:    1 MIVPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPEQQNAQGIYEKGGNWDRGSDGEGERSDEYEEAGGGDTDEGVDRGGHRGS-----HESQEWDILYEEGTDA-VGHGYSTGDGMEQ 166          
The following BLAST results are available for this feature:
BLAST of NO05G03600.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28014.12.400e-2251.74rna-binding protein 26 [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03600NO05G03600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G03600.1NO05G03600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G03600.1.cds1NO05G03600.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G03600.1 ID=NO05G03600.1|Name=NO05G03600.1|organism=Nannochloropsis oceanica|type=mRNA|length=4117bp
AACAGGTTCAATACCTCCGGATGCAGTACTTCCAATTAAAATAGAAGTAG
AAGAAAGCCGAACTAATGAGCCTGCCCCAAGGGGAAGACCGGAAGAAGCT
GCAAGCCTGGCTGCAACGGCAACTCCGACCCCTGAGCGAGACAAGCCCCG
TCATACTCAGCAAATTCGTATTGCAACTTTTAGAGGCTGCAGACAAGGGG
GAAGCGGAAAAAAAGGCCGAGTGTTTGCGGGAGCTTGACTTGTATTTGAC
GCATGCCACGGCCAAGTTTGTGGATCGTCTGTTCCATGCCCTCGAGACGG
GGAGTTATCTGCACGAACAGCAGCAGCAGCAGCAGGAGCAGTTACTCTAT
GATGGTGGTCTACAAGAAGATGGCGAGCGCCAGTACAATCGACAGGGGGG
AACTAACGACGACGTCAGCCAGGGAAGCGGGAGAGGGAGTCGGGGGCTAG
GAGGGTACGAGGACGAGGAGGAGGAGGAAGAAAGAGGCCGAAATGGTCAA
TATGGCGAAGAGAAATATGAGGGTGATGGGTATCAGCAAGCGCACGGATC
TGGCGTGGAGTCGGTAGCTTTCGCGGAAGATCCTTATGCGCATTATGATC
GAGAGGGGGATGAGGGAGGGATGGAAGGAGGTGGTGGTAGAGGACGGAGG
CGTGGAGGGAGCGATGCCTCAGCGTCTTCGGAGGATGACGACGAGGATGA
GGACGAGAGTGAAGGGCGGAGGGGTGGTCGTGGTGCCCGGAGAAGGCGAC
TGGAGCAACGGAGCAGGAGCAGGAGTCCTGGTCAAAGAAATCCACCACCG
CAGACTTATCCACCCCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCCGCGACAGCAGCCGTACCAGCAACAGAGACTACCGCAACAACAGCAGC
AACAGCAGCAACAGCAGTCACCCCACAGTGAGAGTCATTGTCGGGATTGG
GATGGCGGACGGAATGTACGCTTTCCTTCACGGCAGCAGCCGCCGCAGCA
GCACCAATACCCTCAGCAGGGACCATGGCAAGGAGTGCAAGGCGGCGGTC
CTCTTGGTGGTCCTATAGGAGGAGGAAGAGGAATGATTGTGGGCGGGCCC
AAAACACCACCACCACGAGGGTGGGATGGAGGAGGAGGAGTAAGGCGGGG
