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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr5 | genome | chr5:662183..664288 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G02490.1 vs.
Match: EWM28127.1 (Protein kinase, catalytic domain protein [Nannochloropsis gaditana]) HSP 1 Score: 689.9 bits (1779), Expect = 8.300e-195 Identity = 358/462 (77.49%), Postives = 398/462 (86.15%), Query Frame = 0
Query: 226 DNDDEDGEEDEGPIDVCVHNKPLTEGEQHEMDEGHIDTVRGGQVEAPEKEEFLLDMFSLSPGKAALGAGGVLLAGGAGGGKGRIALASAGAAARGGKDAADTLEDNWDDHEGYYKTLVGEVIADRYLVLGSIGRGVFSTVLRCRDLKP----GEGG---PAVVAVKIIRNNDVMRKAAQRELDVLKALAAADPENRKHCVRLVTHLEHRQHVVMVFESLQMNLRETLRKFGKHVGLNIAAVRTYAKQLLIALRHIGHQGIVHADIKPDNILVSEGFGQLKLCDFGSSFREEAGDNDPTPYLVSRFYRAPEVVLGFEYGRGVDLWSVGCCLYELFTGRVAFPGSTNNEMLRLMMEVKGGLTQKVVRRHRAAYETLKLEPMFEPDGRFRQQEMDPVTKMPVLRIVHVPPQPTRDLTGVLLKAKAASDDKALVLNLGDLLEKIFVLDSSKRITVRDALHHPFFMS 681
+ ++E EE+EGP++V VH+KPLTE E+ E D +R GQ E E++ FLLDMFSLSPG AAL A G+L G G GR+ALASAGAAARGGKDA DTLEDNWDDHEGYYKTLVGEVI DRYLVLGSIGRGVFSTVLRC+D + GE G P+VVAVK+IRNNDVMRKAAQREL++L+ +AAADPEN+KHCVRL+ HLEHRQHVVMVFESL+MNLRETLRKFGKHVGLNI+AVRTYAKQLL ALRHI GIVHADIKPDNILVSEGFGQLKLCDFGS+FRE+A DN PTPYLVSRFYRAPEV+LGFEYGRGVDLWSVGCCLYELFTGRV PGS+NNEMLRL+ME+KG L QK+VRRHR AYE LKLEPMFE DGRFRQ E DPV+K +LR+VHVP QPTRDLTG+LLKAKAASDDKALVL L DLLEKIF +D++KRI+VRDALHHPFF S
Sbjct: 4 EEEEEGEEEEEGPVEVRVHSKPLTE-EEAEQDMA----MRAGQPEPSEEKAFLLDMFSLSPGDAALAADGLLGGKARGPGTGRMALASAGAAARGGKDAVDTLEDNWDDHEGYYKTLVGEVIGDRYLVLGSIGRGVFSTVLRCQDQRALQEGGEAGKKAPSVVAVKVIRNNDVMRKAAQRELELLRVIAAADPENKKHCVRLLAHLEHRQHVVMVFESLEMNLRETLRKFGKHVGLNISAVRTYAKQLLFALRHIEKLGIVHADIKPDNILVSEGFGQLKLCDFGSAFREDAPDNAPTPYLVSRFYRAPEVILGFEYGRGVDLWSVGCCLYELFTGRVTLPGSSNNEMLRLIMELKGALPQKLVRRHRLAYEQLKLEPMFESDGRFRQIEQDPVSKKVLLRLVHVPLQPTRDLTGLLLKAKAASDDKALVLRLADLLEKIFSVDATKRISVRDALHHPFFSS 460
