NO05G01510.1, NO05G01510.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G01510.1
Unique NameNO05G01510.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2109
Alignment locationchr5:425687..427795 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:425687..427795 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO05G01510.1 vs.
Match: EWM28166.1 (mrna capping enzyme family protein [Nannochloropsis gaditana])

HSP 1 Score: 864.4 bits (2232), Expect = 2.500e-247
Identity = 465/725 (64.14%), Postives = 532/725 (73.38%), Query Frame = 0 
Query:    1 MATVPSAPTPTIVDQLIKKGAMLHKLSVVDDKNNVSLLGTFLDDAHGPPSQSILNHLICRNEYEKNLPLVTSLDSFALIAYSKEKDYRRTSDFVGYLQGRKKAAKVFVDKSGTGGYLYPGPSLTTPDGIPCLRCYYESGRSRNINSSSTNKKRLASPSM------------DGLPAVPIPTGASVAKRARTAGRMPHFEYIPPDPISPSNLPLSFPSSSSPTISGEEGPVYFLGREGENGSVSTSFTSTNLFPPLL-DPSQFPCSQDPRFKYVPPTPMKGQIPPPFYHDPDACPVIEGLTLTPDQAALASSAVAAAAAVTRLPPSPGAIPGRGGEGGGGGRGGGG----RGGAAWGKDQKVAEGFYNQLKREKGTRNQSLVFHLRKLNNWVKAQLINSLKPAPVKKGKGGAGRELEVLDLACGKGGDFTKWREVSRRYPIARYVGVDIAKSSLVDAIGRYHQDNHIRGALGSTLTLACADLGGTDLVEDEVEVWEATEDKWDKRPLLDEDDTFDCITMQFALHYMFETEGRARKFLQVVATHLRKGGSFIATTVDARVVVEMLVGLGRREGGKGGEWVARLVDEKKRELCRLQVDDATYQQLLRPARRGGEGGKEEEK------ETPFCGLRYKFLLRDGLEENGAADAVNAPEWMIPLPFLEAAAKEYGLKLEKAQNFHELVEEHRAHIDGGRAGIRWVNYQGSISPTEWDIARIYVALKFTRI 703
            MAT P  P    V  LI+KGAMLHK SVVDD +N +L+GTFLDD  GPPSQSILNHLICRNEYEKNLPLVTSL  F L+AYSKEKDYRR SDFV YLQGRKKAAKV +DK GT GYL+PGPS TTP G+PCLRC+Y+     N    +T+KK+ A+P+             D   A   P   S AKR RT+     F Y+PPDP     LP+S  S ++   S E      LG     G  S+S T     PP L DPSQFP S+DPRF Y PPTP++GQ+ PPFY DP +CPV+ GL   P++A ++    +         P+       G + G  GR         G + WGKDQ+VAEGFYNQL+REKG RNQSLVFHLRKLNNWVK+QLIN L+PA  + G+G   RELEVLDLACGKGGDFTKWREVSRR+P+ARYVGVDIAK+SL+DAIGRYHQD HIR ALG+TLTLACADLG  DLVEDE+EVWEATED W +RPLLDE D FD +TMQFALHYMFE EGRAR FL+ VA HLR GG+FIATTVDARVVVEM+ GLGR+E  +GGEWVARLVDE+KRELCRLQVDDATY QL RP     EG +E+ K      ++PFCGLRYKFLL+DG EE+GA DAVNAPEWMIPLP LEAAA EYGL+LE+AQNFHELVEEHRA  DG R GI W+NYQGSISP EW+IARIY+ALKFTR+
