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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr5 | genome | chr5:543253..545692 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G02010.2 vs.
Match: EWM28217.1 (metal-dependent amidohydrolase 3 [Nannochloropsis gaditana]) HSP 1 Score: 611.3 bits (1575), Expect = 2.700e-171 Identity = 307/489 (62.78%), Postives = 371/489 (75.87%), Query Frame = 0
Query: 1 MLLLHNARLWQWDDDSAASSSSSSLSSSSGRLTQPEAGWCLIDTTKGIFDAVGCVAD--DDEEHAAYKAAQAKATRIIDMNMKCAEGSIILPGLIDAHIHVGYMGEAQEYLQLSGCRTLSELGAAVAAYGKMHPSKSWVVGVGWDQSAWGGDYPSRQDLDKAMGDDKRPVVLYRACWHIVVANTAALEVSGISLIPAKKPPAGIDIDAISGFPTGIFRENAVSSITDHIAEADDDVRETYFRNALNQCLRAGLTSVQTNDSNAWHLYRKLESQQKLPLRVFLTVNHDEFESNVNHSQPLHPSFASPSSLLSCERVKLYSDGSLGAETAALRSPYVGTTNTGMLIHTLEELREKIKSAHKAGFQLEVHAIGNRALETVLDALEGAEVPSGARPVITHCQVMGEDLMERMAWQGVVASIQPSFVSTDCKWVQARLPVEVQRVSYCWKSLGERGVMCAGGSDAPVEDCRPLGGIYDAMHRVPHAGKPRGGRK 488
MLLL NA WQWD D+ S GRL + GWCLID +G+FD V C + D++ +AY+ AQA+ATR+IDM KC EG+I+LPGLID+HIHVGYMGEA EYLQL G R+L +L AV YGK +P KSW++GVGWDQS WGG YP+RQ LD+AM +DKRP+VLYR CWHIVVANTAAL+ +GI L P + +G+D+DA SG PTGIFRE AV IT+HIAE ++ +RE Y RNALN CLRAGLT+VQTND AW++Y+ LE++ +LPLRVFLT+N++EFE QP + S L +C R+KLYSDGSLGAETAALRSPY G+TN G+LIH +E+L KI +H+AGFQLEVHAIG+RAL TVL+AL+ A + GARPVITHCQV+GEDL+ RMA QGVVASIQPSFV TDC+W+Q RLP V + SYCWKSL E GV CAGGSD+PVE C PL GIYDAMHR+ HA K +K
Sbjct: 28 MLLLKNACFWQWDPDTLPFS---------GRLAE---GWCLIDDVRGVFDTVFCEDNLCIDDQRSAYEQAQAQATRVIDM--KCNEGNILLPGLIDSHIHVGYMGEACEYLQLRGTRSLDDLSTAVRNYGKENPKKSWIIGVGWDQSGWGGCYPTRQVLDEAMREDKRPLVLYRECWHIVVANTAALQRAGIRLTPTNEHFSGVDLDA-SGVPTGIFRETAVLLITNHIAENNEKLREVYIRNALNNCLRAGLTAVQTNDIKAWNIYQNLEAKGELPLRVFLTINYEEFEEE--GKQPNFHTLNSKPPLFTCRRIKLYSDGSLGAETAALRSPYPGSTNRGLLIHNVEDLAAKICHSHEAGFQLEVHAIGDRALSTVLEALKRARIKPGARPVITHCQVLGEDLINRMAKQGVVASIQPSFVGTDCQWIQERLPSHVLKTSYCWKSLLENGVYCAGGSDSPVEGCEPLSGIYDAMHRLSHASKLTARKK 499
