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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr4 | genome | chr4:1221165..1226816 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO04G04500.1 vs.
Match: CBJ27535.1 (possible vacuolar protein [Ectocarpus siliculosus]) HSP 1 Score: 250.4 bits (638), Expect = 4.500e-62 Identity = 251/960 (26.15%), Postives = 428/960 (44.58%), Query Frame = 0
Query: 183 KLDLRQRMALTLRNWCMDEDNMALIAREGAIQALAALASRDDSLTRRFCAAAFYSLSHNPNFRAELVQVGACAIIAQVALNTKSPRVALSCAASLCNLSLESGTEPRLAEEGAVGALCTLLLTFSERDIWITSLQGLYNLTCVTESYQGLDRVLKGLFSAYDTPCQEMDPSQVVGRAIANLSVIYRMRLRILEEGLVDVVKRHIFPFADGVLQYNVAVAFHNVACAQTCSSEMINRGVMACIVSLTRPPSKSNSCTSMFISGTVNKDDEEQRILSQQPQQHNLPLLTCLATTLQYLSLEVEARRTTIRDGAVRAILNILEQTSDHTVLE-GCAEALHAFTSFQDSTLLLIKHQTVPALIKLSDTLLASRDPKRRRQRHSVVASFCNLLSAENHHSSVLDYKNCLTCVLRLAECLESGDEDNGCSDDEILLEYLSCLYSNLACGTPRRFHAVMAGLVPRLVQLCDLEAPSAVSINLKARCATALANLMAIATTDGNISSGSLNKSNSSSGEISTTNVVSANKQGDNNNLFLKRMVQDGVVGCLTRLLVAATDEVLLESVTTALALTSFHNDDIK--AEMINQGVVHALIHAVTDEGLRGDK-TQHAAAAIFASLSYSAQHIPHLFDAGILDAIFLLARKEEIATRKRCATVLCNLSFDPHVRNHMVERNVVLLLAQLSNMYSDETQMDCAWCFHNLACSSGSEAEAVARTTLNRDIMVNQGAVGALLMIALVRAVTTKTREVCARALLNLITEETTAKVIDCGITQGLASLCGLDSEVCLKICAQAFWTLSLHPIGRAKIASKRNSMQGLCSLIRSNVITTRTLCGAAVLNLLLLEADTAVLATEAGALGVVKVMCTSGDAAVQIVCAHAVAKIALLAACRAHMPKESIPQAMVLLAQQNQDEATAVAALRALTCLALSHFPLTVLLQAGILHVVMFRVLSSGFLGTDVDSDECSNSHCEL 1139
+L+ + + A TL W DN +A+EGA++A+ L D + R +C+A + P R +LV G +IA +A + V +C +L N++ +G E ++ E+G V L +++ + D GL+NLTCV+E Y ++RVLK L + E+ Q A NL+ + M R++EEG V + I A + A+A H++A ++ + ++++G + + L+ DE+ L L +A TL L +E + I++GA A+ NI + + CA L + + + + + +PA++ L L +S D Q H+++ + C+++ E +H+ +L + L +L L + + E + + N +CG+ + V AG VP I L A +A A N++ N + RMV++GV+ + LL D ++ AL L + D++ +IN+G + ++ D GD T+ + A+ ++LS + L + G L A+ LA ++ AT+ RC NLS + +R MVE VV +L++LS Y ++TQ+ CA NLAC GSE +V G V AL+MIALVR+V+ +T+++CA+ALLNL+ E+T +I+ GI +L LD E ++ CA F LS P GRAK +++++ L L+RS T+ +CG AV NL+ D+ + A AGA+ ++ + G + ++ A A ++ + CR + ++P +V L++ EA A R L LA L G+ ++ G + + DEC E+
Sbjct: 260 ELEAKIQCASTLLAWSTHRDNAQRLAKEGAVEAVLRLCKTDHLILRGYCSAILKQFAATPILREKLVARGGVPVIADMASQCRKEVVQSNCMVALVNITCINGQEAKMVEDGLV--LSMVMIMSEQEDFGRLCATGLFNLTCVSEPYNHIERVLKALVGISSSSSLEV--KQSCASAFCNLADLPSMHARLIEEGAVSTIGS-IARGASTKTRRICAIALHSLAASKQERTNLVSKGSVPVLYGLS--------------------SDED------------LTTLHYVACTLVRLGMEEQGHARMIQEGAASALCNIGMSCAAMPMTSLPCALTLDTLSKNAEYKVTIAEEGCIPAIVTL---LRSSEDVPT--QYHALM-TLCSIVMREENHAPILQ-QGALASILALT-----------AHTNHSVREACALVLFNFSCGSAVQERIVQAGAVP-------------AIIALSAGEGVEVALQRRCAAALCNLACTPAN---------------------------IARMVEEGVIPSIIHLLKTG-DIQCVKYCCAALCLVA---QDVRNCVLIINEGAIPHMLAGAKD----GDMVTKQSCCAVLSTLSSKEECREQLCNCGALPALIQLASMDDEATKLRCVVAFANLSCEYTIRGQMVEGGVVRVLSELSTSYKEKTQLYCARALCNLACHHGSEKS-----------LVEGGGVAALMMIALVRSVSLETKQICAKALLNLVAEDTLPALIEEGIVPATTNLSKLDDEDSMRACATVFALLSADPRGRAKFVQRKSALVSLFGLLRSTDQGTQVICGKAVCNLVSC-PDSQLSAVGAGAVPCLRQLAKLGVSEIEASIAMAFLLMSGNSKCRMEVTSTALP-TVVYLSRSPNFEARCTCA-RTLGVLAWHDDSRRALTGVGVARALV------GIIEDYSEGDECQKDQLEM 1096
