NO05G01310.1, NO05G01310.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G01310.1
Unique Name	NO05G01310.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4107
Alignment location	chr5:373347..377453 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:373347..377453 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO05G01310.1 vs.
Match: EWM28211.1 (atp binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1646.7 bits (4263), Expect = 0.000e+0
Identity = 902/1360 (66.32%), Postives = 1026/1360 (75.44%), Query Frame = 0

Query:   30 TSEDYLSSKLLLALLYLAVSTQAFLLPRALPPCQRPLLNFALAATKEGAAAPSWFGEDMWKSNDVTTAARTEFAPSSPSSSAPQFSTSPGRRRSSGKGGNKKEWERSAPEEFLLILTSLRAHYSGQQQQQQQQQQQGEEMEEEEEEVAKLSEDDDGEAEIDIGHVINLVRALANRQWQQAEESAALLCHSQLLDTVLSRMVVYAATQRNEPDLALEILGGMREKRIDVDAFMASLVAKAAATDRRWMPVIEVIRAQLSTNPGGSLTMPAVMKGRRHEGFTQALASTIERGKFYSSSFLVDALLQFRMVDLFTAKVAVKFYRFSRTPARGLPWIATARAIGLIPDADLDFEVGRMYKSLGMWREAVALLNEMVEKGRSVEDEHVGVVLSACHQAGEWGECMEVLERMHGWGLRVGRVSYLIVLRLLLEKRRLDQVRTVLGQMQKQGTPLDAETARLVLFTLAKRGPVYSSMEFLKLMPAWGVEPDLVTYTAVLRACARFQEPDRALEVLKIMEGKGMTVDVLACVTVMEALSGASRWDEAFGLFDSCRAGGLRPDIKCWTQVLHQATQAGRWDLFPTYLHAAVGEARTHQTGLDLRFFATVINACAEANRTDEALAVLASVRSYGLVPNVVCYSAAAKSCLARNRWRDALGLLEEANEQGIPTDATMYRTVLRCCWQARQWQSVLKLYGEMLERGLEVDGQMYTQLMDVLARAGQAELAADLLQEMVANGVIPVDRTLSAFFQCWYQKGEYEEAWRRVGRVARWEEEDEEEEDYEIMGTF-----------AAGGAASGKRSNIQPLL--QPGLGTFADLMNVCARREDWEEVLRLHERMKDMGLPTTAMRAPHLVARAYAEMGRWEEARRFLKEGI-EGVA-------------STDIAGAPAAGAAAGHSTMAWGKAYGALLTMCSKRIEPTRALNLLEEMEMREIAPDAEAYHAVMDACAQSGMEGEVRTVFEKMRGRGDIIPSVESFTIMLELCAREGEKGEEALRLMEDLEGLGLTPDMLCFNAAMEACREASLGERGKEGGRFRAAMRKWRDLEVMHTYNSEIAVLATRKGGFDDGASATALRYLKEMRDNGIPRDADSFNMALEACARAGDLTGVREVFAELQVERTAK-EGVEVKPDIFSYITMANALVGEGQGVEAMALLNYLVGLASDDDGAGTVAAAAVGST-TTTMAAAGAANKEIK--RGKGRVGPGKQSVSRTSKRIDKSFTSQTAP-PSLPTSIL--TSPLPPSS----ANVGIRIKTRWPAYYRFLWPRTAKTLSKTIITLASSGPPSQQATRCADIGRLLQFLRTHVPIFNTQAVAEQLVGRGMCSTEHIKTLTGDALAVRWRK 1352
            T++ +L+  L+  L YL  +  AF  P A P   R  L    A       A S  GE++WKS   TT+A      SS   +A  FS SP RRRS     +KKEWERSAPEEFLLILT LRA                    EE    A L    D E E DIGHVI LVRALANRQW+QAEESAALLC S LLDTVLSRMVVYAATQRNEPDLALEILGGMREKRIDVDAFMASLVAKAAATDRRWMPV+EVIRAQLS+NPGG L MP   +GRRH GFTQALASTIERGKFYSSSFLVDALLQFRMVDLFTAKVA+KFYRFSRTPARGLPWI TARAIGLIPDADLDFEVGR+YKSLGMWREAVALL+EMVE+ R+VEDEHVGVVLSACHQAGEW EC+  L +M  WGL VGRVSYLIVLRLLLEKRRLDQVR+VL QM+ QG+PLDAETARL LFTLAKRGPVYSS+EFLKLMP +GVEPDLV+YTAV+RACARFQ+PD ALEVL +M   GM  DVLAC T M+ALSGA+RWDEAF LFD CR+ GLRPDIKCWTQVL  ATQAGRWDLFP YL AAVGEAR H+TGLDLRFFATVINACAE NRTDEALAVLASVRSYGL+PNVVC++AAAK+CLAR RWRDALGLLEEA ++G+P DAT+YRTVL CCW+ARQWQSVLKLYGEMLERGLEVD +MYT LMD LA AGQ+ELAA++LQ+MVANG+ PVD T SAFFQ WY KGEY   W+ +  + RWE+E   + +   M              +A G+ +G R   +  L   PG  T ADLM+VCARREDW EVL L  R+ DMGLP TA RAPHLV RAYAE+GRW EA++FL + + +GV+             ++D A    A   +   +++W + YGALLT+CSKRIEP RAL LL++ME +++APDAEAYHAVMDACAQ+GM+GEVR VFEK+R R D++P VESFTIML+LCAREG KGEEALRLM+DLEGLGLTPDMLCFNAAMEACREAS+ E     GR+R AMRKWRD+EVMHTYNSE+AVLATRKGG D  AS+TALRYL+EM+ NGIPRD DSFNMALEACAR G+L   R VF ELQ   T + +G   +PDIFSYIT+ANAL  +G+  EAMA LN++VGLA D+      A A VG+    T     A  K I+      R+G  K S SR    I  +  +   P PS P   L       PSS    ++  IR KTRWPAYYR LWP+T KTLSK I+ LA    P +QATRCADIG+LL+FL +HVPI NTQ VAEQLVG G+CST+HIKTLTG+AL +RWR+
Sbjct:   39 TTQLHLAYFLIPLLSYLFTTIAAFR-PPASPWHGRSFLTLPRAVADRNVPASS--GEEIWKSKYGTTSAAASRPRSSFPPAAHHFSASPDRRRSGRNDRSKKEWERSAPEEFLLILTRLRA--------------------EENSGRAPLL---DEETERDIGHVIKLVRALANRQWEQAEESAALLCRSPLLDTVLSRMVVYAATQRNEPDLALEILGGMREKRIDVDAFMASLVAKAAATDRRWMPVVEVIRAQLSSNPGGDLIMPGTPQGRRHGGFTQALASTIERGKFYSSSFLVDALLQFRMVDLFTAKVALKFYRFSRTPARGLPWITTARAIGLIPDADLDFEVGRVYKSLGMWREAVALLSEMVEQKRAVEDEHVGVVLSACHQAGEWKECLATLSKMREWGLSVGRVSYLIVLRLLLEKRRLDQVRSVLQQMEAQGSPLDAETARLALFTLAKRGPVYSSLEFLKLMPVFGVEPDLVSYTAVIRACARFQQPDLALEVLTLMAKNGMAPDVLACATAMDALSGAARWDEAFALFDGCRSQGLRPDIKCWTQVLGMATQAGRWDLFPAYLEAAVGEARVHKTGLDLRFFATVINACAEGNRTDEALAVLASVRSYGLMPNVVCFTAAAKACLARRRWRDALGLLEEAQKEGVPADATLYRTVLGCCWRARQWQSVLKLYGEMLERGLEVDSRMYTSLMDALAGAGQSELAANVLQDMVANGIAPVDATWSAFFQSWYHKGEYGTPWKLIEELVRWEDEGGMDSNAAWMPRKVIVSDADQRRPSADGSRAGSRQGPRAGLGTGPGPRTLADLMHVCARREDWGEVLELQRRITDMGLPPTATRAPHLVVRAYAELGRWTEAQQFLCDCMHQGVSTESTQNYTSHDERASDQARQVPATENSRPFSVSWSRTYGALLTLCSKRIEPVRALALLKDMEDKQLAPDAEAYHAVMDACAQAGMKGEVRMVFEKLRARADLLPRVESFTIMLDLCAREGGKGEEALRLMDDLEGLGLTPDMLCFNAAMEACREASMLETDPGEGRYRRAMRKWRDVEVMHTYNSEMAVLATRKGGQDGEASSTALRYLREMQANGIPRDTDSFNMALEACARGGNLQEARTVFEELQAAATEEAQGPSARPDIFSYITLANALAKDGRDSEAMAWLNHMVGLAVDE------AKAVVGAAPNKTKGRTNAGRKAIQPSGNSERLGMNKSSTSRVGTNILLADETPALPSPSTPIGDLEEADGFTPSSLLHLSSASIRKKTRWPAYYRNLWPQTVKTLSKNILVLARCASPREQATRCADIGKLLEFLDSHVPILNTQVVAEQLVGMGICSTKHIKTLTGNALKMRWRE 1366

The following BLAST results are available for this feature:

BLAST of NO05G01310.1 vs.