Sbjct:    1 MAT-PLPPEAPPVHSLIQKGAMLHKFSVVDDSSNATLIGTFLDDTQGPPSQSILNHLICRNEYEKNLPLVTSLSFFGLVAYSKEKDYRRVSDFVSYLQGRKKAAKVQLDKVGTVGYLFPGPSPTTPSGVPCLRCHYQP----NHPLPTTDKKKRAAPTSPAARTIDPNSAHDTGMAPTSPPAESTAKRGRTSVPRAKFTYLPPDP-----LPVSTTSPTTSQESDENAVTPSLG-----GEESSSHTCPPSPPPALPDPSQFPRSRDPRFAYAPPTPVEGQVVPPFYDDPGSCPVVRGLE-PPEEADVSRGGSSGY-------PTSAKADDTGKDAGVLGRRAAAPSTETGNSGWGKDQRVAEGFYNQLRREKGARNQSLVFHLRKLNNWVKSQLINGLRPATSETGQGQGRRELEVLDLACGKGGDFTKWREVSRRFPVARYVGVDIAKTSLIDAIGRYHQDRHIRAALGATLTLACADLGSMDLVEDELEVWEATEDAWSRRPLLDEGDLFDAVTMQFALHYMFEDEGRARFFLKTVARHLRVGGTFIATTVDARVVVEMMAGLGRKE--EGGEWVARLVDEEKRELCRLQVDDATYWQLFRPCPGMQEGSEEQSKDEQVGGDSPFCGLRYKFLLKDGSEEDGAGDAVNAPEWMIPLPLLEAAAGEYGLRLEQAQNFHELVEEHRAQADGKRGGIHWLNYQGSISPIEWEIARIYIALKFTRV 700
The following BLAST results are available for this feature:
BLAST of NO05G01510.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28166.12.500e-24764.14mrna capping enzyme family protein [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01510NO05G01510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G01510.1NO05G01510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G01510.1.cds1NO05G01510.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G01510.1 ID=NO05G01510.1|Name=NO05G01510.1|organism=Nannochloropsis oceanica|type=mRNA|length=2109bp
ATGGCGACTGTCCCCAGCGCCCCCACGCCCACCATTGTTGACCAGCTGAT
TAAAAAAGGGGCCATGCTGCACAAGCTCTCCGTGGTGGACGACAAGAACA
ACGTCAGCTTGCTGGGCACCTTCCTGGACGACGCCCACGGCCCCCCAAGC
CAGTCGATCCTCAATCACCTTATCTGCCGGAACGAATACGAAAAAAACTT
ACCCCTCGTCACCTCTCTCGACTCATTTGCCCTCATCGCCTACTCAAAAG
AAAAAGACTATCGGCGCACCTCTGACTTTGTCGGGTACTTGCAAGGCCGA
AAAAAGGCAGCCAAAGTCTTCGTCGATAAGAGCGGTACTGGAGGCTACCT
CTATCCCGGTCCCTCCCTTACCACTCCCGATGGCATCCCCTGCCTCCGTT
GCTACTACGAGTCAGGCCGTTCCCGCAACATCAACAGCAGCAGCACCAAC
AAGAAACGCCTTGCCTCCCCCTCCATGGACGGACTTCCTGCAGTTCCCAT
CCCCACGGGCGCCTCGGTTGCGAAGCGTGCCCGAACGGCGGGCCGTATGC
CACATTTTGAATATATACCTCCAGACCCCATTTCCCCCTCCAACCTACCT
CTCTCTTTCCCCTCCTCATCCTCTCCAACAATAAGCGGGGAAGAAGGTCC
TGTATATTTCCTAGGGCGAGAAGGCGAAAATGGCTCCGTCTCCACCTCCT
TCACCTCCACCAATCTTTTCCCCCCACTACTCGACCCTTCTCAATTCCCT
TGTAGTCAAGACCCGCGTTTCAAGTACGTGCCACCCACGCCAATGAAAGG
ACAGATTCCGCCTCCTTTCTACCACGATCCCGATGCTTGTCCTGTCATCG
AAGGACTTACCCTCACCCCCGACCAAGCCGCCCTCGCTTCCTCAGCAGTG
GCGGCAGCAGCAGCAGTAACACGGCTGCCGCCATCACCTGGTGCAATACC
AGGAAGAGGAGGAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGACGGG
GGGGAGCAGCGTGGGGAAAAGATCAAAAGGTGGCCGAGGGTTTTTATAAT
CAGTTAAAGCGTGAGAAGGGCACGAGGAATCAGAGCCTTGTCTTCCACCT
CCGCAAGCTCAACAACTGGGTGAAGGCCCAACTCATCAATTCCTTGAAGC
CCGCACCTGTCAAGAAAGGTAAGGGAGGGGCGGGGAGGGAGCTGGAGGTT
