NO04G04990.1, NO04G04990.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G04990.1
Unique Name	NO04G04990.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3123
Alignment location	chr4:1382325..1389018 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:1382325..1389018 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO04G04990.1 vs.
Match: EWM28894.1 (conserved oligomeric golgi complex subunit 3 [Nannochloropsis gaditana])

HSP 1 Score: 505.8 bits (1301), Expect = 3.100e-139
Identity = 291/443 (65.69%), Postives = 340/443 (76.75%), Query Frame = 0

Query:  549 NLVYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYWEAKLGGREGG----KEGGKE---SKKEGEREEKKKGGALTTGDGSIGAVLPLYATWFPTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGDLDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRKMFRVGADNALYSLAVDSVPTVNEEEIDSKKRLEDSLKVACNTFIEHATTHLAEPLQTLLQKSHAFLPSSSSS-SSPSSSTP--DAASLLTLSTQSFLQPDRVQATFLSAHERLATSTPHLLHLMSLYLDYNSSTKAILFRPVRQRVLSLLQQLAELLKLL--------PVPSSSEERTEATYEGEREGSGLLETVEGMLLSMKQTLNKFTEANVDGPIDGRGSRSNSAANSPVR 974
            NL  L DVL+RIA+DAQERLIY +ERVLRVEVEGFRPTP+DLEYP KLE YWEAK  G+EGG    KEGG+E   + KEGE   + + G      G +G VLP+YATWFPTL+MTL+LLSKIYRAVE+HVFQ+MAQQALAAC  S LA AKVLRE+KGD+DADLFLVKHLLILREQLVPFDIEFAAIEKRLDF STRGALTRFFVD   +FR+G DNAL SLA+ SVPTVNEEE+D++K LE SLK ACN FI HAT+HLAEP+ TLLQK+ AFLP+SSS+ S PSSS P  D  +L TLS Q+FLQP R++AT L AHE L T+ P L HL+SLYLD+N +TKAILFRPVRQR+L+LLQQL +LL LL         +    E   E   E E++  GL E +EG+L  M Q++NK  E  ++  +DG GSRS SAANSP R
Sbjct:    2 NLSPLRDVLERIAEDAQERLIYVAERVLRVEVEGFRPTPADLEYPGKLEAYWEAKRRGQEGGSQEGKEGGEEEGTAGKEGEGAAEAEEGMQALSSGGMGKVLPVYATWFPTLQMTLSLLSKIYRAVELHVFQEMAQQALAACTYSFLAAAKVLREQKGDMDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFNSTRGALTRFFVDRHNLFRMGTDNALLSLALGSVPTVNEEEVDTRKELEASLKSACNAFILHATSHLAEPIATLLQKARAFLPTSSSNPSPPSSSLPYIDPTTLQTLSAQAFLQPARLEATLLEAHEGLLTALPALSHLLSLYLDHN-NTKAILFRPVRQRILTLLQQLRDLLGLLFHTSTDVVKIEGGKEGGAEGRVEAEKKERGLPEAIEGLLTGMTQSINKVFEGELEHWMDGSGSRSASAANSPTR 443

The following BLAST results are available for this feature:

BLAST of NO04G04990.1 vs.

