NO05G00090.1, NO05G00090.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G00090.1
Unique NameNO05G00090.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4676
Alignment locationchr5:36600..43819 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:36600..43819 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G00090.1 vs.
Match: EWM28394.1 (glycoside hydrolase family 8 [Nannochloropsis gaditana])

HSP 1 Score: 771.5 bits (1991), Expect = 1.400e-219
Identity = 356/440 (80.91%), Postives = 398/440 (90.45%), Query Frame = 0
Query:    1 MRVLTSSSALLLSAALLVASTALASQSLRGHAAAD-EKATGKFKPFFLPYTNTSAIPRVDQDYHDSLKATWEGLKARNIDAYDVKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFSLQLDNAEKHMWNYRHFHDWRVNEQGSVQATGAATDAEQDIALACIFAQHLVDKGVWESHRTPQGATYGERAQQILDAMWDTGMIQDGKFLAPAAGWGGRDFVNPGYFAPAFYKIFKDFDANAYKHDWTAVVDQCYASILANVGEDKGLIPDWMTPAGTFYGQGLGYNAYLDGRGFYKDAIRTLWRLATDAIWFDDERAKTFLGKAHTFLQSKGGPEEANFFTMEGEPVSMNDYWDFDNYRRKRHRFEHSHLTTGMWATAGFVAAGPKKAKPYSDELISFWEGGDFWGHTVDPAGGTEDIAHNELYFDQFLAWFGASMIGG 440
            MR+ T  + +LL+AA+L  + ++A QSLRG  A    KA GK+KPFFLPY+NTS IPRVD DYHDSLKATWEGLKARNID YD+KLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYF++QLDNAE++MWN+R+FHDWR+NEQGS+Q TGAATDAE+DIALACIFAQHLVDKGVWE H TP+GA+YG+RAQ+ILDAMWD GMIQDGKFLAPAAGWGGRDFVNPGYFAPA+YKIF +FDANA +HDW AVVDQ Y SILANVG DKGLIPDWMTPAGTFY QGLGYNAYLDGRGFYKDAIRT WRLATDA+WF+DERAK FL KA+TFL+ KGGP+EANFFTMEGEPV M D+WDFDN +R+RHRFEHSHLT GMWAT GFVAAGPK++KPYSDEL+SF+EGGD+WGH +DPAGGTEDI HNE+YFDQFLAWFGAS I G
Sbjct:    1 MRLQTLPATVLLTAAVLGVTESVAQQSLRGMTATPANKAGGKYKPFFLPYSNTSGIPRVDADYHDSLKATWEGLKARNIDPYDIKLVHRPRSETPNDAVSEGVGYGLLLALYSNDQEYFNMQLDNAERYMWNWRNFHDWRINEQGSIQGTGAATDAEEDIALACIFAQHLVDKGVWEPHTTPKGASYGKRAQEILDAMWDVGMIQDGKFLAPAAGWGGRDFVNPGYFAPAWYKIFAEFDANADRHDWKAVVDQSYESILANVGSDKGLIPDWMTPAGTFYYQGLGYNAYLDGRGFYKDAIRTHWRLATDALWFNDERAKEFLAKAYTFLEGKGGPKEANFFTMEGEPVPMTDFWDFDNNQRRRHRFEHSHLTMGMWATTGFVAAGPKESKPYSDELLSFYEGGDYWGHKIDPAGGTEDIEHNEMYFDQFLAWFGASTISG 440          
The following BLAST results are available for this feature:
BLAST of NO05G00090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28394.11.400e-21980.91glycoside hydrolase family 8 [Nannochloropsis gadi... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00090NO05G00090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G00090.1NO05G00090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G00090.1.cds1NO05G00090.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds2NO05G00090.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds3NO05G00090.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds4NO05G00090.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds5NO05G00090.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds6NO05G00090.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds7NO05G00090.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds8NO05G00090.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds9NO05G00090.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds10NO05G00090.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds11NO05G00090.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds12NO05G00090.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds13NO05G00090.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds14NO05G00090.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G00090.1.cds15NO05G00090.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G00090.1 ID=NO05G00090.1|Name=NO05G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=4676bp
CTACAGAAAATACACAATGCGAGTTCTCACCTCGTCCTCTGCTCTACTGC
TAAGTGCAGCTCTGCTCGTTGCCTCGACGGCCTTGGCCTCGCAGTCCCTG
CGTGGCCATGCGGCAGCAGATGAGAAGGCCACGGGGAAATTTAAGCCTTT
CTTCTTGCCATACACCAATACCAGTGCCATTCCCCGAGTCGACCAGGACT
ACCATGATTCCCTGAAGGCCACGTGGGAGGGGCTCAAGGCCCGCAACATT
GACGCCTATGACGTGAAGCTCGTCCACCGGCCTCGCTCAGAGACTCCCAA
CGATGCCGTGTCTGAGGGTGTGGGCTACGGGCTGCTCCTGGCCCTCTACT
CGAACGACCAGGAGTACTTCAGCCTTCAGCTGGACAACGCCGAGAAGCAC
ATGTGGAACTACCGGCACTTCCACGACTGGCGAGTGAACGAGCAAGGGTC
TGTGCAGGCCACGGGGGCCGCCACAGACGCGGAGCAAGATATTGCCCTGG
CCTGCATCTTCGCCCAGCACCTGGTGGACAAGGGCGTGTGGGAGTCTCAC
CGCACTCCCCAGGGCGCCACATACGGCGAGCGGGCCCAGCAAATTTTGGA
CGCCATGTGGGACACGGGAATGATCCAGGACGGGAAGTTCCTGGCCCCTG
CCGCCGGGTGGGGCGGGCGCGATTTCGTCAACCCTGGGTACTTTGCTCCG
GCATTCTACAAGATCTTCAAGGACTTTGATGCCAACGCCTACAAACACGA
CTGGACGGCCGTCGTCGACCAGTGTTATGCCTCGATCCTGGCTAATGTGG
GCGAGGACAAGGGGCTCATTCCCGACTGGATGACGCCCGCTGGGACCTTC
TACGGACAGGGCCTGGGCTACAACGCCTACCTCGACGGGCGCGGCTTCTA
CAAGGATGCGATCCGCACCCTCTGGCGCCTGGCCACCGACGCCATCTGGT
TCGATGACGAGCGCGCCAAAACGTTTCTGGGCAAGGCCCACACCTTTCTC
CAGTCCAAGGGCGGGCCCGAGGAGGCCAACTTTTTCACTATGGAAGGCGA