TCCACCACCTCCTCCTCACCACATGCAGATGCAAGGCTCCCCTCCTCCCC
TCCCTCATTACAGCCAACCTCGCCCTCCTCCTCTACCTCGTCACCATCAT
CCTAACGGCATGGGCCGAGGTGGACCCCTCCTACCTCCCCACGCTCCCCC
GCACCCACCCTCCGTCTCCTCCTCCTCCACCTCCCGTCAACCCCCCATGA
ATGGTCATAATGGGAGAGATTATCCTCCCCCTCCCTCCCACCCTGCTCCT
CCTCCTCTTCCCTCTTCTATGCCACGTCGCCACGGCCCTTCTCCTGATTA
CGGTGGCCGAGGGGCTCCACCCCCTTCCCCCTCCTCTTCCGCCTTCGCGC
CCTTGCCTCCCCACCCTCCCCCCTACTACGACAATGGAAGCAGGGGGAGA
GGAAGGGAGGGGGTAATGGGTGGAAGGGGGGGAGCGAATCCATTTGGTAT
GGCAGGACGAGGAGGAGGAATGGGCGGAGGAAGAGATGGGGAGAGAGTTG
TTCCTCCTCCCCCTCGTCCTCCCCTCCCACCTGGCCCCCCTCCATCTCAC
AAGGGAACGAGTGGAGGGAGGGAGGGAGGAGGAGAAGGGTGGGATAGGAA
AAGGGATAGAAGCTGGGAACGGGAGACGGAAAGGGGTCTTGCACCACCCC
GAGGAGGAGGACGAGGAGGAGGAGGAGGAGGACGAGGGCCGCCATCCTTG
GGAGGACCGTACGACAGCCCCAACGGCGGCCCACTGCCACCACTCGCAGC
AAGGGGAGGGGGGATGAAGGGAGGAAGAGGAGGGCAAATGAACGCCATAC
GTCCGGGTATACAGGCCTCGCCCATGAACGGACCACCACCACAAGAATCG
CCACTCCACCACCCACTAGGCAGGGAGGGAGGGAGGGAAGGAGGAGGGGG
GCCAGATGGCCGCCGGACAATTTTTTTGCTGAATGTTCCCCCCTTCCTAA
CACCCTCCCTTGTGGGAGACCACTATTCTCGTTTCGGCCATATCGTCAAG
ATCGTTTTCGAGCCGTTGCTTGGGGGGCCCAATAAGGGGAAAAACAAGGT
GTATATTCAATATGCGTCGCACAGAGAGGCAGAAGCGGCGCAGGTGGCAG
TGGATGTACCGATGGGGAGGACGGGCTTCCGGCCTATCATGGGGTATCAC
CACTCGAATCTGGTGGAGGCAGGGAGGCAACAGCAGGAGAGGTGGGTGGA
CAGGATGGGCAGCAGTGGAGGCGGTGAAGGAGGAGGGAGGGGAGGTGGAA
TAGAGGGGGCGAGGGGGATGCGGGTAGTGGATAAGCTGGGGGGGATTGCG
GGTGAGGTTGGTGGAGGAGGAGGGGCTGGAGGGGACCGAGGACCACCGTT
TCCTCCTTTCCCCTCTTCCAGACCTTACACACAGGATCGAGGAGGAGGAG
AAGGAGGAGGAGGAGGAAAAGGAGGAGGGTACCCTCCTCCTCCCCGCGGG
CCGCCGCCGCCTTCTTCTTTCGCTGGAGGGGTTCCACAAATCAAGCGACC
GCGTTATGATGCCCTCTCTCACCACCACCACCACCACCACCAGCAGCAGC
AGCAGCAGCGACTCCCCACACAAGCACAGCTGCAGCAGCAGCCGCGCCCA
CCTCCGACGGGCCACCCGCAGCAGCCGCCACACCCGCAGCAGCCGCAGAG
TCGGTCTCCGTTTCTTCGTCCTCCTCCCAGGGGTGCACCCATCCCATTTG
ATTCGCGGCCTCCTGCACAGCCACCCCGCCCCAAGCAGCCTCCTAGAGAA
CAAGCACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCTC
CTCTTCCTCCCCGTCGTCTAACCCTCCTCCTTCCCCTTCCATCGCTCTTT