BLAST of NO04G04990.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28894.1	3.100e-139	65.69	conserved oligomeric golgi complex subunit 3 [Nann...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G04990	NO04G04990	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04990.1	NO04G04990.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04990.1.cds1	NO04G04990.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds2	NO04G04990.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds3	NO04G04990.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds4	NO04G04990.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds5	NO04G04990.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds6	NO04G04990.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds7	NO04G04990.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds8	NO04G04990.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds9	NO04G04990.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds10	NO04G04990.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds11	NO04G04990.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds12	NO04G04990.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds13	NO04G04990.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds14	NO04G04990.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds15	NO04G04990.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds16	NO04G04990.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04990.1.cds17	NO04G04990.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:1382325..1389018+
coding sequence from alignment at chr4:1382325..1389018+

mRNA sequence

>NO04G04990.1 ID=NO04G04990.1|Name=NO04G04990.1|organism=Nannochloropsis oceanica|type=mRNA|length=3123bp
ACAGGAAAGAATCGAAGCTGCTGCAGCACCAAGACACGCGGGAGCAGCAA
GTGTAGCGACAGTAATTGATGTCGTCCTCTTCCTCCTCTCCCTCCTCCCA
CTCCTCGGCCTGGGAAGCCTCCCTCCCCACGACCGACTCGCAACTCCAGC
GTCTTGCCATCCTGGATGCCCACATCAAGGATTTGTTTCTCATCGACAAG
GAAGAGGACGAAGATAAGCAATCCACCGTCACCAATGATTACTCCCCGTC
GTTTCCCCAAGGCAAGAGCGAGCAGCCTACAACGATGTGGGCAGGCGCCA
ACCGCGGCCGGATCGAGGAATTCTTGAGGAGCCTCGAATCAGAGAGCGAA
GGTGGCATCGAAGGCAGGAAGGAAGGCATGACGGAAGCGGCAGGGACGTA
TGTGTCGACATTGGCGGCGTACGAGGAGGGCTTAACTGTGGTCACTGAAA
AAGTGGAGGCGTCGTTGGCTTCCCTCAACGACATCGAAGCTCTCTATCAC
GCTGTAGCCCAGCGGGCCGAATCTCTACACGGCACTTGTCAGCGATTGAT
TTCAGAGCAGCACTCCCTCGAGCAGCGCAAGTCCCTGTTGGCGGGGCCAA
TGGAATTCTTCGACGAGCTCGAACGCCTGGGACCCCTCTTGGGGATTGGG