GCCCGTGTCCATGAACGACTATTGGGATTTCGACAACTATCGCCGCAAGC
GCCACCGCTTCGAACACTCCCACCTCACCACCGGCATGTGGGCGACTGCC
GGTTTCGTCGCCGCGGGTCCTAAGAAGGCCAAGCCCTACTCCGACGAGCT
CATCTCCTTCTGGGAAGGCGGAGATTTTTGGGGACACACCGTCGATCCCG
CAGGCGGCACGGAGGACATTGCACACAACGAACTCTACTTCGACCAATTT
TTGGCCTGGTTCGGCGCCTCGATGATCGGCGGGTACTTTGTGGATATCCG
CAAGCACATTTAAAGCAAGGGAGGGAGGGAAGGAAGGAAGCAAAGAAGGA
GGGAGGGATGGGACGGAGGGATGGACGTCACTCAAAAGGAGCAGCGCGAT
GGCGTCCGTTGTACTAGATGAAGTGACCGGTAAAAGCAGAAAGAGAGGGT
TTCTTTCTCATGTTAAGGAGTGTAGCTGTAGCTTGGAGGGAGTGCGAGGG
AGAGGGAGAGAGAGGGAGGGAAGGCGTTGCAATGCGGATGTTTTTAGGGA
TAGGCGTTCACAACTGCTCGAGAAAAGGAGTTGATAGTAGAAGAAGAAGC
AGAGGGACGAGAGAAGAAGAAGATGAAGAGGAGGAGGAGGAGGAGGATAT
TAAACGAAAACAAGGAGTGAGAAATGAGGAAGACCCCCCCCAAAAAAAAC
AGAAATTGGTAGCTATAGACATATGAACAATTGTAGCCTTGTCACAAATA
ATTGCCTGCACAGAGTGTTTTCTTTCTTTTGTAATAATCACATAGCATTC
AATAGACTTCGATGAATACATCCAAAGGTCGACTCTCGGGGGCAGCCGAG
GCAATGCAATCAGAACAGCAAAGTGACACTGGAGCGAGCAAGTTCACACA
TACACCACACAACACAAACACACACCCTAGATAATCATGAAAGTGCAACT
CTTGACGCGTGGCGAATGAAATTTGAAAGCATTTAAACTGAAAACAGTCG
TAGAGGACGCATACACACAAGCATCCGTCAATCTCACAATCCATAATTAT
CGTAGTAAGCGACTCCCAATGACCTTAAAACATCATTTAGCTAAACGGTT
TTTTGAAAGTTAGGAAAGGAAATAAAAATTAACGCCACAACACACACACG
ACAGACATACAAAATACATCCTTACGGAGATACGCATTCCGTTGCGTTAC
GCAGGGAAGATTGGGCATCCACTCTCAAAACAGAAGGACTTGATGCACGC
ACACATAAACATATAAGAGAAAAGAAGCATGACACACTCGTAATCCATAA
ATACTCGTAGACTCTCTTGAGAGCGGGTCAAGCCGAAGCTTCATTGCCAC
GCAGGGCACCCCTTCTAGGTGGTTGATCCAGGAGTAGGAGCGGGGGTAGG
AGCACCAGGCGTACAGATGTACTTGCTTGTCCTCTTTCCAACTTTCTCTG
TGCACTTTGTGTTGGTGCTCACGTAAGGGGAGAAATCAATGGAGATGCCA
GCAGAAAGAGGCGTCAATATAGTGGCGTTAATGAACTCCTGACGGCGGAA
AACACCCGAAAGCATGTAATAGGAGGATGTGGTTGTGTTGTGGCTCCTCT
GCGCCTGAATTGTGGCGCCCTTCGGAACCCTTTTGGTCGTCTTGATCAAG
AGGCGGGTGCCCGTAGTCTTGCAAACAAGTCCTTTGTCGTTGTTGAGCAA
TCTGCACTCAATCGGTCTGTATGGAACCATATTGAGGGTGTTTTGGTCCT
TGTCTGCAATCCCTGCGATCACTCCAAAATCACTGATGCCATCCACAACT
GTCCCGTCAGGGTCGTTGAAGAAGCCCTTCATACTCCACAGGTCCTTGTT
CGCCCTATGTGCGCTGACTGCCCTGATGGAGGTGAGAGTTATCTCATTTT
GAGCCGCCGTAACGGCGAGGGTAATACCGAGGGCAAGCAGAGAAAAAATG
CGTTGCATGATGCAAACGTACGTTTACACGAAATGCCTGTTTGCAGTGAT
GTTGTGAAGTGTAAAATGGAGGTAGGTGACTTCTTTGACTGATTCTTAAG
AGGGCTGTCAGGTAAAGAGAGCCTTCAATATCTACTTAGGAAGCACAATC
TGGGACCAAGAAGGGGTACGTTGAAGACAGCGCTCAGTATCTACTAAGTA
AGCACTATCTATGACGAGGTAAAATGAAGAGGTGACAGGAATTATTTGTT
TGTGTCACTCTGTGCGCCAAGTGTCTCGTGCAGACATTTGGGTATGGGTG
