NO05G01150.1, NO05G01150.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G01150.1
Unique NameNO05G01150.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2228
Alignment locationchr5:336983..339425 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:336983..339425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO05G01150.1 vs.
Match: EWM28205.1 (ethanolamine-phosphate cytidylyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 786.6 bits (2030), Expect = 5.200e-224
Identity = 406/481 (84.41%), Postives = 428/481 (88.98%), Query Frame = 0 
Query:    1 MPSVVESCDATAGGLSQAANANNDNNRIQAMWCILQAKTLEMLDSPYMLKLTKRLAVLLESLGVPPPYPEPDQIALCVTAVLTTLLLYFLLFGKRHRLRRKMLAKDLREARKKVQELEEKLLEMEVKEEGASPKGNQRPVRIWMDGCFDMMHYGHMNAFRQGKALGTFLVVGVNSDATITACKGPPVMNDEERLAAVEGCRFVDEVVPDVPYVMDEAYLKRVMEKYRIDFVVHGDDPCIVNGRDVYEVPQKMGKYRTIPRTEGVSTTDIVGRMLLMSRRHHQRTESTGSQTGQLASEKKMPKGGSQGRVGGAVGEAEAREQQLQQAQEGAAFYRRSRFLTTSRMIRLFSAGMRAGPPHRDSKVVYIDGSWDMFHAGHIKTLKKIKEGN---GSGGIFLIVGVHNDQVVNAQRGSNFPIMNLHERVLSVLGCKYVDDVLIDAPYKVTREMIASLNLSLVLHGAHRDENDEEGSWKGDGREGG 479
            M   VESCDATAGG SQ  N +N  N++QA+WCILQAKTL++LDSP+ML LT+RLAVLLE+LGVPPPYPEPDQI LCVTAVL+TLLLYFLLFGKRHRLRRKMLAKDLREARKKVQELEEKLLEMEVKEEGA PKG+Q PVRIWMDGCFDMMHYGHMNAFRQGKALGT+LVVGVNSDATITACKGPPVMNDEERLAAVEGCRFVDEVVPDVPY+MDE YLK VMEKYRIDFVVHGDDPCIVNGRDVYE+PQ MGKYRTIPRTEGVSTTDIVGRMLLMSRRHHQRT STGSQTGQLASEKK   G  Q   G +  E EA EQQL   QEGAAFYRRSRFLTTSRMIRLFSAGMRAGPP   S+VVYIDGSWDMFHAGH+ TLKKIKEG        +FLIVGVHNDQVVNAQRGSNFPIMNLHERVLSVLGCKYVDDVLIDAPY VTREMIASL LSLVLHG HRD+ ++EG+W G   EGG
Sbjct:    1 MSPSVESCDATAGGFSQG-NGHNYKNKLQAIWCILQAKTLDLLDSPFMLSLTQRLAVLLEALGVPPPYPEPDQIVLCVTAVLSTLLLYFLLFGKRHRLRRKMLAKDLREARKKVQELEEKLLEMEVKEEGAGPKGDQEPVRIWMDGCFDMMHYGHMNAFRQGKALGTYLVVGVNSDATITACKGPPVMNDEERLAAVEGCRFVDEVVPDVPYIMDEDYLKMVMEKYRIDFVVHGDDPCIVNGRDVYELPQSMGKYRTIPRTEGVSTTDIVGRMLLMSRRHHQRTMSTGSQTGQLASEKKTQGGALQ--EGVSPSEIEALEQQLHH-QEGAAFYRRSRFLTTSRMIRLFSAGMRAGPPQPGSQVVYIDGSWDMFHAGHVTTLKKIKEGRCLPEGQPVFLIVGVHNDQVVNAQRGSNFPIMNLHERVLSVLGCKYVDDVLIDAPYTVTREMIASLKLSLVLHGRHRDDIEDEGTWGGGWGEGG 477
The following BLAST results are available for this feature:
BLAST of NO05G01150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28205.15.200e-22484.41ethanolamine-phosphate cytidylyltransferase [Nanno... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01150NO05G01150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G01150.1NO05G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G01150.1.cds1NO05G01150.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G01150.1.cds2NO05G01150.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G01150.1.cds3NO05G01150.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G01150.1 ID=NO05G01150.1|Name=NO05G01150.1|organism=Nannochloropsis oceanica|type=mRNA|length=2228bp
TGATAGTATGGCTGCTCTTCCTGTATGGGACGAAAAGATGGATGAGGCGT
CGTGGTGTGTACGGAGCCTTAAAAAGAAAGCAGCGAGGTCACGTCCCGGG
TGCTTCAAGAAGTTCAAGCAAATTGTGACGGCGGGACATTAGACTTGCTC
CTGTCTCACCCCAACAACCAATTCTCCAACCCAACCAAACCCGCCTCCAT
CTCATCAGACTGCTTATGTGTGATTGCTTAGAGGTATCGAGGGCATCTTG
GCTGGAGCTTTGGATGCGGATTACGACCTCCGGGATCAACTTCACGGCCG
GGCCTCTATCGGACGTACTCTCATGCTCTCTACGCTCGACCAACCCAACA
TATCAACACAGGATCATCACGGGCAAGCATGCCTTCCGTCGTCGAGTCCT
GTGATGCAACAGCCGGCGGCTTGAGTCAAGCCGCCAACGCCAACAACGAC
AACAACAGAATACAGGCAATGTGGTGCATCTTGCAAGCCAAGACTTTGGA
AATGCTTGATAGCCCCTATATGCTCAAGCTCACGAAACGCTTGGCCGTGC
TTCTAGAGTCCTTGGGAGTTCCTCCTCCCTACCCAGAACCAGACCAAATC
GCCTTGTGCGTCACCGCTGTGCTCACCACCCTCCTCCTCTACTTCTTGCT
TTTCGGTAAACGCCATCGGTTGAGAAGAAAGATGCTGGCGAAAGATCTGA
GGGAGGCACGGAAAAAGGTGCAAGAATTGGAAGAAAAATTACTGGAGATG
GAAGTGAAGGAGGAGGGGGCGAGCCCAAAGGGGAATCAACGCCCTGTCCG
TATATGGATGGATGGCTGCTTTGATATGATGCACTATGGACATATGAACG
CGTTTCGACAGGGTAAGGCTTTGGGGACTTTTTTGGTGGTTGGGGTTAAC
TCAGATGCGACCATTACAGCATGCAAGGGGCCGCCGGTCATGAATGACGA
GGAAAGGCTGGCGGCCGTGGAGGGATGTCGCTTTGTGGATGAGGTAGTCC
CAGATGTACCGTATGTGATGGACGAGGCGTATCTAAAGAGGGTGATGGAG
AAGTATAGGATTGATTTCGTGGTGCATGGCGATGACCCTTGTATTGTGAA
TGGGAGAGATGTCTATGAGGTGCCTCAGAAGATGGGGAAATACCGCACAA
TTCCACGGACAGAGGGGGTGAGCACCACGGATATTGTGGGGAGAATGCTG
TTGATGAGCCGGAGGCATCACCAACGCACAGAGTCTACGGGCTCGCAGAC
GGGGCAATTGGCGTCGGAGAAGAAGATGCCAAAAGGTGGGTCGCAGGGTA
GAGTGGGAGGAGCGGTGGGGGAGGCGGAAGCCCGAGAGCAGCAGTTGCAG
CAGGCACAAGAGGGGGCAGCGTTCTACAGACGGTCTCGATTCTTGACCAC
CTCGAGAATGATCCGTTTGTTCTCCGCCGGCATGCGGGCCGGGCCGCCGC
ATCGGGATAGTAAAGTGGTGTACATCGATGGGAGTTGGGACATGTTCCAC
