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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr4 | genome | chr4:1206049..1207610 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G04440.1 ID=NO04G04440.1|Name=NO04G04440.1|organism=Nannochloropsis oceanica|type=mRNA|length=1562bp CTTCGGAGGATCTATCGCTGCATGGGCCACCTCCTTTTTCTTCCGGAAAT GGTGTCCACACCATTGTTGCTTGTATTTTGGGTAGACAGGCATGGAATGT TGCCCTATTTGGCTTCTTATTTGTCCTTGTCTCTTCCGTCAAAGTGTCCT AGTCCCTACAGTGGTAAAATGTTTGCTTGCCATTGCCAAGCTCAACGGAC GCTCGGACATGGACTCTCTAAAATATTGACGCCCCAAAGTAAACAAAGCG TATGTATATATGTATATATGTATATGTATACAATATTGTTCATTTTTGCT GACCGCCTGAATTTAAACTCGCAATGCGATGCGTAGTTTGCTAATTGCTC GATTTAATGCAGGTTTCAGACCTTCTGAGGGCGGCTTTCATAGAAAACGT TGCGGGACATGCACCACCAGCGGGAGGGGAGGGGAGGACAAATGATCCAT TGCATGCCTAACCTACCACCACACTGCCCCTCGGTCCACCTCCTCAAACA GAATATGGCGATAGGACGGCCCTACGTTATGCTGGTGCTCGTCACCCTCT TCCTCGCCACCTTGTCCACCGTGCGTGCCGACGCTTGTCCTACGCCCGAG TACACCGTGAAGCCCTCTGGCCGAGGCAGGCGTGTGTGGGCAGATAAGGT GACCAGGATTAGATTGACCATCAAGAATACTTCCCCATTTGCGCTTGACA ATTACGTGATCCGAATGGGTGTACCTACGGACCACGTCACCTACCAATCA TATAATGTATTGGGACACACGGCGAGGAGGAAGGCAATCACCAACTTTCT CACGAAGCCTGATGGTAGCCTTGAGTGGACCCTCTTTGACATGCCTGCAG GAAAGGACTTCAGATTCCTCATTTTTGTGAAAATTCGTGATTGCGCTTCT CTTGGCGCCATCTCCTTTCCTATCTCCAGCTTTTATAATAGAGTAAATGA TACTTGCCCCTTCGACGGACCTGCTGCCAAAATGCGCATCGTCATGCCCA AAAAAACAAAGGGGAATAGGCGCCCTCCCATGCCCACAGGATGTCCTACC CCGGCTCCCACCATTGCTCCCAGTGCCGCTCCCAGCCTTGCGCCCATCTA ATCTGGTTGTGGACCCGAGGTGGTTTTTCTACTTGGTAATACGATGCTTT GGCGAAGGGGGAGGCATGCGAGTTGCTGCGAAGTAAATGGTGGCCTTTGA GAAGTGCCATTTGAGAAGTGCCATTTGAGAAGTGCATTCAAATGAAAGGA AGAAAGAGGACACAGACGCCCTGGCACTCGGGACAGCGGCTGTACGGTGG AGGAGGAGGCTGAGGACGAGGACGAGGACGGGGACGGGGACGAGGAAGAC GAGGAAAATTGAATTGCATGTTAGGAGGATATGCGAAAGGAATTGACAAC GATTAGACGAAGGATAACTACACCCGAAAAGAGGACACGGACGTCGTTGC ACTCGGAGTAGCAGCCAGATGGCAGAGGACGCGGACGAAGAGGACGAGGA CGAGAGTTGAATTGTATGAATTGCATCAAGAGAAAGATATGAAAAAGACA CAGACTACGATG back to topprotein sequence of NO04G04440.1 >NO04G04440.1-protein ID=NO04G04440.1-protein|Name=NO04G04440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=231bp MHHQREGRGGQMIHCMPNLPPHCPSVHLLKQNMAIGRPYVMLVLVTLFLA TLSTVRADACPTPEYTVKPSGRGRRVWADKVTRIRLTIKNTSPFALDNYV IRMGVPTDHVTYQSYNVLGHTARRKAITNFLTKPDGSLEWTLFDMPAGKD FRFLIFVKIRDCASLGAISFPISSFYNRVNDTCPFDGPAAKMRIVMPKKT KGNRRPPMPTGCPTPAPTIAPSAAPSLAPI* back to topmRNA from alignment at chr4:1206049..1207610+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G04440.1 ID=NO04G04440.1|Name=NO04G04440.1|organism=Nannochloropsis oceanica|type=mRNA|length=1562bp|location=Sequence derived from alignment at chr4:1206049..1207610+ (Nannochloropsis oceanica) CTTCGGAGGATCTATCGCTGCATGGGCCACCTCCTTTTTCTTCCGGAAAT
