NO05G01470.1, NO05G01470.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G01470.1
Unique NameNO05G01470.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2241
Alignment locationchr5:418093..420476 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:418093..420476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G01470.1 vs.
Match: EWM28193.1 (fructose- -bisphosphate 2-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 986.5 bits (2549), Expect = 3.400e-284
Identity = 491/551 (89.11%), Postives = 516/551 (93.65%), Query Frame = 0
Query:    4 SSSSGVTGAASSAIIQHDGARRRVIVLGCAASFIVTFLIRRYRSKDTDSNRKGSGVFKSTSERTFRQYPQNYPTVRPRNGGASGGIGQHTGTAVAAAGGVGPLSSTGLNGTLDFSHPDGPNIGPASDPAWLENHDQQGIPAKTDLLHTGHLKGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQDKYGHKQAAEFFDTSNEEYTSSRMELLACALEDSVGYLNRGGEVAILDGTNVTEARRRLIRERMQREDGYEILWIESICEDPQVIAHNVAQLREASPDYVADHDFERRIAFYKIDYVHVREDEGSYAKVFDAGRKLELNRIHGFLPTKVISFLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIHNETELPHDQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLSYEQMKENFPHEYKNREQDKLRYRYPRGESYMDIISRLESVIFELERQQGPVVIVAHQAVLRCLYAYFLDLPPEEVPYLSIPLHTVIKVTPKAYGCAEKRYKMMV 555
            SS+SG  GAA+  + QHDG RRRVI+LGCAASF VT+L+RR RSK   S  KG GVFKSTSERTFR+YPQN P+V PRNG A G  G+H GTA AA G VGPL+S+GLN TLDFSHPDGPNIGPASDP WLENHDQ+G+P KTDLLHTGH+KGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQDKYGHKQAAEFFDT+N+EYTSSRMELLACAL+DSVGYLNRGGEVAILDGTNVTEARR  IRER+QREDGYEILWIESICEDPQVIAHNVAQLREASPDYVADHDFERRIAFYKIDYVHVRE+EGSYAKVFDAGRKLELNRIHGFLPTK+ISFLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIHNE ELP DQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLSY+Q+++NFP EYK RE DKLRYRYPRGESYMDIISRLESVIFELERQQ PVVIVAHQAVLRCLYAYFLDLPPEEVPYL+IPLHTVIKVTPKAYGCAEKRYKMMV
Sbjct:    2 SSASGAAGAAAM-VAQHDGGRRRVILLGCAASFFVTYLLRRSRSKAVGSG-KGGGVFKSTSERTFRRYPQNSPSVGPRNG-APGEEGRHAGTAAAAGGRVGPLTSSGLNNTLDFSHPDGPNIGPASDPGWLENHDQEGLPVKTDLLHTGHMKGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQDKYGHKQAAEFFDTANKEYTSSRMELLACALDDSVGYLNRGGEVAILDGTNVTEARRNAIRERLQREDGYEILWIESICEDPQVIAHNVAQLREASPDYVADHDFERRIAFYKIDYVHVREEEGSYAKVFDAGRKLELNRIHGFLPTKIISFLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIHNEPELPPDQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLSYDQIRDNFPQEYKAREVDKLRYRYPRGESYMDIISRLESVIFELERQQAPVVIVAHQAVLRCLYAYFLDLPPEEVPYLAIPLHTVIKVTPKAYGCAEKRYKMMV 549          