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G02490.1 ID=NO05G02490.1|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=mRNA|length=2106bp ATGGAGAGAGAAAGAGGGGGAAGCAGTCGTGGTTATCATCCTGAGCTTCA TCACTCTTCGCACCACCATCGTCATCCTCAGCACAAAGAGAGCAAAGGAG GTAGAGAGGAACATCGATGGCCTGTAGACGTTGGGGCACCTGATGTGAAT GTGGACTGGGATCGGGAGAGAAGAAGGGAGAAGGAAAAGAGGAATGAGAA GCGGCACCATTTGGAGAGAGAAGATGGAAAGGGCAGGAAGGAGAAAGAAG ATGGAAAGGACAGGAAGGGAGGCGGTGGTGGAGTTGGGAGTAAGCGTGTG AAGGGTCATAGCGAGTGGAACGGCAGCAGCCAAAAATTGAGGCGAAGCAG TGGAAGCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTCCTTTGA ATTTGGACGAAGAGAGCATGCGTTTGATGATGATGGCGAGTGGTGGCTTG GGGGTGGAAGACGAGAAAAATGAGGAGGAAAGATTGCTGGCGGAGCGGAA ACGGAAGCGGGAAGACATCGAGGCCTTGTACCGGAACAAGGAAGGGGGAG AAGGCGGGAGGAAAGGCGGGCGGGATGACCAGAAGAGTAACGGCGGCAGT GGACCAGCGGAGGAGGACCCGCCTGCGTCGCCGGTAATGCGCCAAGGAGG GCCCAGTGGGATTGCTCTTACTCCGGATAACGACGACGAGGACGGCGAAG AGGACGAAGGCCCAATTGACGTGTGCGTGCACAACAAGCCCTTGACGGAA GGGGAGCAACATGAGATGGATGAAGGACATATTGACACGGTCCGTGGGGG GCAGGTAGAGGCGCCGGAAAAGGAAGAGTTTTTGCTTGACATGTTTTCTC TTTCTCCGGGCAAAGCCGCGCTGGGGGCAGGCGGGGTGTTACTGGCTGGT GGGGCTGGGGGTGGGAAGGGGAGGATAGCTTTGGCGTCGGCAGGGGCGGC GGCAAGGGGGGGAAAGGATGCAGCAGACACGTTGGAGGATAATTGGGACG ATCACGAGGGGTATTACAAGACTTTGGTCGGCGAGGTGATAGCCGATAGG TACCTTGTCCTAGGATCGATTGGAAGGGGGGTGTTCAGCACTGTGCTACG GTGTCGGGATTTGAAACCAGGGGAGGGGGGGCCGGCGGTGGTGGCGGTAA AGATTATTAGGAACAATGACGTGATGCGGAAGGCGGCGCAGAGGGAATTG GACGTATTGAAGGCATTAGCGGCCGCTGATCCGGAGAATAGGAAGCATTG CGTGCGGCTTGTAACCCATCTCGAGCATCGACAGCATGTAGTGATGGTAT TTGAAAGTCTGCAAATGAATTTAAGAGAGACTCTTCGAAAATTCGGAAAG CATGTTGGGTTGAATATAGCGGCGGTACGGACCTATGCCAAGCAGTTGTT GATTGCCCTGAGGCATATTGGGCATCAGGGTATCGTGCACGCGGACATCA AGCCTGACAACATATTGGTGTCCGAGGGGTTTGGACAGTTGAAGTTGTGT GATTTTGGGAGTTCCTTCCGGGAAGAGGCCGGGGACAATGACCCGACACC GTATTTGGTGAGTCGCTTTTATCGCGCGCCCGAGGTTGTGTTGGGGTTTG AGTATGGCCGAGGGGTAGATTTGTGGAGTGTCGGCTGTTGCTTGTACGAG CTGTTTACGGGACGGGTGGCCTTCCCTGGGAGCACCAATAATGAAATGCT CAGGTTGATGATGGAGGTGAAGGGAGGCTTGACGCAGAAGGTGGTGAGGA GGCATCGGGCCGCGTACGAGACGTTAAAGTTGGAGCCCATGTTCGAGCCG GACGGACGTTTCAGACAGCAGGAGATGGACCCGGTAACTAAGATGCCTGT GTTGCGAATTGTACATGTGCCGCCGCAGCCGACAAGAGATTTGACGGGGG TTTTGCTCAAGGCCAAGGCGGCTTCAGATGATAAAGCGCTGGTCCTCAAT