GGAACCGCTGCTGTTGGTGGTGGTGGTGGTGGTGGGGCAGGGGGAGGGGG
AGGGAAGGGAGGGAAGCCCATGTCCTTGCCGGGACGAGGTGTGGTAGTAT
CGGGGGGAGGAGGGAGTGGAGGGCTGCTGTTCACTTCGAGGGCTTCTCCG
GGTAGTGGGGAATTCGCTGAGGTGCTGGCGAGGGTCGATCAGGCCATTGC
CTTCTTTGAGAGTCACCCGCAGTACAAGGACAGTGGTGCTTACCTGACGA
AGATGCGTGCTCTGCAGCTCCGAGGCCTTGGACTGGTTAAGACTCAGGTC
CTCCATCTCCTGGAGAGCGGGACGGCCAAGACGGCTGCAGCTCGGAAGAA
GAAGAGCAAGCACGCGCAGGAGCACTTGGAGACATCGCCCCTCTACACCC
AATTTAGATCCTTCTCTGAGCGTGTGCGGGAACTGGTCCACCTCATCGAT
GCCCGTGCTGGAGGGAGGGAGGGAAGACAGGGTGGACACGAGGAGGAGGG
CGAGCACTCCGCCCGCCTGGAGGAGCTCCTCGATGACTGCCGCAAGAGCT
ACACCCACAAGCGATGGACTCTCCTGAAGCCCTTCCTCAAAACGCACTTC
GAGGCCGCTGTCGCTGCCTGCTCCCCCTCCCGAAAAAGAGGGGAGGGAGG
AGGAGGGAGGGGGGGAGGAAGGGGGGGAGGAGATGCACCTGCTTTGGCCC
GGACGGGCGCTGTGGTGCTCGCTCGCATCTGTCAGCTGGAGTCGCAGCTC
TACAATGACTTCTTCGGTCCTCCCTCCCCCGCACGACCCGAGGAGGAGGA
GGAGGACGAGGACGCCACCCCCCTCCACACTACCTCCTCCTCCTCCTCCT
CCTCCAGCGTCCCTCGTCCGTATCGATCGTCCTCACAAGAGTATTATGAG
AGCGGCGCCCTCTCTCAGTTGCTCCGCGGTTTGTGCCTGCTTCTCCACGA
TGTCCTCCGGCCACTGGTCATTCAAGAGGGTGACCTCGACCGTCTCTGCA
CGCTCATCAATGCCGTGCGAGAGGAGATTTTGCAGGGCCAGACACTCTTG
CGAGGCGATGCCAATCTAGTCTATCTGGAAGACGTATTGGATCGAATTGC
CAAGGATGCCCAAGAGCGGCTCATTTACGCCTCAGAGCGGGTTCTGCGGG
TGGAAGTAGAGGGCTTTCGACCCACTCCCTCGGACTTAGAATACCCGGAG
AAGCTCGAGGAGTACTGGGAAGCCAAGCTAGGAGGGAGGGAGGGGGGGAA
GGAGGGAGGGAAGGAGAGCAAAAAGGAGGGGGAAAGGGAGGAGAAGAAGA
AAGGAGGGGCGTTGACGACGGGTGATGGCAGCATCGGCGCCGTCCTCCCT
CTCTACGCCACTTGGTTCCCTACCCTCCGCATGACCCTCACCCTCCTCAG
CAAGATTTATCGGGCCGTTGAAATCCACGTCTTTCAAGACATGGCGCAGC
AGGCGCTGGCGGCCTGCAACGAGTCGCTGCTGGCGGGGGCCAAAGTCCTG
AGGGAGAGAAAAGGAGACCTGGACGCCGATCTCTTCCTAGTCAAACACCT
CCTCATCCTCCGGGAGCAGCTCGTGCCCTTCGACATCGAATTTGCGGCCA
TCGAGAAGCGACTGGATTTCAAGTCTACGCGAGGCGCCTTGACTCGCTTC
TTCGTGGATACCCGGAAGATGTTCCGAGTCGGCGCAGACAATGCCCTCTA
CTCCCTGGCCGTCGACTCGGTGCCCACCGTGAATGAGGAGGAGATCGACT
CCAAGAAACGGCTGGAGGACTCCCTCAAGGTGGCTTGCAACACCTTCATC
GAGCACGCCACCACCCACCTAGCCGAGCCCCTCCAAACCCTCCTGCAAAA
ATCTCATGCCTTCCTCCCTTCCTCCTCTTCCTCCTCCTCCCCATCTTCAT
CCACTCCCGATGCCGCCTCCCTCCTCACCCTATCCACGCAGTCTTTCCTT
CAACCTGACCGTGTCCAGGCTACCTTTCTCTCCGCCCACGAACGCCTAGC
CACCTCCACCCCCCACCTCCTCCATCTCATGTCCCTTTATCTCGATTATA
ACAGCAGCACCAAAGCCATTTTATTCCGGCCAGTGCGTCAACGTGTGCTG
AGCCTATTGCAGCAGCTGGCAGAATTGCTCAAGCTACTGCCCGTGCCGTC
GTCCTCCGAAGAGAGGACGGAGGCGACGTACGAGGGAGAGAGGGAGGGAT
CAGGTTTATTGGAGACGGTGGAAGGGATGCTCCTAAGCATGAAGCAGACT
TTGAATAAGTTCACAGAGGCAAACGTGGATGGACCTATCGATGGGAGGGG