BLAST of NO05G01310.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28211.1	0.000e+0	66.32	atp binding protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G01310	NO05G01310	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01310.1	NO05G01310.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO05G01310.1.cds1	NO05G01310.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:373347..377453-
coding sequence from alignment at chr5:373347..377453-

mRNA sequence

>NO05G01310.1 ID=NO05G01310.1|Name=NO05G01310.1|organism=Nannochloropsis oceanica|type=mRNA|length=4107bp
ATGACGAGCGACCTGACAAGTGCAACCTCAAGAGCATGCTACCCCTGGAC
AAGAAGGAGAGAAAGAGGAGGATTCCGAGGAGTAGCGACTTCAGAAGATT
ATCTTTCCAGTAAGCTGCTGCTTGCGCTCTTGTATCTAGCCGTCAGCACC
CAGGCCTTCCTCCTTCCCCGGGCTCTACCACCATGCCAACGCCCCCTTCT
CAACTTCGCCCTCGCCGCCACTAAAGAGGGCGCGGCGGCACCCTCATGGT
TTGGAGAGGACATGTGGAAAAGCAACGATGTCACAACCGCTGCTCGTACA
GAATTCGCACCATCGTCGCCCTCTTCTTCCGCCCCTCAATTCTCCACCTC
CCCTGGCCGTCGACGGAGCAGCGGCAAAGGTGGCAACAAGAAGGAATGGG
AAAGATCGGCACCTGAAGAGTTTCTGCTCATTCTGACGAGTTTACGCGCG
CACTATAGTGGCCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGGGGGA
GGAGATGGAAGAGGAGGAAGAGGAGGTGGCGAAACTCTCTGAAGACGATG
ACGGGGAAGCAGAAATAGACATCGGGCACGTCATCAACCTTGTCCGTGCT
CTGGCCAACCGTCAATGGCAGCAAGCGGAGGAGTCTGCCGCCTTGCTGTG
CCATAGCCAGTTGCTCGACACGGTGCTGTCACGTATGGTGGTTTATGCGG
CAACCCAAAGAAATGAACCTGATTTGGCCCTAGAAATCTTGGGGGGGATG
CGTGAGAAAAGGATAGATGTCGATGCATTCATGGCTTCATTAGTAGCAAA
AGCAGCAGCAACGGACCGGAGGTGGATGCCTGTCATAGAGGTGATAAGGG
CGCAGTTGTCTACGAATCCTGGGGGGTCATTGACCATGCCGGCGGTGATG
AAGGGGAGGAGACACGAGGGATTCACGCAGGCACTGGCCTCGACAATCGA
ACGGGGCAAGTTTTATTCGTCATCTTTTCTTGTCGATGCCTTGCTGCAAT
TTCGGATGGTGGACTTGTTCACGGCGAAAGTGGCCGTGAAATTTTATCGC
TTTAGTAGGACGCCTGCAAGGGGGCTGCCATGGATAGCCACAGCGCGGGC
GATTGGGCTGATACCTGATGCGGATTTGGATTTTGAAGTCGGAAGGATGT
ATAAATCTTTGGGGATGTGGAGGGAGGCGGTGGCGCTTTTGAATGAGATG
GTGGAGAAAGGGCGGAGCGTGGAGGATGAACATGTGGGGGTGGTGTTGAG
TGCATGTCACCAAGCGGGGGAATGGGGGGAGTGTATGGAAGTGCTGGAAC
GGATGCATGGGTGGGGCTTGAGGGTAGGGAGGGTTTCGTACCTCATTGTC
CTTCGTCTTTTACTAGAAAAAAGGAGACTAGATCAAGTTAGAACTGTACT
TGGCCAGATGCAGAAGCAGGGGACGCCGCTCGATGCGGAAACTGCGAGGT
TGGTACTGTTCACATTGGCCAAACGAGGGCCGGTTTATAGTAGCATGGAA
TTTTTGAAGTTGATGCCCGCGTGGGGAGTAGAGCCTGATTTGGTTACGTA
TACGGCGGTGTTAAGGGCGTGTGCGAGGTTTCAAGAACCGGATCGGGCAT
TGGAGGTGTTAAAAATAATGGAGGGGAAGGGGATGACGGTTGATGTTCTG
GCATGTGTGACTGTAATGGAAGCCTTGTCAGGGGCTTCGAGGTGGGATGA
GGCCTTCGGATTGTTTGATTCGTGTCGAGCAGGGGGACTACGACCGGATA
TCAAGTGTTGGACGCAGGTGTTGCATCAGGCAACGCAGGCGGGGAGGTGG
GATCTGTTCCCGACTTACCTACACGCAGCAGTTGGGGAGGCGAGGACGCA
TCAAACAGGTTTGGACTTACGGTTTTTTGCAACGGTAATTAATGCATGCG