TTGGACCTGGCATGTGGGAAGGGCGGCGATTTCACTAAGTGGAGGGAGGT
GAGTCGTCGTTACCCCATTGCCCGATATGTTGGTGTGGACATCGCAAAGA
GTTCGTTGGTTGACGCCATTGGCAGGTATCATCAGGATAACCATATAAGA
GGGGCCCTGGGGTCAACTTTGACGTTGGCCTGTGCGGACTTGGGAGGGAC
AGATCTAGTCGAGGACGAGGTGGAGGTGTGGGAGGCGACGGAGGATAAAT
GGGACAAGCGGCCACTGCTGGATGAGGATGACACATTTGATTGCATTACG
ATGCAGTTTGCCTTGCATTACATGTTTGAGACGGAGGGGCGGGCGAGAAA
GTTTCTGCAGGTGGTGGCGACGCATTTGAGGAAGGGGGGGAGTTTCATCG
CGACTACTGTTGATGCCAGAGTGGTGGTGGAGATGTTGGTCGGTTTGGGG
AGGAGGGAAGGAGGAAAAGGGGGGGAATGGGTGGCACGATTGGTGGATGA
GAAGAAGAGGGAACTGTGTCGGTTGCAGGTGGATGACGCGACGTATCAGC
AGTTATTGAGGCCGGCGAGAAGAGGAGGTGAAGGAGGGAAGGAGGAAGAA
AAGGAAACGCCCTTTTGTGGGTTAAGGTACAAGTTTTTGTTGAGAGATGG
GTTGGAGGAAAATGGAGCGGCGGATGCTGTCAATGCACCGGAATGGATGA
TCCCGTTACCATTTTTAGAGGCGGCTGCGAAGGAATATGGATTAAAGTTG
GAAAAGGCGCAGAATTTTCATGAGTTGGTGGAGGAGCACAGAGCACATAT
TGATGGCGGACGGGCGGGGATACGTTGGGTGAATTATCAGGGGAGTATAA
GTCCGACGGAGTGGGACATTGCGCGTATTTACGTGGCCTTGAAATTCACG
AGGATATGA
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protein sequence of NO05G01510.1

>NO05G01510.1-protein ID=NO05G01510.1-protein|Name=NO05G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=703bp
MATVPSAPTPTIVDQLIKKGAMLHKLSVVDDKNNVSLLGTFLDDAHGPPS
QSILNHLICRNEYEKNLPLVTSLDSFALIAYSKEKDYRRTSDFVGYLQGR
KKAAKVFVDKSGTGGYLYPGPSLTTPDGIPCLRCYYESGRSRNINSSSTN
KKRLASPSMDGLPAVPIPTGASVAKRARTAGRMPHFEYIPPDPISPSNLP
LSFPSSSSPTISGEEGPVYFLGREGENGSVSTSFTSTNLFPPLLDPSQFP
CSQDPRFKYVPPTPMKGQIPPPFYHDPDACPVIEGLTLTPDQAALASSAV
AAAAAVTRLPPSPGAIPGRGGEGGGGGRGGGGRGGAAWGKDQKVAEGFYN
QLKREKGTRNQSLVFHLRKLNNWVKAQLINSLKPAPVKKGKGGAGRELEV
LDLACGKGGDFTKWREVSRRYPIARYVGVDIAKSSLVDAIGRYHQDNHIR
GALGSTLTLACADLGGTDLVEDEVEVWEATEDKWDKRPLLDEDDTFDCIT
MQFALHYMFETEGRARKFLQVVATHLRKGGSFIATTVDARVVVEMLVGLG
RREGGKGGEWVARLVDEKKRELCRLQVDDATYQQLLRPARRGGEGGKEEE
KETPFCGLRYKFLLRDGLEENGAADAVNAPEWMIPLPFLEAAAKEYGLKL
EKAQNFHELVEEHRAHIDGGRAGIRWVNYQGSISPTEWDIARIYVALKFT
RI*
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mRNA from alignment at chr5:425687..427795+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G01510.1 ID=NO05G01510.1|Name=NO05G01510.1|organism=Nannochloropsis oceanica|type=mRNA|length=2109bp|location=Sequence derived from alignment at chr5:425687..427795+ (Nannochloropsis oceanica)
ATGGCGACTGTCCCCAGCGCCCCCACGCCCACCATTGTTGACCAGCTGAT
TAAAAAAGGGGCCATGCTGCACAAGCTCTCCGTGGTGGACGACAAGAACA
ACGTCAGCTTGCTGGGCACCTTCCTGGACGACGCCCACGGCCCCCCAAGC