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G02010.2 ID=NO05G02010.2|Name=NO05G02010.2|organism=Nannochloropsis oceanica|type=mRNA|length=2199bp TGAAAAACATAGAGCCGTGTCAGACTATGGTTATGGTGCCATGGTTGGTG GGCTTTGTGATATAAGAGTGAAAAAATATAAGAGTGGAAGGTGAGAGGCG ATCGGGGAAATGCTAGATACGAGCACAGAGGAAACGACAACCTCCCCGCT CGCTCCTTCCCACTCTTACGTACACTGCCACATATCACACAACGCCCTAC ATCATACCAATCAGTGGAATCTACCCACGACATTGTCAGGGAGCGTATCA CCGACTTGATCCGTATGCTGCTCCTCCACAATGCTCGTCTGTGGCAATGG GACGACGACTCAGCCGCATCCTCGTCCTCGTCCTCTCTCTCGTCCTCATC AGGACGTCTTACCCAGCCCGAGGCAGGGTGGTGCCTCATCGACACGACAA AAGGCATATTCGATGCAGTGGGTTGTGTAGCAGACGACGACGAAGAGCAT GCGGCCTACAAGGCTGCGCAAGCCAAGGCGACCCGCATTATTGACATGAA CATGAAATGCGCCGAAGGCAGCATTATTCTACCGGGTCTAATCGACGCGC ACATTCACGTCGGTTACATGGGTGAGGCGCAAGAATACCTGCAACTTTCT GGCTGTCGCACCTTGTCAGAGCTGGGTGCGGCCGTGGCGGCCTACGGCAA GATGCATCCAAGCAAATCGTGGGTTGTGGGAGTAGGTTGGGACCAATCAG CCTGGGGTGGAGATTATCCCTCGCGGCAGGACTTGGACAAAGCCATGGGT GACGATAAGCGGCCTGTCGTATTGTACCGTGCATGTTGGCACATAGTCGT GGCCAATACGGCTGCTTTGGAAGTAAGTGGGATATCGCTGATTCCCGCGA AGAAGCCACCCGCTGGAATAGATATCGACGCCATTAGCGGCTTCCCTACG GGAATCTTTCGAGAGAATGCAGTCTCAAGCATCACAGACCACATCGCCGA AGCCGACGACGACGTTCGCGAGACCTACTTCCGGAACGCCCTCAACCAGT GCCTCCGCGCAGGCCTCACGTCGGTTCAAACAAATGACAGCAATGCCTGG CACCTTTACCGTAAGCTGGAATCTCAGCAGAAACTCCCCCTCCGCGTCTT TCTCACCGTCAACCACGACGAATTTGAGAGCAACGTTAACCACAGCCAGC CCCTCCATCCCTCCTTCGCCTCCCCCTCCTCTCTCCTCTCCTGCGAGCGT GTAAAACTCTACTCCGACGGAAGTCTCGGTGCAGAAACTGCAGCATTGCG TTCTCCCTACGTTGGTACTACCAACACCGGCATGCTTATCCATACACTCG AAGAACTCAGAGAAAAAATCAAGAGTGCGCACAAAGCAGGATTTCAGCTG GAGGTTCATGCGATAGGAAATCGAGCTTTAGAGACAGTGTTGGACGCGCT GGAAGGGGCAGAGGTGCCTTCGGGAGCTCGACCCGTGATAACTCATTGTC AAGTCATGGGGGAAGATCTGATGGAAAGGATGGCCTGGCAGGGGGTAGTT GCTTCGATCCAGCCGTCGTTTGTCTCGACGGATTGTAAGTGGGTCCAAGC CCGGCTGCCGGTTGAGGTGCAGCGTGTGTCGTATTGCTGGAAGAGTCTTG GGGAGCGAGGAGTGATGTGTGCAGGGGGATCGGATGCCCCAGTGGAGGAC TGTCGGCCTTTGGGAGGGATTTATGACGCGATGCACCGGGTGCCGCATGC GGGTAAGCCGAGGGGGGGAAGGAAGGATGGAGGGAGGAAAGGGAAGTGGC ATTTTTGCCGGAGGAGTGTTTGAGTTTCTCGGAAGCTTTAAGGCTGTACA