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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr5 | genome | chr5:477204..480133 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G01750.1 vs.
Match: EWM28285.1 (solute carrier family 36 (proton amino acid symporter) member 1 [Nannochloropsis gaditana]) HSP 1 Score: 525.8 bits (1353), Expect = 1.600e-145 Identity = 288/450 (64.00%), Postives = 337/450 (74.89%), Query Frame = 0
Query: 137 KELLREEQGLVVENYEELAGAIFGPRAFRFCRFLMATITLIYTSGFVIVIGSSLNDVLPAVHRAVWCGLLFPVLTILSWIPFMKDLWFVSLLGLGTYLIGVVGSTIYFANHNYDSPTPSPWEWRWEGAPHFYGVAVYSLEGINLTLPVSASMKSLQKPPYVMTMGVCLFAGVTAFYSSYAYAAGLGSCDIIIQCLGRGAFVNIVRVALALSLIATHPVYLIVASEIFERALLGDPLATVPPITE----------EGEQEGGG---------VMPAAGNQLHGCGV---------------------LQGE----EDASRRRTSEG--TNDSSRLITNDPFLFSSTCSLLPSFLLTQQAQARIIRAIEVLLTCLVGACVPNLGAFTSLIGATFVTLIGFVFPAAMWWALQKEDVHASSWEKARVYGVAGLVILAGLVAMVVGTVESVRNIA 541
++LLREEQG+VVENYEELAGA+FGPRAFRFC+ LMAT+TLIYTSGFVIVI SSL DV+PAV RA+WC ++FP+LT+LSW+PFM+DLWFVSLLGLGTYL GVVGST++ A ++D P P+P W WEGA HFYGVAVYSLEGINLTLPVSASMKSL+KPP VMT+GVCLFAG+TAFY+S+AYAAGLGSCDIIIQCLG G FVN++RVALALSL+ATHPVYLIVASEIFERALLGDP VP + E E EG G V+ +G+ + V +QGE ED R S G T +SR + P L +S S L T+QAQAR+IRA+EV LTC+VGA +PNLG FTSL+GATFVT+IGF+FPAAMW LQ+ED HAS W KARVYG+AGLVI AGL AMVVGTVE +RN++
Sbjct: 51 QDLLREEQGIVVENYEELAGAVFGPRAFRFCQTLMATLTLIYTSGFVIVISSSLYDVMPAVPRAMWCAIVFPILTLLSWVPFMEDLWFVSLLGLGTYLFGVVGSTLFVAARDFDPP-PAPMAWHWEGAAHFYGVAVYSLEGINLTLPVSASMKSLRKPPLVMTVGVCLFAGITAFYASFAYAAGLGSCDIIIQCLGPGPFVNVIRVALALSLLATHPVYLIVASEIFERALLGDPSVPVPEALDGAQETEEAGLEDETEGAGTAMTGAMLPVVCRSGSHQNSSWVDHSEDGRSHAKATSPQRLEVSVQGEDNGREDGLHERESMGASTQSNSRTSASLP-LPASISSFASRRLATRQAQARLIRAVEVFLTCMVGALIPNLGVFTSLVGATFVTIIGFIFPAAMWLELQREDTHASFWAKARVYGIAGLVIAAGLAAMVVGTVEGLRNLS 498
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G01750.1 ID=NO05G01750.1|Name=NO05G01750.1|organism=Nannochloropsis oceanica|type=mRNA|length=2824bp GTGACTGTATGGGCCAACGATGGGGTACAGATGGGCCTGTCGTCACGCGA GAAAACCTGAATTAACGAAAAGATGACGAGGCGGGGGATTTCTTGTGTGT CGGATGATTTCATCTGCCAGGATGTCGTGTTTGGACACGATGTTGTGTAG AAGATGATTCATGACTTGATTCTACCCCGTCGCGAACGAGTAGTACAACA GACCCGAAAGACTCTGTGCCTCCCTCCGTCCTCGTCCTCGTTCAGCGACA