AAGTCGGAGCAACAGCGCAGCGAATTCCCCGGTGCGACAGGGAATGCAAG
AGGTAGGAGATGGAAACAGTGTGGTGGCATCGAATTGAGATGATAAATAT
GCACATGCATGCATGGACAGAGGATACTTTACCATTAGTTGACGTGCTTT
GTGCAAAAGAAAAATTAATGAGT

protein sequence of NO04G04990.1

>NO04G04990.1-protein ID=NO04G04990.1-protein|Name=NO04G04990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=990bp
MSSSSSSPSSHSSAWEASLPTTDSQLQRLAILDAHIKDLFLIDKEEDEDK
QSTVTNDYSPSFPQGKSEQPTTMWAGANRGRIEEFLRSLESESEGGIEGR
KEGMTEAAGTYVSTLAAYEEGLTVVTEKVEASLASLNDIEALYHAVAQRA
ESLHGTCQRLISEQHSLEQRKSLLAGPMEFFDELERLGPLLGIGGTAAVG
GGGGGGAGGGGGKGGKPMSLPGRGVVVSGGGGSGGLLFTSRASPGSGEFA
EVLARVDQAIAFFESHPQYKDSGAYLTKMRALQLRGLGLVKTQVLHLLES
GTAKTAAARKKKSKHAQEHLETSPLYTQFRSFSERVRELVHLIDARAGGR
EGRQGGHEEEGEHSARLEELLDDCRKSYTHKRWTLLKPFLKTHFEAAVAA
CSPSRKRGEGGGGRGGGRGGGDAPALARTGAVVLARICQLESQLYNDFFG
PPSPARPEEEEEDEDATPLHTTSSSSSSSSVPRPYRSSSQEYYESGALSQ
LLRGLCLLLHDVLRPLVIQEGDLDRLCTLINAVREEILQGQTLLRGDANL
VYLEDVLDRIAKDAQERLIYASERVLRVEVEGFRPTPSDLEYPEKLEEYW
EAKLGGREGGKEGGKESKKEGEREEKKKGGALTTGDGSIGAVLPLYATWF
PTLRMTLTLLSKIYRAVEIHVFQDMAQQALAACNESLLAGAKVLRERKGD
LDADLFLVKHLLILREQLVPFDIEFAAIEKRLDFKSTRGALTRFFVDTRK
MFRVGADNALYSLAVDSVPTVNEEEIDSKKRLEDSLKVACNTFIEHATTH
LAEPLQTLLQKSHAFLPSSSSSSSPSSSTPDAASLLTLSTQSFLQPDRVQ
ATFLSAHERLATSTPHLLHLMSLYLDYNSSTKAILFRPVRQRVLSLLQQL
AELLKLLPVPSSSEERTEATYEGEREGSGLLETVEGMLLSMKQTLNKFTE
ANVDGPIDGRGSRSNSAANSPVRQGMQEVGDGNSVVASN*

mRNA from alignment at chr4:1382325..1389018+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G04990.1 ID=NO04G04990.1|Name=NO04G04990.1|organism=Nannochloropsis oceanica|type=mRNA|length=6694bp|location=Sequence derived from alignment at chr4:1382325..1389018+ (Nannochloropsis oceanica)
ACAGGAAAGAATCGAAGCTGCTGCAGCACCAAGACACGCGGGAGCAGCAA
GTGTAGCGACAGTAATTGATGTCGTCCTCTTCCTCCTCTCCCTCCTCCCA
CTCCTCGGCCTGGGAAGCCTCCCTCCCCACGACCGACTCGCAACTCCAGC
GTCTTGCCATCCTGGATGCCCACATCAAGGATTTGTTTCTCATCGACAAG
GAAGAGGACGAAGATAAGCAATCCACCGTCACCAATGATTACTCCCCGTC
GTTTCCCCAAGGCAAGAGCGAGCAGCCTACAACGATGTGGGCAGGCGCCA
ACCGCGGCCGGATCGAGGAATTCTTGAGGAGGTAAGCGCAGGAGAAAAGG
CAAAGAGGAAGAGAGACAGCAGAAACTAGGTGGAAAACACGAAGGGAGTG
AAGGGGAATACCATGGATCAGACGCATTGAGGCACGGTCATAATTCACCG
CCAGATTGATCGTCATGGGCCTGTTGAGATTATGACTCTCCCACCACCCA
CTGCCCCCTTACAGCCTCGAATCAGAGAGCGAAGGTGGCATCGAAGGCAG
GAAGGAAGGCATGACGGAAGCGGCAGGGACGTATGTGTCGACATTGGCGG
CGTACGAGGAGGGCTTAACTGTGGTCACTGAAAAAGTAAGGAAGGAGGGG
AGGAAGCGAAGGAGAGATGGGAGGGCGGCGGATGGAACGAAAGGAGGTAA
AAATGCAAAGACCGCCTCAGAGCCGACAAGTATCCAAAATTTTTGTATCA
