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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr5 | genome | chr5:148298..152832 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO05G00390.1 vs.
Match: EWM28347.1 (mitochondrial import receptor subunit [Nannochloropsis gaditana]) HSP 1 Score: 215.3 bits (547), Expect = 4.400e-52 Identity = 101/126 (80.16%), Postives = 117/126 (92.86%), Query Frame = 0
Query: 392 MQGKIEEASKELEKAVRLDPTNPLPFINKALIAWQGQDTATARETLQHVIEMDPQYQPAYSFLANLEFKGASTADDSRPAFETIDKGMEICRSKDDLEELAQIKVLALAKLEGARRLGMAAGELMG 518
MQGK+EEA KELEK++RLDP+NP+P INKAL+AWQG+D TARETLQHVIEMDPQYQPAYSFLANL FKG ST +DS+PAFE IDKGM+ICR+KDDLEELAQIKVLA+AKL+GA+RLG+ AG+LMG
Sbjct: 1 MQGKVEEAGKELEKSIRLDPSNPMPHINKALVAWQGEDAVTARETLQHVIEMDPQYQPAYSFLANLLFKGVSTVEDSKPAFEIIDKGMQICRTKDDLEELAQIKVLAMAKLDGAKRLGLTAGDLMG 126
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G00390.1 ID=NO05G00390.1|Name=NO05G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=2300bp ATCAATGATGCGGCTCTCGTTTGTTTTCCATTTGCTTTACCAAAATGACA CCCTTTATGCAACATACCATTTTGCATGATAGACAGAAAGGGCGAGCTGC TTGGGGTTGTCCTCTGAGTGGTAGAATTGCCTCGGGTGGGAAGCCGCCGC ACGGCACATTTTCTAGCCAGAAACGAACATAAAGTTTTGCTATCTTGCCT CCTCCTCCTAATGCTTCGCACCCCTCACATCCCCAATAGCCCTACGACCC GCTCCGTCACAGCAATCATGCCGCCGCCCGCCTCCTCCTCTTCCTCATCG AAGCTGAGCATCAAGACTCTGTTTTGGTCCCTCCTCTTGGCCACCACCAC GGCCTTGCTTGGCCTTGTGTATGTGCGTCCCCGCCTCCGCTTCAATCTCC TTCCCCCCCCCCCAAGGACGAGCCAAAGAAGGATACCACCGAGAAGAATA AGGAGAATGACAAGGTCGAAGGCAGCAATAGCAACAGCAGCCCCGATGTG ACCATCAAGGGCGTGGAGGAGAAGGAGTACGAGGATTGTGGGGCAAAGGC CGTGGACGCCTTCAAAGCCGGAGACTTCATGGAAGCTCTCAACGGCTTCA CCCATGCGCTGGCCCTGGGGAAGGACTTGGGGGGGGTGTCGGCGCAGCAG AAGACCATCTTGTCCAACCGCAGCGCCTGCTATGAGAAACTGGGTCAATA TTCTGCGGCCTTGGACGATTGCGCCTCCATCCTCCGGACAGATCCCAAGA ACAGCAAGGTCCAGAAGCGGAGAGAGCGCATCCTTGGGAAGCTTCTAGAA GGCGAAGAGTTTCAGGCCGCACTGACGGAGCTGATGGTCACCTTCTTACT AGACATGGAGGCGTACAAGCGGCAGGTGCAATGGAACCCATCAGCAGCCC AAACCATGCAGCTCCTCCCTCCTCCTAATCTCGACGAGGTCGCTAAGAAG GCCGCGCGGAAAATGATCCGAGACATGGAGAAGGGCGGCAAGACGCAAGG CCCCAGGGTCCTTCCCTCCACCTACACCATCAAGCAGGTCCTCAACCTCC TTCCGTCCTACCAGACGCTGCGAGGAACGATCAACACGTTGCGGCAGATC GAGCAAATCACCGCCGACCTGGATGCCCTTTCTTCCTCCTCCTCCTCCTC CCCCTCCTCCCGCCTCCTCCTCCTCTTCGAGCGGGCCCTGGCCTTCATGG