CAATTGGTGGAGCGTATGCTTGTCATGCGGAGAGAAAGCTGGGTCGGATA GCACCGGGGTATCAGGCTGATTTTGTTGTGATTGATAGGGATGTGACTGG GCCGAGGAGGGAGGAGGACTGTCGGCACGCGTTGCTTGAGGCGGCCGTGG AGCAAGTGTGGGTTGGGGGTGTGTGTCGCCTTGATACAAAAGGGGAAAAC GAAAGAAAGGTGTTCGCATCGGCTGCAATTTTGGGGGGGCCCTTCATTCC GGGCAAAAATGGGCCGCTCCGAGGACAAGGACGAAAGCAACCGCAACAGC TGGAGGAGGAGGGCATGTGGGTACTGCAAAACAAACGGTTGGGTGCGGGC TGTTGTGGCCATTGAACATTTAAAATATAGTGTAGTATGTATTCAGTTG back to topprotein sequence of NO05G02010.2 >NO05G02010.2-protein ID=NO05G02010.2-protein|Name=NO05G02010.2|organism=Nannochloropsis oceanica|type=polypeptide|length=503bp MLLLHNARLWQWDDDSAASSSSSSLSSSSGRLTQPEAGWCLIDTTKGIFD AVGCVADDDEEHAAYKAAQAKATRIIDMNMKCAEGSIILPGLIDAHIHVG YMGEAQEYLQLSGCRTLSELGAAVAAYGKMHPSKSWVVGVGWDQSAWGGD YPSRQDLDKAMGDDKRPVVLYRACWHIVVANTAALEVSGISLIPAKKPPA GIDIDAISGFPTGIFRENAVSSITDHIAEADDDVRETYFRNALNQCLRAG LTSVQTNDSNAWHLYRKLESQQKLPLRVFLTVNHDEFESNVNHSQPLHPS FASPSSLLSCERVKLYSDGSLGAETAALRSPYVGTTNTGMLIHTLEELRE KIKSAHKAGFQLEVHAIGNRALETVLDALEGAEVPSGARPVITHCQVMGE DLMERMAWQGVVASIQPSFVSTDCKWVQARLPVEVQRVSYCWKSLGERGV MCAGGSDAPVEDCRPLGGIYDAMHRVPHAGKPRGGRKDGGRKGKWHFCRR SV* back to topmRNA from alignment at chr5:543253..545692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G02010.2 ID=NO05G02010.2|Name=NO05G02010.2|organism=Nannochloropsis oceanica|type=mRNA|length=2440bp|location=Sequence derived from alignment at chr5:543253..545692- (Nannochloropsis oceanica) TGAAAAACATAGAGCCGTGTCAGACTATGGTTATGGTGCCATGGTTGGTG
GGCTTTGTGATATAAGAGTGAAAAAATATAAGAGTGGAAGGTGAGAGGCG
ATCGGGGAAATGCTAGATACGAGCACAGAGGAAACGACAACCTCCCCGCT
CGCTCCTTCCCACTCTTACGTACACTGCCACATATCACACAACGCCCTAC
ATCATACCAATCAGTGGAATCTACCCACGACATTGTCAGGGAGCGTATCA
CCGACTTGATCCGTATGCTGCTCCTCCACAATGCTCGTCTGTGGCAATGG
GACGACGACTCAGCCGCATCCTCGTCCTCGTCCTCTCTCTCGTCCTCATC
AGGACGTCTTACCCAGCCCGAGGCAGGGTGGTGCCTCATCGACACGACAA
AAGGCATATTCGATGCAGTGGGTTGTGTAGCAGACGACGACGAAGAGCAT
GCGGCCTACAAGGCTGCGCAAGCCAAGGCGACCCGCATTATTGACATGAA
