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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr5 | genome | chr5:526346..529337 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G01930.1 vs.
Match: AUX45106.1 (delta(12)-fatty acid dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 189.1 bits (479), Expect = 2.300e-44 Identity = 107/268 (39.93%), Postives = 145/268 (54.10%), Query Frame = 0
Query: 39 LTNDPIAWPTLILFAASLTTYLLPILLFHDNPTYWTVPVTAV-----ATYTMFTAMHEAAHRAISAEYRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHGPEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLLSKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMIGGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLELG 302
L PI WPT+ LF AS T + + T W PVTAV A Y +FT MHEA HR++ A +N +IG +S ++ APF A R H+ HHK+TN+ +DPDHWS G GP W+ P W TQ L+YY+ + R ++ E E V V L V+ G G + ++ P + LA++FDY PH+PH + A+D Y T + D V L QNYH IHHLYP +PFY+Y +W+ R+ LL+LG
Sbjct: 36 LQTRPIEWPTVALFGASYTLWAAAVAA---GLTGWVSPVTAVIAAAVAAYAVFTPMHEAGHRSL-ARSALLNGVIGRLSGVL-LMAPFLAVRHFHVEHHKHTNEADQDPDHWS-GRGPWWLLPLRWATQDLYYYYLFLRSYRAQKRGERIETVATMAVFLGLVALAFGLGYGEVVLLYWIAPARVAIFFLAFAFDYLPHYPHGVTAAQDRYRATRAV-------DSAIFNVLLFGQNYHLIHHLYPAVPFYRYRAVWKYQREELLKLG 290
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G01930.1 ID=NO05G01930.1|Name=NO05G01930.1|organism=Nannochloropsis oceanica|type=mRNA|length=2567bp
ACCGACATCACATCGATCAACTCTGCCCTCCCGTACATGTATTCGCAAGG
TCAACCCTTGGGGCCAGCGCCACTTAAGGCAAGATCTGATGCCTTGTGCG
TCTGTTGGGATATCTGGTGGCATCTTTTGTGCCCCCCAAGCTTTTTGCAC
AGGACGCCAAGACTTCCACTGCCACTATGCGTCAAGACCATTACACTTCA
AGGTGTCCATTCCCAGAGCCCTCCTTTTTTGATCCATGCATCACACGATG
TGAGGACCGTTCTCTGTGGGTTCATCATTTTCAGCTTCATTTACTTGCCC
GTATTGTGCATCACTTGCGCCTGTATCATTCTTTAACGAGTTGGCAACTC
ATTCCCCCCCTCCCTGACATTCACCACCGCTCTAAGAAACATGCCATTTG
CCCTTAACGTATTACTTTCTCCTTACCACACCATACTTGACAGATGATCG
ATCCCGCTTGTCGGTCTTTCCTTCCATCTGCACCACAAGCAACCAACTAC
AGTCATGACACCACGCATTCTCTCTTCCGAGGACCTTGAACCCTCCATGA
CCTCGACCACACGCCAGCGAGAGCCCAGTGTCAAAAGCCGTCGGGTGGCC
ATGGCCACGCATGACGAGCTGACCAACGACCCCATCGCCTGGCCCACCCT
CATCCTCTTCGCAGCCTCCCTCACTACCTACCTCCTCCCTATCCTCCTCT
TCCACGACAATCCGACGTACTGGACCGTTCCTGTTACAGCGGTGGCGACA
TATACCATGTTTACGGCCATGCACGAAGCGGCCCATCGGGCGATCTCGGC
AGAGTATCGATGGGTGAATGAGCTGATTGGACACATTTCCTCACTGATTT
GTTTCCAGGCGCCGTTTCAAGCATTTCGATTTATTCACTTGAGCCACCAC