TTGGGCGACTTGTTGGAGAAGATCTTTGTGCTGGATAGCAGCAAACGAAT TACAGTACGGGATGCGTTGCACCACCCTTTTTTTATGTCATCTTCCTCGT CGTCATCATCGTCGTCGAGTGGGCGTGCTAATGGTGGTGGTGCTAGGAAT AAGTAA back to topprotein sequence of NO05G02490.1 >NO05G02490.1-protein ID=NO05G02490.1-protein|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp MERERGGSSRGYHPELHHSSHHHRHPQHKESKGGREEHRWPVDVGAPDVN VDWDRERRREKEKRNEKRHHLEREDGKGRKEKEDGKDRKGGGGGVGSKRV KGHSEWNGSSQKLRRSSGSKKEEEEEEEEEVPLNLDEESMRLMMMASGGL GVEDEKNEEERLLAERKRKREDIEALYRNKEGGEGGRKGGRDDQKSNGGS GPAEEDPPASPVMRQGGPSGIALTPDNDDEDGEEDEGPIDVCVHNKPLTE GEQHEMDEGHIDTVRGGQVEAPEKEEFLLDMFSLSPGKAALGAGGVLLAG GAGGGKGRIALASAGAAARGGKDAADTLEDNWDDHEGYYKTLVGEVIADR YLVLGSIGRGVFSTVLRCRDLKPGEGGPAVVAVKIIRNNDVMRKAAQREL DVLKALAAADPENRKHCVRLVTHLEHRQHVVMVFESLQMNLRETLRKFGK HVGLNIAAVRTYAKQLLIALRHIGHQGIVHADIKPDNILVSEGFGQLKLC DFGSSFREEAGDNDPTPYLVSRFYRAPEVVLGFEYGRGVDLWSVGCCLYE LFTGRVAFPGSTNNEMLRLMMEVKGGLTQKVVRRHRAAYETLKLEPMFEP DGRFRQQEMDPVTKMPVLRIVHVPPQPTRDLTGVLLKAKAASDDKALVLN LGDLLEKIFVLDSSKRITVRDALHHPFFMSSSSSSSSSSSGRANGGGARN K* back to topmRNA from alignment at chr5:662183..664288- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G02490.1 ID=NO05G02490.1|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=mRNA|length=2106bp|location=Sequence derived from alignment at chr5:662183..664288- (Nannochloropsis oceanica) ATGGAGAGAGAAAGAGGGGGAAGCAGTCGTGGTTATCATCCTGAGCTTCA
TCACTCTTCGCACCACCATCGTCATCCTCAGCACAAAGAGAGCAAAGGAG
GTAGAGAGGAACATCGATGGCCTGTAGACGTTGGGGCACCTGATGTGAAT
GTGGACTGGGATCGGGAGAGAAGAAGGGAGAAGGAAAAGAGGAATGAGAA
GCGGCACCATTTGGAGAGAGAAGATGGAAAGGGCAGGAAGGAGAAAGAAG
ATGGAAAGGACAGGAAGGGAGGCGGTGGTGGAGTTGGGAGTAAGCGTGTG
AAGGGTCATAGCGAGTGGAACGGCAGCAGCCAAAAATTGAGGCGAAGCAG
TGGAAGCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTCCTTTGA
ATTTGGACGAAGAGAGCATGCGTTTGATGATGATGGCGAGTGGTGGCTTG
GGGGTGGAAGACGAGAAAAATGAGGAGGAAAGATTGCTGGCGGAGCGGAA
ACGGAAGCGGGAAGACATCGAGGCCTTGTACCGGAACAAGGAAGGGGGAG
AAGGCGGGAGGAAAGGCGGGCGGGATGACCAGAAGAGTAACGGCGGCAGT
GGACCAGCGGAGGAGGACCCGCCTGCGTCGCCGGTAATGCGCCAAGGAGG