CAGTCGATCCTCAATCACCTTATCTGCCGGAACGAATACGAAAAAAACTT
ACCCCTCGTCACCTCTCTCGACTCATTTGCCCTCATCGCCTACTCAAAAG
AAAAAGACTATCGGCGCACCTCTGACTTTGTCGGGTACTTGCAAGGCCGA
AAAAAGGCAGCCAAAGTCTTCGTCGATAAGAGCGGTACTGGAGGCTACCT
CTATCCCGGTCCCTCCCTTACCACTCCCGATGGCATCCCCTGCCTCCGTT
GCTACTACGAGTCAGGCCGTTCCCGCAACATCAACAGCAGCAGCACCAAC
AAGAAACGCCTTGCCTCCCCCTCCATGGACGGACTTCCTGCAGTTCCCAT
CCCCACGGGCGCCTCGGTTGCGAAGCGTGCCCGAACGGCGGGCCGTATGC
CACATTTTGAATATATACCTCCAGACCCCATTTCCCCCTCCAACCTACCT
CTCTCTTTCCCCTCCTCATCCTCTCCAACAATAAGCGGGGAAGAAGGTCC
TGTATATTTCCTAGGGCGAGAAGGCGAAAATGGCTCCGTCTCCACCTCCT
TCACCTCCACCAATCTTTTCCCCCCACTACTCGACCCTTCTCAATTCCCT
TGTAGTCAAGACCCGCGTTTCAAGTACGTGCCACCCACGCCAATGAAAGG
ACAGATTCCGCCTCCTTTCTACCACGATCCCGATGCTTGTCCTGTCATCG
AAGGACTTACCCTCACCCCCGACCAAGCCGCCCTCGCTTCCTCAGCAGTG
GCGGCAGCAGCAGCAGTAACACGGCTGCCGCCATCACCTGGTGCAATACC
AGGAAGAGGAGGAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGACGGG
GGGGAGCAGCGTGGGGAAAAGATCAAAAGGTGGCCGAGGGTTTTTATAAT
CAGTTAAAGCGTGAGAAGGGCACGAGGAATCAGAGCCTTGTCTTCCACCT
CCGCAAGCTCAACAACTGGGTGAAGGCCCAACTCATCAATTCCTTGAAGC
CCGCACCTGTCAAGAAAGGTAAGGGAGGGGCGGGGAGGGAGCTGGAGGTT
TTGGACCTGGCATGTGGGAAGGGCGGCGATTTCACTAAGTGGAGGGAGGT
GAGTCGTCGTTACCCCATTGCCCGATATGTTGGTGTGGACATCGCAAAGA
GTTCGTTGGTTGACGCCATTGGCAGGTATCATCAGGATAACCATATAAGA
GGGGCCCTGGGGTCAACTTTGACGTTGGCCTGTGCGGACTTGGGAGGGAC
AGATCTAGTCGAGGACGAGGTGGAGGTGTGGGAGGCGACGGAGGATAAAT
GGGACAAGCGGCCACTGCTGGATGAGGATGACACATTTGATTGCATTACG
ATGCAGTTTGCCTTGCATTACATGTTTGAGACGGAGGGGCGGGCGAGAAA
GTTTCTGCAGGTGGTGGCGACGCATTTGAGGAAGGGGGGGAGTTTCATCG
CGACTACTGTTGATGCCAGAGTGGTGGTGGAGATGTTGGTCGGTTTGGGG
AGGAGGGAAGGAGGAAAAGGGGGGGAATGGGTGGCACGATTGGTGGATGA
GAAGAAGAGGGAACTGTGTCGGTTGCAGGTGGATGACGCGACGTATCAGC
AGTTATTGAGGCCGGCGAGAAGAGGAGGTGAAGGAGGGAAGGAGGAAGAA
AAGGAAACGCCCTTTTGTGGGTTAAGGTACAAGTTTTTGTTGAGAGATGG
GTTGGAGGAAAATGGAGCGGCGGATGCTGTCAATGCACCGGAATGGATGA
TCCCGTTACCATTTTTAGAGGCGGCTGCGAAGGAATATGGATTAAAGTTG
GAAAAGGCGCAGAATTTTCATGAGTTGGTGGAGGAGCACAGAGCACATAT
TGATGGCGGACGGGCGGGGATACGTTGGGTGAATTATCAGGGGAGTATAA
GTCCGACGGAGTGGGACATTGCGCGTATTTACGTGGCCTTGAAATTCACG
AGGATATGA
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Coding sequence (CDS) from alignment at chr5:425687..427795+

>NO05G01510.1 ID=NO05G01510.1|Name=NO05G01510.1|organism=Nannochloropsis oceanica|type=CDS|length=2109bp|location=Sequence derived from alignment at chr5:425687..427795+ (Nannochloropsis oceanica)