The following BLAST results are available for this feature:
BLAST of NO05G01470.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28193.13.400e-28489.11fructose- -bisphosphate 2-phosphatase [Nannochloro... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01470NO05G01470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G01470.1NO05G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G01470.1.cds1NO05G01470.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G01470.1.cds2NO05G01470.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G01470.1 ID=NO05G01470.1|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=mRNA|length=2241bp
ACAGGGGGAAGGAACCCACCGTAAGAACCTGTACAGTACCCTCACTACCG
CTGAGACCGACGTTATTACGAGTCCATGCCTTCCTCGTCCTCTTCCGGCG
TCACCGGTGCGGCTTCCTCCGCCATCATACAACATGACGGAGCTCGCCGC
CGGGTGATCGTCCTGGGTTGCGCCGCCTCCTTTATCGTCACCTTTCTTAT
CCGTCGCTACCGCTCCAAAGACACCGACTCCAACAGAAAAGGCAGTGGCG
TCTTCAAATCTACCTCCGAACGCACGTTTCGACAGTATCCCCAAAACTAC
CCCACGGTCAGGCCACGGAACGGCGGCGCTTCAGGGGGCATCGGACAACA
CACAGGCACTGCCGTCGCCGCAGCAGGAGGGGTAGGGCCCTTGAGTTCCA
CAGGGTTAAATGGTACTTTGGACTTTTCGCATCCTGATGGTCCGAATATA
GGGCCTGCGTCTGACCCAGCGTGGCTGGAGAATCATGACCAGCAGGGGAT
ACCAGCAAAGACGGATTTGCTGCATACGGGACATTTAAAAGGGGGTAAAT
TGTTAATTTGTGTGATTGGGCTGCCAGCACGGGGGAAGACGTATATAGCA
CGGAAGGTCGCGCGGTATTTGAGGTGGATTAATTATCGGACAAGGGTGTT
TTGTCTGGCGAGGTATAGACAGGACAAATACGGGCATAAGCAGGCGGCAG
AATTTTTTGATACGAGCAATGAGGAGTATACGTCGTCGAGGATGGAGCTG
TTGGCGTGTGCATTGGAGGACTCGGTGGGATATTTGAATCGAGGTGGGGA
GGTGGCGATTTTGGATGGGACGAATGTGACTGAGGCGAGGCGGAGGTTGA
TTCGGGAGAGGATGCAGAGGGAGGACGGGTATGAGATCTTGTGGATTGAG
TCGATCTGCGAGGACCCCCAGGTGATTGCCCATAATGTCGCCCAGCTGAG
GGAGGCTAGTCCTGACTATGTTGCGGACCATGATTTTGAGAGGAGGATTG
CGTTCTATAAGATTGATTATGTCCATGTCCGGGAGGATGAGGGGAGTTAT
GCAAAGGTCTTCGATGCGGGTCGGAAGTTGGAGTTGAACCGCATTCATGG
GTTTTTGCCGACCAAAGTTATTTCGTTTCTGATGAATTTGCATATCATGC
CTAGGCCGGTTTATTTCACCAGACACGGCGAGTCCATCTTCAATATCCAC
GGACTGATAGGCGGCGACTCATCCCTCTCCCCCAAAGGCGAGAAGTTCGC
CGACCTCCTTTCTCTCTTTATTCATAATGAAACCGAGCTTCCCCATGACC
AGCTAAACGTCTGGACAAGTACCATGAAGCGTGCCCGTGCAACGGCCGCC