TGCGCTCTCATTGCACCCATCTCCTCCCTCTTTCCCCCCCTCCCTTCCCT
CCCTCCCTGCCCAGGTGGAGGCGTCGTTGGCTTCCCTCAACGACATCGAA
GCTCTCTATCACGCTGTAGCCCAGCGGGCCGAATCTCTACACGGCACTTG
TCAGCGATTGATTTCAGAGCAGGTAGAGAAGGAGGGAGGGAGGAAGGGAT
GGACCGTGCCTTTTCTCAACAAATGGATTGATTCACCGCTTGCACAAACC
CCTTCCTCCCTCCCTCCATCCCTCCCTTCCTCCAGCACTCCCTCGAGCAG
CGCAAGTCCCTGTTGGCGGGGCCAATGGAATTCTTCGACGAGCTCGAACG
CCTGGGACCCCTCTTGGGGATTGGGGGAACCGCTGCTGTTGGTGGTGGTG
GTGGTGGTGGGGCAGGGGGAGGGGGAGGGAAGGGAGGGAAGCCCATGTCC
TTGCCGGGACGAGGTGTGGTAGTATCGGGGGGAGGAGGGAGTGGAGGGCT
GCTGTTCACTTCGAGGGCTTCTCCGGGTAGTGGGGAATTCGCTGAGGTGC
TGGCGAGGGTCGATCAGGCCATTGCCTTCTTTGAGAGTCACCCGCAGGTA
GAGAGAGAGAGAGAAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGAGAGGGAGGGAGGGTGGAAAGGCGTTGCCTTTGTTGTCC
CCTTTTGTCCATCCACTCACGTTCGCGTCTCCCCCCCTCTTTCCCCTCTT
CCCTCCCTCCCTCCTTCCCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTTCCTCCCTCTCTCCCTCCCTCCCTCCCTCAGTACAA
GGACAGTGGTGCTTACCTGACGAAGATGCGTGCTCTGCAGCTCCGAGGCC
TTGGACTGGTTAAGACTCAGGTCCTCCATCTCCTGGAGAGCGGGACGGCC
AAGTAGGGAGGGAGGGAGGGAAAGGAGGGAGCGAGGCCAGGACGGAAGGG
AGGAGAAAGGGAAGGATGATGGATGGCGCCCCCACTCAGGCGTATCCCCC
TGGCGGATGCATGGATAGAGGGAGACTGGGAAGGAAGAAAGGGAGGGAGG
AAGGAGCAATGACATCCTTCTTATATATATATATGTATATATATATATTT
ACATATTTTTATATATATATATATATATATATATATATATATATGTAAAA
TATATATATATATATATTTACATATATATATATATATATGTACCTTACAT
CTTTCTCCACCCATGTCTTACACATATGTCTTAGATAAACATGTATTTAT
GCATATAATGGCCTTACACCGTGTGTATACATATACACATACCATCCATG
CATGGAACAGGACGGCTGCAGCTCGGAAGAAGAAGAGCAAGCACGCGCAG
GAGCACTTGGAGACATCGCCCCTCTACACCCAATTTAGGTGCTGCTCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCTTTCCGTGTCCCTGTGGTCAACCC
CCTCGTCACCTGCTCCCCTCATCCTTTCTGACCTCTGCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCCCCTTCTAGATCCTTCTCTGAGCGTGTGCGGGAACTGGTCCACCTCA
TCGATGCCCGTGCTGGAGGGAGGGAGGGAAGACAGGGTGGACACGAGGAG
GAGGGCGAGCACTCCGCCCGCCTGGAGGAGCTCCTCGATGACTGCCGCAA
GGTGATTTATTTATCTTATTCCCTCCCTCCCTCCCTCTTTCCCTCCCTCC
CTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCCCTTCCTTCTGTCCACCCC
TCTCCCCCCCCCAAGGACCCAGCCACCTGATAAGTCTTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCCGTTTCCCCTTCCTTCCATCACCTCTCCCTA
GAGCTACACCCACAAGCGATGGACTCTCCTGAAGCCCTTCCTCAAAACGC
ACTTCGAGGCCGCTGTCGCTGCCTGCTCCCCCTCCCGAAAAAGAGGGGAG
GGAGGAGGAGGGAGGGGGGGAGGAAGGGGGGGAGGAGATGCACCTGCTTT
GGCCCGGACGGGCGCTGTGGTGCTCGCTCGCATCTGTCAGCTGGAGTCGC
AGGTACGTGGGAGGTCCCTCCTTCCCTCCCTTCCTCCCTCCCTTCCTCCC
TCCCTCCCTCCCTCCTTCCCTGCCCCTCTAAACTCCACCCTCTCTTTTTC
