NO05G02490.1, NO05G02490.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G02490.1
Unique NameNO05G02490.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2106
Alignment locationchr5:662183..664288 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:662183..664288 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G02490.1 vs.
Match: EWM28127.1 (Protein kinase, catalytic domain protein [Nannochloropsis gaditana])

HSP 1 Score: 689.9 bits (1779), Expect = 8.300e-195
Identity = 358/462 (77.49%), Postives = 398/462 (86.15%), Query Frame = 0
Query:  226 DNDDEDGEEDEGPIDVCVHNKPLTEGEQHEMDEGHIDTVRGGQVEAPEKEEFLLDMFSLSPGKAALGAGGVLLAGGAGGGKGRIALASAGAAARGGKDAADTLEDNWDDHEGYYKTLVGEVIADRYLVLGSIGRGVFSTVLRCRDLKP----GEGG---PAVVAVKIIRNNDVMRKAAQRELDVLKALAAADPENRKHCVRLVTHLEHRQHVVMVFESLQMNLRETLRKFGKHVGLNIAAVRTYAKQLLIALRHIGHQGIVHADIKPDNILVSEGFGQLKLCDFGSSFREEAGDNDPTPYLVSRFYRAPEVVLGFEYGRGVDLWSVGCCLYELFTGRVAFPGSTNNEMLRLMMEVKGGLTQKVVRRHRAAYETLKLEPMFEPDGRFRQQEMDPVTKMPVLRIVHVPPQPTRDLTGVLLKAKAASDDKALVLNLGDLLEKIFVLDSSKRITVRDALHHPFFMS 681
            + ++E  EE+EGP++V VH+KPLTE E+ E D      +R GQ E  E++ FLLDMFSLSPG AAL A G+L     G G GR+ALASAGAAARGGKDA DTLEDNWDDHEGYYKTLVGEVI DRYLVLGSIGRGVFSTVLRC+D +     GE G   P+VVAVK+IRNNDVMRKAAQREL++L+ +AAADPEN+KHCVRL+ HLEHRQHVVMVFESL+MNLRETLRKFGKHVGLNI+AVRTYAKQLL ALRHI   GIVHADIKPDNILVSEGFGQLKLCDFGS+FRE+A DN PTPYLVSRFYRAPEV+LGFEYGRGVDLWSVGCCLYELFTGRV  PGS+NNEMLRL+ME+KG L QK+VRRHR AYE LKLEPMFE DGRFRQ E DPV+K  +LR+VHVP QPTRDLTG+LLKAKAASDDKALVL L DLLEKIF +D++KRI+VRDALHHPFF S
Sbjct:    4 EEEEEGEEEEEGPVEVRVHSKPLTE-EEAEQDMA----MRAGQPEPSEEKAFLLDMFSLSPGDAALAADGLLGGKARGPGTGRMALASAGAAARGGKDAVDTLEDNWDDHEGYYKTLVGEVIGDRYLVLGSIGRGVFSTVLRCQDQRALQEGGEAGKKAPSVVAVKVIRNNDVMRKAAQRELELLRVIAAADPENKKHCVRLLAHLEHRQHVVMVFESLEMNLRETLRKFGKHVGLNISAVRTYAKQLLFALRHIEKLGIVHADIKPDNILVSEGFGQLKLCDFGSAFREDAPDNAPTPYLVSRFYRAPEVILGFEYGRGVDLWSVGCCLYELFTGRVTLPGSSNNEMLRLIMELKGALPQKLVRRHRLAYEQLKLEPMFESDGRFRQIEQDPVSKKVLLRLVHVPLQPTRDLTGLLLKAKAASDDKALVLRLADLLEKIFSVDATKRISVRDALHHPFFSS 460          
The following BLAST results are available for this feature:
BLAST of NO05G02490.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28127.18.300e-19577.49Protein kinase, catalytic domain protein [Nannochl... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02490NO05G02490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G02490.1NO05G02490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G02490.1.cds1NO05G02490.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G02490.1 ID=NO05G02490.1|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=mRNA|length=2106bp
ATGGAGAGAGAAAGAGGGGGAAGCAGTCGTGGTTATCATCCTGAGCTTCA
TCACTCTTCGCACCACCATCGTCATCCTCAGCACAAAGAGAGCAAAGGAG
GTAGAGAGGAACATCGATGGCCTGTAGACGTTGGGGCACCTGATGTGAAT
GTGGACTGGGATCGGGAGAGAAGAAGGGAGAAGGAAAAGAGGAATGAGAA
GCGGCACCATTTGGAGAGAGAAGATGGAAAGGGCAGGAAGGAGAAAGAAG
ATGGAAAGGACAGGAAGGGAGGCGGTGGTGGAGTTGGGAGTAAGCGTGTG
AAGGGTCATAGCGAGTGGAACGGCAGCAGCCAAAAATTGAGGCGAAGCAG
TGGAAGCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTCCTTTGA
ATTTGGACGAAGAGAGCATGCGTTTGATGATGATGGCGAGTGGTGGCTTG
GGGGTGGAAGACGAGAAAAATGAGGAGGAAAGATTGCTGGCGGAGCGGAA
ACGGAAGCGGGAAGACATCGAGGCCTTGTACCGGAACAAGGAAGGGGGAG
AAGGCGGGAGGAAAGGCGGGCGGGATGACCAGAAGAGTAACGGCGGCAGT
GGACCAGCGGAGGAGGACCCGCCTGCGTCGCCGGTAATGCGCCAAGGAGG
GCCCAGTGGGATTGCTCTTACTCCGGATAACGACGACGAGGACGGCGAAG
AGGACGAAGGCCCAATTGACGTGTGCGTGCACAACAAGCCCTTGACGGAA
GGGGAGCAACATGAGATGGATGAAGGACATATTGACACGGTCCGTGGGGG
GCAGGTAGAGGCGCCGGAAAAGGAAGAGTTTTTGCTTGACATGTTTTCTC
TTTCTCCGGGCAAAGCCGCGCTGGGGGCAGGCGGGGTGTTACTGGCTGGT
GGGGCTGGGGGTGGGAAGGGGAGGATAGCTTTGGCGTCGGCAGGGGCGGC
GGCAAGGGGGGGAAAGGATGCAGCAGACACGTTGGAGGATAATTGGGACG
ATCACGAGGGGTATTACAAGACTTTGGTCGGCGAGGTGATAGCCGATAGG
TACCTTGTCCTAGGATCGATTGGAAGGGGGGTGTTCAGCACTGTGCTACG
GTGTCGGGATTTGAAACCAGGGGAGGGGGGGCCGGCGGTGGTGGCGGTAA
AGATTATTAGGAACAATGACGTGATGCGGAAGGCGGCGCAGAGGGAATTG
GACGTATTGAAGGCATTAGCGGCCGCTGATCCGGAGAATAGGAAGCATTG
CGTGCGGCTTGTAACCCATCTCGAGCATCGACAGCATGTAGTGATGGTAT
TTGAAAGTCTGCAAATGAATTTAAGAGAGACTCTTCGAAAATTCGGAAAG
CATGTTGGGTTGAATATAGCGGCGGTACGGACCTATGCCAAGCAGTTGTT
GATTGCCCTGAGGCATATTGGGCATCAGGGTATCGTGCACGCGGACATCA
AGCCTGACAACATATTGGTGTCCGAGGGGTTTGGACAGTTGAAGTTGTGT
GATTTTGGGAGTTCCTTCCGGGAAGAGGCCGGGGACAATGACCCGACACC
GTATTTGGTGAGTCGCTTTTATCGCGCGCCCGAGGTTGTGTTGGGGTTTG
AGTATGGCCGAGGGGTAGATTTGTGGAGTGTCGGCTGTTGCTTGTACGAG