GCGGGGCACATCAAGACACTGAAGAAGATCAAGGAGGGTAATGGAAGTGG
GGGCATCTTTTTGATTGTGGGGGTGCACAATGATCAGGTGGTGAACGCAC
AACGAGGCTCCAACTTTCCAATCATGAACCTCCACGAGCGTGTCTTGTCC
GTGCTAGGCTGCAAATACGTCGATGACGTCCTGATTGATGCTCCCTACAA
GGTAACACGGGAGATGATCGCCTCCTTGAATCTCTCCTTGGTCCTGCATG
GCGCACACAGGGACGAGAATGACGAGGAGGGTTCATGGAAGGGGGATGGT
AGGGAGGGGGGGGCGGGCTGCGGGGAGGAGGATCCGTTTGCAGTGCCGAA
GGAGATGGGAATCTTTGGAGATGTGTCATCGGATTGCGCACTGTCCGTGC
GGGAGATCATTTCAAGGATTCAAAAAAACCAGGAGCTATTTGTGGCGAAG
TACAGTAAGAAGAAGGTGGCGGAGGATGAGTATTACAATGCACGGTATGC
GATTGAGGGGGAGAAGGAGGGAGGGAAGGAGAGGGAGGGAAGAAATGGGC
ATTGAGGAGGAGGAGGAGGAAACGGGAAGAGGACGAGGACGAGGACGAGG
GAGGAGGAGGAGAAAGGGGTGCGGTGTGATGCTGAGAATGGCGTAAGGAT
CGTCATGATGCACTGCATCCGATGGGGAGAAAGAAGGAGGGAAACGGGGA
AGGCATTGGCTTTCCGGGGTGGAAGGAT
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protein sequence of NO05G01150.1

>NO05G01150.1-protein ID=NO05G01150.1-protein|Name=NO05G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=559bp
MPSVVESCDATAGGLSQAANANNDNNRIQAMWCILQAKTLEMLDSPYMLK
LTKRLAVLLESLGVPPPYPEPDQIALCVTAVLTTLLLYFLLFGKRHRLRR
KMLAKDLREARKKVQELEEKLLEMEVKEEGASPKGNQRPVRIWMDGCFDM
MHYGHMNAFRQGKALGTFLVVGVNSDATITACKGPPVMNDEERLAAVEGC
RFVDEVVPDVPYVMDEAYLKRVMEKYRIDFVVHGDDPCIVNGRDVYEVPQ
KMGKYRTIPRTEGVSTTDIVGRMLLMSRRHHQRTESTGSQTGQLASEKKM
PKGGSQGRVGGAVGEAEAREQQLQQAQEGAAFYRRSRFLTTSRMIRLFSA
GMRAGPPHRDSKVVYIDGSWDMFHAGHIKTLKKIKEGNGSGGIFLIVGVH
NDQVVNAQRGSNFPIMNLHERVLSVLGCKYVDDVLIDAPYKVTREMIASL
NLSLVLHGAHRDENDEEGSWKGDGREGGAGCGEEDPFAVPKEMGIFGDVS
SDCALSVREIISRIQKNQELFVAKYSKKKVAEDEYYNARYAIEGEKEGGK
EREGRNGH*
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mRNA from alignment at chr5:336983..339425+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G01150.1 ID=NO05G01150.1|Name=NO05G01150.1|organism=Nannochloropsis oceanica|type=mRNA|length=2443bp|location=Sequence derived from alignment at chr5:336983..339425+ (Nannochloropsis oceanica)
TGATAGTATGGCTGCTCTTCCTGTATGGGACGAAAAGATGGATGAGGCGT
CGTGGTGTGTACGGAGCCTTAAAAAGAAAGCAGCGAGGTCACGTCCCGGG
TGCTTCAAGAAGTTCAAGCAAATTGTGACGGCGGGACATTAGACTTGCTC
CTGTCTCACCCCAACAACCAATTCTCCAACCCAACCAAACCCGCCTCCAT
CTCATCAGACTGCTTATGTGTGATTGCTTAGAGGTATCGAGGGCATCTTG
GCTGGAGCTTTGGATGCGGATTACGACCTCCGGGATCAACTTCACGGCCG