CAGCTGACAGCTTCAAACGAGGAGACCAGGACCTCACGGAAGCCCTCCGA CTTGTTCGAGAAGAAGGCGCCTCCCTTCCCACCAGCGGAGAGCAGTCTCG CCTCTTGTCCTGGGCGGGCACTTTTCTCCACCTCAAGCACGAACTCGACG AGGCCCGCAAGCTGTTGGAAGAAAGCAGTAGACTGGACCCCTCCTCGGTC GAGGTGTTGATTAAACGCGGTTGCCTCCATCTGGATCGGAGCGAAATGGA GGACGCAAAGGTCCTGTGTGACAGGGCGCGGGAGATGGCTCCTTCAAGTG CCTTTGTCTACTTGTGGCGGTGTCAGCTGTGGATGTGCGGGAAGATGACG GAGGAAGGCTTGAGGGAAGCGGAGAAGGAGCTGACGAAATGCTTGGAGCT CGAGGAGGAGAATGTGGTGGCTCTGACGCGTTTAATGAACATAAAAATGC AGCACAACGACATCGAGGCTGCCGATAAGGCCATCGAAAAGGCCAAAAAG GCGGCTCCTCGCAACGCGGATGTGGTCGGGGCCTACGCGGAATTCCTCCT CATGCAAGGGAAGATCGAAGAGGCCTCCAAGGAATTGGAAAAAGCCGTTA GACTCGACCCCACCAACCCCCTGCCCTTCATCAACAAAGCCCTCATCGCT TGGCAAGGCCAAGACACGGCCACGGCACGAGAAACACTCCAGCATGTGAT TGAAATGGACCCCCAGTACCAACCCGCCTACTCCTTCCTCGCCAATTTGG AGTTTAAAGGCGCGAGCACAGCGGACGACAGTCGGCCGGCGTTTGAGACG ATTGACAAGGGCATGGAAATTTGTCGGTCAAAAGACGATTTGGAGGAGCT CGCGCAGATTAAGGTGCTGGCGTTGGCCAAGCTCGAGGGAGCGAGACGGC TGGGGATGGCGGCGGGAGAATTGATGGGGTAGGAAGGGAGGGAGGGAGGA GTCGACGGGCATAATAATGCAACAAGAGGACGGTGAGGATGGATGGATGG ATGAAGAATAAAAGGGGCTGAGAGTTCTCCTGTGAGGGAGGGTGGGTCAG TATACATCAAAGAATAACCACAAGACGAGCAAGAAACGCAAAACCGGCAG back to topprotein sequence of NO05G00390.1 >NO05G00390.1-protein ID=NO05G00390.1-protein|Name=NO05G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=518bp MEALNGFTHALALGKDLGGVSAQQKTILSNRSACYEKLGQYSAALDDCAS ILRTDPKNSKVQKRRERILGKLLEGEEFQAALTELMVTFLLDMEAYKRQV QWNPSAAQTMQLLPPPNLDEVAKKAARKMIRDMEKGGKTQGPRVLPSTYT IKQVLNLLPSYQTLRGTINTLRQIEQITADLDALSSSSSSSPSSRLLLLF ERALAFMAADSFKRGDQDLTEALRLVREEGASLPTSGEQSRLLSWAGTFL HLKHELDEARKLLEESSRLDPSSVEVLIKRGCLHLDRSEMEDAKVLCDRA REMAPSSAFVYLWRCQLWMCGKMTEEGLREAEKELTKCLELEEENVVALT RLMNIKMQHNDIEAADKAIEKAKKAAPRNADVVGAYAEFLLMQGKIEEAS KELEKAVRLDPTNPLPFINKALIAWQGQDTATARETLQHVIEMDPQYQPA YSFLANLEFKGASTADDSRPAFETIDKGMEICRSKDDLEELAQIKVLALA KLEGARRLGMAAGELMG* back to topmRNA from alignment at chr5:148298..152832+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G00390.1 ID=NO05G00390.1|Name=NO05G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=4535bp|location=Sequence derived from alignment at chr5:148298..152832+ (Nannochloropsis oceanica) ATCAATGATGCGGCTCTCGTTTGTTTTCCATTTGCTTTACCAAAATGACA