CATGAAATGCGCCGAAGGCAGCATTATTCTACCGGGTCTAATCGACGCGC
ACATTCACGTCGGTTACATGGGTGAGGCGCAAGAATACCTGCAACTTTCT
GGCTGTCGCACCTTGTCAGAGCTGGGTGCGGCCGTGGCGGCCTACGGCAA
GATGCATCCAAGCAAATCGTGGGTTGTGGGAGTAGGTTGGGACCAATCAG
CCTGGGGTGGAGATTATCCCTCGCGGCAGGACTTGGACAAAGCCATGGGT
GACGATAAGCGGCCTGTCGTATTGTACCGTGCATGTTGGCACATAGTCGT
GGCCAATACGGCTGCTTTGGAAGTAAGTGGGATATCGCTGATTCCCGCGA
AGAAGGTGGGTTAGGGGGAAATGCAAGGGAATTCAGGACACGTTTGTATG
CTTTCCGATTTTATTAGTGGGTGGTCCGGTGCATTTACGATGCAATTTTC
CCCCTTTACTAAAGTGGTGTAGAAGTCAACAAGTAAACTTTGATTCATGC
ATCCTCCTAATTTGTATAAGCCTTTCCTGAACCCAATGAGAGGTCGCACA
CCTGTCCCCCCCCGCTTTCTGTCCCCCCTCTCACCACAATCAATAGCCAC
CCGCTGGAATAGATATCGACGCCATTAGCGGCTTCCCTACGGGAATCTTT
CGAGAGAATGCAGTCTCAAGCATCACAGACCACATCGCCGAAGCCGACGA
CGACGTTCGCGAGACCTACTTCCGGAACGCCCTCAACCAGTGCCTCCGCG
CAGGCCTCACGTCGGTTCAAACAAATGACAGCAATGCCTGGCACCTTTAC
CGTAAGCTGGAATCTCAGCAGAAACTCCCCCTCCGCGTCTTTCTCACCGT
CAACCACGACGAATTTGAGAGCAACGTTAACCACAGCCAGCCCCTCCATC
CCTCCTTCGCCTCCCCCTCCTCTCTCCTCTCCTGCGAGCGTGTAAAACTC
TACTCCGACGGAAGTCTCGGTGCAGAAACTGCAGCATTGCGTTCTCCCTA
CGTTGGTACTACCAACACCGGCATGCTTATCCATACACTCGAAGAACTCA
GAGAAAAAATCAAGAGTGCGCACAAAGCAGGATTTCAGCTGGAGGTTCAT
GCGATAGGAAATCGAGCTTTAGAGACAGTGTTGGACGCGCTGGAAGGGGC
AGAGGTGCCTTCGGGAGCTCGACCCGTGATAACTCATTGTCAAGTCATGG
GGGAAGATCTGATGGAAAGGATGGCCTGGCAGGGGGTAGTTGCTTCGATC
CAGCCGTCGTTTGTCTCGACGGATTGTAAGTGGGTCCAAGCCCGGCTGCC
GGTTGAGGTGCAGCGTGTGTCGTATTGCTGGAAGAGTCTTGGGGAGCGAG
GAGTGATGTGTGCAGGGGGATCGGATGCCCCAGTGGAGGACTGTCGGCCT
TTGGGAGGGATTTATGACGCGATGCACCGGGTGCCGCATGCGGGTAAGCC
GAGGGGGGGAAGGAAGGATGGAGGGAGGAAAGGGAAGTGGCATTTTTGCC
GGAGGAGTGTTTGAGTTTCTCGGAAGCTTTAAGGCTGTACACAATTGGTG
GAGCGTATGCTTGTCATGCGGAGAGAAAGCTGGGTCGGATAGCACCGGGG
TATCAGGCTGATTTTGTTGTGATTGATAGGGATGTGACTGGGCCGAGGAG
GGAGGAGGACTGTCGGCACGCGTTGCTTGAGGCGGCCGTGGAGCAAGTGT
GGGTTGGGGGTGTGTGTCGCCTTGATACAAAAGGGGAAAACGAAAGAAAG
GTGTTCGCATCGGCTGCAATTTTGGGGGGGCCCTTCATTCCGGGCAAAAA
TGGGCCGCTCCGAGGACAAGGACGAAAGCAACCGCAACAGCTGGAGGAGG
AGGGCATGTGGGTACTGCAAAACAAACGGTTGGGTGCGGGCTGTTGTGGC