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G04500.1 ID=NO04G04500.1|Name=NO04G04500.1|organism=Nannochloropsis oceanica|type=mRNA|length=5652bp
ATGAAGGCGGCCACGACTACCAGCAGGATAAAAAGACAAGGGCCGGCCTC
GCCATTGCCTCCCCAAGCCCAAGCCCACCCACGCGGCCTCGTACTTAGCA
CGCCACTTTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCTTTC
TCCTCTGAAAACTCGCACTACGACGATCAGCATGACGAGGCATCAGATTT
CACCTCCCCACTGAGCTTGTCGACGGCCTTGTTGCCCCGGCAACATCATG
CGGCAGCTTTCGGGGACCAAAAGTTTTGTGGATTCACATTCAACTTTAGC
AATAATGTGCCAGGTATGCTCTATCGCTCTCGCAATGATCCGTGCAGCAT
GACTTGTCCCTTGAAGAATATTCCCCACCACACGCCGGACTGCAGTCAGC
AAGACAAGAGCGAGCACCCTCGCGACCAGGGCACCACTGCGGCTGGCAAC
ATAACCCGGGAAGCAAGCGGCAGCAATGACGCTCTATTCGATGGTGACGA
TGCAGGCTTCGCTTTCGGCGACGTGGTGGGGACGGTGGCGCTTGAGAAGC
TTGATTTGCGGCAGCGGATGGCCTTGACATTGCGAAATTGGTGCATGGAC
GAAGACAATATGGCCCTCATTGCTCGCGAAGGCGCCATCCAAGCGCTGGC
TGCACTTGCCTCCCGTGATGATAGCCTGACGCGCCGATTTTGTGCGGCTG
CCTTCTATTCCCTCTCCCATAATCCTAATTTCCGGGCGGAGTTGGTTCAA
GTGGGTGCATGCGCTATCATTGCCCAGGTGGCTCTCAATACAAAGAGCCC
TCGGGTGGCCTTGTCATGTGCGGCCTCCCTCTGCAACCTGTCGCTGGAGT
CCGGTACGGAGCCGCGCTTGGCAGAGGAAGGGGCTGTTGGTGCGCTATGC
ACATTGCTTCTGACGTTTTCTGAACGCGACATATGGATCACAAGCTTGCA
AGGGCTTTACAATTTGACCTGTGTCACGGAGAGCTACCAGGGTCTGGATC
GCGTCCTAAAGGGTTTATTTTCCGCATATGACACGCCCTGCCAGGAGATG
GATCCCTCTCAGGTTGTGGGCCGCGCCATCGCCAACCTAAGTGTCATTTA
CCGCATGCGGCTTCGGATTCTGGAGGAAGGACTTGTGGACGTCGTGAAGC
GCCACATTTTCCCCTTTGCAGACGGAGTCTTGCAGTATAATGTGGCTGTA
GCGTTCCATAACGTTGCGTGTGCCCAGACATGTAGCAGTGAAATGATCAA
CCGCGGTGTGATGGCGTGCATTGTTTCTCTAACACGACCACCTTCTAAGA
GTAACAGCTGTACCAGCATGTTTATCAGTGGCACTGTGAACAAGGACGAC
GAGGAGCAGAGAATACTGTCACAACAGCCCCAGCAGCACAATCTTCCTCT
GCTAACTTGCCTTGCAACTACTCTGCAGTACCTGAGTCTAGAAGTGGAGG
CCAGACGTACAACAATTCGAGACGGCGCCGTCCGAGCCATCCTCAACATC
CTGGAGCAAACGTCCGACCATACTGTTTTAGAGGGGTGCGCTGAGGCATT
GCATGCTTTCACGTCCTTTCAAGACAGTACACTTTTGCTGATCAAGCACC
AGACGGTTCCCGCTCTAATCAAGCTGAGCGATACTTTGTTGGCCTCGAGA
GATCCAAAACGCCGGCGGCAAAGGCACAGCGTCGTAGCCAGCTTTTGCAA
TCTGTTGAGCGCTGAAAACCACCACAGTTCTGTTCTCGACTACAAAAATT
GTCTTACATGTGTATTACGCCTAGCAGAATGTCTTGAAAGCGGCGACGAG
GACAATGGTTGCAGCGACGATGAAATCCTGTTGGAGTACCTGTCCTGCTT
GTATAGCAATTTGGCATGTGGCACTCCGCGGCGTTTCCATGCTGTCATGG
CGGGATTAGTGCCACGCCTTGTGCAATTGTGTGATTTAGAAGCCCCATCA
GCCGTCAGCATCAATCTCAAAGCTCGGTGTGCCACGGCCTTGGCCAACCT
TATGGCCATCGCCACAACTGATGGCAATATCAGCAGTGGCAGCCTCAATA
AGAGCAACAGCAGTAGCGGTGAAATCAGCACAACCAACGTCGTGAGTGCC
AACAAGCAGGGGGATAACAACAATTTATTCTTGAAGCGCATGGTGCAAGA
CGGCGTTGTAGGCTGCCTTACCCGCCTGTTGGTGGCTGCGACTGATGAGG
TACTGTTGGAAAGCGTTACAACTGCGCTAGCACTCACTTCATTTCATAAC
GACGATATCAAGGCAGAGATGATCAATCAAGGAGTTGTACATGCGCTCAT
CCACGCCGTTACAGATGAAGGACTTAGAGGGGATAAGACCCAGCATGCGG
CGGCAGCCATCTTTGCGTCGCTCTCGTACTCGGCGCAGCACATTCCCCAC
CTTTTCGACGCCGGGATCTTGGATGCCATCTTCTTACTCGCCAGGAAAGA
AGAGATAGCCACACGGAAGCGCTGCGCCACGGTCCTTTGCAACCTATCCT
TTGATCCTCATGTGCGCAATCACATGGTGGAACGCAATGTGGTGCTGCTT
CTTGCCCAACTCTCTAATATGTACAGCGATGAAACGCAGATGGACTGTGC