CCACATCCTCAACCACCGCAACATCCTCCTCCCTCCCTTCCTCATCGACC
CACCCCTCCTCCGCCGCCCTCACTCGTCAACGCCTTGAGCTGGCCAAGAA
AAAGGAAGCCATGTACAGCACGCAAAAGTCCCTCCACGAAAAACTGGTGG
CAGCTGCGGTTGCTACTGCTACTGCGGCAGCAGCAACAGCAAATCCTACT
GGTGTTACTACCGAAAACGCAGAGATGGAGAAGGCCAAAAAGGAGCTGTT
GGACACGGAGGTGAAGTTGTTCGAGGCGAGAGAAGAGGTGCGGCGTTTGA
CGCAGGCGGTAGCACAATTGCATTTGGCAGGAGGAGGGGAAGGAAGAGCT
GGGGGAGGGAGGGGAGGAGCAGGGGTGAAAGTGACGACGCATGCCCCTGC
AGGAGGAGGGAGGGGTGGAGGGAGGATAGGTGGAAGAGGAGTGGGGGGAG
GGAGGGGGGGAGGGTTGCGGATTGACAACCGGACGACGTGCCTGAAGTTG
GTGAACAAACCGCAGGGTGTTGCTCCTGGTTCCCTGCAGAGCTATTTCAA
TAACTTCGGGACTGTGGAACATGTAAAGGTTCTGGTGGAGGGGAAGGGAG
GAGGGGAGGGAGGGGAGGAGTCGGCGGTCGTGAAATTTGTCACGAGAAGG
GCGGCCGAGAATGCGAAGGCGAATGCCAAGTACTTGGGCTCACATGCGTT
GGTGTTGCAATGGCATGATGCTTCAGCTGCTGCTGCTCCTCCTCCTTTAT
CAACGACAATGAACGAAGCGACGACGGCTGTTGGTGTTGCTGCTCCCGTT
GTTGAGGGAGAGGGGGGGGAAGGGGAGGTGGGAGAAGGAGCAGGGCAGGG
AGGAGAGGAGGGGGAAGAGGGGGGAGTAAGTCTCTTGGAGCAGGAGGAGG
ATTTGGATGCGCTTTTTTCTTAATAACGAGGAGAGGAAAGGAGGTCAAGA
AGAAAAATGCGCTTTCTTTAGAGAAAAGGGTGGTAAGGAGAAGGAAGCCC
TGGACTTGGAGCGAGTCCGGAGGGGGGGAGGGAGGGAAGGAGAGAGGGAA
GACGCGGACTGCGACAGATAATGCCCAAAGAATATAAATAGAAAGAGATG
ATAGGTGCAATGTTAAA
back to top

protein sequence of NO05G03600.1

>NO05G03600.1-protein ID=NO05G03600.1-protein|Name=NO05G03600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1286bp
MSLPQGEDRKKLQAWLQRQLRPLSETSPVILSKFVLQLLEAADKGEAEKK
AECLRELDLYLTHATAKFVDRLFHALETGSYLHEQQQQQQEQLLYDGGLQ
EDGERQYNRQGGTNDDVSQGSGRGSRGLGGYEDEEEEEERGRNGQYGEEK
YEGDGYQQAHGSGVESVAFAEDPYAHYDREGDEGGMEGGGGRGRRRGGSD
ASASSEDDDEDEDESEGRRGGRGARRRRLEQRSRSRSPGQRNPPPQTYPP
PQQQQQQQQQQQPRQQPYQQQRLPQQQQQQQQQQSPHSESHCRDWDGGRN
VRFPSRQQPPQQHQYPQQGPWQGVQGGGPLGGPIGGGRGMIVGGPKTPPP
RGWDGGGGVRRGPPPPPHHMQMQGSPPPLPHYSQPRPPPLPRHHHPNGMG
RGGPLLPPHAPPHPPSVSSSSTSRQPPMNGHNGRDYPPPPSHPAPPPLPS
SMPRRHGPSPDYGGRGAPPPSPSSSAFAPLPPHPPPYYDNGSRGRGREGV
MGGRGGANPFGMAGRGGGMGGGRDGERVVPPPPRPPLPPGPPPSHKGTSG
GREGGGEGWDRKRDRSWERETERGLAPPRGGGRGGGGGGRGPPSLGGPYD