GCCCAGTGGGATTGCTCTTACTCCGGATAACGACGACGAGGACGGCGAAG
AGGACGAAGGCCCAATTGACGTGTGCGTGCACAACAAGCCCTTGACGGAA
GGGGAGCAACATGAGATGGATGAAGGACATATTGACACGGTCCGTGGGGG
GCAGGTAGAGGCGCCGGAAAAGGAAGAGTTTTTGCTTGACATGTTTTCTC
TTTCTCCGGGCAAAGCCGCGCTGGGGGCAGGCGGGGTGTTACTGGCTGGT
GGGGCTGGGGGTGGGAAGGGGAGGATAGCTTTGGCGTCGGCAGGGGCGGC
GGCAAGGGGGGGAAAGGATGCAGCAGACACGTTGGAGGATAATTGGGACG
ATCACGAGGGGTATTACAAGACTTTGGTCGGCGAGGTGATAGCCGATAGG
TACCTTGTCCTAGGATCGATTGGAAGGGGGGTGTTCAGCACTGTGCTACG
GTGTCGGGATTTGAAACCAGGGGAGGGGGGGCCGGCGGTGGTGGCGGTAA
AGATTATTAGGAACAATGACGTGATGCGGAAGGCGGCGCAGAGGGAATTG
GACGTATTGAAGGCATTAGCGGCCGCTGATCCGGAGAATAGGAAGCATTG
CGTGCGGCTTGTAACCCATCTCGAGCATCGACAGCATGTAGTGATGGTAT
TTGAAAGTCTGCAAATGAATTTAAGAGAGACTCTTCGAAAATTCGGAAAG
CATGTTGGGTTGAATATAGCGGCGGTACGGACCTATGCCAAGCAGTTGTT
GATTGCCCTGAGGCATATTGGGCATCAGGGTATCGTGCACGCGGACATCA
AGCCTGACAACATATTGGTGTCCGAGGGGTTTGGACAGTTGAAGTTGTGT
GATTTTGGGAGTTCCTTCCGGGAAGAGGCCGGGGACAATGACCCGACACC
GTATTTGGTGAGTCGCTTTTATCGCGCGCCCGAGGTTGTGTTGGGGTTTG
AGTATGGCCGAGGGGTAGATTTGTGGAGTGTCGGCTGTTGCTTGTACGAG
CTGTTTACGGGACGGGTGGCCTTCCCTGGGAGCACCAATAATGAAATGCT
CAGGTTGATGATGGAGGTGAAGGGAGGCTTGACGCAGAAGGTGGTGAGGA
GGCATCGGGCCGCGTACGAGACGTTAAAGTTGGAGCCCATGTTCGAGCCG
GACGGACGTTTCAGACAGCAGGAGATGGACCCGGTAACTAAGATGCCTGT
GTTGCGAATTGTACATGTGCCGCCGCAGCCGACAAGAGATTTGACGGGGG
TTTTGCTCAAGGCCAAGGCGGCTTCAGATGATAAAGCGCTGGTCCTCAAT
TTGGGCGACTTGTTGGAGAAGATCTTTGTGCTGGATAGCAGCAAACGAAT
TACAGTACGGGATGCGTTGCACCACCCTTTTTTTATGTCATCTTCCTCGT
CGTCATCATCGTCGTCGAGTGGGCGTGCTAATGGTGGTGGTGCTAGGAAT
AAGTAA back to topCoding sequence (CDS) from alignment at chr5:662183..664288- >NO05G02490.1 ID=NO05G02490.1|Name=NO05G02490.1|organism=Nannochloropsis oceanica|type=CDS|length=2106bp|location=Sequence derived from alignment at chr5:662183..664288- (Nannochloropsis oceanica) ATGGAGAGAGAAAGAGGGGGAAGCAGTCGTGGTTATCATCCTGAGCTTCA TCACTCTTCGCACCACCATCGTCATCCTCAGCACAAAGAGAGCAAAGGAG GTAGAGAGGAACATCGATGGCCTGTAGACGTTGGGGCACCTGATGTGAAT GTGGACTGGGATCGGGAGAGAAGAAGGGAGAAGGAAAAGAGGAATGAGAA GCGGCACCATTTGGAGAGAGAAGATGGAAAGGGCAGGAAGGAGAAAGAAG