GGCCTCTATCGGACGTACTCTCATGCTCTCTACGCTCGACCAACCCAACA
TATCAACACAGGATCATCACGGGCAAGCATGCCTTCCGTCGTCGAGTCCT
GTGATGCAACAGCCGGCGGCTTGAGTCAAGGTAAGCAGCGAGCAGGTCAC
CCCGCGTTCCTCCCTCCGTCAGACACTCACTCGCATCATCCTCATCCCCT
TTCCAACACCAAACCCACCACCACCCCACAGCCGCCAACGCCAACAACGA
CAACAACAGAATACAGGCAATGTGGTGCATCTTGCAAGCCAAGACTTTGG
AAATGCTTGATAGCCCCTATATGCTCAAGCTCACGAAACGCTTGGCCGTG
CTTCTAGAGTCCTTGGGAGTTCCTCCTCCCTACCCAGAACCAGACCAAAT
CGCCTTGTGCGTCACCGCTGTGCTCACCACCCTCCTCCTCTACTTCTTGC
TTTTCGGTAAACGCCATCGGTTGAGAAGAAAGATGCTGGCGAAAGATCTG
AGGGAGGCACGGAAAAAGGTGCAAGAATTGGAAGAAAAATTACTGGAGAT
GGAAGTGAAGGAGGAGGGGGCGAGCCCAAAGGGGAATCAACGCCCTGTCC
GTATATGGATGGATGGCTGCTTTGATATGATGCACTATGGACATATGAAC
GCGTTTCGACAGGGTAAGGCTTTGGGGACTTTTTTGGTGGTTGGGGTTAA
CTCAGATGCGACCATTACAGCATGCAAGGGGCCGCCGGTCATGAATGACG
AGGAAAGGCTGGCGGCCGTGGAGGGATGTCGCTTTGTGGATGAGGTAGTC
CCAGATGTACCGTATGTGATGGACGAGGCGTATCTAAAGAGGGTGATGGA
GAAGTATAGGATTGATTTCGTGGTGCATGGCGATGACCCTTGTATTGTGA
ATGGGAGAGATGTCTATGAGGTGCCTCAGAAGATGGGGAAATACCGCACA
ATTCCACGGACAGAGGGGGTGAGCACCACGGATATTGTGGGGAGAATGCT
GTTGATGAGCCGGAGGCATCACCAACGCACAGAGTCTACGGGCTCGCAGA
CGGGGCAATTGGCGTCGGAGAAGAAGATGCCAAAAGGTGGGTCGCAGGGT
AGAGTGGGAGGAGCGGTGGGGGAGGCGGAAGCCCGAGAGCAGCAGTTGCA
GCAGGCACAAGAGGGGGCAGCGTTCTACAGACGGTCTCGATTCTTGACCA
CCTCGAGAATGATCCGTTTGTTCTCCGCCGGCATGCGGGCCGGGCCGCCG
CATCGGGATAGTAAAGTGGTGTACATCGATGGGAGTTGGGACATGTTCCA
CGCGGGGCACATCAAGACACTGAAGAAGATCAAGGAGGGTAATGGAAGTG
GGGGCATCTTTTTGATTGTGGGGGTGCACAATGATCAGGTAAGGAAAGGA
GGAAGGGAGGGAGGGAGGGAGGGGGAGGAGTGTTTATTTTCCTCCTTTTC
TCCGATTTCTGACCTAATTTTTCTCCCTTCCACCCCTCCTCCCTTCCCAC
AGGTGGTGAACGCACAACGAGGCTCCAACTTTCCAATCATGAACCTCCAC
GAGCGTGTCTTGTCCGTGCTAGGCTGCAAATACGTCGATGACGTCCTGAT
TGATGCTCCCTACAAGGTAACACGGGAGATGATCGCCTCCTTGAATCTCT
CCTTGGTCCTGCATGGCGCACACAGGGACGAGAATGACGAGGAGGGTTCA
TGGAAGGGGGATGGTAGGGAGGGGGGGGCGGGCTGCGGGGAGGAGGATCC
GTTTGCAGTGCCGAAGGAGATGGGAATCTTTGGAGATGTGTCATCGGATT
GCGCACTGTCCGTGCGGGAGATCATTTCAAGGATTCAAAAAAACCAGGAG
CTATTTGTGGCGAAGTACAGTAAGAAGAAGGTGGCGGAGGATGAGTATTA
CAATGCACGGTATGCGATTGAGGGGGAGAAGGAGGGAGGGAAGGAGAGGG
AGGGAAGAAATGGGCATTGAGGAGGAGGAGGAGGAAACGGGAAGAGGACG
AGGACGAGGACGAGGGAGGAGGAGGAGAAAGGGGTGCGGTGTGATGCTGA
GAATGGCGTAAGGATCGTCATGATGCACTGCATCCGATGGGGAGAAAGAA