CGAGTAGGGGCGATGGGGAGGCGCAGAACATTCAGGGATAAATGACATGG
AAGGGAGAAACGGGTAAGGTTTACGAGGAAGGGGGGGGCGGGCACGTAGG
AGACGAGGTGCATACTTTCATATAAGTGTTACATCTGGTTTGAATTTCGT
TTTCTAACAGGTATAATCTCAATTTTTCAGGACTTCCACAAACACATAAC
ATGAACTGATGAACTACGACGGCCCCGCTCGGGAAGGAATAAGAGGATGA
CACGAAAGTGGTGTTAAGGAGAGGAATGAAGAGAAATTTGAAAGGAGGAA
TGGAGGGGGATGTGGATGGGGGGAAGGAGGGGCCTGCAATCTTTTGCGAA
TATAGCTCGCGGTTTTCGAAGATAAGCAGGAAGAGTGCTAAAAAGAAAAA
GAGGAGAGGGGAAGGGGGAGGGGAAGAAAATGTGAAGAAGAGGGAAAAAG
GACAGGAGGAGAGAGGGAAGATGGTAGGTAAAGGAAGAAGAGAGAAGGGA
GTGTGGAGGGAAGAGTGAGGAGGGAAGAGGAGGAAGGGGAAGGAGGCGTG
CGGGTTCGTGTGCATGCGTCGCAAATCAGTCATGCCTTCCGACAGCTGCT
GGCTATTGTTTAGGCTACCCAAGTACCAGGGGCGAGACCGGCACTTACGC
ATCGAACACAATATCAGCAGACCGGTGGGTCAGTGGGGTGTGGGAGAGTG
CTGTGGGTGATGTGCTGCATGTGGTCTGATTTTTGGTTCTTAGAGGAGGA
ACGTATAGGTGAAAAAGAAAAGTGTCGAGACAAGAGATGGGACGGGAGGG
GGCGCGCAAATGTCAGACGCCGATAGCGATGCACCTGCCTGTGGTGGCAA
AAGGCGAAAGGGATAGGCATGTCTCTCTTCCTAACCCACAGGCCAATAAG
GCTGCAAGTACGTGCTGGAAACAGCGGCAAGGTCAGAGGCAGAAGGGCAA
AAGACGGCCCGGGTTGTGAAAGGGGGGGATAACATATGGTAGAGGTCTGC
CAGCAGACCCTGGCTGAGACGGCTGCGCTATGGGCCCAACGGTAATTCAT
AAATTCATACATAGCACAGTAGCTATGCGCAGACAAACATGCAATCGACG
TCGATCTAAACACCTCAAACATCTAGACGGCACTGCTCGAAGGAGAGGAA
AAGTTCGACTTCTCCGTCCTAGTAATGCGGTAAATATGGAGAGCGAGGGC
GAGCCGTCGCAGAAAAAAAACAACAACTAAGTTAGTTCACGTCTGCAAAG
AGTTGAGTGCCAGGGCCCCTAAAACAACATTGTTACATTGCACAGAGAGA
ACAGACACTTAAGAGGAGGGCTAAGAAAGCAAATACTCACCAAAAACCAG
CAGGTGGATGAAACTGCTTCTGAAAG
back to top

protein sequence of NO05G00090.1

>NO05G00090.1-protein ID=NO05G00090.1-protein|Name=NO05G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bp
MRVLTSSSALLLSAALLVASTALASQSLRGHAAADEKATGKFKPFFLPYT
NTSAIPRVDQDYHDSLKATWEGLKARNIDAYDVKLVHRPRSETPNDAVSE
GVGYGLLLALYSNDQEYFSLQLDNAEKHMWNYRHFHDWRVNEQGSVQATG
AATDAEQDIALACIFAQHLVDKGVWESHRTPQGATYGERAQQILDAMWDT
GMIQDGKFLAPAAGWGGRDFVNPGYFAPAFYKIFKDFDANAYKHDWTAVV
DQCYASILANVGEDKGLIPDWMTPAGTFYGQGLGYNAYLDGRGFYKDAIR
TLWRLATDAIWFDDERAKTFLGKAHTFLQSKGGPEEANFFTMEGEPVSMN
DYWDFDNYRRKRHRFEHSHLTTGMWATAGFVAAGPKKAKPYSDELISFWE
GGDFWGHTVDPAGGTEDIAHNELYFDQFLAWFGASMIGGYFVDIRKHI*
back to top

mRNA from alignment at chr5:36600..43819+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G00090.1 ID=NO05G00090.1|Name=NO05G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=7220bp|location=Sequence derived from alignment at chr5:36600..43819+ (Nannochloropsis oceanica)