CTGGTGTTTTCACAACTTAGCTTGCAGCAGTGGGTCTGAAGCCGAGGCAG
TAGCGCGTACGACGCTTAACCGAGACATCATGGTGAATCAAGGAGCTGTG
GGTGCATTGCTCATGATTGCGTTGGTCCGCGCCGTCACAACGAAAACTCG
AGAGGTGTGTGCGCGGGCCCTACTGAACCTGATCACGGAGGAAACAACTG
CGAAAGTCATCGACTGTGGCATCACCCAAGGGCTGGCCTCACTGTGTGGG
CTTGACTCGGAAGTGTGTTTGAAGATTTGCGCACAGGCTTTTTGGACCTT
GTCGTTGCATCCCATCGGCAGGGCCAAGATCGCGTCGAAGAGGAATAGTA
TGCAAGGGCTCTGCAGCCTGATCCGGTCTAACGTCATTACCACTCGTACT
TTATGTGGTGCGGCGGTCCTAAATCTTTTGCTACTGGAGGCAGACACCGC
CGTGCTTGCAACCGAGGCCGGGGCTCTGGGCGTCGTCAAGGTCATGTGCA
CGTCGGGTGATGCCGCCGTCCAAATCGTATGCGCCCATGCCGTCGCCAAG
ATTGCTCTGCTTGCTGCCTGCCGCGCGCATATGCCCAAGGAATCCATCCC
GCAGGCGATGGTCCTCTTGGCGCAGCAAAATCAGGACGAGGCAACAGCAG
TGGCAGCGCTGCGTGCGCTGACCTGCCTCGCTCTGTCTCATTTCCCCTTG
ACGGTGCTGCTCCAAGCCGGTATTCTCCATGTCGTAATGTTTCGAGTCTT
GTCGAGCGGTTTTTTGGGTACTGATGTCGACAGTGATGAATGTAGTAATA
GTCATTGCGAGTTGAAGGACGGAGACAGAAGAAGAAGTCACAGTGGAACT
AGTGGCAGGGATGTCATCGAGTGTTGTATCTATATTCTGCATCGATTTGC
TCTAAGCAAGGAGCTCCGACAGGCCATGACCAAAACGCAGGTTGTATGTG
CGATCGTTGTCCTATTGCGACGGTTGGGCACGGGGAAGGTAGAGAAGCCG
CACCAAGCACCTAAAACCTTGCTGCTCGAGACCATGCTGGCAACGACACT
GGAGCGGCTTTCATGGATTCCAGCGTCACAACACCATATAGTCGAAGACG
GGGGGATGTTAGCTTTGGTACAGCTAGTCAAGCAACAACAAGATGCACCG
CCGCCTTACGGGGCGCGATTAGCCAAAAGCATTGCCATAGTTTTTGCCAA
CTTGGCCCGGACAGAGGGTCGTCGCTTGCATCTCGTGTCCGTGGGTGTCA
TAGAGGCATTGACCATCGTTCTAAAAAAAGGATTCCTTCTGGGGGATGGG
ATAACAGACAAGAAAGATGTGGTCGTATGGCGTACGGTGCTGGGTTTGCT
ACAGCTGAGCGAGTCATCGGATGATTTGCTGGTGGCGATGGCCCTTAACG
GCGCACTCGAGCTTCTTGTCTTCATCATCTTGTCGGCATCGGGCAAAGTT
GGAGAGCGGAGAGAAGTCCTGCAACGGTATGCATCGGGAGCACTATGCAA
TTTTTCACATTGCCAAGAGTGTCGCCCCCTACTGGCAGCACAAGACGGCG
CGGTGGAGGCCATCATGACTTTGTCCAAGTCGCCCAACGCAGCTATCCAA
CGTCATTGCAGCATCATGATCTCCAATCTTTCGGCCCAGCAGCACGCCAA
ACTTCGAGTAGGCGCTGTAGGAACGCTGGTGAACCTCTTCAAGTCCCAGG
ACCGACATGAAAAGACAAACCCCTCCCTAGAAGGAGGCAGGGGGAACAAA
AAGGGCGCCATCCAAGCAAAATTTCGCCGTCTGCTCATGGCCGCAACATT
GGCGAAGGAGTTGAAGGACGGTACCAAGGAGACCGCAGCTGGAGCGACAG
GTTCGGCGGCAGAGCACAACATCAACCGCGCCTCCGGGGTTGGGACTGAA
GGAGAGGATGCGGAGAAGAAGACACAGGATGGACGAGACGACTGCGAGAT
ATCCGACGGAGAAAAAGACGTTGTCGAAGATGAAGGTACTGAAGATGAGG
AAAAGAATTGGCATGCCTACCACAGTCGTGCTACCCATTTCAGTGGCGGC
CTTCCCACCACACGCTTGATGGATACGGTCGGTCTGGTTAAACAGCAGCA
ACACGCAAGACTGGCCTCTTGGGACATGATCCCACCGGCCCATGAGACTG
TCTTCTACATGTGCACTCATTCCGGAGCGTTCAGCGGTGGAGTATCACCT
ATCTTGTCGGCAAGCACTAGTGTATCCACGCCCTTAATGCACATGGATTC
CTCGTCAATGTCTGGCCAGCAGGGAGATAGCCCTTCTTCTCCCACGTCTT
CGTCTTCTTCTACATTGCCGTCAATCTTGTCTCAGACCACTTCCTCTTAT
CGAGTCCGAAATGTCATTGCCGTTAGCCACCCGAAACTGAGAGAATGTCC
CGTTCTACGGCCGAGACAAGCAGAAAAGTTGAAAGGCGCCTCGACGACTA
CAGTGGTCTATTTTATGGAACGACGCAAGAGCAGCTACTTGTCAGCGGCC
AGCAATGGGACCCTCACATCGGAGGCGACGTCGGCAGCTGCCAAGGACGA
TCCAATTTACGAGCCAACCTTCGAGGAGAAACTGGCCTCACGCATGGAGG
ACGCGGCAGTGACGAAGGCTGTCAAATGGTTGAGTGATTCCTCGTCGAGG
TCCACCTCAAGACCATCATATCCTCTTACTCCAAAGCACATGACCATCAA
GTCTGACACTTGTTTGGCCCCTCTAACGCATCCTATGTCTCCGTCATCCT
CCACAAAAGCCAATATAGTGAGCTTGAGTCCGGCAAAAGGTCTCCGAGAG
CAATCTCTCGTGACTCAAGCGCAAGACTCACCGTCAGCCCCGGCGCCATC