CACTAATCCGCACGACACACACTAATTGTACAGGCGCACTATCATGGCCA GCACTAACAGCACCACTATGATAAGGTCTAGCAGCGTCCGCTTGACATAA AGCCCGGGTCTCTTACACCTTATGCAACCGGCACAACGGACCCGCATCAT GCGCCGTGGAGTGTATGCTCGATAACGTCCTTCAATGTTGCCCCCCACCG CTAGCTACCGAAGGCACATTTGTGTTTGACGCACGAGCAATCAATGGACC TGCTGTAGGACATTAGCAGCATGCCAGAAGTGAGAGAAGAGCTCACGGCT GCGATAGGAATCCACGAGCCGACTTATCCCGCGGACAACCGCGTGAATCA ACTGCATGTGAATCTTACCACGGGCTGCTTGACAAACAGGAAAACCTTCG TCGCTTGCATACACGCGATAGGTCTTTATCGGCACCTATGCGACAAGCAC AACGTCTTCTCATCCCCTTCCTCTACCATTACCCGACCACAGGACCCCCA AAAACAATGCGTCCCGTTTTGCCCACGGCCCCCCCAACGTCACTTCCCGC CATCACGCCCGACTCGTCCACATGCTCTACCACCCCTTTGTCAGGAGTAG CAGGCTATCGCAAGCTATCAAGTGAAAATGGTGGCACGATCAATGGCACG ACATCCCCATCTTCACAACATCATAACAAAACCAGCACGCGCATTGCGTT GTTGATTTTTTTCAAAGGCCTTTTTGGCGCCGGTGTGTTGGCGATTCCAG GGGCTTTTGAGAGCACGGGGGTCCCCTTGGGCTTGTTGATCTTTCTGTCT GTCTCATCATTGTGTCTTGGGACAATGCTTATGCTGCTGCGTTGCAAGGA GCTCCTTCGCGAGGAACAAGGCCTGGTCGTGGAAAATTACGAGGAGCTGG CCGGAGCTATCTTCGGACCGCGTGCCTTCCGCTTCTGTCGCTTTCTGATG GCGACCATTACGTTGATTTATACGTCTGGGTTTGTCATAGTAATTGGCAG CAGCTTGAACGACGTCCTCCCGGCCGTGCATCGCGCCGTGTGGTGTGGAT TGCTGTTTCCGGTGTTGACGATTCTGTCCTGGATCCCCTTCATGAAGGAC CTGTGGTTTGTGTCGCTCTTGGGATTGGGCACCTACTTGATAGGAGTGGT GGGCTCGACGATTTACTTTGCCAATCACAACTATGACTCTCCCACTCCTT CTCCGTGGGAGTGGAGGTGGGAGGGGGCGCCGCATTTTTACGGTGTGGCA GTGTATTCCTTGGAAGGGATAAATTTGACACTGCCGGTTTCGGCTTCGAT GAAAAGCCTGCAAAAACCTCCTTATGTGATGACGATGGGCGTGTGCCTCT TTGCGGGAGTCACGGCATTTTATTCCTCCTATGCGTATGCTGCTGGGCTA GGCTCGTGTGATATCATCATTCAATGCCTGGGTCGGGGGGCCTTCGTCAA TATAGTCAGGGTCGCCCTGGCTCTATCCCTCATAGCCACGCATCCTGTGT ACTTAATTGTTGCTTCGGAGATTTTCGAGCGTGCCTTGTTGGGGGATCCG CTTGCTACCGTGCCTCCAATTACAGAGGAGGGAGAGCAGGAGGGAGGAGG GGTGATGCCGGCGGCTGGCAATCAGCTGCACGGCTGTGGGGTTTTACAGG GGGAGGAGGATGCGAGCAGGAGAAGAACGTCCGAGGGAACCAACGACAGC AGCCGCCTCATCACCAATGATCCCTTCTTATTCTCTTCCACATGCTCCCT CCTCCCGTCCTTCCTCCTCACCCAACAAGCCCAAGCTCGCATCATCCGAG CAATCGAGGTCCTTCTCACTTGCCTCGTCGGCGCCTGTGTTCCTAACCTA GGGGCTTTCACCTCTCTCATCGGTGCTACTTTTGTGACTCTCATCGGCTT CGTATTCCCTGCCGCCATGTGGTGGGCTCTGCAGAAAGAGGATGTGCATG CCTCTTCGTGGGAGAAAGCAAGAGTGTACGGAGTGGCGGGCCTTGTGATT CTTGCGGGACTGGTTGCAATGGTGGTGGGTACGGTAGAGAGTGTGAGAAA CATCGCGAAGTAATGAGGAAGAGGGGAGCAAGGTAAAGGGAAGGGAGAGG