CCGAAGCGAATCGAACGGATGAGGCATTGGCAGTGTTGGCAAGTGTGCGT
TCGTATGGTTTGGTCCCTAACGTGGTATGTTATTCAGCGGCGGCTAAATC
TTGTTTAGCAAGGAATAGATGGAGGGATGCCTTGGGACTGTTGGAGGAAG
CGAACGAGCAGGGAATTCCCACTGATGCCACAATGTATAGAACTGTTTTG
CGGTGTTGTTGGCAAGCAAGACAATGGCAGAGCGTTCTGAAATTGTACGG
AGAGATGTTGGAGAGGGGGCTAGAGGTCGACGGGCAAATGTACACGCAAC
TGATGGATGTGCTGGCGAGGGCAGGACAGGCAGAATTGGCGGCGGATCTG
TTGCAGGAAATGGTGGCCAACGGCGTGATACCCGTCGATAGGACTTTGAG
TGCATTTTTTCAGTGTTGGTATCAGAAGGGGGAATATGAGGAGGCTTGGC
GGAGGGTGGGGAGGGTGGCAAGGTGGGAGGAGGAGGACGAGGAGGAGGAA
GATTACGAGATAATGGGCACATTTGCCGCTGGTGGTGCTGCTAGTGGGAA
GAGGAGTAACATTCAACCGTTGTTGCAACCTGGCTTGGGCACCTTTGCTG
ATTTAATGAACGTGTGTGCGCGGAGGGAGGACTGGGAGGAGGTGCTTCGG
TTGCACGAGCGGATGAAAGATATGGGCTTGCCTACCACAGCGATGAGGGC
TCCGCATCTAGTGGCTAGGGCATACGCAGAAATGGGAAGGTGGGAAGAGG
CGAGGCGGTTTCTGAAGGAGGGCATAGAAGGGGTCGCGAGTACTGACATA
GCAGGAGCACCAGCAGCAGGAGCGGCAGCAGGGCATTCTACTATGGCGTG
GGGGAAGGCGTATGGGGCTTTGTTGACCATGTGTAGTAAGAGGATTGAGC
CTACCCGAGCCTTGAACTTACTGGAGGAGATGGAGATGAGGGAGATAGCA
CCTGATGCAGAGGCCTATCATGCTGTAATGGACGCGTGTGCGCAGTCAGG
GATGGAGGGGGAGGTACGGACGGTATTTGAAAAAATGAGGGGAAGGGGGG
ATATTATACCGAGTGTGGAGTCATTCACGATAATGTTGGAATTGTGTGCA
AGGGAGGGGGAGAAGGGGGAGGAGGCTTTAAGGTTGATGGAAGATTTGGA
AGGATTGGGTTTGACCCCTGACATGTTGTGTTTCAATGCGGCGATGGAGG
CGTGCCGGGAGGCCAGCTTGGGAGAGCGAGGAAAGGAGGGGGGCCGGTTC
AGGGCGGCGATGCGGAAGTGGAGGGATCTGGAGGTCATGCACACATATAA
TTCGGAAATCGCTGTCTTGGCAACTAGGAAGGGGGGATTTGACGATGGGG
CGTCGGCGACTGCCTTGAGATATTTGAAGGAAATGCGTGATAATGGAATT
CCGCGCGATGCGGATTCGTTCAATATGGCTTTGGAAGCCTGTGCGAGGGC
AGGAGATCTGACCGGGGTTCGGGAGGTGTTTGCCGAGTTGCAGGTCGAGA
GAACGGCGAAGGAAGGGGTTGAGGTCAAGCCGGACATTTTTTCGTACATC
ACTATGGCGAATGCGTTGGTTGGGGAGGGGCAGGGGGTGGAGGCGATGGC
TTTGTTGAATTATTTGGTGGGATTGGCGAGTGACGATGACGGTGCTGGAA
CCGTTGCTGCTGCTGCGGTGGGCTCAACAACGACAACGATGGCGGCAGCA
GGTGCTGCGAACAAAGAGATCAAACGAGGGAAAGGAAGAGTAGGACCTGG
GAAGCAATCGGTCTCGCGGACGTCAAAGCGCATTGACAAGAGTTTCACCT
CGCAAACAGCTCCGCCTTCTCTCCCTACTTCCATTCTCACCTCTCCATTA
CCACCATCATCAGCTAATGTGGGCATCCGTATAAAGACCCGCTGGCCCGC
CTATTATCGCTTTTTATGGCCCCGTACTGCGAAGACACTCAGCAAAACCA
TCATCACCCTCGCGAGCTCCGGTCCTCCATCCCAACAAGCAACTCGCTGC
GCAGATATTGGACGATTACTACAGTTTTTGAGAACGCACGTCCCTATATT
TAATACGCAGGCCGTGGCTGAACAGTTGGTGGGGAGAGGTATGTGCTCGA
CGGAGCATATCAAGACACTGACGGGCGATGCGCTGGCGGTGAGATGGAGG
AAGGGTGCGGAGCAGGCGGAGGGAAACAATAGGAATGCAGGTTGGGGGCT
TTTCTGA

protein sequence of NO05G01310.1

>NO05G01310.1-protein ID=NO05G01310.1-protein|Name=NO05G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1369bp
MTSDLTSATSRACYPWTRRRERGGFRGVATSEDYLSSKLLLALLYLAVST
QAFLLPRALPPCQRPLLNFALAATKEGAAAPSWFGEDMWKSNDVTTAART
EFAPSSPSSSAPQFSTSPGRRRSSGKGGNKKEWERSAPEEFLLILTSLRA