TCTTCACTTTTAAATCGCACGGCCAACCCCTCCCTCCCTCTTGCCCCCTT
TCCCGCCCTCCCTCCCTCCTAGCTCTACAATGACTTCTTCGGTCCTCCCT
CCCCCGCACGACCCGAGGAGGAGGAGGAGGACGAGGACGCCACCCCCCTC
CACACTACCTCCTCCTCCTCCTCCTCCTCCAGCGTCCCTCGTCCGTATCG
ATCGTCCTCACAAGAGTATTATGAGAGCGGCGCCCTCTCTCAGTTGCTCC
GCGGTTTGTGCCTGCTTCTCCACGATGTCCTCCGGCCACTGGTCATTCAA
GAGGTAGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCCCTCCTTCCCTCCCT
CCTTCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCTCCCCCCTTC
CTTCACGCGAGCTCCCTGTGAAATCCCTTCCGCCGTTTCACCCTGTCTAA
AAACACTCCGCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTTCCTCCATCAGGGTGACCTCGACCGTCTCTGCACGCTCATCA
ATGCCGTGCGAGAGGAGATTTTGCAGGGCCAGACACTCTTGCGAGGTAGG
TAGGTAGGGAGGTAGGGAGGTAGGGAGGGAGGGAGGGAGGTAGGGAGGTA
GGGAGGGAGGGAGGGACAATTGCCGTCAGGTCTGAAAGTGACGGACAGAC
AAATCTTGAATCATCCTAATTCCACTTTAATCCTCCCTCCGTCCCTCCCT
CCGTCCCTCCCTCCGTCCCTCCCTCCCTCCCTCCAGGCGATGCCAATCTA
GTCTATCTGGAAGACGTATTGGATCGAATTGCCAAGGATGCCCAAGAGCG
GCTCATTTACGCCTCAGAGCGGGTAGGAGGGAGGGAAGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAAAGAGGAAGGGGATCTGCCGCACTTTTT
GCGACATGCATAGTTTCCCATCTGAGCTTCCTCCCTTTCCCCCCCTTCCA
CCCTTCCTCCCCTCCTTTCTCAGGTTCTGCGGGTGGAAGTAGAGGGCTTT
CGACCCACTCCCTCGGACTTAGAATACCCGGAGAAGCTCGAGGAGTACTG
GGAAGCCAAGCTAGGAGGGAGGGAGGGGGGGAAGGAGGGAGGGAAGGAGA
GCAAAAAGGAGGGGGAAAGGGAGGAGAAGAAGAAAGGAGGGGCGTTGACG
ACGGGTGATGGCAGGTAGGGAGGAAGAGAGGGAGGGGGAGGGAGGGAGGG
AGGGGAGGGAGGGAGGGAAGGAGGGGGGAATGAAGGTACACTTATGATTC
CAACGATCTACCCATCGTTTTTCGACTGCTTGTCCTGACATAACCCTCCC
TTCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTCCCTCGCTCCCTCCTTCC
CTTTTCAGCATCGGCGCCGTCCTCCCTCTCTACGCCACTTGGTTCCCTAC
CCTCCGCATGACCCTCACCCTCCTCAGCAAGATTTATCGGGCCGTTGAAA
TCCACGTCTTTCAAGACATGGCGCAGCAGGTAGAGTGCCCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCTCTGCATGAGGAG
GTATAGTGCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
TCCCTCTGCATGATCCTCGCTCTGTGCAGCACGGCGGTTGGGGAGGGAGG
GAGGGGGGAAGGGAGGACAGTCTCATCAAATCATCGCTTAAGACCTGTCA
TCCCAATGCAATGTAATCATAATTTCACATGTCTAATCACTCACATGAAT
ATGATATGAATACGATTATATCCGGATCCGCCTTTGGGGTAGGCGCTGGC
GGCCTGCAACGAGTCGCTGCTGGCGGGGGCCAAAGTCCTGAGGGAGAGAA
AAGGAGACCTGGACGCCGATCTCTTCCTAGTGAGTACTGCCTCCTCTCCC
TCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTC
TTTTCCCTTCACTTTCGAAATTCTACTTCTCTTTCTCCTTTACTCTAAGC
GAGCATGTTTCTCTCTTTCTTTTCTTCTCCTTCCCTTTATACAAATATCT
CTCTTTTCTGCTTTTGACTCTAAACGAGCCGTTGGCCCACACTTTCCTCC
CTCCCTCCCCCCCTTTCTCCCTCCCTCCCTTCCAAGGTCAAACACCTCCT