CTGTTTACGGGACGGGTGGCCTTCCCTGGGAGCACCAATAATGAAATGCT
CAGGTTGATGATGGAGGTGAAGGGAGGCTTGACGCAGAAGGTGGTGAGGA
GGCATCGGGCCGCGTACGAGACGTTAAAGTTGGAGCCCATGTTCGAGCCG
GACGGACGTTTCAGACAGCAGGAGATGGACCCGGTAACTAAGATGCCTGT
GTTGCGAATTGTACATGTGCCGCCGCAGCCGACAAGAGATTTGACGGGGG
TTTTGCTCAAGGCCAAGGCGGCTTCAGATGATAAAGCGCTGGTCCTCAAT
TTGGGCGACTTGTTGGAGAAGATCTTTGTGCTGGATAGCAGCAAACGAAT
TACAGTACGGGATGCGTTGCACCACCCTTTTTTTATGTCATCTTCCTCGT
CGTCATCATCGTCGTCGAGTGGGCGTGCTAATGGTGGTGGTGCTAGGAAT
AAGTAA
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protein sequence of NO05G02490.1

>NO05G02490.1-protein ID=NO05G02490.1-protein|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp
MERERGGSSRGYHPELHHSSHHHRHPQHKESKGGREEHRWPVDVGAPDVN
VDWDRERRREKEKRNEKRHHLEREDGKGRKEKEDGKDRKGGGGGVGSKRV
KGHSEWNGSSQKLRRSSGSKKEEEEEEEEEVPLNLDEESMRLMMMASGGL
GVEDEKNEEERLLAERKRKREDIEALYRNKEGGEGGRKGGRDDQKSNGGS
GPAEEDPPASPVMRQGGPSGIALTPDNDDEDGEEDEGPIDVCVHNKPLTE
GEQHEMDEGHIDTVRGGQVEAPEKEEFLLDMFSLSPGKAALGAGGVLLAG
GAGGGKGRIALASAGAAARGGKDAADTLEDNWDDHEGYYKTLVGEVIADR
YLVLGSIGRGVFSTVLRCRDLKPGEGGPAVVAVKIIRNNDVMRKAAQREL
DVLKALAAADPENRKHCVRLVTHLEHRQHVVMVFESLQMNLRETLRKFGK
HVGLNIAAVRTYAKQLLIALRHIGHQGIVHADIKPDNILVSEGFGQLKLC
DFGSSFREEAGDNDPTPYLVSRFYRAPEVVLGFEYGRGVDLWSVGCCLYE
LFTGRVAFPGSTNNEMLRLMMEVKGGLTQKVVRRHRAAYETLKLEPMFEP
DGRFRQQEMDPVTKMPVLRIVHVPPQPTRDLTGVLLKAKAASDDKALVLN
LGDLLEKIFVLDSSKRITVRDALHHPFFMSSSSSSSSSSSGRANGGGARN
K*
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mRNA from alignment at chr5:662183..664288-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G02490.1 ID=NO05G02490.1|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=mRNA|length=2106bp|location=Sequence derived from alignment at chr5:662183..664288- (Nannochloropsis oceanica)
ATGGAGAGAGAAAGAGGGGGAAGCAGTCGTGGTTATCATCCTGAGCTTCA TCACTCTTCGCACCACCATCGTCATCCTCAGCACAAAGAGAGCAAAGGAG GTAGAGAGGAACATCGATGGCCTGTAGACGTTGGGGCACCTGATGTGAAT GTGGACTGGGATCGGGAGAGAAGAAGGGAGAAGGAAAAGAGGAATGAGAA GCGGCACCATTTGGAGAGAGAAGATGGAAAGGGCAGGAAGGAGAAAGAAG ATGGAAAGGACAGGAAGGGAGGCGGTGGTGGAGTTGGGAGTAAGCGTGTG AAGGGTCATAGCGAGTGGAACGGCAGCAGCCAAAAATTGAGGCGAAGCAG TGGAAGCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTCCTTTGA ATTTGGACGAAGAGAGCATGCGTTTGATGATGATGGCGAGTGGTGGCTTG GGGGTGGAAGACGAGAAAAATGAGGAGGAAAGATTGCTGGCGGAGCGGAA ACGGAAGCGGGAAGACATCGAGGCCTTGTACCGGAACAAGGAAGGGGGAG AAGGCGGGAGGAAAGGCGGGCGGGATGACCAGAAGAGTAACGGCGGCAGT GGACCAGCGGAGGAGGACCCGCCTGCGTCGCCGGTAATGCGCCAAGGAGG GCCCAGTGGGATTGCTCTTACTCCGGATAACGACGACGAGGACGGCGAAG AGGACGAAGGCCCAATTGACGTGTGCGTGCACAACAAGCCCTTGACGGAA GGGGAGCAACATGAGATGGATGAAGGACATATTGACACGGTCCGTGGGGG GCAGGTAGAGGCGCCGGAAAAGGAAGAGTTTTTGCTTGACATGTTTTCTC TTTCTCCGGGCAAAGCCGCGCTGGGGGCAGGCGGGGTGTTACTGGCTGGT GGGGCTGGGGGTGGGAAGGGGAGGATAGCTTTGGCGTCGGCAGGGGCGGC GGCAAGGGGGGGAAAGGATGCAGCAGACACGTTGGAGGATAATTGGGACG ATCACGAGGGGTATTACAAGACTTTGGTCGGCGAGGTGATAGCCGATAGG TACCTTGTCCTAGGATCGATTGGAAGGGGGGTGTTCAGCACTGTGCTACG GTGTCGGGATTTGAAACCAGGGGAGGGGGGGCCGGCGGTGGTGGCGGTAA AGATTATTAGGAACAATGACGTGATGCGGAAGGCGGCGCAGAGGGAATTG GACGTATTGAAGGCATTAGCGGCCGCTGATCCGGAGAATAGGAAGCATTG CGTGCGGCTTGTAACCCATCTCGAGCATCGACAGCATGTAGTGATGGTAT TTGAAAGTCTGCAAATGAATTTAAGAGAGACTCTTCGAAAATTCGGAAAG CATGTTGGGTTGAATATAGCGGCGGTACGGACCTATGCCAAGCAGTTGTT GATTGCCCTGAGGCATATTGGGCATCAGGGTATCGTGCACGCGGACATCA AGCCTGACAACATATTGGTGTCCGAGGGGTTTGGACAGTTGAAGTTGTGT GATTTTGGGAGTTCCTTCCGGGAAGAGGCCGGGGACAATGACCCGACACC GTATTTGGTGAGTCGCTTTTATCGCGCGCCCGAGGTTGTGTTGGGGTTTG AGTATGGCCGAGGGGTAGATTTGTGGAGTGTCGGCTGTTGCTTGTACGAG CTGTTTACGGGACGGGTGGCCTTCCCTGGGAGCACCAATAATGAAATGCT CAGGTTGATGATGGAGGTGAAGGGAGGCTTGACGCAGAAGGTGGTGAGGA GGCATCGGGCCGCGTACGAGACGTTAAAGTTGGAGCCCATGTTCGAGCCG GACGGACGTTTCAGACAGCAGGAGATGGACCCGGTAACTAAGATGCCTGT GTTGCGAATTGTACATGTGCCGCCGCAGCCGACAAGAGATTTGACGGGGG TTTTGCTCAAGGCCAAGGCGGCTTCAGATGATAAAGCGCTGGTCCTCAAT TTGGGCGACTTGTTGGAGAAGATCTTTGTGCTGGATAGCAGCAAACGAAT TACAGTACGGGATGCGTTGCACCACCCTTTTTTTATGTCATCTTCCTCGT CGTCATCATCGTCGTCGAGTGGGCGTGCTAATGGTGGTGGTGCTAGGAAT AAGTAA
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Coding sequence (CDS) from alignment at chr5:662183..664288-

>NO05G02490.1 ID=NO05G02490.1|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=CDS|length=2106bp|location=Sequence derived from alignment at chr5:662183..664288- (Nannochloropsis oceanica)
ATGGAGAGAGAAAGAGGGGGAAGCAGTCGTGGTTATCATCCTGAGCTTCA
TCACTCTTCGCACCACCATCGTCATCCTCAGCACAAAGAGAGCAAAGGAG