CTACAGAAAATACACAATGCGAGTTCTCACCTCGTCCTCTGCTCTACTGC TAAGTGCAGGTAAGCACTGTATTTGCCTTCCTTGCCTAGCCCTGTAACGT GCGTGAGCTGTTACACCACTACTTCTTGCCGGTTCCACACACCCTGTCAT CGATCCCCTCCCCCGTGTATGTCTCGCGTCCACCCAGTATAGTATAGGAT AGAAGCTTTATTTCCTCTGCATCGGTTCCCAGCCATCCACGTCGCTCTCG CTCAATCTCCCTTTCTCGCTCGCTCCCTTCCTCCCTCCTCTCCTCTCAGC TCTGCTCGTTGCCTCGACGGCCTTGGCCTCGCAGTCCCTGCGTGGCCATG CGGCAGCAGATGAGAAGGCCACGGGGAAATTTAAGCCTTTCTTCTTGCCA TACACCAATACCAGTGCCATTCCCCGAGGTAGGGAGAGAGGAAGGGAGAA AGGGAGTGTAACGTCCGAGGGAGGGAGTGTAACGCGTCCGTGCGCGGGTT GCTGTGAAGAGCAAAAGGACGACGGCCTGGCTTGCTACCTATTAGTCTAC AGGATATTCAAGAGACTCCCTTTCGTCCTGTCTCTCCTTTACTCACCTAC CTGCTTCCCTTTTTCCCCTTTCCTCAGTCGACCAGGACTACCATGATTCC CTGAAGGCCACGTGGGAGGGGCTCAAGGCCCGCAACATTGACGCCTATGA CGTGAAGCTCGTCCACCGGCCTCGCTCAGAGACTCCCAACGATGCCGTGT CTGAGGTACGAAACAGTGAGGGTCCATTCATAGGATGGAGGCACTCTGGG GGCTCCAAGCTCCTCCTGAACGTCGAGAGAGGACGTGCCGGGGGTAGCAC GAGGGAGGGAGGGAGGGAGGGAGGTAAGAGTGCTACTTACTCGCTGGGAT TCATCACATCCCTATACACCTATTCGCCCTCCCCCTCCATACCTCTTTCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGGTGTGGGCTACGGGCTGC TCCTGGCCCTCTACTCGAACGACCAGGAGTACTTCAGCCTTCAGCTGGAC AACGCCGAGAAGCACATGTGGAACTACCGGCAGTACGTCCTCCCTCCCTG CCCACCGAAATTTCCTTCCACTCCCCTTCTTGCCCACCGCTTGGCCCCTC CGTCCTCCCCGGCCGAGACACGGATGAAGCCACAGACCAGATCCCTTCCT GTCGCCTGCGCCGATACCTAATCCCTCCCTCCTTCCTTCCCTCCTTCCCT CCCTCCCTCCCAGCTTCCACGACTGGCGAGTGAACGAGCAAGGGTCTGTG CAGGCCACGGGGGCCGCCACAGACGCGGAGCAAGATATTGCCCTGGCCTG CATCTTCGCCCAGCACCTGGTGGACAAGGGTGAGGGCGGAGGGAGGGAGG GAGGGAGGGAGGGAGGAGGGGAGGGAGGAGGGGTTGCAGTGTCCAACCCA TTGCTTCCTCCCTCCCTCCCTCCCTTCAAAGAGATGTGGGAGAGTCTCAC CGCATCGCCCAAGCCGCCACCTACGGCCTACACGCACCACAGACACACGT CTCACTCCCTTCTCTTCCTCCCTCTCTCCCTCCCTCGTGACAGGCGTGTG GGAGTCTCACCGCACTCCCCAGGGCGCCACATACGGCGAGCGGGCCCAGC AAATTTTGGACGCCATGTGGGACACGGGAATGATCCAGGACGGGAAGTAA GTGGAGAGGCGGGAGGGAGGGAAAGAGGGAGGGGCGGTGTCGCTCTTGGC TGAGGAAAATGGAAGCTTGGGCTTCCTCTCTGCCCGCATTACCTTGTCTG CTTCGCCTTCCTTCGCACACCCAACACCGAATTTCCATACCCCTCCCTCC CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGCCCCCTGCCTAGGT TCCTGGCCCCTGCCGCCGGGTGGGGCGGGCGCGATTTCGTCAACCCTGGG TACTTTGCTCCGGCATTCTACAAGATCTTCAAGGCAGGGAGGGAGGGAGG GGGATCGGGAAGGAGGAAAGGAGGGAGGGAGTAGGCATGATTCTATGAGT GCTGATATTGCTCTCCCTCTCTGTTCTCTTTCGCGCCTTGTAGGACTTTG ATGCCAACGCCTACAAACACGACTGGACGGCCGTCGTCGACCAGGTCCGT CCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCATTCGTCCACGCTGA CCTTCCTTCCCTCCCCCTTCCCCCCTACTCCCTGACTGCTCACAGTGTTA TGCCTCGATCCTGGCTAATGTGGGCGAGGACAAGGGGCTCATTCCCGACT GGATGACGCCCGCTGGGACCTTCTACGGACAGGTGCATCCTCCCTCCCTC CCTCCCTTCCCTTCCCTTCCTCCCTCCCTTCCCTCCCTCCTTCCTTCCGA GCCATCGCATCACATCACATGCTCACTCTCTCCCTTCCCTCCCTTCCCTC CCTTCCCTCCCTTCCTCCTTCCCTCCCTGCTCCAGGGCCTGGGCTACAAC GCCTACCTCGACGGGCGCGGCTTCTACAAGGATGCGATCCGCACCCTCTG GCGCCTGGCCACCGACGCCATCTGGTTCGATGTACGTCATCCTCCCTCCC TCCCTCGCTCTTCCCCTCTTTCCCTCTTTCCCTCCTTCGCTCCTTCCCTC CCTTCCTCTTTTGAAGCGCTGCGGAACTCGTCACCTCCTTTCCTCCCTCC CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGACGAGCGCGCCAAAAC GTTTCTGGGCAAGGCCCACACCTTTCTCCAGTCCAAGGGCGGGCCCGAGG AGGCCAACTTTTTCACTATGGAAGGTACGTCCCGCCTCCTCTCCTCCCCT TCCTCCATCCCTTTCTCTGCCCCTTCCCTATTCGGGCCCTCCCCTCCTAC CCTCTCTCCCTGCATCGTGCCTCCGTCCCTTCCTCTTTGAGAACGAAACT ACTCGCGAACTACCCTACACGCTCTCCTCCTTCCCTCCCTCCCTCTCTTC TCTGTGTTCCAGGCGAGCCCGTGTCCATGAACGACTATTGGGATTTCGAC AACTATCGCCGCAAGCGCCACCGCTTCGAACACTCCCACCTCACCACCGG CATGTGGGCGACTGCCGGTACGCCATTCGCTTCCCCCCCTCCTTTCTTCC TTCCTTCCTCCCTCCCTCCCTTCCTTACCTTCAGACCTCATTGCCTTGTT CTGACCTCAATCCCCCCCTCTGGTCCTCCGTCTTTCTCCCCCTCCCGCCC TCCCTCCCTCCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCCTT TCTCTTTCTCCCTCCTCTCTTCTCTATATCTCTCTCATTTTCTCTCTCTC TCTCTCTTTCTCTCCCTCTCTCTCTCCCTCCCTCTCTCTCTCCAGGTTTC GTCGCCGCGGGTCCTAAGAAGGCCAAGCCCTACTCCGACGAGCTCATCTC CTTCTGGGAAGGCGGAGATTTTTGGGGACACACCGTCGATCCCGCAGTAC GTACTCCCTCCTTCCCTCCCTCCCTTCCTCTCTCCCCCCCTCGTTTTGCT TTCCTCTCCCTCCTTTCTGCTGATCGGATTCTCAGGCCCCATCCGCTCTC CCTCTTTCCCTCTTTCCGTCCTTCCCTCCCTTCCTCTGTAGGGCGGCACG GAGGACATTGCACACAACGAACTCTACTTCGACCAATTTTTGGCCTGGTT CGGCGGTAAGGCGGAAAGAAGGGAGGGGGGAGGAAGGTCAGGCGGGCGCG CGGACAGGCGGGAAGAGGGGACATGGAATGGAAGGACGCCCTCGTAATTA CTTTCATTCATGCCGCGTTTCCTCCCTCCCTCATTTCCTCCTTCCCTCCC CTTCGAACAGCCTCGATGATCGGCGGGTACTTTGTGGATATCCGCAAGCA CATTTAAAGCAAGGGAGGGAGGGAAGGAAGGAAGCAAAGAAGGAGGGAGG GATGGGACGGAGGGATGGACGTCACTCAAAAGGAGCAGCGCGATGGCGTC CGTTGTACTAGATGAAGTGACCGGTAAAAGCAGAAAGAGAGGGTTTCTTT CTCATGTTAAGGAGTGTAGCTGTAGCTTGGAGGGAGTGCGAGGGAGAGGG AGAGAGAGGGAGGGAAGGCGTTGCAATGCGGATGTTTTTAGGGATAGGCG TTCACAACTGCTCGAGAAAAGGAGTTGATAGTAGAAGAAGAAGCAGAGGG ACGAGAGAAGAAGAAGATGAAGAGGAGGAGGAGGAGGAGGATATTAAACG AAAACAAGGAGTGAGAAATGAGGAAGACCCCCCCCAAAAAAAACAGAAAT TGGTAGCTATAGACATATGAACAATTGTAGCCTTGTCACAAATAATTGCC TGCACAGAGTGTTTTCTTTCTTTTGTAATAATCACATAGCATTCAATAGA