HYSGQQQQQQQQQQQGEEMEEEEEEVAKLSEDDDGEAEIDIGHVINLVRA
LANRQWQQAEESAALLCHSQLLDTVLSRMVVYAATQRNEPDLALEILGGM
REKRIDVDAFMASLVAKAAATDRRWMPVIEVIRAQLSTNPGGSLTMPAVM
KGRRHEGFTQALASTIERGKFYSSSFLVDALLQFRMVDLFTAKVAVKFYR
FSRTPARGLPWIATARAIGLIPDADLDFEVGRMYKSLGMWREAVALLNEM
VEKGRSVEDEHVGVVLSACHQAGEWGECMEVLERMHGWGLRVGRVSYLIV
LRLLLEKRRLDQVRTVLGQMQKQGTPLDAETARLVLFTLAKRGPVYSSME
FLKLMPAWGVEPDLVTYTAVLRACARFQEPDRALEVLKIMEGKGMTVDVL
ACVTVMEALSGASRWDEAFGLFDSCRAGGLRPDIKCWTQVLHQATQAGRW
DLFPTYLHAAVGEARTHQTGLDLRFFATVINACAEANRTDEALAVLASVR
SYGLVPNVVCYSAAAKSCLARNRWRDALGLLEEANEQGIPTDATMYRTVL
RCCWQARQWQSVLKLYGEMLERGLEVDGQMYTQLMDVLARAGQAELAADL
LQEMVANGVIPVDRTLSAFFQCWYQKGEYEEAWRRVGRVARWEEEDEEEE
DYEIMGTFAAGGAASGKRSNIQPLLQPGLGTFADLMNVCARREDWEEVLR
LHERMKDMGLPTTAMRAPHLVARAYAEMGRWEEARRFLKEGIEGVASTDI
AGAPAAGAAAGHSTMAWGKAYGALLTMCSKRIEPTRALNLLEEMEMREIA
PDAEAYHAVMDACAQSGMEGEVRTVFEKMRGRGDIIPSVESFTIMLELCA
REGEKGEEALRLMEDLEGLGLTPDMLCFNAAMEACREASLGERGKEGGRF
RAAMRKWRDLEVMHTYNSEIAVLATRKGGFDDGASATALRYLKEMRDNGI
PRDADSFNMALEACARAGDLTGVREVFAELQVERTAKEGVEVKPDIFSYI
TMANALVGEGQGVEAMALLNYLVGLASDDDGAGTVAAAAVGSTTTTMAAA
GAANKEIKRGKGRVGPGKQSVSRTSKRIDKSFTSQTAPPSLPTSILTSPL
PPSSANVGIRIKTRWPAYYRFLWPRTAKTLSKTIITLASSGPPSQQATRC
ADIGRLLQFLRTHVPIFNTQAVAEQLVGRGMCSTEHIKTLTGDALAVRWR
KGAEQAEGNNRNAGWGLF*

mRNA from alignment at chr5:373347..377453-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO05G01310.1 ID=NO05G01310.1|Name=NO05G01310.1|organism=Nannochloropsis oceanica|type=mRNA|length=4107bp|location=Sequence derived from alignment at chr5:373347..377453- (Nannochloropsis oceanica)
ATGACGAGCGACCTGACAAGTGCAACCTCAAGAGCATGCTACCCCTGGAC
AAGAAGGAGAGAAAGAGGAGGATTCCGAGGAGTAGCGACTTCAGAAGATT
ATCTTTCCAGTAAGCTGCTGCTTGCGCTCTTGTATCTAGCCGTCAGCACC
CAGGCCTTCCTCCTTCCCCGGGCTCTACCACCATGCCAACGCCCCCTTCT
CAACTTCGCCCTCGCCGCCACTAAAGAGGGCGCGGCGGCACCCTCATGGT
TTGGAGAGGACATGTGGAAAAGCAACGATGTCACAACCGCTGCTCGTACA
GAATTCGCACCATCGTCGCCCTCTTCTTCCGCCCCTCAATTCTCCACCTC
CCCTGGCCGTCGACGGAGCAGCGGCAAAGGTGGCAACAAGAAGGAATGGG
AAAGATCGGCACCTGAAGAGTTTCTGCTCATTCTGACGAGTTTACGCGCG
CACTATAGTGGCCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGGGGGA
GGAGATGGAAGAGGAGGAAGAGGAGGTGGCGAAACTCTCTGAAGACGATG
ACGGGGAAGCAGAAATAGACATCGGGCACGTCATCAACCTTGTCCGTGCT
CTGGCCAACCGTCAATGGCAGCAAGCGGAGGAGTCTGCCGCCTTGCTGTG
CCATAGCCAGTTGCTCGACACGGTGCTGTCACGTATGGTGGTTTATGCGG
CAACCCAAAGAAATGAACCTGATTTGGCCCTAGAAATCTTGGGGGGGATG
CGTGAGAAAAGGATAGATGTCGATGCATTCATGGCTTCATTAGTAGCAAA
AGCAGCAGCAACGGACCGGAGGTGGATGCCTGTCATAGAGGTGATAAGGG
CGCAGTTGTCTACGAATCCTGGGGGGTCATTGACCATGCCGGCGGTGATG
AAGGGGAGGAGACACGAGGGATTCACGCAGGCACTGGCCTCGACAATCGA
ACGGGGCAAGTTTTATTCGTCATCTTTTCTTGTCGATGCCTTGCTGCAAT