SPNGGPLPPLAARGGGMKGGRGGQMNAIRPGIQASPMNGPPPQESPLHHP
LGREGGREGGGGPDGRRTIFLLNVPPFLTPSLVGDHYSRFGHIVKIVFEP
LLGGPNKGKNKVYIQYASHREAEAAQVAVDVPMGRTGFRPIMGYHHSNLV
EAGRQQQERWVDRMGSSGGGEGGGRGGGIEGARGMRVVDKLGGIAGEVGG
GGGAGGDRGPPFPPFPSSRPYTQDRGGGEGGGGGKGGGYPPPPRGPPPPS
SFAGGVPQIKRPRYDALSHHHHHHHQQQQQQRLPTQAQLQQQPRPPPTGH
PQQPPHPQQPQSRSPFLRPPPRGAPIPFDSRPPAQPPRPKQPPREQAPQQ
QQQQQQQQQPSSSSSPSSNPPPSPSIALSTSSTTATSSSLPSSSTHPSSA
ALTRQRLELAKKKEAMYSTQKSLHEKLVAAAVATATAAAATANPTGVTTE
NAEMEKAKKELLDTEVKLFEAREEVRRLTQAVAQLHLAGGGEGRAGGGRG
GAGVKVTTHAPAGGGRGGGRIGGRGVGGGRGGGLRIDNRTTCLKLVNKPQ
GVAPGSLQSYFNNFGTVEHVKVLVEGKGGGEGGEESAVVKFVTRRAAENA
KANAKYLGSHALVLQWHDASAAAAPPPLSTTMNEATTAVGVAAPVVEGEG
GEGEVGEGAGQGGEEGEEGGVSLLEQEEDLDALFS*
back to top

mRNA from alignment at chr5:948342..952458-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G03600.1 ID=NO05G03600.1|Name=NO05G03600.1|organism=Nannochloropsis oceanica|type=mRNA|length=4117bp|location=Sequence derived from alignment at chr5:948342..952458- (Nannochloropsis oceanica)
AACAGGTTCAATACCTCCGGATGCAGTACTTCCAATTAAAATAGAAGTAG AAGAAAGCCGAACTAATGAGCCTGCCCCAAGGGGAAGACCGGAAGAAGCT GCAAGCCTGGCTGCAACGGCAACTCCGACCCCTGAGCGAGACAAGCCCCG TCATACTCAGCAAATTCGTATTGCAACTTTTAGAGGCTGCAGACAAGGGG GAAGCGGAAAAAAAGGCCGAGTGTTTGCGGGAGCTTGACTTGTATTTGAC GCATGCCACGGCCAAGTTTGTGGATCGTCTGTTCCATGCCCTCGAGACGG GGAGTTATCTGCACGAACAGCAGCAGCAGCAGCAGGAGCAGTTACTCTAT GATGGTGGTCTACAAGAAGATGGCGAGCGCCAGTACAATCGACAGGGGGG AACTAACGACGACGTCAGCCAGGGAAGCGGGAGAGGGAGTCGGGGGCTAG GAGGGTACGAGGACGAGGAGGAGGAGGAAGAAAGAGGCCGAAATGGTCAA TATGGCGAAGAGAAATATGAGGGTGATGGGTATCAGCAAGCGCACGGATC TGGCGTGGAGTCGGTAGCTTTCGCGGAAGATCCTTATGCGCATTATGATC GAGAGGGGGATGAGGGAGGGATGGAAGGAGGTGGTGGTAGAGGACGGAGG CGTGGAGGGAGCGATGCCTCAGCGTCTTCGGAGGATGACGACGAGGATGA GGACGAGAGTGAAGGGCGGAGGGGTGGTCGTGGTGCCCGGAGAAGGCGAC TGGAGCAACGGAGCAGGAGCAGGAGTCCTGGTCAAAGAAATCCACCACCG CAGACTTATCCACCCCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCCGCGACAGCAGCCGTACCAGCAACAGAGACTACCGCAACAACAGCAGC