CTTCGATGAATACATCCAAAGGTCGACTCTCGGGGGCAGCCGAGGCAATG CAATCAGAACAGCAAAGTGACACTGGAGCGAGCAAGTTCACACATACACC ACACAACACAAACACACACCCTAGATAATCATGAAAGTGCAACTCTTGAC GCGTGGCGAATGAAATTTGAAAGCATTTAAACTGAAAACAGTCGTAGAGG ACGCATACACACAAGCATCCGTCAATCTCACAATCCATAATTATCGTAGT AAGCGACTCCCAATGACCTTAAAACATCATTTAGCTAAACGGTTTTTTGA AAGTTAGGAAAGGAAATAAAAATTAACGCCACAACACACACACGACAGAC ATACAAAATACATCCTTACGGAGATACGCATTCCGTTGCGTTACGCAGGG AAGATTGGGCATCCACTCTCAAAACAGAAGGACTTGATGCACGCACACAT AAACATATAAGAGAAAAGAAGCATGACACACTCGTAATCCATAAATACTC GTAGACTCTCTTGAGAGCGGGTCAAGCCGAAGCTTCATTGCCACGCAGGG CACCCCTTCTAGGTGGTTGATCCAGGAGTAGGAGCGGGGGTAGGAGCACC AGGCGTACAGATGTACTTGCTTGTCCTCTTTCCAACTTTCTCTGTGCACT TTGTGTTGGTGCTCACGTAAGGGGAGAAATCAATGGAGATGCCAGCAGAA AGAGGCGTCAATATAGTGGCGTTAATGAACTCCTGACGGCGGAAAACACC CGAAAGCATGTAATAGGAGGATGTGGTTGTGTTGTGGCTCCTCTGCGCCT GAATTGTGGCGCCCTTCGGAACCCTTTTGGTCGTCTTGATCAAGAGGCGG GTGCCCGTAGTCTTGCAAACAAGTCCTTTGTCGTTGTTGAGCAATCTGCA CTCAATCGGTCTGTATGGAACCATATTGAGGGTGTTTTGGTCCTTGTCTG CAATCCCTGCGATCACTCCAAAATCACTGATGCCATCCACAACTGTCCCG TCAGGGTCGTTGAAGAAGCCCTTCATACTCCACAGGTCCTTGTTCGCCCT ATGTGCGCTGACTGCCCTGATGGAGGTGAGAGTTATCTCATTTTGAGCCG CCGTAACGGCGAGGGTAATACCGAGGGCAAGCAGAGAAAAAATGCGTTGC ATGATGCAAACGTACGTTTACACGAAATGCCTGTTTGCAGTGATGTTGTG AAGTGTAAAATGGAGGTAGGTGACTTCTTTGACTGATTCTTAAGAGGGCT GTCAGGTAAAGAGAGCCTTCAATATCTACTTAGGAAGCACAATCTGGGAC CAAGAAGGGGTACGTTGAAGACAGCGCTCAGTATCTACTAAGTAAGCACT ATCTATGACGAGGTAAAATGAAGAGGTGACAGGAATTATTTGTTTGTGTC ACTCTGTGCGCCAAGTGTCTCGTGCAGACATTTGGGTATGGGTGCGAGTA GGGGCGATGGGGAGGCGCAGAACATTCAGGGATAAATGACATGGAAGGGA GAAACGGGTAAGGTTTACGAGGAAGGGGGGGGCGGGCACGTAGGAGACGA GGTGCATACTTTCATATAAGTGTTACATCTGGTTTGAATTTCGTTTTCTA ACAGGTATAATCTCAATTTTTCAGGACTTCCACAAACACATAACATGAAC TGATGAACTACGACGGCCCCGCTCGGGAAGGAATAAGAGGATGACACGAA AGTGGTGTTAAGGAGAGGAATGAAGAGAAATTTGAAAGGAGGAATGGAGG GGGATGTGGATGGGGGGAAGGAGGGGCCTGCAATCTTTTGCGAATATAGC TCGCGGTTTTCGAAGATAAGCAGGAAGAGTGCTAAAAAGAAAAAGAGGAG AGGGGAAGGGGGAGGGGAAGAAAATGTGAAGAAGAGGGAAAAAGGACAGG AGGAGAGAGGGAAGATGGTAGGTAAAGGAAGAAGAGAGAAGGGAGTGTGG AGGGAAGAGTGAGGAGGGAAGAGGAGGAAGGGGAAGGAGGCGTGCGGGTT CGTGTGCATGCGTCGCAAATCAGTCATGCCTTCCGACAGCTGCTGGCTAT TGTTTAGGCTACCCAAGTACCAGGGGCGAGACCGGCACTTACGCATCGAA CACAATATCAGCAGACCGGTGGGTCAGTGGGGTGTGGGAGAGTGCTGTGG GTGATGTGCTGCATGTGGTCTGATTTTTGGTTCTTAGAGGAGGAACGTAT