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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr5 | genome | chr5:418093..420476 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G01470.1 vs.
Match: EWM28193.1 (fructose- -bisphosphate 2-phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 986.5 bits (2549), Expect = 3.400e-284 Identity = 491/551 (89.11%), Postives = 516/551 (93.65%), Query Frame = 0
Query: 4 SSSSGVTGAASSAIIQHDGARRRVIVLGCAASFIVTFLIRRYRSKDTDSNRKGSGVFKSTSERTFRQYPQNYPTVRPRNGGASGGIGQHTGTAVAAAGGVGPLSSTGLNGTLDFSHPDGPNIGPASDPAWLENHDQQGIPAKTDLLHTGHLKGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQDKYGHKQAAEFFDTSNEEYTSSRMELLACALEDSVGYLNRGGEVAILDGTNVTEARRRLIRERMQREDGYEILWIESICEDPQVIAHNVAQLREASPDYVADHDFERRIAFYKIDYVHVREDEGSYAKVFDAGRKLELNRIHGFLPTKVISFLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIHNETELPHDQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLSYEQMKENFPHEYKNREQDKLRYRYPRGESYMDIISRLESVIFELERQQGPVVIVAHQAVLRCLYAYFLDLPPEEVPYLSIPLHTVIKVTPKAYGCAEKRYKMMV 555
SS+SG GAA+ + QHDG RRRVI+LGCAASF VT+L+RR RSK S KG GVFKSTSERTFR+YPQN P+V PRNG A G G+H GTA AA G VGPL+S+GLN TLDFSHPDGPNIGPASDP WLENHDQ+G+P KTDLLHTGH+KGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQDKYGHKQAAEFFDT+N+EYTSSRMELLACAL+DSVGYLNRGGEVAILDGTNVTEARR IRER+QREDGYEILWIESICEDPQVIAHNVAQLREASPDYVADHDFERRIAFYKIDYVHVRE+EGSYAKVFDAGRKLELNRIHGFLPTK+ISFLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIHNE ELP DQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLSY+Q+++NFP EYK RE DKLRYRYPRGESYMDIISRLESVIFELERQQ PVVIVAHQAVLRCLYAYFLDLPPEEVPYL+IPLHTVIKVTPKAYGCAEKRYKMMV
Sbjct: 2 SSASGAAGAAAM-VAQHDGGRRRVILLGCAASFFVTYLLRRSRSKAVGSG-KGGGVFKSTSERTFRRYPQNSPSVGPRNG-APGEEGRHAGTAAAAGGRVGPLTSSGLNNTLDFSHPDGPNIGPASDPGWLENHDQEGLPVKTDLLHTGHMKGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQDKYGHKQAAEFFDTANKEYTSSRMELLACALDDSVGYLNRGGEVAILDGTNVTEARRNAIRERLQREDGYEILWIESICEDPQVIAHNVAQLREASPDYVADHDFERRIAFYKIDYVHVREEEGSYAKVFDAGRKLELNRIHGFLPTKIISFLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIHNEPELPPDQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLSYDQIRDNFPQEYKAREVDKLRYRYPRGESYMDIISRLESVIFELERQQAPVVIVAHQAVLRCLYAYFLDLPPEEVPYLAIPLHTVIKVTPKAYGCAEKRYKMMV 549