TGTGTTGCTCACGAGGTGCAGTGACGAGTGTGTGGCGAGCTGAATCTCCT GAGTTCTGCATACCTGAGAGGTTGAGGGACGAAGTGAAAGGGGAGGGAAG GAAGGCATGGGTGCCTGACATGGGAGGAGGAAGAGAGGACGAGGAAAATG ACAAGAGCGAGACAAAATTATGTACAGCTTTTCAAAGTGGAAAAGTAAAT CAAAATACGGGTAAGCGATAGGATCAGAGGTCATCTTCGTTTTTCTACCC CACCTCCCTCCCCATTTCTACTTTCTATGATAACATGTTTCCTCCTTCTC CTCTCCTAATTCTCCACCTTCCCGTTGTGAGTATCTGTTCTTGAATGGTT TATTGGCTTTCTAATGATTGTGCTGGAAAGAGTCGGCCACGCAGGCATGT GCGTATGCAATCTCGTATGACATAGTGCACCCTCCATAGAATGGTGCTTT TCTTGCTCCAAAACTCTCTCTCTC back to topprotein sequence of NO05G01750.1 >NO05G01750.1-protein ID=NO05G01750.1-protein|Name=NO05G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=542bp MRQAQRLLIPFLYHYPTTGPPKTMRPVLPTAPPTSLPAITPDSSTCSTTP LSGVAGYRKLSSENGGTINGTTSPSSQHHNKTSTRIALLIFFKGLFGAGV LAIPGAFESTGVPLGLLIFLSVSSLCLGTMLMLLRCKELLREEQGLVVEN YEELAGAIFGPRAFRFCRFLMATITLIYTSGFVIVIGSSLNDVLPAVHRA VWCGLLFPVLTILSWIPFMKDLWFVSLLGLGTYLIGVVGSTIYFANHNYD SPTPSPWEWRWEGAPHFYGVAVYSLEGINLTLPVSASMKSLQKPPYVMTM GVCLFAGVTAFYSSYAYAAGLGSCDIIIQCLGRGAFVNIVRVALALSLIA THPVYLIVASEIFERALLGDPLATVPPITEEGEQEGGGVMPAAGNQLHGC GVLQGEEDASRRRTSEGTNDSSRLITNDPFLFSSTCSLLPSFLLTQQAQA RIIRAIEVLLTCLVGACVPNLGAFTSLIGATFVTLIGFVFPAAMWWALQK EDVHASSWEKARVYGVAGLVILAGLVAMVVGTVESVRNIAK* back to topmRNA from alignment at chr5:477204..480133- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G01750.1 ID=NO05G01750.1|Name=NO05G01750.1|organism=Nannochloropsis oceanica|type=mRNA|length=2930bp|location=Sequence derived from alignment at chr5:477204..480133- (Nannochloropsis oceanica) GTGACTGTATGGGCCAACGATGGGGTACAGATGGGCCTGTCGTCACGCGA
GAAAACCTGAATTAACGAAAAGATGACGAGGCGGGGGATTTCTTGTGTGT
CGGATGATTTCATCTGCCAGGATGTCGTGTTTGGACACGATGTTGTGTAG
AAGATGATTCATGACTTGATTCTACCCCGTCGCGAACGAGTAGTACAACA
GACCCGAAAGACTCTGTGCCTCCCTCCGTCCTCGTCCTCGTTCAGCGACA
CACTAATCCGCACGACACACACTAATTGTACAGGCGCACTATCATGGCCA
GCACTAACAGCACCACTATGATAAGGTCTAGCAGCGTCCGCTTGACATAA
AGCCCGGGTCTCTTACACCTTATGCAACCGGCACAACGGACCCGCATCAT
GCGCCGTGGAGTGTATGCTCGATAACGTCCTTCAATGTTGCCCCCCACCG
CTAGCTACCGAAGGCACATTTGTGTTTGACGCACGAGCAATCAATGGACC
TGCTGTAGGACATTAGCAGCATGCCAGAAGTGAGAGAAGAGCTCACGGCT
GCGATAGGAATCCACGAGCCGACTTATCCCGCGGACAACCGCGTGAATCA
ACTGCATGTGAATCTTACCACGGGCTGCTTGACAAACAGGAAAACCTTCG