CCCTTTATGCAACATACCATTTTGCATGATAGACAGAAAGGGCGAGCTGC
TTGGGGTTGTCCTCTGAGTGGTAGAATTGCCTCGGGTGGGAAGCCGCCGC
ACGGCACATTTTCTAGCCAGAAACGAACATAAAGTTTTGCTATCTTGCCT
CCTCCTCCTAATGCTTCGCACCCCTCACATCCCCAATAGCCCTACGACCC
GCTCCGTCACAGCAATCATGCCGCCGCCCGCCTCCTCCTCTTCCTCATCG
AAGCTGAGCATCAAGACTCTGTTTTGGTCCCTCCTCTTGGCCACCACCAC
GGCCTTGCTTGGCCTTGTGTATGTGCGTCCCCGCCTCCGCTTCAATCTCC
TTCCCCCCCCCCCAAGGACGAGCCAAAGAAGGATACCACCGAGAAGAATA
AGGAGAATGACAAGGTACAGCAGGACGGGTGTTTTGGTGTAGTGTGTGGG
AGAGGATGCGGTAGAAATCGCACATACCATTTGTACACGAACCTCCCCAC
CCGCTGGGCCCTACGATCTTCCCACTTAATCCAATTCCCGTCAGTCAAAT
CTCCTCTCCTCAGACACATGAGGGTAGATAGCATTTAAAGGTTTATAACA
AGAGAGTAGACAGTATGTGGAGATTTATAACGACGGTGTGTCTCATACGT
TGATCTGTTTCTCCACAGGTCGAAGGCAGCAATAGCAACAGCAGCCCCGA
TGTGACCATCAAGGGCGTGGAGGAGAAGGAGTACGAGGATTGTGGGGCAA
AGGTACGTTTATGCATTAAAAGAAGAAGAGGAGGAGGGGTAATGAAAAGG
AAAAAGAAGGGGGTACGGGTGGATATGCCAGAAGGAGGAGGGAAAGGGAC
ATGTATTCTGTTGTCGAGCAAGCACATGGTTCACCGGCATCCCTCCCTCC
CTCCCTGCCGCAGGCCGTGGACGCCTTCAAAGCCGGAGACTTCATGGAAG
CTCTCAACGGCTTCACCCATGCGCTGGCCCTGGGGAAGGACTTGGGGGGG
GTGTCGGCGCAGCAGAAGACCATCTTGTCCAACCGCAGCGCCTGCTATGA
GAAGTGAGTGCCCTCCCTTCCTCCATGCATCCATCCATTCATCCCTCCCT
CCGTCCTTTTCCGAGGAGATGTATGTGTTCCTCCCTCCCTCGCAATAGGA
GCCCTCCCTCATGACCCCTTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCAGACTGGGTCAATATTCTGCGGCCTTGGACGATTGCGCCTCCATCCT
CCGGACAGATCCCAAGAACAGCAAGGTCCAGAAGCGGAGAGAGGTGAGGG
AGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAA
GGAGGGAGGGAAGAACACATTCCTTCTATTTTATTTACTTACAAGCTCTC
CTTCTCGCAGCGCATCCTTGGGAAGCTTCTAGAAGGCGAAGAGTTTCAGG
CCGCACTGACGGAGCTGATGGTCACCTTCTTACTAGACATGGAGGCGTAC
AAGCGGCAGGTAACGAGCAAGGGAGGGAGGGAGGGAGGGAGGGAGGTTTT
CTCACGTTCACTCACTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCCAGGTGCAATGGAACCCATCAGCAGCCCAAACC
ATGCAGCTCCTCCCTCCTCCTAATCTCGACGAGGTCGCTAAGAAGGCCGC
GCGGAAAATGATCCGAGACATGGAGAAGGTACGCCCTCCCTCCCTCCCTC
CCTCTCATCCGCGTGGTGCAGGGAGTGATGTTGCGATTTCCCTCCCTCTT
TCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCTGATACCCTCATACCCTC
CCTCACTCCTTCCCTCCCTCTCTCCCCCCTCTCTCCCTTCCTCCCTCCCT
CCACCTAGGGCGGCAAGACGCAAGGCCCCAGGGTCCTTCCCTCCACCTAC
ACCATCAAGCAGGTCCTCAACCTCCTTCCGTCCTACCAGACGCTGCGAGG
AACGATCAACACGTTGCGGCAGGTAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGGCAGACAGACTAAATTCCCTCAAGGTACGTCACATTCTCAAACG