AAAATTAAATGCGCGCGTTATGTTGAATGGCGTTCTCTGCGAGAGATCGA
GGTAGGGGTGTGCGATGGCCTGAGCTACGAACAAATGAAGGAGAACTTTC
CGCACGAGTACAAGAACCGCGAGCAGGATAAGCTCCGATATCGGTACCCC
CGGGGGGAGAGCTATATGGACATCATTTCGAGGTTGGAGAGTGTGATTTT
CGAGCTTGAACGGCAGCAGGGTCCGGTGGTGATTGTCGCCCACCAGGCAG
TGCTGAGGTGCTTGTATGCATACTTCCTGGACTTGCCCCCGGAGGAGGTG
CCGTACCTGTCTATTCCCTTGCACACGGTGATAAAGGTCACGCCCAAGGC
GTATGGATGTGCGGAGAAGCGATATAAGATGATGGTATGAGCGGGAGAGA
GGAGAGGAAGGAGGGAAGCGTTTGAGCTTGGAAAGAGGATGAAGGGAGAA
TGAAGCAGGGGTCTTCATTAAGCTTGAAGTTGTAAATATAGATAGGTAGG
TGCTAGGCAGGTCAATAGAGATTATGCAAGAAGGATATGAAAATGACGTC
GTGCTTCGTCTCGTTGCTTCGTCTTGTTTTGTGTGGTAGGGAGGTGATGG
GAAGGCTGGTGGAGAAAAAAAAAAGGGGGAGGAGGAGGAGAAAGAGGAGA
AGGAGATGAAGGAGAGGGGAGGATGAACTGAGACCAGGGATAAGGAGGAT
AAGATAGAGAGTGAGGAAAGAGAGAGTGGGAGGAAACATAAGAGCTTGAG
AAGGCCTGTATCTGAATGGAGGGAAAGCGAGGAAATAGCAGAAAAAAGGA
TGAGCGGCAAGCATACAGCAATTGCAATGGCAGGATAGATAGACTGCCAT
CCATGAAATCGACTTAAAAAGAAAGAAAGAAAAACACTCCT
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protein sequence of NO05G01470.1

>NO05G01470.1-protein ID=NO05G01470.1-protein|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MPSSSSSGVTGAASSAIIQHDGARRRVIVLGCAASFIVTFLIRRYRSKDT
DSNRKGSGVFKSTSERTFRQYPQNYPTVRPRNGGASGGIGQHTGTAVAAA
GGVGPLSSTGLNGTLDFSHPDGPNIGPASDPAWLENHDQQGIPAKTDLLH
TGHLKGGKLLICVIGLPARGKTYIARKVARYLRWINYRTRVFCLARYRQD
KYGHKQAAEFFDTSNEEYTSSRMELLACALEDSVGYLNRGGEVAILDGTN
VTEARRRLIRERMQREDGYEILWIESICEDPQVIAHNVAQLREASPDYVA
DHDFERRIAFYKIDYVHVREDEGSYAKVFDAGRKLELNRIHGFLPTKVIS
FLMNLHIMPRPVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIH
NETELPHDQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLS
YEQMKENFPHEYKNREQDKLRYRYPRGESYMDIISRLESVIFELERQQGP
VVIVAHQAVLRCLYAYFLDLPPEEVPYLSIPLHTVIKVTPKAYGCAEKRY
KMMV*
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mRNA from alignment at chr5:418093..420476+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G01470.1 ID=NO05G01470.1|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=mRNA|length=2384bp|location=Sequence derived from alignment at chr5:418093..420476+ (Nannochloropsis oceanica)