AACAGCAGCAACAGCAGTCACCCCACAGTGAGAGTCATTGTCGGGATTGG GATGGCGGACGGAATGTACGCTTTCCTTCACGGCAGCAGCCGCCGCAGCA GCACCAATACCCTCAGCAGGGACCATGGCAAGGAGTGCAAGGCGGCGGTC CTCTTGGTGGTCCTATAGGAGGAGGAAGAGGAATGATTGTGGGCGGGCCC AAAACACCACCACCACGAGGGTGGGATGGAGGAGGAGGAGTAAGGCGGGG TCCACCACCTCCTCCTCACCACATGCAGATGCAAGGCTCCCCTCCTCCCC TCCCTCATTACAGCCAACCTCGCCCTCCTCCTCTACCTCGTCACCATCAT CCTAACGGCATGGGCCGAGGTGGACCCCTCCTACCTCCCCACGCTCCCCC GCACCCACCCTCCGTCTCCTCCTCCTCCACCTCCCGTCAACCCCCCATGA ATGGTCATAATGGGAGAGATTATCCTCCCCCTCCCTCCCACCCTGCTCCT CCTCCTCTTCCCTCTTCTATGCCACGTCGCCACGGCCCTTCTCCTGATTA CGGTGGCCGAGGGGCTCCACCCCCTTCCCCCTCCTCTTCCGCCTTCGCGC CCTTGCCTCCCCACCCTCCCCCCTACTACGACAATGGAAGCAGGGGGAGA GGAAGGGAGGGGGTAATGGGTGGAAGGGGGGGAGCGAATCCATTTGGTAT GGCAGGACGAGGAGGAGGAATGGGCGGAGGAAGAGATGGGGAGAGAGTTG TTCCTCCTCCCCCTCGTCCTCCCCTCCCACCTGGCCCCCCTCCATCTCAC AAGGGAACGAGTGGAGGGAGGGAGGGAGGAGGAGAAGGGTGGGATAGGAA AAGGGATAGAAGCTGGGAACGGGAGACGGAAAGGGGTCTTGCACCACCCC GAGGAGGAGGACGAGGAGGAGGAGGAGGAGGACGAGGGCCGCCATCCTTG GGAGGACCGTACGACAGCCCCAACGGCGGCCCACTGCCACCACTCGCAGC AAGGGGAGGGGGGATGAAGGGAGGAAGAGGAGGGCAAATGAACGCCATAC GTCCGGGTATACAGGCCTCGCCCATGAACGGACCACCACCACAAGAATCG CCACTCCACCACCCACTAGGCAGGGAGGGAGGGAGGGAAGGAGGAGGGGG GCCAGATGGCCGCCGGACAATTTTTTTGCTGAATGTTCCCCCCTTCCTAA CACCCTCCCTTGTGGGAGACCACTATTCTCGTTTCGGCCATATCGTCAAG ATCGTTTTCGAGCCGTTGCTTGGGGGGCCCAATAAGGGGAAAAACAAGGT GTATATTCAATATGCGTCGCACAGAGAGGCAGAAGCGGCGCAGGTGGCAG TGGATGTACCGATGGGGAGGACGGGCTTCCGGCCTATCATGGGGTATCAC CACTCGAATCTGGTGGAGGCAGGGAGGCAACAGCAGGAGAGGTGGGTGGA CAGGATGGGCAGCAGTGGAGGCGGTGAAGGAGGAGGGAGGGGAGGTGGAA TAGAGGGGGCGAGGGGGATGCGGGTAGTGGATAAGCTGGGGGGGATTGCG GGTGAGGTTGGTGGAGGAGGAGGGGCTGGAGGGGACCGAGGACCACCGTT TCCTCCTTTCCCCTCTTCCAGACCTTACACACAGGATCGAGGAGGAGGAG AAGGAGGAGGAGGAGGAAAAGGAGGAGGGTACCCTCCTCCTCCCCGCGGG CCGCCGCCGCCTTCTTCTTTCGCTGGAGGGGTTCCACAAATCAAGCGACC GCGTTATGATGCCCTCTCTCACCACCACCACCACCACCACCAGCAGCAGC