ACCGTTGCTCCCGTCGCCGGTGGCCATGGAGCCACAAAAGCCAGAGGAAA
ATATAACAGCGGCACCGATCTCTTCTTCTCCACGTACGTCTTTGTCAGCG
TGCCGTGTCACCAAAAAGGGCGACCTGACCTTGCTAGAAGAAGCTTTCTC
ATATTGCGGCGGAGGACAGGAGAAGATTGTAGATGGAAAGATGAAGCACT
AG back to topprotein sequence of NO04G04500.1 >NO04G04500.1-protein ID=NO04G04500.1-protein|Name=NO04G04500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1884bp
MKAATTTSRIKRQGPASPLPPQAQAHPRGLVLSTPLSSSSSSSSSSSSSF
SSENSHYDDQHDEASDFTSPLSLSTALLPRQHHAAAFGDQKFCGFTFNFS
NNVPGMLYRSRNDPCSMTCPLKNIPHHTPDCSQQDKSEHPRDQGTTAAGN
ITREASGSNDALFDGDDAGFAFGDVVGTVALEKLDLRQRMALTLRNWCMD
EDNMALIAREGAIQALAALASRDDSLTRRFCAAAFYSLSHNPNFRAELVQ
VGACAIIAQVALNTKSPRVALSCAASLCNLSLESGTEPRLAEEGAVGALC
TLLLTFSERDIWITSLQGLYNLTCVTESYQGLDRVLKGLFSAYDTPCQEM
DPSQVVGRAIANLSVIYRMRLRILEEGLVDVVKRHIFPFADGVLQYNVAV
AFHNVACAQTCSSEMINRGVMACIVSLTRPPSKSNSCTSMFISGTVNKDD
EEQRILSQQPQQHNLPLLTCLATTLQYLSLEVEARRTTIRDGAVRAILNI
LEQTSDHTVLEGCAEALHAFTSFQDSTLLLIKHQTVPALIKLSDTLLASR
DPKRRRQRHSVVASFCNLLSAENHHSSVLDYKNCLTCVLRLAECLESGDE
DNGCSDDEILLEYLSCLYSNLACGTPRRFHAVMAGLVPRLVQLCDLEAPS
AVSINLKARCATALANLMAIATTDGNISSGSLNKSNSSSGEISTTNVVSA
NKQGDNNNLFLKRMVQDGVVGCLTRLLVAATDEVLLESVTTALALTSFHN
DDIKAEMINQGVVHALIHAVTDEGLRGDKTQHAAAAIFASLSYSAQHIPH
LFDAGILDAIFLLARKEEIATRKRCATVLCNLSFDPHVRNHMVERNVVLL
LAQLSNMYSDETQMDCAWCFHNLACSSGSEAEAVARTTLNRDIMVNQGAV
GALLMIALVRAVTTKTREVCARALLNLITEETTAKVIDCGITQGLASLCG
LDSEVCLKICAQAFWTLSLHPIGRAKIASKRNSMQGLCSLIRSNVITTRT
LCGAAVLNLLLLEADTAVLATEAGALGVVKVMCTSGDAAVQIVCAHAVAK
IALLAACRAHMPKESIPQAMVLLAQQNQDEATAVAALRALTCLALSHFPL
TVLLQAGILHVVMFRVLSSGFLGTDVDSDECSNSHCELKDGDRRRSHSGT
SGRDVIECCIYILHRFALSKELRQAMTKTQVVCAIVVLLRRLGTGKVEKP
HQAPKTLLLETMLATTLERLSWIPASQHHIVEDGGMLALVQLVKQQQDAP
PPYGARLAKSIAIVFANLARTEGRRLHLVSVGVIEALTIVLKKGFLLGDG
ITDKKDVVVWRTVLGLLQLSESSDDLLVAMALNGALELLVFIILSASGKV
GERREVLQRYASGALCNFSHCQECRPLLAAQDGAVEAIMTLSKSPNAAIQ
RHCSIMISNLSAQQHAKLRVGAVGTLVNLFKSQDRHEKTNPSLEGGRGNK
KGAIQAKFRRLLMAATLAKELKDGTKETAAGATGSAAEHNINRASGVGTE
GEDAEKKTQDGRDDCEISDGEKDVVEDEGTEDEEKNWHAYHSRATHFSGG
LPTTRLMDTVGLVKQQQHARLASWDMIPPAHETVFYMCTHSGAFSGGVSP
ILSASTSVSTPLMHMDSSSMSGQQGDSPSSPTSSSSSTLPSILSQTTSSY
RVRNVIAVSHPKLRECPVLRPRQAEKLKGASTTTVVYFMERRKSSYLSAA
SNGTLTSEATSAAAKDDPIYEPTFEEKLASRMEDAAVTKAVKWLSDSSSR
STSRPSYPLTPKHMTIKSDTCLAPLTHPMSPSSSTKANIVSLSPAKGLRE
QSLVTQAQDSPSAPAPSPLLPSPVAMEPQKPEENITAAPISSSPRTSLSA
CRVTKKGDLTLLEEAFSYCGGGQEKIVDGKMKH* back to topmRNA from alignment at chr4:1221165..1226816+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G04500.1 ID=NO04G04500.1|Name=NO04G04500.1|organism=Nannochloropsis oceanica|type=mRNA|length=5652bp|location=Sequence derived from alignment at chr4:1221165..1226816+ (Nannochloropsis oceanica)
ATGAAGGCGGCCACGACTACCAGCAGGATAAAAAGACAAGGGCCGGCCTC
GCCATTGCCTCCCCAAGCCCAAGCCCACCCACGCGGCCTCGTACTTAGCA
CGCCACTTTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCTTTC
TCCTCTGAAAACTCGCACTACGACGATCAGCATGACGAGGCATCAGATTT
CACCTCCCCACTGAGCTTGTCGACGGCCTTGTTGCCCCGGCAACATCATG