TTCGGATGGTGGACTTGTTCACGGCGAAAGTGGCCGTGAAATTTTATCGC
TTTAGTAGGACGCCTGCAAGGGGGCTGCCATGGATAGCCACAGCGCGGGC
GATTGGGCTGATACCTGATGCGGATTTGGATTTTGAAGTCGGAAGGATGT
ATAAATCTTTGGGGATGTGGAGGGAGGCGGTGGCGCTTTTGAATGAGATG
GTGGAGAAAGGGCGGAGCGTGGAGGATGAACATGTGGGGGTGGTGTTGAG
TGCATGTCACCAAGCGGGGGAATGGGGGGAGTGTATGGAAGTGCTGGAAC
GGATGCATGGGTGGGGCTTGAGGGTAGGGAGGGTTTCGTACCTCATTGTC
CTTCGTCTTTTACTAGAAAAAAGGAGACTAGATCAAGTTAGAACTGTACT
TGGCCAGATGCAGAAGCAGGGGACGCCGCTCGATGCGGAAACTGCGAGGT
TGGTACTGTTCACATTGGCCAAACGAGGGCCGGTTTATAGTAGCATGGAA
TTTTTGAAGTTGATGCCCGCGTGGGGAGTAGAGCCTGATTTGGTTACGTA
TACGGCGGTGTTAAGGGCGTGTGCGAGGTTTCAAGAACCGGATCGGGCAT
TGGAGGTGTTAAAAATAATGGAGGGGAAGGGGATGACGGTTGATGTTCTG
GCATGTGTGACTGTAATGGAAGCCTTGTCAGGGGCTTCGAGGTGGGATGA
GGCCTTCGGATTGTTTGATTCGTGTCGAGCAGGGGGACTACGACCGGATA
TCAAGTGTTGGACGCAGGTGTTGCATCAGGCAACGCAGGCGGGGAGGTGG
GATCTGTTCCCGACTTACCTACACGCAGCAGTTGGGGAGGCGAGGACGCA
TCAAACAGGTTTGGACTTACGGTTTTTTGCAACGGTAATTAATGCATGCG
CCGAAGCGAATCGAACGGATGAGGCATTGGCAGTGTTGGCAAGTGTGCGT
TCGTATGGTTTGGTCCCTAACGTGGTATGTTATTCAGCGGCGGCTAAATC
TTGTTTAGCAAGGAATAGATGGAGGGATGCCTTGGGACTGTTGGAGGAAG
CGAACGAGCAGGGAATTCCCACTGATGCCACAATGTATAGAACTGTTTTG
CGGTGTTGTTGGCAAGCAAGACAATGGCAGAGCGTTCTGAAATTGTACGG
AGAGATGTTGGAGAGGGGGCTAGAGGTCGACGGGCAAATGTACACGCAAC
TGATGGATGTGCTGGCGAGGGCAGGACAGGCAGAATTGGCGGCGGATCTG
TTGCAGGAAATGGTGGCCAACGGCGTGATACCCGTCGATAGGACTTTGAG
TGCATTTTTTCAGTGTTGGTATCAGAAGGGGGAATATGAGGAGGCTTGGC
GGAGGGTGGGGAGGGTGGCAAGGTGGGAGGAGGAGGACGAGGAGGAGGAA
GATTACGAGATAATGGGCACATTTGCCGCTGGTGGTGCTGCTAGTGGGAA
GAGGAGTAACATTCAACCGTTGTTGCAACCTGGCTTGGGCACCTTTGCTG
ATTTAATGAACGTGTGTGCGCGGAGGGAGGACTGGGAGGAGGTGCTTCGG
TTGCACGAGCGGATGAAAGATATGGGCTTGCCTACCACAGCGATGAGGGC
TCCGCATCTAGTGGCTAGGGCATACGCAGAAATGGGAAGGTGGGAAGAGG
CGAGGCGGTTTCTGAAGGAGGGCATAGAAGGGGTCGCGAGTACTGACATA
GCAGGAGCACCAGCAGCAGGAGCGGCAGCAGGGCATTCTACTATGGCGTG
GGGGAAGGCGTATGGGGCTTTGTTGACCATGTGTAGTAAGAGGATTGAGC
CTACCCGAGCCTTGAACTTACTGGAGGAGATGGAGATGAGGGAGATAGCA
CCTGATGCAGAGGCCTATCATGCTGTAATGGACGCGTGTGCGCAGTCAGG
GATGGAGGGGGAGGTACGGACGGTATTTGAAAAAATGAGGGGAAGGGGGG
ATATTATACCGAGTGTGGAGTCATTCACGATAATGTTGGAATTGTGTGCA
AGGGAGGGGGAGAAGGGGGAGGAGGCTTTAAGGTTGATGGAAGATTTGGA
AGGATTGGGTTTGACCCCTGACATGTTGTGTTTCAATGCGGCGATGGAGG
CGTGCCGGGAGGCCAGCTTGGGAGAGCGAGGAAAGGAGGGGGGCCGGTTC
AGGGCGGCGATGCGGAAGTGGAGGGATCTGGAGGTCATGCACACATATAA
TTCGGAAATCGCTGTCTTGGCAACTAGGAAGGGGGGATTTGACGATGGGG
CGTCGGCGACTGCCTTGAGATATTTGAAGGAAATGCGTGATAATGGAATT
CCGCGCGATGCGGATTCGTTCAATATGGCTTTGGAAGCCTGTGCGAGGGC
AGGAGATCTGACCGGGGTTCGGGAGGTGTTTGCCGAGTTGCAGGTCGAGA
GAACGGCGAAGGAAGGGGTTGAGGTCAAGCCGGACATTTTTTCGTACATC
ACTATGGCGAATGCGTTGGTTGGGGAGGGGCAGGGGGTGGAGGCGATGGC