AAGTACACGAATGACCCCAAAAAAGACCCCGATCATTGGTCAGCCGGACA
TGGCCCTGAGTGGGTTCAACCCTTTTTCTGGTGCACACAAACCCTGCATT
ATTATTGGCGATACTTCCGTGACATCTCCTCCCGCCCCTTCGACGAGGCC
GCCGAGGCCGTGCTCGTCACGCTCGTCATCCTCCTGAGCGTGTCCTTCCT
CCTTTCCAAAGGGTGCGGATACCAGCTCTGGATCTTTGTGGGGCTTCCCC
GAATGATAACTGACCCTTGCCTGGCCTACTCGTTTGATTACGCGCCTCAC
CACCCCCACGAGGCCTCGCGGGCAGAAGATGTGTATGGGTGCACGGCCAT
GATCGGTGGCTTGCTCTCTCCGGACGATGGCGTTGATCTGACGGTGCCCT
TGATATATCAGAATTATCACAACATCCATCACCTGTACCCGACAATTCCC
TTTTACAAGTACCCTCTTATGTGGCGCAACCACCGGAAGATCTTGCTTGA
GCTGGGAACACCGGTCGGGTCGTGGTTTGGCCCGCTCGTGTCGAGAAGGG
GGGGGAGGGAGCGAGGGGCAGGGAAGGGAAAGAGGGTGGTTGAGGAGCAA
GATCAGCAAAATAATTATCATGTGCATGCACAGTGAGGGGAAGGAAGAAG
AAAGGAAGCGAGGAAGAAGAGTAAAAACAGACTGCGTGTGCCTAAAGAGA
GGGGAAAGAGAGCATGAAGGCCAACGTGAGCCTGAGTTAGAGTCTGGGTG
GAGGGGAAAAAAGAGCAGCAAAGGCCGGGACGGGGGAAATGTTGCAACTG
TCATGTCACAGATTGTGCCCATGCGTGCTCTTTTTGTGCAAGCGTGCGTC
GAAATTGAAAACGACAAAGACAGAACCCGAGGATAGGCGAGAACAAGGAG
GAAAGTGAGGAACACCAACAAGATAGGCAAAGGGGCCTTGCTTAACATTT
TGAAAGGACATACGTCTGACGCGTGGGAGAAGGTGATGAGGCATCTATTT
ACACATACATCAGGGGGAGAATGGTTTTGGGGGCCATCCATATTGGATTT
TTTTCTTAATGGAAAAGAATGCAGCTGCGAACCACGGGAGACATTCGCAG
AAAGCTTCGAACCCTGTAGATCTGGGTTTGATTCATCATACACACCCCTA
TAAATACGTACAGCATAAGGTCAAATCTCCCCTACAGGGACGAGCTCGAA
GGGCGAAGGGAGGGGGGGAAAACGGAGAGTAATTCGGAAAGAAGACGAAG
GAAGAGGAGAAAAAAATTGAGCGATTTTTATCACACGAATGTATTGAGAG
GTAGAGGGAAAAGATTGATAGTCATTTTTTGGGGAAGCGGGCTGAAGAGA
CCAAAGAAGAGGATTGTTATCTACGTCTCTGACCGAAAAAGCGAGAAGAA
ACAGAGACAAGAGGAAGAAGTCCTAAAGCAGAGGAAAGAAGTGTGGTAGA
GACGGTAGCTACACTCCACCATTCATATGCCTGTGCAATCGAAGGGCACA
GAACACAAAAAGTGTGAGGGAAAGGACCATCACAGAAGCGACGATGACAC
GTTTGGGATGTCTCAAGTTTCTCTTCTATTCTAGTGCAAGTCAAAGACCG
AGCAGCAGATGAATATATGTAAAGAGACAAGACCCTTAAAAGAAAAACCA
AACGCTCCTCCATGGGG back to topprotein sequence of NO05G01930.1 >NO05G01930.1-protein ID=NO05G01930.1-protein|Name=NO05G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=344bp
MTPRILSSEDLEPSMTSTTRQREPSVKSRRVAMATHDELTNDPIAWPTLI
LFAASLTTYLLPILLFHDNPTYWTVPVTAVATYTMFTAMHEAAHRAISAE
YRWVNELIGHISSLICFQAPFQAFRFIHLSHHKYTNDPKKDPDHWSAGHG
PEWVQPFFWCTQTLHYYWRYFRDISSRPFDEAAEAVLVTLVILLSVSFLL
SKGCGYQLWIFVGLPRMITDPCLAYSFDYAPHHPHEASRAEDVYGCTAMI
GGLLSPDDGVDLTVPLIYQNYHNIHHLYPTIPFYKYPLMWRNHRKILLEL