CGGCAGCTTTCGGGGACCAAAAGTTTTGTGGATTCACATTCAACTTTAGC
AATAATGTGCCAGGTATGCTCTATCGCTCTCGCAATGATCCGTGCAGCAT
GACTTGTCCCTTGAAGAATATTCCCCACCACACGCCGGACTGCAGTCAGC
AAGACAAGAGCGAGCACCCTCGCGACCAGGGCACCACTGCGGCTGGCAAC
ATAACCCGGGAAGCAAGCGGCAGCAATGACGCTCTATTCGATGGTGACGA
TGCAGGCTTCGCTTTCGGCGACGTGGTGGGGACGGTGGCGCTTGAGAAGC
TTGATTTGCGGCAGCGGATGGCCTTGACATTGCGAAATTGGTGCATGGAC
GAAGACAATATGGCCCTCATTGCTCGCGAAGGCGCCATCCAAGCGCTGGC
TGCACTTGCCTCCCGTGATGATAGCCTGACGCGCCGATTTTGTGCGGCTG
CCTTCTATTCCCTCTCCCATAATCCTAATTTCCGGGCGGAGTTGGTTCAA
GTGGGTGCATGCGCTATCATTGCCCAGGTGGCTCTCAATACAAAGAGCCC
TCGGGTGGCCTTGTCATGTGCGGCCTCCCTCTGCAACCTGTCGCTGGAGT
CCGGTACGGAGCCGCGCTTGGCAGAGGAAGGGGCTGTTGGTGCGCTATGC
ACATTGCTTCTGACGTTTTCTGAACGCGACATATGGATCACAAGCTTGCA
AGGGCTTTACAATTTGACCTGTGTCACGGAGAGCTACCAGGGTCTGGATC
GCGTCCTAAAGGGTTTATTTTCCGCATATGACACGCCCTGCCAGGAGATG
GATCCCTCTCAGGTTGTGGGCCGCGCCATCGCCAACCTAAGTGTCATTTA
CCGCATGCGGCTTCGGATTCTGGAGGAAGGACTTGTGGACGTCGTGAAGC
GCCACATTTTCCCCTTTGCAGACGGAGTCTTGCAGTATAATGTGGCTGTA
GCGTTCCATAACGTTGCGTGTGCCCAGACATGTAGCAGTGAAATGATCAA
CCGCGGTGTGATGGCGTGCATTGTTTCTCTAACACGACCACCTTCTAAGA
GTAACAGCTGTACCAGCATGTTTATCAGTGGCACTGTGAACAAGGACGAC
GAGGAGCAGAGAATACTGTCACAACAGCCCCAGCAGCACAATCTTCCTCT
GCTAACTTGCCTTGCAACTACTCTGCAGTACCTGAGTCTAGAAGTGGAGG
CCAGACGTACAACAATTCGAGACGGCGCCGTCCGAGCCATCCTCAACATC
CTGGAGCAAACGTCCGACCATACTGTTTTAGAGGGGTGCGCTGAGGCATT
GCATGCTTTCACGTCCTTTCAAGACAGTACACTTTTGCTGATCAAGCACC
AGACGGTTCCCGCTCTAATCAAGCTGAGCGATACTTTGTTGGCCTCGAGA
GATCCAAAACGCCGGCGGCAAAGGCACAGCGTCGTAGCCAGCTTTTGCAA
TCTGTTGAGCGCTGAAAACCACCACAGTTCTGTTCTCGACTACAAAAATT
GTCTTACATGTGTATTACGCCTAGCAGAATGTCTTGAAAGCGGCGACGAG
GACAATGGTTGCAGCGACGATGAAATCCTGTTGGAGTACCTGTCCTGCTT
GTATAGCAATTTGGCATGTGGCACTCCGCGGCGTTTCCATGCTGTCATGG
CGGGATTAGTGCCACGCCTTGTGCAATTGTGTGATTTAGAAGCCCCATCA
GCCGTCAGCATCAATCTCAAAGCTCGGTGTGCCACGGCCTTGGCCAACCT
TATGGCCATCGCCACAACTGATGGCAATATCAGCAGTGGCAGCCTCAATA
AGAGCAACAGCAGTAGCGGTGAAATCAGCACAACCAACGTCGTGAGTGCC
AACAAGCAGGGGGATAACAACAATTTATTCTTGAAGCGCATGGTGCAAGA
CGGCGTTGTAGGCTGCCTTACCCGCCTGTTGGTGGCTGCGACTGATGAGG
TACTGTTGGAAAGCGTTACAACTGCGCTAGCACTCACTTCATTTCATAAC
GACGATATCAAGGCAGAGATGATCAATCAAGGAGTTGTACATGCGCTCAT
CCACGCCGTTACAGATGAAGGACTTAGAGGGGATAAGACCCAGCATGCGG
CGGCAGCCATCTTTGCGTCGCTCTCGTACTCGGCGCAGCACATTCCCCAC
CTTTTCGACGCCGGGATCTTGGATGCCATCTTCTTACTCGCCAGGAAAGA
AGAGATAGCCACACGGAAGCGCTGCGCCACGGTCCTTTGCAACCTATCCT
TTGATCCTCATGTGCGCAATCACATGGTGGAACGCAATGTGGTGCTGCTT
CTTGCCCAACTCTCTAATATGTACAGCGATGAAACGCAGATGGACTGTGC
CTGGTGTTTTCACAACTTAGCTTGCAGCAGTGGGTCTGAAGCCGAGGCAG
TAGCGCGTACGACGCTTAACCGAGACATCATGGTGAATCAAGGAGCTGTG
GGTGCATTGCTCATGATTGCGTTGGTCCGCGCCGTCACAACGAAAACTCG
AGAGGTGTGTGCGCGGGCCCTACTGAACCTGATCACGGAGGAAACAACTG
CGAAAGTCATCGACTGTGGCATCACCCAAGGGCTGGCCTCACTGTGTGGG
CTTGACTCGGAAGTGTGTTTGAAGATTTGCGCACAGGCTTTTTGGACCTT
GTCGTTGCATCCCATCGGCAGGGCCAAGATCGCGTCGAAGAGGAATAGTA
TGCAAGGGCTCTGCAGCCTGATCCGGTCTAACGTCATTACCACTCGTACT
TTATGTGGTGCGGCGGTCCTAAATCTTTTGCTACTGGAGGCAGACACCGC
CGTGCTTGCAACCGAGGCCGGGGCTCTGGGCGTCGTCAAGGTCATGTGCA