GGTGTCCACACCATTGTTGCTTGTATTTTGGGTAGACAGGCATGGAATGT
TGCCCTATTTGGCTTCTTATTTGTCCTTGTCTCTTCCGTCAAAGTGTCCT
AGTCCCTACAGTGGTAAAATGTTTGCTTGCCATTGCCAAGCTCAACGGAC
GCTCGGACATGGACTCTCTAAAATATTGACGCCCCAAAGTAAACAAAGCG
TATGTATATATGTATATATGTATATGTATACAATATTGTTCATTTTTGCT
GACCGCCTGAATTTAAACTCGCAATGCGATGCGTAGTTTGCTAATTGCTC
GATTTAATGCAGGTTTCAGACCTTCTGAGGGCGGCTTTCATAGAAAACGT
TGCGGGACATGCACCACCAGCGGGAGGGGAGGGGAGGACAAATGATCCAT
TGCATGCCTAACCTACCACCACACTGCCCCTCGGTCCACCTCCTCAAACA
GAATATGGCGATAGGACGGCCCTACGTTATGCTGGTGCTCGTCACCCTCT
TCCTCGCCACCTTGTCCACCGTGCGTGCCGACGCTTGTCCTACGCCCGAG
TACACCGTGAAGCCCTCTGGCCGAGGCAGGCGTGTGTGGGCAGATAAGGT
GACCAGGATTAGATTGACCATCAAGAATACTTCCCCATTTGCGCTTGACA
ATTACGTGATCCGAATGGGTGTACCTACGGACCACGTCACCTACCAATCA
TATAATGTATTGGGACACACGGCGAGGAGGAAGGCAATCACCAACTTTCT
CACGAAGCCTGATGGTAGCCTTGAGTGGACCCTCTTTGACATGCCTGCAG
GAAAGGACTTCAGATTCCTCATTTTTGTGAAAATTCGTGATTGCGCTTCT
CTTGGCGCCATCTCCTTTCCTATCTCCAGCTTTTATAATAGAGTAAATGA
TACTTGCCCCTTCGACGGACCTGCTGCCAAAATGCGCATCGTCATGCCCA
AAAAAACAAAGGGGAATAGGCGCCCTCCCATGCCCACAGGATGTCCTACC
CCGGCTCCCACCATTGCTCCCAGTGCCGCTCCCAGCCTTGCGCCCATCTA
ATCTGGTTGTGGACCCGAGGTGGTTTTTCTACTTGGTAATACGATGCTTT
GGCGAAGGGGGAGGCATGCGAGTTGCTGCGAAGTAAATGGTGGCCTTTGA
GAAGTGCCATTTGAGAAGTGCCATTTGAGAAGTGCATTCAAATGAAAGGA
AGAAAGAGGACACAGACGCCCTGGCACTCGGGACAGCGGCTGTACGGTGG
AGGAGGAGGCTGAGGACGAGGACGAGGACGGGGACGGGGACGAGGAAGAC
GAGGAAAATTGAATTGCATGTTAGGAGGATATGCGAAAGGAATTGACAAC
GATTAGACGAAGGATAACTACACCCGAAAAGAGGACACGGACGTCGTTGC
ACTCGGAGTAGCAGCCAGATGGCAGAGGACGCGGACGAAGAGGACGAGGA
CGAGAGTTGAATTGTATGAATTGCATCAAGAGAAAGATATGAAAAAGACA
CAGACTACGATG back to topCoding sequence (CDS) from alignment at chr4:1206049..1207610+ >NO04G04440.1 ID=NO04G04440.1|Name=NO04G04440.1|organism=Nannochloropsis oceanica|type=CDS|length=693bp|location=Sequence derived from alignment at chr4:1206049..1207610+ (Nannochloropsis oceanica) ATGCACCACCAGCGGGAGGGGAGGGGAGGACAAATGATCCATTGCATGCC TAACCTACCACCACACTGCCCCTCGGTCCACCTCCTCAAACAGAATATGG CGATAGGACGGCCCTACGTTATGCTGGTGCTCGTCACCCTCTTCCTCGCC ACCTTGTCCACCGTGCGTGCCGACGCTTGTCCTACGCCCGAGTACACCGT GAAGCCCTCTGGCCGAGGCAGGCGTGTGTGGGCAGATAAGGTGACCAGGA TTAGATTGACCATCAAGAATACTTCCCCATTTGCGCTTGACAATTACGTG ATCCGAATGGGTGTACCTACGGACCACGTCACCTACCAATCATATAATGT ATTGGGACACACGGCGAGGAGGAAGGCAATCACCAACTTTCTCACGAAGC CTGATGGTAGCCTTGAGTGGACCCTCTTTGACATGCCTGCAGGAAAGGAC TTCAGATTCCTCATTTTTGTGAAAATTCGTGATTGCGCTTCTCTTGGCGC CATCTCCTTTCCTATCTCCAGCTTTTATAATAGAGTAAATGATACTTGCC CCTTCGACGGACCTGCTGCCAAAATGCGCATCGTCATGCCCAAAAAAACA AAGGGGAATAGGCGCCCTCCCATGCCCACAGGATGTCCTACCCCGGCTCC CACCATTGCTCCCAGTGCCGCTCCCAGCCTTGCGCCCATCTAA back to top
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