TTTGTTGAATTATTTGGTGGGATTGGCGAGTGACGATGACGGTGCTGGAA
CCGTTGCTGCTGCTGCGGTGGGCTCAACAACGACAACGATGGCGGCAGCA
GGTGCTGCGAACAAAGAGATCAAACGAGGGAAAGGAAGAGTAGGACCTGG
GAAGCAATCGGTCTCGCGGACGTCAAAGCGCATTGACAAGAGTTTCACCT
CGCAAACAGCTCCGCCTTCTCTCCCTACTTCCATTCTCACCTCTCCATTA
CCACCATCATCAGCTAATGTGGGCATCCGTATAAAGACCCGCTGGCCCGC
CTATTATCGCTTTTTATGGCCCCGTACTGCGAAGACACTCAGCAAAACCA
TCATCACCCTCGCGAGCTCCGGTCCTCCATCCCAACAAGCAACTCGCTGC
GCAGATATTGGACGATTACTACAGTTTTTGAGAACGCACGTCCCTATATT
TAATACGCAGGCCGTGGCTGAACAGTTGGTGGGGAGAGGTATGTGCTCGA
CGGAGCATATCAAGACACTGACGGGCGATGCGCTGGCGGTGAGATGGAGG
AAGGGTGCGGAGCAGGCGGAGGGAAACAATAGGAATGCAGGTTGGGGGCT
TTTCTGA

Coding sequence (CDS) from alignment at chr5:373347..377453-

>NO05G01310.1 ID=NO05G01310.1|Name=NO05G01310.1|organism=Nannochloropsis oceanica|type=CDS|length=4107bp|location=Sequence derived from alignment at chr5:373347..377453- (Nannochloropsis oceanica)
ATGACGAGCGACCTGACAAGTGCAACCTCAAGAGCATGCTACCCCTGGAC
AAGAAGGAGAGAAAGAGGAGGATTCCGAGGAGTAGCGACTTCAGAAGATT
ATCTTTCCAGTAAGCTGCTGCTTGCGCTCTTGTATCTAGCCGTCAGCACC
CAGGCCTTCCTCCTTCCCCGGGCTCTACCACCATGCCAACGCCCCCTTCT
CAACTTCGCCCTCGCCGCCACTAAAGAGGGCGCGGCGGCACCCTCATGGT
TTGGAGAGGACATGTGGAAAAGCAACGATGTCACAACCGCTGCTCGTACA
GAATTCGCACCATCGTCGCCCTCTTCTTCCGCCCCTCAATTCTCCACCTC
CCCTGGCCGTCGACGGAGCAGCGGCAAAGGTGGCAACAAGAAGGAATGGG
AAAGATCGGCACCTGAAGAGTTTCTGCTCATTCTGACGAGTTTACGCGCG
CACTATAGTGGCCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGGGGGA
GGAGATGGAAGAGGAGGAAGAGGAGGTGGCGAAACTCTCTGAAGACGATG
ACGGGGAAGCAGAAATAGACATCGGGCACGTCATCAACCTTGTCCGTGCT
CTGGCCAACCGTCAATGGCAGCAAGCGGAGGAGTCTGCCGCCTTGCTGTG
CCATAGCCAGTTGCTCGACACGGTGCTGTCACGTATGGTGGTTTATGCGG
CAACCCAAAGAAATGAACCTGATTTGGCCCTAGAAATCTTGGGGGGGATG
CGTGAGAAAAGGATAGATGTCGATGCATTCATGGCTTCATTAGTAGCAAA
AGCAGCAGCAACGGACCGGAGGTGGATGCCTGTCATAGAGGTGATAAGGG
CGCAGTTGTCTACGAATCCTGGGGGGTCATTGACCATGCCGGCGGTGATG
AAGGGGAGGAGACACGAGGGATTCACGCAGGCACTGGCCTCGACAATCGA
ACGGGGCAAGTTTTATTCGTCATCTTTTCTTGTCGATGCCTTGCTGCAAT
TTCGGATGGTGGACTTGTTCACGGCGAAAGTGGCCGTGAAATTTTATCGC
TTTAGTAGGACGCCTGCAAGGGGGCTGCCATGGATAGCCACAGCGCGGGC
GATTGGGCTGATACCTGATGCGGATTTGGATTTTGAAGTCGGAAGGATGT
ATAAATCTTTGGGGATGTGGAGGGAGGCGGTGGCGCTTTTGAATGAGATG
GTGGAGAAAGGGCGGAGCGTGGAGGATGAACATGTGGGGGTGGTGTTGAG
TGCATGTCACCAAGCGGGGGAATGGGGGGAGTGTATGGAAGTGCTGGAAC
GGATGCATGGGTGGGGCTTGAGGGTAGGGAGGGTTTCGTACCTCATTGTC
CTTCGTCTTTTACTAGAAAAAAGGAGACTAGATCAAGTTAGAACTGTACT
TGGCCAGATGCAGAAGCAGGGGACGCCGCTCGATGCGGAAACTGCGAGGT
TGGTACTGTTCACATTGGCCAAACGAGGGCCGGTTTATAGTAGCATGGAA
TTTTTGAAGTTGATGCCCGCGTGGGGAGTAGAGCCTGATTTGGTTACGTA
TACGGCGGTGTTAAGGGCGTGTGCGAGGTTTCAAGAACCGGATCGGGCAT