GTAGAGAGGAACATCGATGGCCTGTAGACGTTGGGGCACCTGATGTGAAT
GTGGACTGGGATCGGGAGAGAAGAAGGGAGAAGGAAAAGAGGAATGAGAA
GCGGCACCATTTGGAGAGAGAAGATGGAAAGGGCAGGAAGGAGAAAGAAG
ATGGAAAGGACAGGAAGGGAGGCGGTGGTGGAGTTGGGAGTAAGCGTGTG
AAGGGTCATAGCGAGTGGAACGGCAGCAGCCAAAAATTGAGGCGAAGCAG
TGGAAGCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTCCTTTGA
ATTTGGACGAAGAGAGCATGCGTTTGATGATGATGGCGAGTGGTGGCTTG
GGGGTGGAAGACGAGAAAAATGAGGAGGAAAGATTGCTGGCGGAGCGGAA
ACGGAAGCGGGAAGACATCGAGGCCTTGTACCGGAACAAGGAAGGGGGAG
AAGGCGGGAGGAAAGGCGGGCGGGATGACCAGAAGAGTAACGGCGGCAGT
GGACCAGCGGAGGAGGACCCGCCTGCGTCGCCGGTAATGCGCCAAGGAGG
GCCCAGTGGGATTGCTCTTACTCCGGATAACGACGACGAGGACGGCGAAG
AGGACGAAGGCCCAATTGACGTGTGCGTGCACAACAAGCCCTTGACGGAA
GGGGAGCAACATGAGATGGATGAAGGACATATTGACACGGTCCGTGGGGG
GCAGGTAGAGGCGCCGGAAAAGGAAGAGTTTTTGCTTGACATGTTTTCTC
TTTCTCCGGGCAAAGCCGCGCTGGGGGCAGGCGGGGTGTTACTGGCTGGT
GGGGCTGGGGGTGGGAAGGGGAGGATAGCTTTGGCGTCGGCAGGGGCGGC
GGCAAGGGGGGGAAAGGATGCAGCAGACACGTTGGAGGATAATTGGGACG
ATCACGAGGGGTATTACAAGACTTTGGTCGGCGAGGTGATAGCCGATAGG
TACCTTGTCCTAGGATCGATTGGAAGGGGGGTGTTCAGCACTGTGCTACG
GTGTCGGGATTTGAAACCAGGGGAGGGGGGGCCGGCGGTGGTGGCGGTAA
AGATTATTAGGAACAATGACGTGATGCGGAAGGCGGCGCAGAGGGAATTG
GACGTATTGAAGGCATTAGCGGCCGCTGATCCGGAGAATAGGAAGCATTG
CGTGCGGCTTGTAACCCATCTCGAGCATCGACAGCATGTAGTGATGGTAT
TTGAAAGTCTGCAAATGAATTTAAGAGAGACTCTTCGAAAATTCGGAAAG
CATGTTGGGTTGAATATAGCGGCGGTACGGACCTATGCCAAGCAGTTGTT
GATTGCCCTGAGGCATATTGGGCATCAGGGTATCGTGCACGCGGACATCA
AGCCTGACAACATATTGGTGTCCGAGGGGTTTGGACAGTTGAAGTTGTGT
GATTTTGGGAGTTCCTTCCGGGAAGAGGCCGGGGACAATGACCCGACACC
GTATTTGGTGAGTCGCTTTTATCGCGCGCCCGAGGTTGTGTTGGGGTTTG
AGTATGGCCGAGGGGTAGATTTGTGGAGTGTCGGCTGTTGCTTGTACGAG
CTGTTTACGGGACGGGTGGCCTTCCCTGGGAGCACCAATAATGAAATGCT
CAGGTTGATGATGGAGGTGAAGGGAGGCTTGACGCAGAAGGTGGTGAGGA
GGCATCGGGCCGCGTACGAGACGTTAAAGTTGGAGCCCATGTTCGAGCCG
GACGGACGTTTCAGACAGCAGGAGATGGACCCGGTAACTAAGATGCCTGT
GTTGCGAATTGTACATGTGCCGCCGCAGCCGACAAGAGATTTGACGGGGG
TTTTGCTCAAGGCCAAGGCGGCTTCAGATGATAAAGCGCTGGTCCTCAAT
TTGGGCGACTTGTTGGAGAAGATCTTTGTGCTGGATAGCAGCAAACGAAT
TACAGTACGGGATGCGTTGCACCACCCTTTTTTTATGTCATCTTCCTCGT
CGTCATCATCGTCGTCGAGTGGGCGTGCTAATGGTGGTGGTGCTAGGAAT
AAGTAA
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Synonyms
Publications