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G01470.1 ID=NO05G01470.1|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=mRNA|length=2241bp ACAGGGGGAAGGAACCCACCGTAAGAACCTGTACAGTACCCTCACTACCG CTGAGACCGACGTTATTACGAGTCCATGCCTTCCTCGTCCTCTTCCGGCG TCACCGGTGCGGCTTCCTCCGCCATCATACAACATGACGGAGCTCGCCGC CGGGTGATCGTCCTGGGTTGCGCCGCCTCCTTTATCGTCACCTTTCTTAT CCGTCGCTACCGCTCCAAAGACACCGACTCCAACAGAAAAGGCAGTGGCG TCTTCAAATCTACCTCCGAACGCACGTTTCGACAGTATCCCCAAAACTAC CCCACGGTCAGGCCACGGAACGGCGGCGCTTCAGGGGGCATCGGACAACA CACAGGCACTGCCGTCGCCGCAGCAGGAGGGGTAGGGCCCTTGAGTTCCA CAGGGTTAAATGGTACTTTGGACTTTTCGCATCCTGATGGTCCGAATATA GGGCCTGCGTCTGACCCAGCGTGGCTGGAGAATCATGACCAGCAGGGGAT ACCAGCAAAGACGGATTTGCTGCATACGGGACATTTAAAAGGGGGTAAAT TGTTAATTTGTGTGATTGGGCTGCCAGCACGGGGGAAGACGTATATAGCA CGGAAGGTCGCGCGGTATTTGAGGTGGATTAATTATCGGACAAGGGTGTT TTGTCTGGCGAGGTATAGACAGGACAAATACGGGCATAAGCAGGCGGCAG AATTTTTTGATACGAGCAATGAGGAGTATACGTCGTCGAGGATGGAGCTG TTGGCGTGTGCATTGGAGGACTCGGTGGGATATTTGAATCGAGGTGGGGA GGTGGCGATTTTGGATGGGACGAATGTGACTGAGGCGAGGCGGAGGTTGA TTCGGGAGAGGATGCAGAGGGAGGACGGGTATGAGATCTTGTGGATTGAG TCGATCTGCGAGGACCCCCAGGTGATTGCCCATAATGTCGCCCAGCTGAG GGAGGCTAGTCCTGACTATGTTGCGGACCATGATTTTGAGAGGAGGATTG CGTTCTATAAGATTGATTATGTCCATGTCCGGGAGGATGAGGGGAGTTAT GCAAAGGTCTTCGATGCGGGTCGGAAGTTGGAGTTGAACCGCATTCATGG GTTTTTGCCGACCAAAGTTATTTCGTTTCTGATGAATTTGCATATCATGC CTAGGCCGGTTTATTTCACCAGACACGGCGAGTCCATCTTCAATATCCAC GGACTGATAGGCGGCGACTCATCCCTCTCCCCCAAAGGCGAGAAGTTCGC CGACCTCCTTTCTCTCTTTATTCATAATGAAACCGAGCTTCCCCATGACC AGCTAAACGTCTGGACAAGTACCATGAAGCGTGCCCGTGCAACGGCCGCC AAAATTAAATGCGCGCGTTATGTTGAATGGCGTTCTCTGCGAGAGATCGA GGTAGGGGTGTGCGATGGCCTGAGCTACGAACAAATGAAGGAGAACTTTC CGCACGAGTACAAGAACCGCGAGCAGGATAAGCTCCGATATCGGTACCCC CGGGGGGAGAGCTATATGGACATCATTTCGAGGTTGGAGAGTGTGATTTT CGAGCTTGAACGGCAGCAGGGTCCGGTGGTGATTGTCGCCCACCAGGCAG TGCTGAGGTGCTTGTATGCATACTTCCTGGACTTGCCCCCGGAGGAGGTG CCGTACCTGTCTATTCCCTTGCACACGGTGATAAAGGTCACGCCCAAGGC