GTPVGSWFGPLVSRRGGRERGAGKGKRVVEEQDQQNNYHVHAQ* back to topmRNA from alignment at chr5:526346..529337- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G01930.1 ID=NO05G01930.1|Name=NO05G01930.1|organism=Nannochloropsis oceanica|type=mRNA|length=2992bp|location=Sequence derived from alignment at chr5:526346..529337- (Nannochloropsis oceanica)
ACCGACATCACATCGATCAACTCTGCCCTCCCGTACATGTATTCGCAAGG
TCAACCCTTGGGGCCAGCGCCACTTAAGGCAAGATCTGATGCCTTGTGCG
TCTGTTGGGATATCTGGTGGCATCTTTTGTGCCCCCCAAGCTTTTTGCAC
AGGACGCCAAGACTTCCACTGCCACTATGCGTCAAGACCATTACACTTCA
AGGTGTCCATTCCCAGAGCCCTCCTTTTTTGATCCATGCATCACACGATG
TGAGGACCGTTCTCTGTGGGTTCATCATTTTCAGCTTCATTTACTTGCCC
GTATTGTGCATCACTTGCGCCTGTATCATTCTTTAACGAGTTGGCAACTC
ATTCCCCCCCTCCCTGACATTCACCACCGCTCTAAGAAACATGCCATTTG
CCCTTAACGTATTACTTTCTCCTTACCACACCATACTTGACAGATGATCG
ATCCCGCTTGTCGGTCTTTCCTTCCATCTGCACCACAAGCAACCAACTAC
AGTCATGACACCACGCATTCTCTCTTCCGAGGACCTTGAACCCTCCATGA
CCTCGACCACACGCCAGCGAGAGCCCAGTGTCAAAAGCCGTCGGGTACGT
GCTGTGTGTCTTGGCATGCGAGTATCCAATTCCTATTCCCATACTGTTCT
TCTGGGCTGGTGGGGTACCTGAGGGAAGGCATTTTGATTGTCTCCCCCGA
CCCGGACTGGGAGTTGTAGCCATTTTGTGTTTTTTTCTTGTACCATGCTG
CCGCTGGGCTTTTTTCTCCTCGTTTCTACTGATCTTGTTTTTCACATCGC
CCGTTCACGTTCTTTCCCGCCATGTTCTATCCTATATTCAGGTGGCCATG
GCCACGCATGACGAGCTGACCAACGACCCCATCGCCTGGCCCACCCTCAT
CCTCTTCGCAGCCTCCCTCACTACCTACCTCCTCCCTATCCTCCTCTTCC
ACGACAATCCGACGTACTGGACCGTTCCTGTTACAGCGGTGGCGACATAT
ACCATGTTTACGGCCATGCACGAAGCGGCCCATCGGGCGATCTCGGCAGA
GTATCGATGGGTGAATGAGCTGATTGGACACATTTCCTCACTGATTTGTT
TCCAGGCGCCGTTTCAAGCATTTCGATTTATTCACTTGAGCCACCACAAG
TACACGAATGACCCCAAAAAAGACCCGTGAGTTAATGTGAACCATTGGAA
CCAGAAGGTGGCGGGAGGGTCGGGGGGAAGGTGTGTCCATGTGTACGGGA
TCTATGCACTTTTACACTAAAATTGTTTTCCTCCGTATAAAACTCGACTC
CATCATGCTCAGCATTCCTCCCTTTCTTTCCCCCCTCTATCTTCTTCAAA
TCAGCGATCATTGGTCAGCCGGACATGGCCCTGAGTGGGTTCAACCCTTT
TTCTGGTGCACACAAACCCTGCATTATTATTGGCGATACTTCCGTGACAT
CTCCTCCCGCCCCTTCGACGAGGCCGCCGAGGCCGTGCTCGTCACGCTCG
TCATCCTCCTGAGCGTGTCCTTCCTCCTTTCCAAAGGGTGCGGATACCAG
CTCTGGATCTTTGTGGGGCTTCCCCGAATGATAACTGACCCTTGCCTGGC
CTACTCGTTTGATTACGCGCCTCACCACCCCCACGAGGCCTCGCGGGCAG
AAGATGTGTATGGGTGCACGGCCATGATCGGTGGCTTGCTCTCTCCGGAC
GATGGCGTTGATCTGACGGTGCCCTTGATATATCAGAATTATCACAACAT
CCATCACCTGTACCCGACAATTCCCTTTTACAAGTACCCTCTTATGTGGC
GCAACCACCGGAAGATCTTGCTTGAGCTGGGAACACCGGTCGGGTCGTGG
TTTGGCCCGCTCGTGTCGAGAAGGGGGGGGAGGGAGCGAGGGGCAGGGAA
GGGAAAGAGGGTGGTTGAGGAGCAAGATCAGCAAAATAATTATCATGTGC
ATGCACAGTGAGGGGAAGGAAGAAGAAAGGAAGCGAGGAAGAAGAGTAAA
AACAGACTGCGTGTGCCTAAAGAGAGGGGAAAGAGAGCATGAAGGCCAAC
GTGAGCCTGAGTTAGAGTCTGGGTGGAGGGGAAAAAAGAGCAGCAAAGGC