AGCAGCAGCGACTCCCCACACAAGCACAGCTGCAGCAGCAGCCGCGCCCA CCTCCGACGGGCCACCCGCAGCAGCCGCCACACCCGCAGCAGCCGCAGAG TCGGTCTCCGTTTCTTCGTCCTCCTCCCAGGGGTGCACCCATCCCATTTG ATTCGCGGCCTCCTGCACAGCCACCCCGCCCCAAGCAGCCTCCTAGAGAA CAAGCACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCTC CTCTTCCTCCCCGTCGTCTAACCCTCCTCCTTCCCCTTCCATCGCTCTTT CCACATCCTCAACCACCGCAACATCCTCCTCCCTCCCTTCCTCATCGACC CACCCCTCCTCCGCCGCCCTCACTCGTCAACGCCTTGAGCTGGCCAAGAA AAAGGAAGCCATGTACAGCACGCAAAAGTCCCTCCACGAAAAACTGGTGG CAGCTGCGGTTGCTACTGCTACTGCGGCAGCAGCAACAGCAAATCCTACT GGTGTTACTACCGAAAACGCAGAGATGGAGAAGGCCAAAAAGGAGCTGTT GGACACGGAGGTGAAGTTGTTCGAGGCGAGAGAAGAGGTGCGGCGTTTGA CGCAGGCGGTAGCACAATTGCATTTGGCAGGAGGAGGGGAAGGAAGAGCT GGGGGAGGGAGGGGAGGAGCAGGGGTGAAAGTGACGACGCATGCCCCTGC AGGAGGAGGGAGGGGTGGAGGGAGGATAGGTGGAAGAGGAGTGGGGGGAG GGAGGGGGGGAGGGTTGCGGATTGACAACCGGACGACGTGCCTGAAGTTG GTGAACAAACCGCAGGGTGTTGCTCCTGGTTCCCTGCAGAGCTATTTCAA TAACTTCGGGACTGTGGAACATGTAAAGGTTCTGGTGGAGGGGAAGGGAG GAGGGGAGGGAGGGGAGGAGTCGGCGGTCGTGAAATTTGTCACGAGAAGG GCGGCCGAGAATGCGAAGGCGAATGCCAAGTACTTGGGCTCACATGCGTT GGTGTTGCAATGGCATGATGCTTCAGCTGCTGCTGCTCCTCCTCCTTTAT CAACGACAATGAACGAAGCGACGACGGCTGTTGGTGTTGCTGCTCCCGTT GTTGAGGGAGAGGGGGGGGAAGGGGAGGTGGGAGAAGGAGCAGGGCAGGG AGGAGAGGAGGGGGAAGAGGGGGGAGTAAGTCTCTTGGAGCAGGAGGAGG ATTTGGATGCGCTTTTTTCTTAATAACGAGGAGAGGAAAGGAGGTCAAGA AGAAAAATGCGCTTTCTTTAGAGAAAAGGGTGGTAAGGAGAAGGAAGCCC TGGACTTGGAGCGAGTCCGGAGGGGGGGAGGGAGGGAAGGAGAGAGGGAA GACGCGGACTGCGACAGATAATGCCCAAAGAATATAAATAGAAAGAGATG ATAGGTGCAATGTTAAA
back to top

Coding sequence (CDS) from alignment at chr5:948342..952458-

>NO05G03600.1 ID=NO05G03600.1|Name=NO05G03600.1|organism=Nannochloropsis oceanica|type=CDS|length=3858bp|location=Sequence derived from alignment at chr5:948342..952458- (Nannochloropsis oceanica)
ATGAGCCTGCCCCAAGGGGAAGACCGGAAGAAGCTGCAAGCCTGGCTGCA
ACGGCAACTCCGACCCCTGAGCGAGACAAGCCCCGTCATACTCAGCAAAT
TCGTATTGCAACTTTTAGAGGCTGCAGACAAGGGGGAAGCGGAAAAAAAG
GCCGAGTGTTTGCGGGAGCTTGACTTGTATTTGACGCATGCCACGGCCAA