CGTCGGGTGATGCCGCCGTCCAAATCGTATGCGCCCATGCCGTCGCCAAG
ATTGCTCTGCTTGCTGCCTGCCGCGCGCATATGCCCAAGGAATCCATCCC
GCAGGCGATGGTCCTCTTGGCGCAGCAAAATCAGGACGAGGCAACAGCAG
TGGCAGCGCTGCGTGCGCTGACCTGCCTCGCTCTGTCTCATTTCCCCTTG
ACGGTGCTGCTCCAAGCCGGTATTCTCCATGTCGTAATGTTTCGAGTCTT
GTCGAGCGGTTTTTTGGGTACTGATGTCGACAGTGATGAATGTAGTAATA
GTCATTGCGAGTTGAAGGACGGAGACAGAAGAAGAAGTCACAGTGGAACT
AGTGGCAGGGATGTCATCGAGTGTTGTATCTATATTCTGCATCGATTTGC
TCTAAGCAAGGAGCTCCGACAGGCCATGACCAAAACGCAGGTTGTATGTG
CGATCGTTGTCCTATTGCGACGGTTGGGCACGGGGAAGGTAGAGAAGCCG
CACCAAGCACCTAAAACCTTGCTGCTCGAGACCATGCTGGCAACGACACT
GGAGCGGCTTTCATGGATTCCAGCGTCACAACACCATATAGTCGAAGACG
GGGGGATGTTAGCTTTGGTACAGCTAGTCAAGCAACAACAAGATGCACCG
CCGCCTTACGGGGCGCGATTAGCCAAAAGCATTGCCATAGTTTTTGCCAA
CTTGGCCCGGACAGAGGGTCGTCGCTTGCATCTCGTGTCCGTGGGTGTCA
TAGAGGCATTGACCATCGTTCTAAAAAAAGGATTCCTTCTGGGGGATGGG
ATAACAGACAAGAAAGATGTGGTCGTATGGCGTACGGTGCTGGGTTTGCT
ACAGCTGAGCGAGTCATCGGATGATTTGCTGGTGGCGATGGCCCTTAACG
GCGCACTCGAGCTTCTTGTCTTCATCATCTTGTCGGCATCGGGCAAAGTT
GGAGAGCGGAGAGAAGTCCTGCAACGGTATGCATCGGGAGCACTATGCAA
TTTTTCACATTGCCAAGAGTGTCGCCCCCTACTGGCAGCACAAGACGGCG
CGGTGGAGGCCATCATGACTTTGTCCAAGTCGCCCAACGCAGCTATCCAA
CGTCATTGCAGCATCATGATCTCCAATCTTTCGGCCCAGCAGCACGCCAA
ACTTCGAGTAGGCGCTGTAGGAACGCTGGTGAACCTCTTCAAGTCCCAGG
ACCGACATGAAAAGACAAACCCCTCCCTAGAAGGAGGCAGGGGGAACAAA
AAGGGCGCCATCCAAGCAAAATTTCGCCGTCTGCTCATGGCCGCAACATT
GGCGAAGGAGTTGAAGGACGGTACCAAGGAGACCGCAGCTGGAGCGACAG
GTTCGGCGGCAGAGCACAACATCAACCGCGCCTCCGGGGTTGGGACTGAA
GGAGAGGATGCGGAGAAGAAGACACAGGATGGACGAGACGACTGCGAGAT
ATCCGACGGAGAAAAAGACGTTGTCGAAGATGAAGGTACTGAAGATGAGG
AAAAGAATTGGCATGCCTACCACAGTCGTGCTACCCATTTCAGTGGCGGC
CTTCCCACCACACGCTTGATGGATACGGTCGGTCTGGTTAAACAGCAGCA
ACACGCAAGACTGGCCTCTTGGGACATGATCCCACCGGCCCATGAGACTG
TCTTCTACATGTGCACTCATTCCGGAGCGTTCAGCGGTGGAGTATCACCT
ATCTTGTCGGCAAGCACTAGTGTATCCACGCCCTTAATGCACATGGATTC
CTCGTCAATGTCTGGCCAGCAGGGAGATAGCCCTTCTTCTCCCACGTCTT
CGTCTTCTTCTACATTGCCGTCAATCTTGTCTCAGACCACTTCCTCTTAT
CGAGTCCGAAATGTCATTGCCGTTAGCCACCCGAAACTGAGAGAATGTCC
CGTTCTACGGCCGAGACAAGCAGAAAAGTTGAAAGGCGCCTCGACGACTA
CAGTGGTCTATTTTATGGAACGACGCAAGAGCAGCTACTTGTCAGCGGCC
AGCAATGGGACCCTCACATCGGAGGCGACGTCGGCAGCTGCCAAGGACGA
TCCAATTTACGAGCCAACCTTCGAGGAGAAACTGGCCTCACGCATGGAGG
ACGCGGCAGTGACGAAGGCTGTCAAATGGTTGAGTGATTCCTCGTCGAGG
TCCACCTCAAGACCATCATATCCTCTTACTCCAAAGCACATGACCATCAA
GTCTGACACTTGTTTGGCCCCTCTAACGCATCCTATGTCTCCGTCATCCT
CCACAAAAGCCAATATAGTGAGCTTGAGTCCGGCAAAAGGTCTCCGAGAG
CAATCTCTCGTGACTCAAGCGCAAGACTCACCGTCAGCCCCGGCGCCATC
ACCGTTGCTCCCGTCGCCGGTGGCCATGGAGCCACAAAAGCCAGAGGAAA
ATATAACAGCGGCACCGATCTCTTCTTCTCCACGTACGTCTTTGTCAGCG
TGCCGTGTCACCAAAAAGGGCGACCTGACCTTGCTAGAAGAAGCTTTCTC
ATATTGCGGCGGAGGACAGGAGAAGATTGTAGATGGAAAGATGAAGCACT
AG back to topCoding sequence (CDS) from alignment at chr4:1221165..1226816+ >NO04G04500.1 ID=NO04G04500.1|Name=NO04G04500.1|organism=Nannochloropsis oceanica|type=CDS|length=5652bp|location=Sequence derived from alignment at chr4:1221165..1226816+ (Nannochloropsis oceanica)
ATGAAGGCGGCCACGACTACCAGCAGGATAAAAAGACAAGGGCCGGCCTC