CATTGAACATTTAAAATATAGTGTAGTATGTATTCAGTTG back to topCoding sequence (CDS) from alignment at chr5:543253..545692- >NO05G02010.2 ID=NO05G02010.2|Name=NO05G02010.2|organism=Nannochloropsis oceanica|type=CDS|length=1509bp|location=Sequence derived from alignment at chr5:543253..545692- (Nannochloropsis oceanica) ATGCTGCTCCTCCACAATGCTCGTCTGTGGCAATGGGACGACGACTCAGC CGCATCCTCGTCCTCGTCCTCTCTCTCGTCCTCATCAGGACGTCTTACCC AGCCCGAGGCAGGGTGGTGCCTCATCGACACGACAAAAGGCATATTCGAT GCAGTGGGTTGTGTAGCAGACGACGACGAAGAGCATGCGGCCTACAAGGC TGCGCAAGCCAAGGCGACCCGCATTATTGACATGAACATGAAATGCGCCG AAGGCAGCATTATTCTACCGGGTCTAATCGACGCGCACATTCACGTCGGT TACATGGGTGAGGCGCAAGAATACCTGCAACTTTCTGGCTGTCGCACCTT GTCAGAGCTGGGTGCGGCCGTGGCGGCCTACGGCAAGATGCATCCAAGCA AATCGTGGGTTGTGGGAGTAGGTTGGGACCAATCAGCCTGGGGTGGAGAT TATCCCTCGCGGCAGGACTTGGACAAAGCCATGGGTGACGATAAGCGGCC TGTCGTATTGTACCGTGCATGTTGGCACATAGTCGTGGCCAATACGGCTG CTTTGGAAGTAAGTGGGATATCGCTGATTCCCGCGAAGAAGCCACCCGCT GGAATAGATATCGACGCCATTAGCGGCTTCCCTACGGGAATCTTTCGAGA GAATGCAGTCTCAAGCATCACAGACCACATCGCCGAAGCCGACGACGACG TTCGCGAGACCTACTTCCGGAACGCCCTCAACCAGTGCCTCCGCGCAGGC CTCACGTCGGTTCAAACAAATGACAGCAATGCCTGGCACCTTTACCGTAA GCTGGAATCTCAGCAGAAACTCCCCCTCCGCGTCTTTCTCACCGTCAACC ACGACGAATTTGAGAGCAACGTTAACCACAGCCAGCCCCTCCATCCCTCC TTCGCCTCCCCCTCCTCTCTCCTCTCCTGCGAGCGTGTAAAACTCTACTC CGACGGAAGTCTCGGTGCAGAAACTGCAGCATTGCGTTCTCCCTACGTTG GTACTACCAACACCGGCATGCTTATCCATACACTCGAAGAACTCAGAGAA AAAATCAAGAGTGCGCACAAAGCAGGATTTCAGCTGGAGGTTCATGCGAT AGGAAATCGAGCTTTAGAGACAGTGTTGGACGCGCTGGAAGGGGCAGAGG TGCCTTCGGGAGCTCGACCCGTGATAACTCATTGTCAAGTCATGGGGGAA GATCTGATGGAAAGGATGGCCTGGCAGGGGGTAGTTGCTTCGATCCAGCC GTCGTTTGTCTCGACGGATTGTAAGTGGGTCCAAGCCCGGCTGCCGGTTG AGGTGCAGCGTGTGTCGTATTGCTGGAAGAGTCTTGGGGAGCGAGGAGTG ATGTGTGCAGGGGGATCGGATGCCCCAGTGGAGGACTGTCGGCCTTTGGG AGGGATTTATGACGCGATGCACCGGGTGCCGCATGCGGGTAAGCCGAGGG GGGGAAGGAAGGATGGAGGGAGGAAAGGGAAGTGGCATTTTTGCCGGAGG AGTGTTTGA back to top
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