GTTTGTGGATCGTCTGTTCCATGCCCTCGAGACGGGGAGTTATCTGCACG
AACAGCAGCAGCAGCAGCAGGAGCAGTTACTCTATGATGGTGGTCTACAA
GAAGATGGCGAGCGCCAGTACAATCGACAGGGGGGAACTAACGACGACGT
CAGCCAGGGAAGCGGGAGAGGGAGTCGGGGGCTAGGAGGGTACGAGGACG
AGGAGGAGGAGGAAGAAAGAGGCCGAAATGGTCAATATGGCGAAGAGAAA
TATGAGGGTGATGGGTATCAGCAAGCGCACGGATCTGGCGTGGAGTCGGT
AGCTTTCGCGGAAGATCCTTATGCGCATTATGATCGAGAGGGGGATGAGG
GAGGGATGGAAGGAGGTGGTGGTAGAGGACGGAGGCGTGGAGGGAGCGAT
GCCTCAGCGTCTTCGGAGGATGACGACGAGGATGAGGACGAGAGTGAAGG
GCGGAGGGGTGGTCGTGGTGCCCGGAGAAGGCGACTGGAGCAACGGAGCA
GGAGCAGGAGTCCTGGTCAAAGAAATCCACCACCGCAGACTTATCCACCC
CCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCGACAGCAGCC
GTACCAGCAACAGAGACTACCGCAACAACAGCAGCAACAGCAGCAACAGC
AGTCACCCCACAGTGAGAGTCATTGTCGGGATTGGGATGGCGGACGGAAT
GTACGCTTTCCTTCACGGCAGCAGCCGCCGCAGCAGCACCAATACCCTCA
GCAGGGACCATGGCAAGGAGTGCAAGGCGGCGGTCCTCTTGGTGGTCCTA
TAGGAGGAGGAAGAGGAATGATTGTGGGCGGGCCCAAAACACCACCACCA
CGAGGGTGGGATGGAGGAGGAGGAGTAAGGCGGGGTCCACCACCTCCTCC
TCACCACATGCAGATGCAAGGCTCCCCTCCTCCCCTCCCTCATTACAGCC
AACCTCGCCCTCCTCCTCTACCTCGTCACCATCATCCTAACGGCATGGGC
CGAGGTGGACCCCTCCTACCTCCCCACGCTCCCCCGCACCCACCCTCCGT
CTCCTCCTCCTCCACCTCCCGTCAACCCCCCATGAATGGTCATAATGGGA
GAGATTATCCTCCCCCTCCCTCCCACCCTGCTCCTCCTCCTCTTCCCTCT
TCTATGCCACGTCGCCACGGCCCTTCTCCTGATTACGGTGGCCGAGGGGC
TCCACCCCCTTCCCCCTCCTCTTCCGCCTTCGCGCCCTTGCCTCCCCACC
CTCCCCCCTACTACGACAATGGAAGCAGGGGGAGAGGAAGGGAGGGGGTA
ATGGGTGGAAGGGGGGGAGCGAATCCATTTGGTATGGCAGGACGAGGAGG
AGGAATGGGCGGAGGAAGAGATGGGGAGAGAGTTGTTCCTCCTCCCCCTC
GTCCTCCCCTCCCACCTGGCCCCCCTCCATCTCACAAGGGAACGAGTGGA
GGGAGGGAGGGAGGAGGAGAAGGGTGGGATAGGAAAAGGGATAGAAGCTG
GGAACGGGAGACGGAAAGGGGTCTTGCACCACCCCGAGGAGGAGGACGAG
GAGGAGGAGGAGGAGGACGAGGGCCGCCATCCTTGGGAGGACCGTACGAC
AGCCCCAACGGCGGCCCACTGCCACCACTCGCAGCAAGGGGAGGGGGGAT
GAAGGGAGGAAGAGGAGGGCAAATGAACGCCATACGTCCGGGTATACAGG
CCTCGCCCATGAACGGACCACCACCACAAGAATCGCCACTCCACCACCCA
CTAGGCAGGGAGGGAGGGAGGGAAGGAGGAGGGGGGCCAGATGGCCGCCG
GACAATTTTTTTGCTGAATGTTCCCCCCTTCCTAACACCCTCCCTTGTGG