TCGCTTGCATACACGCGATAGGTCTTTATCGGCACCTATGCGACAAGCAC
AACGTCTTCTCATCCCCTTCCTCTACCATTACCCGACCACAGGACCCCCA
AAAACAATGCGTCCCGTTTTGCCCACGGCCCCCCCAACGTCACTTCCCGC
CATCACGCCCGACTCGTCCACATGCTCTACCACCCCTTTGTCAGGAGTAG
CAGGCTATCGCAAGCTATCAAGTGAAAATGGTGGCACGATCAATGGCACG
ACATCCCCATCTTCACAACATCATAACAAAACCAGCACGCGCATTGCGTT
GTTGATTTTTTTCAAAGGCCTTTTTGGCGCCGGTGTGTTGGCGATTCCAG
GGGCTTTTGAGAGCACGGGGGTCCCCTTGGGCTTGTTGATCTTTCTGTCT
GTCTCATCATTGTGTCTTGGGACAATGCTTATGCTGCTGCGTTGCAAGGT
AAGGTGAACGTAATTGAAACGGTTTTTCTTGTCGCTTGCTTACCGTACTT
TGAGCCCTCCTGTGCCAACTCATGTACTCATCCCTCCCTCCCTCTCTCCC
TTAGGAGCTCCTTCGCGAGGAACAAGGCCTGGTCGTGGAAAATTACGAGG
AGCTGGCCGGAGCTATCTTCGGACCGCGTGCCTTCCGCTTCTGTCGCTTT
CTGATGGCGACCATTACGTTGATTTATACGTCTGGGTTTGTCATAGTAAT
TGGCAGCAGCTTGAACGACGTCCTCCCGGCCGTGCATCGCGCCGTGTGGT
GTGGATTGCTGTTTCCGGTGTTGACGATTCTGTCCTGGATCCCCTTCATG
AAGGACCTGTGGTTTGTGTCGCTCTTGGGATTGGGCACCTACTTGATAGG
AGTGGTGGGCTCGACGATTTACTTTGCCAATCACAACTATGACTCTCCCA
CTCCTTCTCCGTGGGAGTGGAGGTGGGAGGGGGCGCCGCATTTTTACGGT
GTGGCAGTGTATTCCTTGGAAGGGATAAATTTGACACTGCCGGTTTCGGC
TTCGATGAAAAGCCTGCAAAAACCTCCTTATGTGATGACGATGGGCGTGT
GCCTCTTTGCGGGAGTCACGGCATTTTATTCCTCCTATGCGTATGCTGCT
GGGCTAGGCTCGTGTGATATCATCATTCAATGCCTGGGTCGGGGGGCCTT
CGTCAATATAGTCAGGGTCGCCCTGGCTCTATCCCTCATAGCCACGCATC
CTGTGTACTTAATTGTTGCTTCGGAGATTTTCGAGCGTGCCTTGTTGGGG
GATCCGCTTGCTACCGTGCCTCCAATTACAGAGGAGGGAGAGCAGGAGGG
AGGAGGGGTGATGCCGGCGGCTGGCAATCAGCTGCACGGCTGTGGGGTTT
TACAGGGGGAGGAGGATGCGAGCAGGAGAAGAACGTCCGAGGGAACCAAC
GACAGCAGCCGCCTCATCACCAATGATCCCTTCTTATTCTCTTCCACATG
CTCCCTCCTCCCGTCCTTCCTCCTCACCCAACAAGCCCAAGCTCGCATCA
TCCGAGCAATCGAGGTCCTTCTCACTTGCCTCGTCGGCGCCTGTGTTCCT
AACCTAGGGGCTTTCACCTCTCTCATCGGTGCTACTTTTGTGACTCTCAT
CGGCTTCGTATTCCCTGCCGCCATGTGGTGGGCTCTGCAGAAAGAGGATG
TGCATGCCTCTTCGTGGGAGAAAGCAAGAGTGTACGGAGTGGCGGGCCTT
GTGATTCTTGCGGGACTGGTTGCAATGGTGGTGGGTACGGTAGAGAGTGT
GAGAAACATCGCGAAGTAATGAGGAAGAGGGGAGCAAGGTAAAGGGAAGG
GAGAGGTGTGTTGCTCACGAGGTGCAGTGACGAGTGTGTGGCGAGCTGAA
TCTCCTGAGTTCTGCATACCTGAGAGGTTGAGGGACGAAGTGAAAGGGGA
GGGAAGGAAGGCATGGGTGCCTGACATGGGAGGAGGAAGAGAGGACGAGG
AAAATGACAAGAGCGAGACAAAATTATGTACAGCTTTTCAAAGTGGAAAA
GTAAATCAAAATACGGGTAAGCGATAGGATCAGAGGTCATCTTCGTTTTT
CTACCCCACCTCCCTCCCCATTTCTACTTTCTATGATAACATGTTTCCTC