ATGGAAAGGACAGGAAGGGAGGCGGTGGTGGAGTTGGGAGTAAGCGTGTG AAGGGTCATAGCGAGTGGAACGGCAGCAGCCAAAAATTGAGGCGAAGCAG TGGAAGCAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTCCTTTGA ATTTGGACGAAGAGAGCATGCGTTTGATGATGATGGCGAGTGGTGGCTTG GGGGTGGAAGACGAGAAAAATGAGGAGGAAAGATTGCTGGCGGAGCGGAA ACGGAAGCGGGAAGACATCGAGGCCTTGTACCGGAACAAGGAAGGGGGAG AAGGCGGGAGGAAAGGCGGGCGGGATGACCAGAAGAGTAACGGCGGCAGT GGACCAGCGGAGGAGGACCCGCCTGCGTCGCCGGTAATGCGCCAAGGAGG GCCCAGTGGGATTGCTCTTACTCCGGATAACGACGACGAGGACGGCGAAG AGGACGAAGGCCCAATTGACGTGTGCGTGCACAACAAGCCCTTGACGGAA GGGGAGCAACATGAGATGGATGAAGGACATATTGACACGGTCCGTGGGGG GCAGGTAGAGGCGCCGGAAAAGGAAGAGTTTTTGCTTGACATGTTTTCTC TTTCTCCGGGCAAAGCCGCGCTGGGGGCAGGCGGGGTGTTACTGGCTGGT GGGGCTGGGGGTGGGAAGGGGAGGATAGCTTTGGCGTCGGCAGGGGCGGC GGCAAGGGGGGGAAAGGATGCAGCAGACACGTTGGAGGATAATTGGGACG ATCACGAGGGGTATTACAAGACTTTGGTCGGCGAGGTGATAGCCGATAGG TACCTTGTCCTAGGATCGATTGGAAGGGGGGTGTTCAGCACTGTGCTACG GTGTCGGGATTTGAAACCAGGGGAGGGGGGGCCGGCGGTGGTGGCGGTAA AGATTATTAGGAACAATGACGTGATGCGGAAGGCGGCGCAGAGGGAATTG GACGTATTGAAGGCATTAGCGGCCGCTGATCCGGAGAATAGGAAGCATTG CGTGCGGCTTGTAACCCATCTCGAGCATCGACAGCATGTAGTGATGGTAT TTGAAAGTCTGCAAATGAATTTAAGAGAGACTCTTCGAAAATTCGGAAAG CATGTTGGGTTGAATATAGCGGCGGTACGGACCTATGCCAAGCAGTTGTT GATTGCCCTGAGGCATATTGGGCATCAGGGTATCGTGCACGCGGACATCA AGCCTGACAACATATTGGTGTCCGAGGGGTTTGGACAGTTGAAGTTGTGT GATTTTGGGAGTTCCTTCCGGGAAGAGGCCGGGGACAATGACCCGACACC GTATTTGGTGAGTCGCTTTTATCGCGCGCCCGAGGTTGTGTTGGGGTTTG AGTATGGCCGAGGGGTAGATTTGTGGAGTGTCGGCTGTTGCTTGTACGAG CTGTTTACGGGACGGGTGGCCTTCCCTGGGAGCACCAATAATGAAATGCT CAGGTTGATGATGGAGGTGAAGGGAGGCTTGACGCAGAAGGTGGTGAGGA GGCATCGGGCCGCGTACGAGACGTTAAAGTTGGAGCCCATGTTCGAGCCG GACGGACGTTTCAGACAGCAGGAGATGGACCCGGTAACTAAGATGCCTGT GTTGCGAATTGTACATGTGCCGCCGCAGCCGACAAGAGATTTGACGGGGG TTTTGCTCAAGGCCAAGGCGGCTTCAGATGATAAAGCGCTGGTCCTCAAT TTGGGCGACTTGTTGGAGAAGATCTTTGTGCTGGATAGCAGCAAACGAAT TACAGTACGGGATGCGTTGCACCACCCTTTTTTTATGTCATCTTCCTCGT CGTCATCATCGTCGTCGAGTGGGCGTGCTAATGGTGGTGGTGCTAGGAAT AAGTAA back to top
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