CATCCTCCGGGAGCAGCTCGTGCCCTTCGACATCGAATTTGCGGCCATCG
AGAAGCGACTGGATTTCAAGTCTACGCGAGGTAAAAAGGGAGTGAGGGGG
GGAGGGATGGAGGGAGGGATGGGGGGAGGGGGGAAGGAAGAAGGACAAGC
TTTTCCGACGTCCATCTTCCTGAGCATTGTCGACGTACTGTCTCCATATA
CTTACTTGTCATATTTCCTTCCTTCCTTCCCTTCCTCCCTCCTTCCCTCC
TTCCCTTCCTTCCTCCAGGCGCCTTGACTCGCTTCTTCGTGGATACCCGG
AAGATGTTCCGAGTCGGCGCAGACAATGCCCTCTACTCCCTGGCCGTCGA
CTCGGTGCCCACCGTGAATGAGGAGGAGGTACGTCACGCATCGGTTGGAT
TCGTTCATTGATCCATCAAACAATATGAGTATAATTACCATTGAAGGCGG
AGAAGATAAATGGCGAGGAGGGCAGGTCTTCGAAGGTTTTTTCCCTCACT
CATCCACTCCAAACACACTTTCCCCTCGTTCCATTTCCCCCCCCTTCGTG
TCCCATTCCTTCCTTCTCGGTAGATCGCTCATCCACTCAATGCCTTCTCT
CCCTCCTGTGTCATTTCTCCATCTCCCTCTTTCTCTCCCTCTTCCTCCCC
TTCCTTCTCGGTAGATCGACTCCAAGAAACGGCTGGAGGACTCCCTCAAG
GTGGCTTGCAACACCTTCATCGAGCACGCCACCACCCACCTAGCCGAGCC
CCTCCAAACCCTCCTGCAAAAATCTCATGCCTTCCTCCCTTCCTCCTCTT
CCTCCTCCTCCCCATCTTCATCCACTCCCGATGCCGCCTCCCTCCTCACC
CTATCCACGCAGTCTTTCCTTCAACCTGACCGTGTCCAGGCTACCTTTCT
CTCCGCCCACGAACGCCTAGCCACCTCCACCCCCCACCTCCTCCATCTCA
TGTCCCTTTATCTCGATTATAACAGCAGCACCAAAGCCATTTTATTCCGG
CCAGTGCGTCAACGTGTGCTGAGCCTATTGCAGCAGCTGGCAGAATTGCT
CAAGCTACTGCCCGTGCCGTCGTCCTCCGAAGAGAGGACGGAGGCGACGT
ACGAGGGAGAGAGGGAGGGATCAGGTTTATTGGAGACGGTGGAAGGGATG
CTCCTAAGCATGAAGCAGACTTTGAATAAGTTCACAGAGGCAAACGTGGA
TGGACCTATCGATGGGAGGGGAAGTCGGAGCAACAGCGCAGCGAATTCCC
CGGTGCGACAGGGAATGCAAGAGGTAGGAGATGGAAACAGTGTGGTGGCA
TCGAATTGAGATGATAAATATGCACATGCATGCATGGACAGAGGATACTT
TACCATTAGTTGACGTGCTTTGTGCAAAAGAAAAATTAATGAGT

Coding sequence (CDS) from alignment at chr4:1382325..1389018+

>NO04G04990.1 ID=NO04G04990.1|Name=NO04G04990.1|organism=Nannochloropsis oceanica|type=CDS|length=2970bp|location=Sequence derived from alignment at chr4:1382325..1389018+ (Nannochloropsis oceanica)
ATGTCGTCCTCTTCCTCCTCTCCCTCCTCCCACTCCTCGGCCTGGGAAGC
CTCCCTCCCCACGACCGACTCGCAACTCCAGCGTCTTGCCATCCTGGATG
CCCACATCAAGGATTTGTTTCTCATCGACAAGGAAGAGGACGAAGATAAG
CAATCCACCGTCACCAATGATTACTCCCCGTCGTTTCCCCAAGGCAAGAG
CGAGCAGCCTACAACGATGTGGGCAGGCGCCAACCGCGGCCGGATCGAGG
AATTCTTGAGGAGCCTCGAATCAGAGAGCGAAGGTGGCATCGAAGGCAGG
AAGGAAGGCATGACGGAAGCGGCAGGGACGTATGTGTCGACATTGGCGGC
GTACGAGGAGGGCTTAACTGTGGTCACTGAAAAAGTGGAGGCGTCGTTGG
CTTCCCTCAACGACATCGAAGCTCTCTATCACGCTGTAGCCCAGCGGGCC
GAATCTCTACACGGCACTTGTCAGCGATTGATTTCAGAGCAGCACTCCCT
CGAGCAGCGCAAGTCCCTGTTGGCGGGGCCAATGGAATTCTTCGACGAGC
TCGAACGCCTGGGACCCCTCTTGGGGATTGGGGGAACCGCTGCTGTTGGT
GGTGGTGGTGGTGGTGGGGCAGGGGGAGGGGGAGGGAAGGGAGGGAAGCC
CATGTCCTTGCCGGGACGAGGTGTGGTAGTATCGGGGGGAGGAGGGAGTG