AGGTGAAAAAGAAAAGTGTCGAGACAAGAGATGGGACGGGAGGGGGCGCG CAAATGTCAGACGCCGATAGCGATGCACCTGCCTGTGGTGGCAAAAGGCG AAAGGGATAGGCATGTCTCTCTTCCTAACCCACAGGCCAATAAGGCTGCA AGTACGTGCTGGAAACAGCGGCAAGGTCAGAGGCAGAAGGGCAAAAGACG GCCCGGGTTGTGAAAGGGGGGGATAACATATGGTAGAGGTCTGCCAGCAG ACCCTGGCTGAGACGGCTGCGCTATGGGCCCAACGGTAATTCATAAATTC ATACATAGCACAGTAGCTATGCGCAGACAAACATGCAATCGACGTCGATC TAAACACCTCAAACATCTAGACGGCACTGCTCGAAGGAGAGGAAAAGTTC GACTTCTCCGTCCTAGTAATGCGGTAAATATGGAGAGCGAGGGCGAGCCG TCGCAGAAAAAAAACAACAACTAAGTTAGTTCACGTCTGCAAAGAGTTGA GTGCCAGGGCCCCTAAAACAACATTGTTACATTGCACAGAGAGAACAGAC ACTTAAGAGGAGGGCTAAGAAAGCAAATACTCACCAAAAACCAGCAGGTG GATGAAACTGCTTCTGAAAG
back to top

Coding sequence (CDS) from alignment at chr5:36600..43819+

>NO05G00090.1 ID=NO05G00090.1|Name=NO05G00090.1|organism=Nannochloropsis oceanica|type=CDS|length=1347bp|location=Sequence derived from alignment at chr5:36600..43819+ (Nannochloropsis oceanica)
ATGCGAGTTCTCACCTCGTCCTCTGCTCTACTGCTAAGTGCAGCTCTGCT
CGTTGCCTCGACGGCCTTGGCCTCGCAGTCCCTGCGTGGCCATGCGGCAG
CAGATGAGAAGGCCACGGGGAAATTTAAGCCTTTCTTCTTGCCATACACC
AATACCAGTGCCATTCCCCGAGTCGACCAGGACTACCATGATTCCCTGAA
GGCCACGTGGGAGGGGCTCAAGGCCCGCAACATTGACGCCTATGACGTGA
AGCTCGTCCACCGGCCTCGCTCAGAGACTCCCAACGATGCCGTGTCTGAG
GGTGTGGGCTACGGGCTGCTCCTGGCCCTCTACTCGAACGACCAGGAGTA
CTTCAGCCTTCAGCTGGACAACGCCGAGAAGCACATGTGGAACTACCGGC
ACTTCCACGACTGGCGAGTGAACGAGCAAGGGTCTGTGCAGGCCACGGGG
GCCGCCACAGACGCGGAGCAAGATATTGCCCTGGCCTGCATCTTCGCCCA
GCACCTGGTGGACAAGGGCGTGTGGGAGTCTCACCGCACTCCCCAGGGCG
CCACATACGGCGAGCGGGCCCAGCAAATTTTGGACGCCATGTGGGACACG
GGAATGATCCAGGACGGGAAGTTCCTGGCCCCTGCCGCCGGGTGGGGCGG
GCGCGATTTCGTCAACCCTGGGTACTTTGCTCCGGCATTCTACAAGATCT
TCAAGGACTTTGATGCCAACGCCTACAAACACGACTGGACGGCCGTCGTC
GACCAGTGTTATGCCTCGATCCTGGCTAATGTGGGCGAGGACAAGGGGCT
CATTCCCGACTGGATGACGCCCGCTGGGACCTTCTACGGACAGGGCCTGG
GCTACAACGCCTACCTCGACGGGCGCGGCTTCTACAAGGATGCGATCCGC
ACCCTCTGGCGCCTGGCCACCGACGCCATCTGGTTCGATGACGAGCGCGC
CAAAACGTTTCTGGGCAAGGCCCACACCTTTCTCCAGTCCAAGGGCGGGC
CCGAGGAGGCCAACTTTTTCACTATGGAAGGCGAGCCCGTGTCCATGAAC
GACTATTGGGATTTCGACAACTATCGCCGCAAGCGCCACCGCTTCGAACA
CTCCCACCTCACCACCGGCATGTGGGCGACTGCCGGTTTCGTCGCCGCGG
GTCCTAAGAAGGCCAAGCCCTACTCCGACGAGCTCATCTCCTTCTGGGAA
GGCGGAGATTTTTGGGGACACACCGTCGATCCCGCAGGCGGCACGGAGGA
CATTGCACACAACGAACTCTACTTCGACCAATTTTTGGCCTGGTTCGGCG
CCTCGATGATCGGCGGGTACTTTGTGGATATCCGCAAGCACATTTAA
back to top
Synonyms
Publications