GTATGGATGTGCGGAGAAGCGATATAAGATGATGGTATGAGCGGGAGAGA GGAGAGGAAGGAGGGAAGCGTTTGAGCTTGGAAAGAGGATGAAGGGAGAA TGAAGCAGGGGTCTTCATTAAGCTTGAAGTTGTAAATATAGATAGGTAGG TGCTAGGCAGGTCAATAGAGATTATGCAAGAAGGATATGAAAATGACGTC GTGCTTCGTCTCGTTGCTTCGTCTTGTTTTGTGTGGTAGGGAGGTGATGG GAAGGCTGGTGGAGAAAAAAAAAAGGGGGAGGAGGAGGAGAAAGAGGAGA AGGAGATGAAGGAGAGGGGAGGATGAACTGAGACCAGGGATAAGGAGGAT AAGATAGAGAGTGAGGAAAGAGAGAGTGGGAGGAAACATAAGAGCTTGAG AAGGCCTGTATCTGAATGGAGGGAAAGCGAGGAAATAGCAGAAAAAAGGA TGAGCGGCAAGCATACAGCAATTGCAATGGCAGGATAGATAGACTGCCAT CCATGAAATCGACTTAAAAAGAAAGAAAGAAAAACACTCCT back to topprotein sequence of NO05G01470.1 >NO05G01470.1-protein ID=NO05G01470.1-protein|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp MPSSSSSGVTGAASSAIIQHDGARRRVIVLGCAASFIVTFLIRRYRSKDT DSNRKGSGVFKSTSERTFRQYPQNYPTVRPRNGGASGGIGQHTGTAVAAA GGVGPLSSTGLNGTLDFSHPDGPNIGPASDPAWLENHDQQGIPAKTDLLH TGHLKGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQD KYGHKQAAEFFDTSNEEYTSSRMELLACALEDSVGYLNRGGEVAILDGTN VTEARRRLIRERMQREDGYEILWIESICEDPQVIAHNVAQLREASPDYVA DHDFERRIAFYKIDYVHVREDEGSYAKVFDAGRKLELNRIHGFLPTKVIS FLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIH NETELPHDQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLS YEQMKENFPHEYKNREQDKLRYRYPRGESYMDIISRLESVIFELERQQGP VVIVAHQAVLRCLYAYFLDLPPEEVPYLSIPLHTVIKVTPKAYGCAEKRY KMMV* back to topmRNA from alignment at chr5:418093..420476+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G01470.1 ID=NO05G01470.1|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=mRNA|length=2384bp|location=Sequence derived from alignment at chr5:418093..420476+ (Nannochloropsis oceanica) ACAGGGGGAAGGAACCCACCGTAAGAACCTGTACAGTACCCTCACTACCG
CTGAGACCGACGTTATTACGAGTCCATGCCTTCCTCGTCCTCTTCCGGCG
TCACCGGTGCGGCTTCCTCCGCCATCATACAACATGACGGAGCTCGCCGC
CGGGTGATCGTCCTGGGTTGCGCCGCCTCCTTTATCGTCACCTTTCTTAT
CCGTCGCTACCGCTCCAAAGACACCGACTCCAACAGAAAAGGCAGTGGCG
TCTTCAAATCTACCTCCGAACGCACGTTTCGACAGTATCCCCAAAACTAC
CCCACGGTCAGGCCACGGAACGGCGGCGCTTCAGGGGGCATCGGACAACA
CACAGGCACTGCCGTCGCCGCAGCAGGAGGGGTAGGGCCCTTGAGTTCCA