GCCATTGCCTCCCCAAGCCCAAGCCCACCCACGCGGCCTCGTACTTAGCA
CGCCACTTTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCTTTC
TCCTCTGAAAACTCGCACTACGACGATCAGCATGACGAGGCATCAGATTT
CACCTCCCCACTGAGCTTGTCGACGGCCTTGTTGCCCCGGCAACATCATG
CGGCAGCTTTCGGGGACCAAAAGTTTTGTGGATTCACATTCAACTTTAGC
AATAATGTGCCAGGTATGCTCTATCGCTCTCGCAATGATCCGTGCAGCAT
GACTTGTCCCTTGAAGAATATTCCCCACCACACGCCGGACTGCAGTCAGC
AAGACAAGAGCGAGCACCCTCGCGACCAGGGCACCACTGCGGCTGGCAAC
ATAACCCGGGAAGCAAGCGGCAGCAATGACGCTCTATTCGATGGTGACGA
TGCAGGCTTCGCTTTCGGCGACGTGGTGGGGACGGTGGCGCTTGAGAAGC
TTGATTTGCGGCAGCGGATGGCCTTGACATTGCGAAATTGGTGCATGGAC
GAAGACAATATGGCCCTCATTGCTCGCGAAGGCGCCATCCAAGCGCTGGC
TGCACTTGCCTCCCGTGATGATAGCCTGACGCGCCGATTTTGTGCGGCTG
CCTTCTATTCCCTCTCCCATAATCCTAATTTCCGGGCGGAGTTGGTTCAA
GTGGGTGCATGCGCTATCATTGCCCAGGTGGCTCTCAATACAAAGAGCCC
TCGGGTGGCCTTGTCATGTGCGGCCTCCCTCTGCAACCTGTCGCTGGAGT
CCGGTACGGAGCCGCGCTTGGCAGAGGAAGGGGCTGTTGGTGCGCTATGC
ACATTGCTTCTGACGTTTTCTGAACGCGACATATGGATCACAAGCTTGCA
AGGGCTTTACAATTTGACCTGTGTCACGGAGAGCTACCAGGGTCTGGATC
GCGTCCTAAAGGGTTTATTTTCCGCATATGACACGCCCTGCCAGGAGATG
GATCCCTCTCAGGTTGTGGGCCGCGCCATCGCCAACCTAAGTGTCATTTA
CCGCATGCGGCTTCGGATTCTGGAGGAAGGACTTGTGGACGTCGTGAAGC
GCCACATTTTCCCCTTTGCAGACGGAGTCTTGCAGTATAATGTGGCTGTA
GCGTTCCATAACGTTGCGTGTGCCCAGACATGTAGCAGTGAAATGATCAA
CCGCGGTGTGATGGCGTGCATTGTTTCTCTAACACGACCACCTTCTAAGA
GTAACAGCTGTACCAGCATGTTTATCAGTGGCACTGTGAACAAGGACGAC
GAGGAGCAGAGAATACTGTCACAACAGCCCCAGCAGCACAATCTTCCTCT
GCTAACTTGCCTTGCAACTACTCTGCAGTACCTGAGTCTAGAAGTGGAGG
CCAGACGTACAACAATTCGAGACGGCGCCGTCCGAGCCATCCTCAACATC
CTGGAGCAAACGTCCGACCATACTGTTTTAGAGGGGTGCGCTGAGGCATT
GCATGCTTTCACGTCCTTTCAAGACAGTACACTTTTGCTGATCAAGCACC
AGACGGTTCCCGCTCTAATCAAGCTGAGCGATACTTTGTTGGCCTCGAGA
GATCCAAAACGCCGGCGGCAAAGGCACAGCGTCGTAGCCAGCTTTTGCAA
TCTGTTGAGCGCTGAAAACCACCACAGTTCTGTTCTCGACTACAAAAATT
GTCTTACATGTGTATTACGCCTAGCAGAATGTCTTGAAAGCGGCGACGAG
GACAATGGTTGCAGCGACGATGAAATCCTGTTGGAGTACCTGTCCTGCTT
GTATAGCAATTTGGCATGTGGCACTCCGCGGCGTTTCCATGCTGTCATGG
CGGGATTAGTGCCACGCCTTGTGCAATTGTGTGATTTAGAAGCCCCATCA
GCCGTCAGCATCAATCTCAAAGCTCGGTGTGCCACGGCCTTGGCCAACCT
TATGGCCATCGCCACAACTGATGGCAATATCAGCAGTGGCAGCCTCAATA
AGAGCAACAGCAGTAGCGGTGAAATCAGCACAACCAACGTCGTGAGTGCC
AACAAGCAGGGGGATAACAACAATTTATTCTTGAAGCGCATGGTGCAAGA
CGGCGTTGTAGGCTGCCTTACCCGCCTGTTGGTGGCTGCGACTGATGAGG
TACTGTTGGAAAGCGTTACAACTGCGCTAGCACTCACTTCATTTCATAAC
GACGATATCAAGGCAGAGATGATCAATCAAGGAGTTGTACATGCGCTCAT
CCACGCCGTTACAGATGAAGGACTTAGAGGGGATAAGACCCAGCATGCGG
CGGCAGCCATCTTTGCGTCGCTCTCGTACTCGGCGCAGCACATTCCCCAC
CTTTTCGACGCCGGGATCTTGGATGCCATCTTCTTACTCGCCAGGAAAGA
AGAGATAGCCACACGGAAGCGCTGCGCCACGGTCCTTTGCAACCTATCCT
TTGATCCTCATGTGCGCAATCACATGGTGGAACGCAATGTGGTGCTGCTT
CTTGCCCAACTCTCTAATATGTACAGCGATGAAACGCAGATGGACTGTGC
CTGGTGTTTTCACAACTTAGCTTGCAGCAGTGGGTCTGAAGCCGAGGCAG
TAGCGCGTACGACGCTTAACCGAGACATCATGGTGAATCAAGGAGCTGTG
GGTGCATTGCTCATGATTGCGTTGGTCCGCGCCGTCACAACGAAAACTCG
AGAGGTGTGTGCGCGGGCCCTACTGAACCTGATCACGGAGGAAACAACTG
CGAAAGTCATCGACTGTGGCATCACCCAAGGGCTGGCCTCACTGTGTGGG