ACAGGGGGAAGGAACCCACCGTAAGAACCTGTACAGTACCCTCACTACCG CTGAGACCGACGTTATTACGAGTCCATGCCTTCCTCGTCCTCTTCCGGCG TCACCGGTGCGGCTTCCTCCGCCATCATACAACATGACGGAGCTCGCCGC CGGGTGATCGTCCTGGGTTGCGCCGCCTCCTTTATCGTCACCTTTCTTAT CCGTCGCTACCGCTCCAAAGACACCGACTCCAACAGAAAAGGCAGTGGCG TCTTCAAATCTACCTCCGAACGCACGTTTCGACAGTATCCCCAAAACTAC CCCACGGTCAGGCCACGGAACGGCGGCGCTTCAGGGGGCATCGGACAACA CACAGGCACTGCCGTCGCCGCAGCAGGAGGGGTAGGGCCCTTGAGTTCCA CAGGGTTAAATGGTACTTTGGACTTTTCGCATCCTGATGGTCCGAATATA GGGCCTGCGTCTGACCCAGCGTGGCTGGAGAATCATGACCAGCAGGGGAT ACCAGCAAAGACGGATTTGCTGCATACGGGACATTTAAAAGGGGGTAAAT TGTTAATTTGTGTGATTGGGCTGCCAGCACGGGGGAAGACGTATATAGCA CGGAAGGTCGCGCGGTATTTGAGGTGGATTAATTATCGGACAAGGGTGTT TTGTCTGGCGAGGTATAGACAGGACAAATACGGGCATAAGCAGGCGGCAG AATTTTTTGATACGAGCAATGAGGAGTATACGTCGTCGAGGATGGAGCTG TTGGCGTGTGCATTGGAGGACTCGGTGGGATATTTGAATCGAGGTGGGGA GGTGGCGATTTTGGATGGGACGAATGTGACTGAGGCGAGGCGGAGGTTGA TTCGGGAGAGGATGCAGAGGGAGGACGGGTATGAGATCTTGTGGATTGAG TCGATCTGCGAGGACCCCCAGGTGATTGCCCATAATGTCGCCCAGCTGAG GGAGGCTAGTCCTGACTATGTTGCGGACCATGATTTTGAGAGGAGGATTG CGTTCTATAAGATTGATTATGTCCATGTCCGGGAGGATGAGGGGAGTTAT GCAAAGGTCTTCGATGCGGGTCGGAAGTTGGAGTTGAACCGCATTCATGG GTTTTTGCCGACCAAAGTTATTTCGTTTCTGATGAATTTGCATATCATGC CTAGGCCGGTTTATTTCACCAGGTGAGGAAAGGAGGGAGGGAGGGAAAGG GCTCGATGTCGTATCGTCGGTCTCATTTCTTCCGTGCTGCAGTCGTCGAC ACTCATGCACGAACTCCCCTCCTTCCCTCCTTCTCTCCCCTCTCTTGTTT TCCTCGGCCCGTTAGACACGGCGAGTCCATCTTCAATATCCACGGACTGA TAGGCGGCGACTCATCCCTCTCCCCCAAAGGCGAGAAGTTCGCCGACCTC CTTTCTCTCTTTATTCATAATGAAACCGAGCTTCCCCATGACCAGCTAAA CGTCTGGACAAGTACCATGAAGCGTGCCCGTGCAACGGCCGCCAAAATTA AATGCGCGCGTTATGTTGAATGGCGTTCTCTGCGAGAGATCGAGGTAGGG GTGTGCGATGGCCTGAGCTACGAACAAATGAAGGAGAACTTTCCGCACGA GTACAAGAACCGCGAGCAGGATAAGCTCCGATATCGGTACCCCCGGGGGG AGAGCTATATGGACATCATTTCGAGGTTGGAGAGTGTGATTTTCGAGCTT GAACGGCAGCAGGGTCCGGTGGTGATTGTCGCCCACCAGGCAGTGCTGAG GTGCTTGTATGCATACTTCCTGGACTTGCCCCCGGAGGAGGTGCCGTACC TGTCTATTCCCTTGCACACGGTGATAAAGGTCACGCCCAAGGCGTATGGA TGTGCGGAGAAGCGATATAAGATGATGGTATGAGCGGGAGAGAGGAGAGG AAGGAGGGAAGCGTTTGAGCTTGGAAAGAGGATGAAGGGAGAATGAAGCA GGGGTCTTCATTAAGCTTGAAGTTGTAAATATAGATAGGTAGGTGCTAGG CAGGTCAATAGAGATTATGCAAGAAGGATATGAAAATGACGTCGTGCTTC GTCTCGTTGCTTCGTCTTGTTTTGTGTGGTAGGGAGGTGATGGGAAGGCT GGTGGAGAAAAAAAAAAGGGGGAGGAGGAGGAGAAAGAGGAGAAGGAGAT GAAGGAGAGGGGAGGATGAACTGAGACCAGGGATAAGGAGGATAAGATAG AGAGTGAGGAAAGAGAGAGTGGGAGGAAACATAAGAGCTTGAGAAGGCCT GTATCTGAATGGAGGGAAAGCGAGGAAATAGCAGAAAAAAGGATGAGCGG CAAGCATACAGCAATTGCAATGGCAGGATAGATAGACTGCCATCCATGAA ATCGACTTAAAAAGAAAGAAAGAAAAACACTCCT