CGGGACGGGGGAAATGTTGCAACTGTCATGTCACAGATTGTGCCCATGCG
TGCTCTTTTTGTGCAAGCGTGCGTCGAAATTGAAAACGACAAAGACAGAA
CCCGAGGATAGGCGAGAACAAGGAGGAAAGTGAGGAACACCAACAAGATA
GGCAAAGGGGCCTTGCTTAACATTTTGAAAGGACATACGTCTGACGCGTG
GGAGAAGGTGATGAGGCATCTATTTACACATACATCAGGGGGAGAATGGT
TTTGGGGGCCATCCATATTGGATTTTTTTCTTAATGGAAAAGAATGCAGC
TGCGAACCACGGGAGACATTCGCAGAAAGCTTCGAACCCTGTAGATCTGG
GTTTGATTCATCATACACACCCCTATAAATACGTACAGCATAAGGTCAAA
TCTCCCCTACAGGGACGAGCTCGAAGGGCGAAGGGAGGGGGGGAAAACGG
AGAGTAATTCGGAAAGAAGACGAAGGAAGAGGAGAAAAAAATTGAGCGAT
TTTTATCACACGAATGTATTGAGAGGTAGAGGGAAAAGATTGATAGTCAT
TTTTTGGGGAAGCGGGCTGAAGAGACCAAAGAAGAGGATTGTTATCTACG
TCTCTGACCGAAAAAGCGAGAAGAAACAGAGACAAGAGGAAGAAGTCCTA
AAGCAGAGGAAAGAAGTGTGGTAGAGACGGTAGCTACACTCCACCATTCA
TATGCCTGTGCAATCGAAGGGCACAGAACACAAAAAGTGTGAGGGAAAGG
ACCATCACAGAAGCGACGATGACACGTTTGGGATGTCTCAAGTTTCTCTT
CTATTCTAGTGCAAGTCAAAGACCGAGCAGCAGATGAATATATGTAAAGA
GACAAGACCCTTAAAAGAAAAACCAAACGCTCCTCCATGGGG back to topCoding sequence (CDS) from alignment at chr5:526346..529337- >NO05G01930.1 ID=NO05G01930.1|Name=NO05G01930.1|organism=Nannochloropsis oceanica|type=CDS|length=1032bp|location=Sequence derived from alignment at chr5:526346..529337- (Nannochloropsis oceanica)
ATGACACCACGCATTCTCTCTTCCGAGGACCTTGAACCCTCCATGACCTC
GACCACACGCCAGCGAGAGCCCAGTGTCAAAAGCCGTCGGGTGGCCATGG
CCACGCATGACGAGCTGACCAACGACCCCATCGCCTGGCCCACCCTCATC
CTCTTCGCAGCCTCCCTCACTACCTACCTCCTCCCTATCCTCCTCTTCCA
CGACAATCCGACGTACTGGACCGTTCCTGTTACAGCGGTGGCGACATATA
CCATGTTTACGGCCATGCACGAAGCGGCCCATCGGGCGATCTCGGCAGAG
TATCGATGGGTGAATGAGCTGATTGGACACATTTCCTCACTGATTTGTTT
CCAGGCGCCGTTTCAAGCATTTCGATTTATTCACTTGAGCCACCACAAGT
ACACGAATGACCCCAAAAAAGACCCCGATCATTGGTCAGCCGGACATGGC
CCTGAGTGGGTTCAACCCTTTTTCTGGTGCACACAAACCCTGCATTATTA
TTGGCGATACTTCCGTGACATCTCCTCCCGCCCCTTCGACGAGGCCGCCG
AGGCCGTGCTCGTCACGCTCGTCATCCTCCTGAGCGTGTCCTTCCTCCTT
TCCAAAGGGTGCGGATACCAGCTCTGGATCTTTGTGGGGCTTCCCCGAAT
GATAACTGACCCTTGCCTGGCCTACTCGTTTGATTACGCGCCTCACCACC
CCCACGAGGCCTCGCGGGCAGAAGATGTGTATGGGTGCACGGCCATGATC
GGTGGCTTGCTCTCTCCGGACGATGGCGTTGATCTGACGGTGCCCTTGAT
ATATCAGAATTATCACAACATCCATCACCTGTACCCGACAATTCCCTTTT
ACAAGTACCCTCTTATGTGGCGCAACCACCGGAAGATCTTGCTTGAGCTG
GGAACACCGGTCGGGTCGTGGTTTGGCCCGCTCGTGTCGAGAAGGGGGGG
GAGGGAGCGAGGGGCAGGGAAGGGAAAGAGGGTGGTTGAGGAGCAAGATC
AGCAAAATAATTATCATGTGCATGCACAGTGA back to top
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