CCGCTTCCCCTCCCTCCCCCCCCCCTCCCTCCCTCCAGATCGAGCAAATC
ACCGCCGACCTGGATGCCCTTTCTTCCTCCTCCTCCTCCTCCCCCTCCTC
CCGCCTCCTCCTCCTCTTCGAGCGGGCCCTGGCCTTCATGGCAGCTGACA
GCTTCAAACGAGGAGACCAGGACCTCACGGAAGCCCTCCGACTTGTTCGA
GAAGAAGGTATCGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTGGCCTTGTTGCCATGATTCATCTCCCTTCCCTCCTTCCATCTCTCC
CTCCCTCCCTCCCTAGGCGCCTCCCTTCCCACCAGCGGAGAGCAGTCTCG
CCTCTTGTCCTGGGCGGGCACTTTTCTCCACCTCAAGCACGAACTCGACG
AGGCCCGCAAGGTACGCCCTCCCTCCCTTCCTGCCCTCCTCCCTCCCTCC
CTCTCTCCCCCGCATGCCTCAATCTTCCCTTCATTCCCTCATCCCCCCCT
TCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCAGCTGTTGGAAGAAA
GCAGTAGACTGGACCCCTCCTCGGTCGAGGTGTTGATTAAACGCGGTTGC
CTCCATCTGGATCGGAGCGAAATGGAGGTATGTCTACCTCTCCCTCCCCC
CCTCCCTCCCTCCCTCCCGGGAGGACTCATCCCACCATCTGGATGAGAAC
GAAGGAGAGATTTGTCTATGTTTGCGGCTCCTTCCATCCCCCCCTCCTTC
CCTCCCTCCCTCCCTCCCCTCCTTCCACAAGTGCGTTTGCATAGTCACCC
CGCGTTCCCCTCCCTCCCTCCTTTCCTCCCTCCCTCCCTCCCTCCTTTCC
TCCCTCCCTCGTGTAAGGACGCAAAGGTCCTGTGTGACAGGGCGCGGGAG
ATGGCTCCTTCAAGTGCCTTTGTCTACTTGTGGCGGTGTCAGCTGTGGAT
GTGCGGGAAGATGACGGAGGAAGGTGAGGAACGAAAGGAGGGAGGGAGGG
AGAGAGGGAGGGAGGGAGGGAAGGCGGGAGGGAGGGAGGGAGGGAGGGAA
GGGGTAGGGTCAAGAAAGAGAAAATACCGTCTGGAGGTAAGATCGTTTTG
CACGTCTCATCCTCCCTTCCTTCCTCCCTCCCTCCCTCCCTCCTTTTCTC
CCACCCTCCCTCGCTCCCACCCTCCCTCCCTCCCTCTAGGCTTGAGGGAA
GCGGAGAAGGAGCTGACGAAATGCTTGGAGCTCGAGGAGGAGAATGTGGT
GGCTCTGACGCGTTTAATGAACATAAAAATGCAGCACAACGACATCGAGG
CTGCCGATAAGGCCATCGAAAAGGCAAGCCCTCTCTCCCTCCCTTCCTCC
CTTCCTCCCTCCCTCCCTCCATTACATTTGACCGTGAACGTAACGCCGAG
ACAAGACGCCCACTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCAGGCCAAAAAGGCGGCTCCTCGCAACGC
GGATGTGGTCGGGGCCTACGCGGAATTCCTCCTCATGCAAGGGAAGATCG
AAGAGGCCTCCAAGGAATTGGAAAAAGCCGTTAGACTCGACCCCACCAAC
CCCCTGCCCTTCATCAACAAAGTAAACGCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCT
CTCTTTCACAACGACCCTCACCCTCCGTCCGTCTTTCTCGTTCTCCCTCC
CTCTCTCCCTTCCTCCCTCAGGCCCTCATCGCTTGGCAAGGCCAAGACAC
GGCCACGGCACGAGAAACACTCCAGCATGTGATTGAAATGGACCCCCAGT
ACCAACCCGCCTACTCCTTCCTCGCCAATTTGGAGTTTAAAGGCGCGAGC
ACAGCGGACGACAGTCGGCCGGCGTTTGAGACGATTGACAAGGGTGAGGA
AGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGAC
GGACGGATGGAAAGGAAGACACCGATCTACCTTTTGGCAAGCGCCTCCTC
TCACTGCTCCCTCCCTCCCTCCTTTCCTCCCTCCCTTCCTCTCAGGCATG