CAGGGTTAAATGGTACTTTGGACTTTTCGCATCCTGATGGTCCGAATATA
GGGCCTGCGTCTGACCCAGCGTGGCTGGAGAATCATGACCAGCAGGGGAT
ACCAGCAAAGACGGATTTGCTGCATACGGGACATTTAAAAGGGGGTAAAT
TGTTAATTTGTGTGATTGGGCTGCCAGCACGGGGGAAGACGTATATAGCA
CGGAAGGTCGCGCGGTATTTGAGGTGGATTAATTATCGGACAAGGGTGTT
TTGTCTGGCGAGGTATAGACAGGACAAATACGGGCATAAGCAGGCGGCAG
AATTTTTTGATACGAGCAATGAGGAGTATACGTCGTCGAGGATGGAGCTG
TTGGCGTGTGCATTGGAGGACTCGGTGGGATATTTGAATCGAGGTGGGGA
GGTGGCGATTTTGGATGGGACGAATGTGACTGAGGCGAGGCGGAGGTTGA
TTCGGGAGAGGATGCAGAGGGAGGACGGGTATGAGATCTTGTGGATTGAG
TCGATCTGCGAGGACCCCCAGGTGATTGCCCATAATGTCGCCCAGCTGAG
GGAGGCTAGTCCTGACTATGTTGCGGACCATGATTTTGAGAGGAGGATTG
CGTTCTATAAGATTGATTATGTCCATGTCCGGGAGGATGAGGGGAGTTAT
GCAAAGGTCTTCGATGCGGGTCGGAAGTTGGAGTTGAACCGCATTCATGG
GTTTTTGCCGACCAAAGTTATTTCGTTTCTGATGAATTTGCATATCATGC
CTAGGCCGGTTTATTTCACCAGGTGAGGAAAGGAGGGAGGGAGGGAAAGG
GCTCGATGTCGTATCGTCGGTCTCATTTCTTCCGTGCTGCAGTCGTCGAC
ACTCATGCACGAACTCCCCTCCTTCCCTCCTTCTCTCCCCTCTCTTGTTT
TCCTCGGCCCGTTAGACACGGCGAGTCCATCTTCAATATCCACGGACTGA
TAGGCGGCGACTCATCCCTCTCCCCCAAAGGCGAGAAGTTCGCCGACCTC
CTTTCTCTCTTTATTCATAATGAAACCGAGCTTCCCCATGACCAGCTAAA
CGTCTGGACAAGTACCATGAAGCGTGCCCGTGCAACGGCCGCCAAAATTA
AATGCGCGCGTTATGTTGAATGGCGTTCTCTGCGAGAGATCGAGGTAGGG
GTGTGCGATGGCCTGAGCTACGAACAAATGAAGGAGAACTTTCCGCACGA
GTACAAGAACCGCGAGCAGGATAAGCTCCGATATCGGTACCCCCGGGGGG
AGAGCTATATGGACATCATTTCGAGGTTGGAGAGTGTGATTTTCGAGCTT
GAACGGCAGCAGGGTCCGGTGGTGATTGTCGCCCACCAGGCAGTGCTGAG
GTGCTTGTATGCATACTTCCTGGACTTGCCCCCGGAGGAGGTGCCGTACC
TGTCTATTCCCTTGCACACGGTGATAAAGGTCACGCCCAAGGCGTATGGA
TGTGCGGAGAAGCGATATAAGATGATGGTATGAGCGGGAGAGAGGAGAGG
AAGGAGGGAAGCGTTTGAGCTTGGAAAGAGGATGAAGGGAGAATGAAGCA
GGGGTCTTCATTAAGCTTGAAGTTGTAAATATAGATAGGTAGGTGCTAGG
CAGGTCAATAGAGATTATGCAAGAAGGATATGAAAATGACGTCGTGCTTC
GTCTCGTTGCTTCGTCTTGTTTTGTGTGGTAGGGAGGTGATGGGAAGGCT
GGTGGAGAAAAAAAAAAGGGGGAGGAGGAGGAGAAAGAGGAGAAGGAGAT
GAAGGAGAGGGGAGGATGAACTGAGACCAGGGATAAGGAGGATAAGATAG
AGAGTGAGGAAAGAGAGAGTGGGAGGAAACATAAGAGCTTGAGAAGGCCT
GTATCTGAATGGAGGGAAAGCGAGGAAATAGCAGAAAAAAGGATGAGCGG
CAAGCATACAGCAATTGCAATGGCAGGATAGATAGACTGCCATCCATGAA