GAGGGCTGCTGTTCACTTCGAGGGCTTCTCCGGGTAGTGGGGAATTCGCT
GAGGTGCTGGCGAGGGTCGATCAGGCCATTGCCTTCTTTGAGAGTCACCC
GCAGTACAAGGACAGTGGTGCTTACCTGACGAAGATGCGTGCTCTGCAGC
TCCGAGGCCTTGGACTGGTTAAGACTCAGGTCCTCCATCTCCTGGAGAGC
GGGACGGCCAAGACGGCTGCAGCTCGGAAGAAGAAGAGCAAGCACGCGCA
GGAGCACTTGGAGACATCGCCCCTCTACACCCAATTTAGATCCTTCTCTG
AGCGTGTGCGGGAACTGGTCCACCTCATCGATGCCCGTGCTGGAGGGAGG
GAGGGAAGACAGGGTGGACACGAGGAGGAGGGCGAGCACTCCGCCCGCCT
GGAGGAGCTCCTCGATGACTGCCGCAAGAGCTACACCCACAAGCGATGGA
CTCTCCTGAAGCCCTTCCTCAAAACGCACTTCGAGGCCGCTGTCGCTGCC
TGCTCCCCCTCCCGAAAAAGAGGGGAGGGAGGAGGAGGGAGGGGGGGAGG
AAGGGGGGGAGGAGATGCACCTGCTTTGGCCCGGACGGGCGCTGTGGTGC
TCGCTCGCATCTGTCAGCTGGAGTCGCAGCTCTACAATGACTTCTTCGGT
CCTCCCTCCCCCGCACGACCCGAGGAGGAGGAGGAGGACGAGGACGCCAC
CCCCCTCCACACTACCTCCTCCTCCTCCTCCTCCTCCAGCGTCCCTCGTC
CGTATCGATCGTCCTCACAAGAGTATTATGAGAGCGGCGCCCTCTCTCAG
TTGCTCCGCGGTTTGTGCCTGCTTCTCCACGATGTCCTCCGGCCACTGGT
CATTCAAGAGGGTGACCTCGACCGTCTCTGCACGCTCATCAATGCCGTGC
GAGAGGAGATTTTGCAGGGCCAGACACTCTTGCGAGGCGATGCCAATCTA
GTCTATCTGGAAGACGTATTGGATCGAATTGCCAAGGATGCCCAAGAGCG
GCTCATTTACGCCTCAGAGCGGGTTCTGCGGGTGGAAGTAGAGGGCTTTC
GACCCACTCCCTCGGACTTAGAATACCCGGAGAAGCTCGAGGAGTACTGG
GAAGCCAAGCTAGGAGGGAGGGAGGGGGGGAAGGAGGGAGGGAAGGAGAG
CAAAAAGGAGGGGGAAAGGGAGGAGAAGAAGAAAGGAGGGGCGTTGACGA
CGGGTGATGGCAGCATCGGCGCCGTCCTCCCTCTCTACGCCACTTGGTTC
CCTACCCTCCGCATGACCCTCACCCTCCTCAGCAAGATTTATCGGGCCGT
TGAAATCCACGTCTTTCAAGACATGGCGCAGCAGGCGCTGGCGGCCTGCA
ACGAGTCGCTGCTGGCGGGGGCCAAAGTCCTGAGGGAGAGAAAAGGAGAC
CTGGACGCCGATCTCTTCCTAGTCAAACACCTCCTCATCCTCCGGGAGCA
GCTCGTGCCCTTCGACATCGAATTTGCGGCCATCGAGAAGCGACTGGATT
TCAAGTCTACGCGAGGCGCCTTGACTCGCTTCTTCGTGGATACCCGGAAG
ATGTTCCGAGTCGGCGCAGACAATGCCCTCTACTCCCTGGCCGTCGACTC
GGTGCCCACCGTGAATGAGGAGGAGATCGACTCCAAGAAACGGCTGGAGG
ACTCCCTCAAGGTGGCTTGCAACACCTTCATCGAGCACGCCACCACCCAC
CTAGCCGAGCCCCTCCAAACCCTCCTGCAAAAATCTCATGCCTTCCTCCC
TTCCTCCTCTTCCTCCTCCTCCCCATCTTCATCCACTCCCGATGCCGCCT
CCCTCCTCACCCTATCCACGCAGTCTTTCCTTCAACCTGACCGTGTCCAG
GCTACCTTTCTCTCCGCCCACGAACGCCTAGCCACCTCCACCCCCCACCT
CCTCCATCTCATGTCCCTTTATCTCGATTATAACAGCAGCACCAAAGCCA
TTTTATTCCGGCCAGTGCGTCAACGTGTGCTGAGCCTATTGCAGCAGCTG
GCAGAATTGCTCAAGCTACTGCCCGTGCCGTCGTCCTCCGAAGAGAGGAC
GGAGGCGACGTACGAGGGAGAGAGGGAGGGATCAGGTTTATTGGAGACGG
TGGAAGGGATGCTCCTAAGCATGAAGCAGACTTTGAATAAGTTCACAGAG
GCAAACGTGGATGGACCTATCGATGGGAGGGGAAGTCGGAGCAACAGCGC
AGCGAATTCCCCGGTGCGACAGGGAATGCAAGAGGTAGGAGATGGAAACA
GTGTGGTGGCATCGAATTGA

Synonyms

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