GAAATTTGTCGGTCAAAAGACGATTTGGAGGAGCTCGCGCAGATTAAGGT
GCTGGCGTTGGCCAAGCTCGAGGGAGCGAGACGGCTGGGGATGGCGGCGG
GAGAATTGATGGGGTAGGAAGGGAGGGAGGGAGGAGTCGACGGGCATAAT
AATGCAACAAGAGGACGGTGAGGATGGATGGATGGATGAAGAATAAAAGG
GGCTGAGAGTTCTCCTGTGAGGGAGGGTGGGTCAGTATACATCAAAGAAT
AACCACAAGACGAGCAAGAAACGCAAAACCGGCAG back to topCoding sequence (CDS) from alignment at chr5:148298..152832+ >NO05G00390.1 ID=NO05G00390.1|Name=NO05G00390.1|organism=Nannochloropsis oceanica|type=CDS|length=1554bp|location=Sequence derived from alignment at chr5:148298..152832+ (Nannochloropsis oceanica) ATGGAAGCTCTCAACGGCTTCACCCATGCGCTGGCCCTGGGGAAGGACTT GGGGGGGGTGTCGGCGCAGCAGAAGACCATCTTGTCCAACCGCAGCGCCT GCTATGAGAAACTGGGTCAATATTCTGCGGCCTTGGACGATTGCGCCTCC ATCCTCCGGACAGATCCCAAGAACAGCAAGGTCCAGAAGCGGAGAGAGCG CATCCTTGGGAAGCTTCTAGAAGGCGAAGAGTTTCAGGCCGCACTGACGG AGCTGATGGTCACCTTCTTACTAGACATGGAGGCGTACAAGCGGCAGGTG CAATGGAACCCATCAGCAGCCCAAACCATGCAGCTCCTCCCTCCTCCTAA TCTCGACGAGGTCGCTAAGAAGGCCGCGCGGAAAATGATCCGAGACATGG AGAAGGGCGGCAAGACGCAAGGCCCCAGGGTCCTTCCCTCCACCTACACC ATCAAGCAGGTCCTCAACCTCCTTCCGTCCTACCAGACGCTGCGAGGAAC GATCAACACGTTGCGGCAGATCGAGCAAATCACCGCCGACCTGGATGCCC TTTCTTCCTCCTCCTCCTCCTCCCCCTCCTCCCGCCTCCTCCTCCTCTTC GAGCGGGCCCTGGCCTTCATGGCAGCTGACAGCTTCAAACGAGGAGACCA GGACCTCACGGAAGCCCTCCGACTTGTTCGAGAAGAAGGCGCCTCCCTTC CCACCAGCGGAGAGCAGTCTCGCCTCTTGTCCTGGGCGGGCACTTTTCTC CACCTCAAGCACGAACTCGACGAGGCCCGCAAGCTGTTGGAAGAAAGCAG TAGACTGGACCCCTCCTCGGTCGAGGTGTTGATTAAACGCGGTTGCCTCC ATCTGGATCGGAGCGAAATGGAGGACGCAAAGGTCCTGTGTGACAGGGCG CGGGAGATGGCTCCTTCAAGTGCCTTTGTCTACTTGTGGCGGTGTCAGCT GTGGATGTGCGGGAAGATGACGGAGGAAGGCTTGAGGGAAGCGGAGAAGG AGCTGACGAAATGCTTGGAGCTCGAGGAGGAGAATGTGGTGGCTCTGACG CGTTTAATGAACATAAAAATGCAGCACAACGACATCGAGGCTGCCGATAA GGCCATCGAAAAGGCCAAAAAGGCGGCTCCTCGCAACGCGGATGTGGTCG GGGCCTACGCGGAATTCCTCCTCATGCAAGGGAAGATCGAAGAGGCCTCC AAGGAATTGGAAAAAGCCGTTAGACTCGACCCCACCAACCCCCTGCCCTT CATCAACAAAGCCCTCATCGCTTGGCAAGGCCAAGACACGGCCACGGCAC GAGAAACACTCCAGCATGTGATTGAAATGGACCCCCAGTACCAACCCGCC TACTCCTTCCTCGCCAATTTGGAGTTTAAAGGCGCGAGCACAGCGGACGA CAGTCGGCCGGCGTTTGAGACGATTGACAAGGGCATGGAAATTTGTCGGT CAAAAGACGATTTGGAGGAGCTCGCGCAGATTAAGGTGCTGGCGTTGGCC AAGCTCGAGGGAGCGAGACGGCTGGGGATGGCGGCGGGAGAATTGATGGG GTAG back to top
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