ATGGCGACTGTCCCCAGCGCCCCCACGCCCACCATTGTTGACCAGCTGAT
TAAAAAAGGGGCCATGCTGCACAAGCTCTCCGTGGTGGACGACAAGAACA
ACGTCAGCTTGCTGGGCACCTTCCTGGACGACGCCCACGGCCCCCCAAGC
CAGTCGATCCTCAATCACCTTATCTGCCGGAACGAATACGAAAAAAACTT
ACCCCTCGTCACCTCTCTCGACTCATTTGCCCTCATCGCCTACTCAAAAG
AAAAAGACTATCGGCGCACCTCTGACTTTGTCGGGTACTTGCAAGGCCGA
AAAAAGGCAGCCAAAGTCTTCGTCGATAAGAGCGGTACTGGAGGCTACCT
CTATCCCGGTCCCTCCCTTACCACTCCCGATGGCATCCCCTGCCTCCGTT
GCTACTACGAGTCAGGCCGTTCCCGCAACATCAACAGCAGCAGCACCAAC
AAGAAACGCCTTGCCTCCCCCTCCATGGACGGACTTCCTGCAGTTCCCAT
CCCCACGGGCGCCTCGGTTGCGAAGCGTGCCCGAACGGCGGGCCGTATGC
CACATTTTGAATATATACCTCCAGACCCCATTTCCCCCTCCAACCTACCT
CTCTCTTTCCCCTCCTCATCCTCTCCAACAATAAGCGGGGAAGAAGGTCC
TGTATATTTCCTAGGGCGAGAAGGCGAAAATGGCTCCGTCTCCACCTCCT
TCACCTCCACCAATCTTTTCCCCCCACTACTCGACCCTTCTCAATTCCCT
TGTAGTCAAGACCCGCGTTTCAAGTACGTGCCACCCACGCCAATGAAAGG
ACAGATTCCGCCTCCTTTCTACCACGATCCCGATGCTTGTCCTGTCATCG
AAGGACTTACCCTCACCCCCGACCAAGCCGCCCTCGCTTCCTCAGCAGTG
GCGGCAGCAGCAGCAGTAACACGGCTGCCGCCATCACCTGGTGCAATACC
AGGAAGAGGAGGAGAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGACGGG
GGGGAGCAGCGTGGGGAAAAGATCAAAAGGTGGCCGAGGGTTTTTATAAT
CAGTTAAAGCGTGAGAAGGGCACGAGGAATCAGAGCCTTGTCTTCCACCT
CCGCAAGCTCAACAACTGGGTGAAGGCCCAACTCATCAATTCCTTGAAGC
CCGCACCTGTCAAGAAAGGTAAGGGAGGGGCGGGGAGGGAGCTGGAGGTT
TTGGACCTGGCATGTGGGAAGGGCGGCGATTTCACTAAGTGGAGGGAGGT
GAGTCGTCGTTACCCCATTGCCCGATATGTTGGTGTGGACATCGCAAAGA
GTTCGTTGGTTGACGCCATTGGCAGGTATCATCAGGATAACCATATAAGA
GGGGCCCTGGGGTCAACTTTGACGTTGGCCTGTGCGGACTTGGGAGGGAC
AGATCTAGTCGAGGACGAGGTGGAGGTGTGGGAGGCGACGGAGGATAAAT
GGGACAAGCGGCCACTGCTGGATGAGGATGACACATTTGATTGCATTACG
ATGCAGTTTGCCTTGCATTACATGTTTGAGACGGAGGGGCGGGCGAGAAA
GTTTCTGCAGGTGGTGGCGACGCATTTGAGGAAGGGGGGGAGTTTCATCG
CGACTACTGTTGATGCCAGAGTGGTGGTGGAGATGTTGGTCGGTTTGGGG
AGGAGGGAAGGAGGAAAAGGGGGGGAATGGGTGGCACGATTGGTGGATGA
GAAGAAGAGGGAACTGTGTCGGTTGCAGGTGGATGACGCGACGTATCAGC
AGTTATTGAGGCCGGCGAGAAGAGGAGGTGAAGGAGGGAAGGAGGAAGAA
AAGGAAACGCCCTTTTGTGGGTTAAGGTACAAGTTTTTGTTGAGAGATGG
GTTGGAGGAAAATGGAGCGGCGGATGCTGTCAATGCACCGGAATGGATGA
TCCCGTTACCATTTTTAGAGGCGGCTGCGAAGGAATATGGATTAAAGTTG
GAAAAGGCGCAGAATTTTCATGAGTTGGTGGAGGAGCACAGAGCACATAT
TGATGGCGGACGGGCGGGGATACGTTGGGTGAATTATCAGGGGAGTATAA
GTCCGACGGAGTGGGACATTGCGCGTATTTACGTGGCCTTGAAATTCACG
AGGATATGA
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Synonyms
Publications