GGAGGGAAACGGGGAAGGCATTGGCTTTCCGGGGTGGAAGGAT
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Coding sequence (CDS) from alignment at chr5:336983..339425+

>NO05G01150.1 ID=NO05G01150.1|Name=NO05G01150.1|organism=Nannochloropsis oceanica|type=CDS|length=1677bp|location=Sequence derived from alignment at chr5:336983..339425+ (Nannochloropsis oceanica)
ATGCCTTCCGTCGTCGAGTCCTGTGATGCAACAGCCGGCGGCTTGAGTCA
AGCCGCCAACGCCAACAACGACAACAACAGAATACAGGCAATGTGGTGCA
TCTTGCAAGCCAAGACTTTGGAAATGCTTGATAGCCCCTATATGCTCAAG
CTCACGAAACGCTTGGCCGTGCTTCTAGAGTCCTTGGGAGTTCCTCCTCC
CTACCCAGAACCAGACCAAATCGCCTTGTGCGTCACCGCTGTGCTCACCA
CCCTCCTCCTCTACTTCTTGCTTTTCGGTAAACGCCATCGGTTGAGAAGA
AAGATGCTGGCGAAAGATCTGAGGGAGGCACGGAAAAAGGTGCAAGAATT
GGAAGAAAAATTACTGGAGATGGAAGTGAAGGAGGAGGGGGCGAGCCCAA
AGGGGAATCAACGCCCTGTCCGTATATGGATGGATGGCTGCTTTGATATG
ATGCACTATGGACATATGAACGCGTTTCGACAGGGTAAGGCTTTGGGGAC
TTTTTTGGTGGTTGGGGTTAACTCAGATGCGACCATTACAGCATGCAAGG
GGCCGCCGGTCATGAATGACGAGGAAAGGCTGGCGGCCGTGGAGGGATGT
CGCTTTGTGGATGAGGTAGTCCCAGATGTACCGTATGTGATGGACGAGGC
GTATCTAAAGAGGGTGATGGAGAAGTATAGGATTGATTTCGTGGTGCATG
GCGATGACCCTTGTATTGTGAATGGGAGAGATGTCTATGAGGTGCCTCAG
AAGATGGGGAAATACCGCACAATTCCACGGACAGAGGGGGTGAGCACCAC
GGATATTGTGGGGAGAATGCTGTTGATGAGCCGGAGGCATCACCAACGCA
CAGAGTCTACGGGCTCGCAGACGGGGCAATTGGCGTCGGAGAAGAAGATG
CCAAAAGGTGGGTCGCAGGGTAGAGTGGGAGGAGCGGTGGGGGAGGCGGA
AGCCCGAGAGCAGCAGTTGCAGCAGGCACAAGAGGGGGCAGCGTTCTACA
GACGGTCTCGATTCTTGACCACCTCGAGAATGATCCGTTTGTTCTCCGCC
GGCATGCGGGCCGGGCCGCCGCATCGGGATAGTAAAGTGGTGTACATCGA
TGGGAGTTGGGACATGTTCCACGCGGGGCACATCAAGACACTGAAGAAGA
TCAAGGAGGGTAATGGAAGTGGGGGCATCTTTTTGATTGTGGGGGTGCAC
AATGATCAGGTGGTGAACGCACAACGAGGCTCCAACTTTCCAATCATGAA
CCTCCACGAGCGTGTCTTGTCCGTGCTAGGCTGCAAATACGTCGATGACG
TCCTGATTGATGCTCCCTACAAGGTAACACGGGAGATGATCGCCTCCTTG
AATCTCTCCTTGGTCCTGCATGGCGCACACAGGGACGAGAATGACGAGGA
GGGTTCATGGAAGGGGGATGGTAGGGAGGGGGGGGCGGGCTGCGGGGAGG
AGGATCCGTTTGCAGTGCCGAAGGAGATGGGAATCTTTGGAGATGTGTCA
TCGGATTGCGCACTGTCCGTGCGGGAGATCATTTCAAGGATTCAAAAAAA
CCAGGAGCTATTTGTGGCGAAGTACAGTAAGAAGAAGGTGGCGGAGGATG
AGTATTACAATGCACGGTATGCGATTGAGGGGGAGAAGGAGGGAGGGAAG
GAGAGGGAGGGAAGAAATGGGCATTGA
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Synonyms
Publications