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Coding sequence (CDS) from alignment at chr5:418093..420476+

>NO05G01470.1 ID=NO05G01470.1|Name=NO05G01470.1|organism=Nannochloropsis oceanica|type=CDS|length=1665bp|location=Sequence derived from alignment at chr5:418093..420476+ (Nannochloropsis oceanica)
ATGCCTTCCTCGTCCTCTTCCGGCGTCACCGGTGCGGCTTCCTCCGCCAT
CATACAACATGACGGAGCTCGCCGCCGGGTGATCGTCCTGGGTTGCGCCG
CCTCCTTTATCGTCACCTTTCTTATCCGTCGCTACCGCTCCAAAGACACC
GACTCCAACAGAAAAGGCAGTGGCGTCTTCAAATCTACCTCCGAACGCAC
GTTTCGACAGTATCCCCAAAACTACCCCACGGTCAGGCCACGGAACGGCG
GCGCTTCAGGGGGCATCGGACAACACACAGGCACTGCCGTCGCCGCAGCA
GGAGGGGTAGGGCCCTTGAGTTCCACAGGGTTAAATGGTACTTTGGACTT
TTCGCATCCTGATGGTCCGAATATAGGGCCTGCGTCTGACCCAGCGTGGC
TGGAGAATCATGACCAGCAGGGGATACCAGCAAAGACGGATTTGCTGCAT
ACGGGACATTTAAAAGGGGGTAAATTGTTAATTTGTGTGATTGGGCTGCC
AGCACGGGGGAAGACGTATATAGCACGGAAGGTCGCGCGGTATTTGAGGT
GGATTAATTATCGGACAAGGGTGTTTTGTCTGGCGAGGTATAGACAGGAC
AAATACGGGCATAAGCAGGCGGCAGAATTTTTTGATACGAGCAATGAGGA
GTATACGTCGTCGAGGATGGAGCTGTTGGCGTGTGCATTGGAGGACTCGG
TGGGATATTTGAATCGAGGTGGGGAGGTGGCGATTTTGGATGGGACGAAT
GTGACTGAGGCGAGGCGGAGGTTGATTCGGGAGAGGATGCAGAGGGAGGA
CGGGTATGAGATCTTGTGGATTGAGTCGATCTGCGAGGACCCCCAGGTGA
TTGCCCATAATGTCGCCCAGCTGAGGGAGGCTAGTCCTGACTATGTTGCG
GACCATGATTTTGAGAGGAGGATTGCGTTCTATAAGATTGATTATGTCCA
TGTCCGGGAGGATGAGGGGAGTTATGCAAAGGTCTTCGATGCGGGTCGGA
AGTTGGAGTTGAACCGCATTCATGGGTTTTTGCCGACCAAAGTTATTTCG
TTTCTGATGAATTTGCATATCATGCCTAGGCCGGTTTATTTCACCAGACA
CGGCGAGTCCATCTTCAATATCCACGGACTGATAGGCGGCGACTCATCCC
TCTCCCCCAAAGGCGAGAAGTTCGCCGACCTCCTTTCTCTCTTTATTCAT
AATGAAACCGAGCTTCCCCATGACCAGCTAAACGTCTGGACAAGTACCAT
GAAGCGTGCCCGTGCAACGGCCGCCAAAATTAAATGCGCGCGTTATGTTG
AATGGCGTTCTCTGCGAGAGATCGAGGTAGGGGTGTGCGATGGCCTGAGC
TACGAACAAATGAAGGAGAACTTTCCGCACGAGTACAAGAACCGCGAGCA
GGATAAGCTCCGATATCGGTACCCCCGGGGGGAGAGCTATATGGACATCA
TTTCGAGGTTGGAGAGTGTGATTTTCGAGCTTGAACGGCAGCAGGGTCCG
GTGGTGATTGTCGCCCACCAGGCAGTGCTGAGGTGCTTGTATGCATACTT
CCTGGACTTGCCCCCGGAGGAGGTGCCGTACCTGTCTATTCCCTTGCACA
CGGTGATAAAGGTCACGCCCAAGGCGTATGGATGTGCGGAGAAGCGATAT
AAGATGATGGTATGA
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Synonyms
Publications