CTTCTCCTCTCCTAATTCTCCACCTTCCCGTTGTGAGTATCTGTTCTTGA
ATGGTTTATTGGCTTTCTAATGATTGTGCTGGAAAGAGTCGGCCACGCAG
GCATGTGCGTATGCAATCTCGTATGACATAGTGCACCCTCCATAGAATGG
TGCTTTTCTTGCTCCAAAACTCTCTCTCTC back to topCoding sequence (CDS) from alignment at chr5:477204..480133- >NO05G01750.1 ID=NO05G01750.1|Name=NO05G01750.1|organism=Nannochloropsis oceanica|type=CDS|length=1626bp|location=Sequence derived from alignment at chr5:477204..480133- (Nannochloropsis oceanica) ATGCGACAAGCACAACGTCTTCTCATCCCCTTCCTCTACCATTACCCGAC CACAGGACCCCCAAAAACAATGCGTCCCGTTTTGCCCACGGCCCCCCCAA CGTCACTTCCCGCCATCACGCCCGACTCGTCCACATGCTCTACCACCCCT TTGTCAGGAGTAGCAGGCTATCGCAAGCTATCAAGTGAAAATGGTGGCAC GATCAATGGCACGACATCCCCATCTTCACAACATCATAACAAAACCAGCA CGCGCATTGCGTTGTTGATTTTTTTCAAAGGCCTTTTTGGCGCCGGTGTG TTGGCGATTCCAGGGGCTTTTGAGAGCACGGGGGTCCCCTTGGGCTTGTT GATCTTTCTGTCTGTCTCATCATTGTGTCTTGGGACAATGCTTATGCTGC TGCGTTGCAAGGAGCTCCTTCGCGAGGAACAAGGCCTGGTCGTGGAAAAT TACGAGGAGCTGGCCGGAGCTATCTTCGGACCGCGTGCCTTCCGCTTCTG TCGCTTTCTGATGGCGACCATTACGTTGATTTATACGTCTGGGTTTGTCA TAGTAATTGGCAGCAGCTTGAACGACGTCCTCCCGGCCGTGCATCGCGCC GTGTGGTGTGGATTGCTGTTTCCGGTGTTGACGATTCTGTCCTGGATCCC CTTCATGAAGGACCTGTGGTTTGTGTCGCTCTTGGGATTGGGCACCTACT TGATAGGAGTGGTGGGCTCGACGATTTACTTTGCCAATCACAACTATGAC TCTCCCACTCCTTCTCCGTGGGAGTGGAGGTGGGAGGGGGCGCCGCATTT TTACGGTGTGGCAGTGTATTCCTTGGAAGGGATAAATTTGACACTGCCGG TTTCGGCTTCGATGAAAAGCCTGCAAAAACCTCCTTATGTGATGACGATG GGCGTGTGCCTCTTTGCGGGAGTCACGGCATTTTATTCCTCCTATGCGTA TGCTGCTGGGCTAGGCTCGTGTGATATCATCATTCAATGCCTGGGTCGGG GGGCCTTCGTCAATATAGTCAGGGTCGCCCTGGCTCTATCCCTCATAGCC ACGCATCCTGTGTACTTAATTGTTGCTTCGGAGATTTTCGAGCGTGCCTT GTTGGGGGATCCGCTTGCTACCGTGCCTCCAATTACAGAGGAGGGAGAGC AGGAGGGAGGAGGGGTGATGCCGGCGGCTGGCAATCAGCTGCACGGCTGT GGGGTTTTACAGGGGGAGGAGGATGCGAGCAGGAGAAGAACGTCCGAGGG AACCAACGACAGCAGCCGCCTCATCACCAATGATCCCTTCTTATTCTCTT CCACATGCTCCCTCCTCCCGTCCTTCCTCCTCACCCAACAAGCCCAAGCT CGCATCATCCGAGCAATCGAGGTCCTTCTCACTTGCCTCGTCGGCGCCTG TGTTCCTAACCTAGGGGCTTTCACCTCTCTCATCGGTGCTACTTTTGTGA CTCTCATCGGCTTCGTATTCCCTGCCGCCATGTGGTGGGCTCTGCAGAAA GAGGATGTGCATGCCTCTTCGTGGGAGAAAGCAAGAGTGTACGGAGTGGC GGGCCTTGTGATTCTTGCGGGACTGGTTGCAATGGTGGTGGGTACGGTAG AGAGTGTGAGAAACATCGCGAAGTAA back to top
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