GAGACCACTATTCTCGTTTCGGCCATATCGTCAAGATCGTTTTCGAGCCG
TTGCTTGGGGGGCCCAATAAGGGGAAAAACAAGGTGTATATTCAATATGC
GTCGCACAGAGAGGCAGAAGCGGCGCAGGTGGCAGTGGATGTACCGATGG
GGAGGACGGGCTTCCGGCCTATCATGGGGTATCACCACTCGAATCTGGTG
GAGGCAGGGAGGCAACAGCAGGAGAGGTGGGTGGACAGGATGGGCAGCAG
TGGAGGCGGTGAAGGAGGAGGGAGGGGAGGTGGAATAGAGGGGGCGAGGG
GGATGCGGGTAGTGGATAAGCTGGGGGGGATTGCGGGTGAGGTTGGTGGA
GGAGGAGGGGCTGGAGGGGACCGAGGACCACCGTTTCCTCCTTTCCCCTC
TTCCAGACCTTACACACAGGATCGAGGAGGAGGAGAAGGAGGAGGAGGAG
GAAAAGGAGGAGGGTACCCTCCTCCTCCCCGCGGGCCGCCGCCGCCTTCT
TCTTTCGCTGGAGGGGTTCCACAAATCAAGCGACCGCGTTATGATGCCCT
CTCTCACCACCACCACCACCACCACCAGCAGCAGCAGCAGCAGCGACTCC
CCACACAAGCACAGCTGCAGCAGCAGCCGCGCCCACCTCCGACGGGCCAC
CCGCAGCAGCCGCCACACCCGCAGCAGCCGCAGAGTCGGTCTCCGTTTCT
TCGTCCTCCTCCCAGGGGTGCACCCATCCCATTTGATTCGCGGCCTCCTG
CACAGCCACCCCGCCCCAAGCAGCCTCCTAGAGAACAAGCACCGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCTCCTCTTCCTCCCCGTC
GTCTAACCCTCCTCCTTCCCCTTCCATCGCTCTTTCCACATCCTCAACCA
CCGCAACATCCTCCTCCCTCCCTTCCTCATCGACCCACCCCTCCTCCGCC
GCCCTCACTCGTCAACGCCTTGAGCTGGCCAAGAAAAAGGAAGCCATGTA
CAGCACGCAAAAGTCCCTCCACGAAAAACTGGTGGCAGCTGCGGTTGCTA
CTGCTACTGCGGCAGCAGCAACAGCAAATCCTACTGGTGTTACTACCGAA
AACGCAGAGATGGAGAAGGCCAAAAAGGAGCTGTTGGACACGGAGGTGAA
GTTGTTCGAGGCGAGAGAAGAGGTGCGGCGTTTGACGCAGGCGGTAGCAC
AATTGCATTTGGCAGGAGGAGGGGAAGGAAGAGCTGGGGGAGGGAGGGGA
GGAGCAGGGGTGAAAGTGACGACGCATGCCCCTGCAGGAGGAGGGAGGGG
TGGAGGGAGGATAGGTGGAAGAGGAGTGGGGGGAGGGAGGGGGGGAGGGT
TGCGGATTGACAACCGGACGACGTGCCTGAAGTTGGTGAACAAACCGCAG
GGTGTTGCTCCTGGTTCCCTGCAGAGCTATTTCAATAACTTCGGGACTGT
GGAACATGTAAAGGTTCTGGTGGAGGGGAAGGGAGGAGGGGAGGGAGGGG
AGGAGTCGGCGGTCGTGAAATTTGTCACGAGAAGGGCGGCCGAGAATGCG
AAGGCGAATGCCAAGTACTTGGGCTCACATGCGTTGGTGTTGCAATGGCA
TGATGCTTCAGCTGCTGCTGCTCCTCCTCCTTTATCAACGACAATGAACG
AAGCGACGACGGCTGTTGGTGTTGCTGCTCCCGTTGTTGAGGGAGAGGGG
GGGGAAGGGGAGGTGGGAGAAGGAGCAGGGCAGGGAGGAGAGGAGGGGGA
AGAGGGGGGAGTAAGTCTCTTGGAGCAGGAGGAGGATTTGGATGCGCTTT
TTTCTTAA
back to top
Synonyms
Publications