ATCGACTTAAAAAGAAAGAAAGAAAAACACTCCT back to topCoding sequence (CDS) from alignment at chr5:418093..420476+ >NO05G01470.1 ID=NO05G01470.1|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=CDS|length=1665bp|location=Sequence derived from alignment at chr5:418093..420476+ (Nannochloropsis oceanica) ATGCCTTCCTCGTCCTCTTCCGGCGTCACCGGTGCGGCTTCCTCCGCCAT CATACAACATGACGGAGCTCGCCGCCGGGTGATCGTCCTGGGTTGCGCCG CCTCCTTTATCGTCACCTTTCTTATCCGTCGCTACCGCTCCAAAGACACC GACTCCAACAGAAAAGGCAGTGGCGTCTTCAAATCTACCTCCGAACGCAC GTTTCGACAGTATCCCCAAAACTACCCCACGGTCAGGCCACGGAACGGCG GCGCTTCAGGGGGCATCGGACAACACACAGGCACTGCCGTCGCCGCAGCA GGAGGGGTAGGGCCCTTGAGTTCCACAGGGTTAAATGGTACTTTGGACTT TTCGCATCCTGATGGTCCGAATATAGGGCCTGCGTCTGACCCAGCGTGGC TGGAGAATCATGACCAGCAGGGGATACCAGCAAAGACGGATTTGCTGCAT ACGGGACATTTAAAAGGGGGTAAATTGTTAATTTGTGTGATTGGGCTGCC AGCACGGGGGAAGACGTATATAGCACGGAAGGTCGCGCGGTATTTGAGGT GGATTAATTATCGGACAAGGGTGTTTTGTCTGGCGAGGTATAGACAGGAC AAATACGGGCATAAGCAGGCGGCAGAATTTTTTGATACGAGCAATGAGGA GTATACGTCGTCGAGGATGGAGCTGTTGGCGTGTGCATTGGAGGACTCGG TGGGATATTTGAATCGAGGTGGGGAGGTGGCGATTTTGGATGGGACGAAT GTGACTGAGGCGAGGCGGAGGTTGATTCGGGAGAGGATGCAGAGGGAGGA CGGGTATGAGATCTTGTGGATTGAGTCGATCTGCGAGGACCCCCAGGTGA TTGCCCATAATGTCGCCCAGCTGAGGGAGGCTAGTCCTGACTATGTTGCG GACCATGATTTTGAGAGGAGGATTGCGTTCTATAAGATTGATTATGTCCA TGTCCGGGAGGATGAGGGGAGTTATGCAAAGGTCTTCGATGCGGGTCGGA AGTTGGAGTTGAACCGCATTCATGGGTTTTTGCCGACCAAAGTTATTTCG TTTCTGATGAATTTGCATATCATGCCTAGGCCGGTTTATTTCACCAGACA CGGCGAGTCCATCTTCAATATCCACGGACTGATAGGCGGCGACTCATCCC TCTCCCCCAAAGGCGAGAAGTTCGCCGACCTCCTTTCTCTCTTTATTCAT AATGAAACCGAGCTTCCCCATGACCAGCTAAACGTCTGGACAAGTACCAT GAAGCGTGCCCGTGCAACGGCCGCCAAAATTAAATGCGCGCGTTATGTTG AATGGCGTTCTCTGCGAGAGATCGAGGTAGGGGTGTGCGATGGCCTGAGC TACGAACAAATGAAGGAGAACTTTCCGCACGAGTACAAGAACCGCGAGCA GGATAAGCTCCGATATCGGTACCCCCGGGGGGAGAGCTATATGGACATCA TTTCGAGGTTGGAGAGTGTGATTTTCGAGCTTGAACGGCAGCAGGGTCCG GTGGTGATTGTCGCCCACCAGGCAGTGCTGAGGTGCTTGTATGCATACTT CCTGGACTTGCCCCCGGAGGAGGTGCCGTACCTGTCTATTCCCTTGCACA CGGTGATAAAGGTCACGCCCAAGGCGTATGGATGTGCGGAGAAGCGATAT AAGATGATGGTATGA back to top
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