TGGAGGTGTTAAAAATAATGGAGGGGAAGGGGATGACGGTTGATGTTCTG
GCATGTGTGACTGTAATGGAAGCCTTGTCAGGGGCTTCGAGGTGGGATGA
GGCCTTCGGATTGTTTGATTCGTGTCGAGCAGGGGGACTACGACCGGATA
TCAAGTGTTGGACGCAGGTGTTGCATCAGGCAACGCAGGCGGGGAGGTGG
GATCTGTTCCCGACTTACCTACACGCAGCAGTTGGGGAGGCGAGGACGCA
TCAAACAGGTTTGGACTTACGGTTTTTTGCAACGGTAATTAATGCATGCG
CCGAAGCGAATCGAACGGATGAGGCATTGGCAGTGTTGGCAAGTGTGCGT
TCGTATGGTTTGGTCCCTAACGTGGTATGTTATTCAGCGGCGGCTAAATC
TTGTTTAGCAAGGAATAGATGGAGGGATGCCTTGGGACTGTTGGAGGAAG
CGAACGAGCAGGGAATTCCCACTGATGCCACAATGTATAGAACTGTTTTG
CGGTGTTGTTGGCAAGCAAGACAATGGCAGAGCGTTCTGAAATTGTACGG
AGAGATGTTGGAGAGGGGGCTAGAGGTCGACGGGCAAATGTACACGCAAC
TGATGGATGTGCTGGCGAGGGCAGGACAGGCAGAATTGGCGGCGGATCTG
TTGCAGGAAATGGTGGCCAACGGCGTGATACCCGTCGATAGGACTTTGAG
TGCATTTTTTCAGTGTTGGTATCAGAAGGGGGAATATGAGGAGGCTTGGC
GGAGGGTGGGGAGGGTGGCAAGGTGGGAGGAGGAGGACGAGGAGGAGGAA
GATTACGAGATAATGGGCACATTTGCCGCTGGTGGTGCTGCTAGTGGGAA
GAGGAGTAACATTCAACCGTTGTTGCAACCTGGCTTGGGCACCTTTGCTG
ATTTAATGAACGTGTGTGCGCGGAGGGAGGACTGGGAGGAGGTGCTTCGG
TTGCACGAGCGGATGAAAGATATGGGCTTGCCTACCACAGCGATGAGGGC
TCCGCATCTAGTGGCTAGGGCATACGCAGAAATGGGAAGGTGGGAAGAGG
CGAGGCGGTTTCTGAAGGAGGGCATAGAAGGGGTCGCGAGTACTGACATA
GCAGGAGCACCAGCAGCAGGAGCGGCAGCAGGGCATTCTACTATGGCGTG
GGGGAAGGCGTATGGGGCTTTGTTGACCATGTGTAGTAAGAGGATTGAGC
CTACCCGAGCCTTGAACTTACTGGAGGAGATGGAGATGAGGGAGATAGCA
CCTGATGCAGAGGCCTATCATGCTGTAATGGACGCGTGTGCGCAGTCAGG
GATGGAGGGGGAGGTACGGACGGTATTTGAAAAAATGAGGGGAAGGGGGG
ATATTATACCGAGTGTGGAGTCATTCACGATAATGTTGGAATTGTGTGCA
AGGGAGGGGGAGAAGGGGGAGGAGGCTTTAAGGTTGATGGAAGATTTGGA
AGGATTGGGTTTGACCCCTGACATGTTGTGTTTCAATGCGGCGATGGAGG
CGTGCCGGGAGGCCAGCTTGGGAGAGCGAGGAAAGGAGGGGGGCCGGTTC
AGGGCGGCGATGCGGAAGTGGAGGGATCTGGAGGTCATGCACACATATAA
TTCGGAAATCGCTGTCTTGGCAACTAGGAAGGGGGGATTTGACGATGGGG
CGTCGGCGACTGCCTTGAGATATTTGAAGGAAATGCGTGATAATGGAATT
CCGCGCGATGCGGATTCGTTCAATATGGCTTTGGAAGCCTGTGCGAGGGC
AGGAGATCTGACCGGGGTTCGGGAGGTGTTTGCCGAGTTGCAGGTCGAGA
GAACGGCGAAGGAAGGGGTTGAGGTCAAGCCGGACATTTTTTCGTACATC
ACTATGGCGAATGCGTTGGTTGGGGAGGGGCAGGGGGTGGAGGCGATGGC
TTTGTTGAATTATTTGGTGGGATTGGCGAGTGACGATGACGGTGCTGGAA
CCGTTGCTGCTGCTGCGGTGGGCTCAACAACGACAACGATGGCGGCAGCA
GGTGCTGCGAACAAAGAGATCAAACGAGGGAAAGGAAGAGTAGGACCTGG
GAAGCAATCGGTCTCGCGGACGTCAAAGCGCATTGACAAGAGTTTCACCT
CGCAAACAGCTCCGCCTTCTCTCCCTACTTCCATTCTCACCTCTCCATTA
CCACCATCATCAGCTAATGTGGGCATCCGTATAAAGACCCGCTGGCCCGC
CTATTATCGCTTTTTATGGCCCCGTACTGCGAAGACACTCAGCAAAACCA
TCATCACCCTCGCGAGCTCCGGTCCTCCATCCCAACAAGCAACTCGCTGC
GCAGATATTGGACGATTACTACAGTTTTTGAGAACGCACGTCCCTATATT
TAATACGCAGGCCGTGGCTGAACAGTTGGTGGGGAGAGGTATGTGCTCGA
CGGAGCATATCAAGACACTGACGGGCGATGCGCTGGCGGTGAGATGGAGG
AAGGGTGCGGAGCAGGCGGAGGGAAACAATAGGAATGCAGGTTGGGGGCT
TTTCTGA

Synonyms

Publications