CTTGACTCGGAAGTGTGTTTGAAGATTTGCGCACAGGCTTTTTGGACCTT
GTCGTTGCATCCCATCGGCAGGGCCAAGATCGCGTCGAAGAGGAATAGTA
TGCAAGGGCTCTGCAGCCTGATCCGGTCTAACGTCATTACCACTCGTACT
TTATGTGGTGCGGCGGTCCTAAATCTTTTGCTACTGGAGGCAGACACCGC
CGTGCTTGCAACCGAGGCCGGGGCTCTGGGCGTCGTCAAGGTCATGTGCA
CGTCGGGTGATGCCGCCGTCCAAATCGTATGCGCCCATGCCGTCGCCAAG
ATTGCTCTGCTTGCTGCCTGCCGCGCGCATATGCCCAAGGAATCCATCCC
GCAGGCGATGGTCCTCTTGGCGCAGCAAAATCAGGACGAGGCAACAGCAG
TGGCAGCGCTGCGTGCGCTGACCTGCCTCGCTCTGTCTCATTTCCCCTTG
ACGGTGCTGCTCCAAGCCGGTATTCTCCATGTCGTAATGTTTCGAGTCTT
GTCGAGCGGTTTTTTGGGTACTGATGTCGACAGTGATGAATGTAGTAATA
GTCATTGCGAGTTGAAGGACGGAGACAGAAGAAGAAGTCACAGTGGAACT
AGTGGCAGGGATGTCATCGAGTGTTGTATCTATATTCTGCATCGATTTGC
TCTAAGCAAGGAGCTCCGACAGGCCATGACCAAAACGCAGGTTGTATGTG
CGATCGTTGTCCTATTGCGACGGTTGGGCACGGGGAAGGTAGAGAAGCCG
CACCAAGCACCTAAAACCTTGCTGCTCGAGACCATGCTGGCAACGACACT
GGAGCGGCTTTCATGGATTCCAGCGTCACAACACCATATAGTCGAAGACG
GGGGGATGTTAGCTTTGGTACAGCTAGTCAAGCAACAACAAGATGCACCG
CCGCCTTACGGGGCGCGATTAGCCAAAAGCATTGCCATAGTTTTTGCCAA
CTTGGCCCGGACAGAGGGTCGTCGCTTGCATCTCGTGTCCGTGGGTGTCA
TAGAGGCATTGACCATCGTTCTAAAAAAAGGATTCCTTCTGGGGGATGGG
ATAACAGACAAGAAAGATGTGGTCGTATGGCGTACGGTGCTGGGTTTGCT
ACAGCTGAGCGAGTCATCGGATGATTTGCTGGTGGCGATGGCCCTTAACG
GCGCACTCGAGCTTCTTGTCTTCATCATCTTGTCGGCATCGGGCAAAGTT
GGAGAGCGGAGAGAAGTCCTGCAACGGTATGCATCGGGAGCACTATGCAA
TTTTTCACATTGCCAAGAGTGTCGCCCCCTACTGGCAGCACAAGACGGCG
CGGTGGAGGCCATCATGACTTTGTCCAAGTCGCCCAACGCAGCTATCCAA
CGTCATTGCAGCATCATGATCTCCAATCTTTCGGCCCAGCAGCACGCCAA
ACTTCGAGTAGGCGCTGTAGGAACGCTGGTGAACCTCTTCAAGTCCCAGG
ACCGACATGAAAAGACAAACCCCTCCCTAGAAGGAGGCAGGGGGAACAAA
AAGGGCGCCATCCAAGCAAAATTTCGCCGTCTGCTCATGGCCGCAACATT
GGCGAAGGAGTTGAAGGACGGTACCAAGGAGACCGCAGCTGGAGCGACAG
GTTCGGCGGCAGAGCACAACATCAACCGCGCCTCCGGGGTTGGGACTGAA
GGAGAGGATGCGGAGAAGAAGACACAGGATGGACGAGACGACTGCGAGAT
ATCCGACGGAGAAAAAGACGTTGTCGAAGATGAAGGTACTGAAGATGAGG
AAAAGAATTGGCATGCCTACCACAGTCGTGCTACCCATTTCAGTGGCGGC
CTTCCCACCACACGCTTGATGGATACGGTCGGTCTGGTTAAACAGCAGCA
ACACGCAAGACTGGCCTCTTGGGACATGATCCCACCGGCCCATGAGACTG
TCTTCTACATGTGCACTCATTCCGGAGCGTTCAGCGGTGGAGTATCACCT
ATCTTGTCGGCAAGCACTAGTGTATCCACGCCCTTAATGCACATGGATTC
CTCGTCAATGTCTGGCCAGCAGGGAGATAGCCCTTCTTCTCCCACGTCTT
CGTCTTCTTCTACATTGCCGTCAATCTTGTCTCAGACCACTTCCTCTTAT
CGAGTCCGAAATGTCATTGCCGTTAGCCACCCGAAACTGAGAGAATGTCC
CGTTCTACGGCCGAGACAAGCAGAAAAGTTGAAAGGCGCCTCGACGACTA
CAGTGGTCTATTTTATGGAACGACGCAAGAGCAGCTACTTGTCAGCGGCC
AGCAATGGGACCCTCACATCGGAGGCGACGTCGGCAGCTGCCAAGGACGA
TCCAATTTACGAGCCAACCTTCGAGGAGAAACTGGCCTCACGCATGGAGG
ACGCGGCAGTGACGAAGGCTGTCAAATGGTTGAGTGATTCCTCGTCGAGG
TCCACCTCAAGACCATCATATCCTCTTACTCCAAAGCACATGACCATCAA
GTCTGACACTTGTTTGGCCCCTCTAACGCATCCTATGTCTCCGTCATCCT
CCACAAAAGCCAATATAGTGAGCTTGAGTCCGGCAAAAGGTCTCCGAGAG
CAATCTCTCGTGACTCAAGCGCAAGACTCACCGTCAGCCCCGGCGCCATC
ACCGTTGCTCCCGTCGCCGGTGGCCATGGAGCCACAAAAGCCAGAGGAAA
ATATAACAGCGGCACCGATCTCTTCTTCTCCACGTACGTCTTTGTCAGCG
TGCCGTGTCACCAAAAAGGGCGACCTGACCTTGCTAGAAGAAGCTTTCTC
ATATTGCGGCGGAGGACAGGAGAAGATTGTAGATGGAAAGATGAAGCACT
AG back to top
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