NO04G04340.1, NO04G04340.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G04340.1
Unique Name	NO04G04340.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3885
Alignment location	chr4:1172520..1177615 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:1172520..1177615 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G04340.1 vs.
Match: EWM28725.1 (PsbB mRNA maturation factor [Nannochloropsis gaditana])

HSP 1 Score: 984.6 bits (2544), Expect = 2.200e-283
Identity = 593/970 (61.13%), Postives = 695/970 (71.65%), Query Frame = 0

Query:    1 MAVSRRRRRPGSPLSVTKAAVVVLLNA--TLSATASSSSPHSSSFQPP--LHGGAFIPPGAGAAYSRWWQRTITTTSSSSGSSCGVSSSSSSDRITKGRRDEDSILGSAASHCNIIPSLFPSCSSTSTLLLATAKTRTDPSAAQFSAPSSSSSAPPPLISTTITASSSTTASKPSTKSRSSSSGGGSSSKPGLLYVLQGVHDRETIRSSSEEEADRAVAAVGLKGRSNAPLSSLDKAKACMPRLKKATGEGRKKGEKSMKEMADEVEARLAGDYEEEEEEEDEDAFSTRRAAAAAASTEEEEDEDEEEGSKEEPGPPLPYLPTHAEDLEAKMTAAEASSSSLDFLSKALSERMLEEKFDNVRAPYREPKRPKPLPYQLDLLSYYAKEALKKRNIPEAVRIYKRCVELDRYDGRAYIGLARIEGRRRNTTAARAIYEEGLKWCGENSFVLQAYGVFEQKNGDLRKAMELFDAAIKQGPRHSASWLAKAQLLWELGRKREARECFQTAVQSNTDNEVLWHAWGVAEKRDGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELRNQDLAVDLYQNALKAFPNSSHTYQAWACLEKERGNWDLAFSLFRSGIEKRPWDGGAYQPYALALKERGEMASAMEVFQKGLLEDPYHCPLYQAFGMLLAELGRVDAARVIFERGTTTNPRGRHVYYIWHAWAVMEEKNGNFELARRYFRKALECQSRSIPTLIALAQLEEMDGNVGGCRELYERVLLIRPQAEVYWTQYEEMERRLGHVDHARRIDQRRNLAFGGFGGG--LGGRGG------GGRGEGGEEEGGS-----------YALPRRTMEEEEGRGGGREGGEVERGGREGGSSSTSMSSSSSSSSSSWRSGGEGERGGGGGGGESSQQQKQQQQLQQQQQQQRGRIGGNPGGSSPSLPLRQQQKDDLSAFDTFLEGGGAGGGMGLGRGEGPQRRNVTLGIA 948
            M  SRRRRRPGS + VT    V+LL+   T +A +SSS+P  ++  PP  LH GAF+ P       RW                G  S S+SD  T+ +  ED+      S CN + +   S S + TL+L  +  RTD   +  +AP+   +   P IS   T  +     K S  +  +S+      KPGLLYVLQGV DRETIR SSE EA+RAVA VGLKG+SNAPLSSL++AKA MPRL++               +A+EVE  + G+     ++EDE A + R           E D  EEEG+ EE GPPLPYLP+ AEDLEAK+  AE +S+SL+ LSKA++ERMLEEKFDNVRAPYREP+ PKPLPYQLDLL+YYAKEAL+KRN+PEA RIY+RC+ELDRYDGRAYIGLARIEGRRRN TAA+A+YEE L+WC +N FVLQAYGVF+Q+NG+LRKAMELFDAAI+ GP+HSA+WL KAQLLWELGRKREAR  FQTAVQSN +NEVLWHAWGVAE+R+GNFGVARKLLRKATEINPRNSFCWHAWAVMEQEL N DLAVDLYQNALKAFPNSSHTYQAWACLEK+RGNW+LAFSLFRSGI KRPWDGGAYQPYALALKERGEM +AME+FQKGL EDPYHCPLYQAFGMLLAELGR DAAR IFERGT TNPRGRHVYYIWHAWAVMEEK+GNFELARRYFRKALE QSRS+PTL+ALAQLEEM+GNV GCRELYERVLLIRP+AE+YWTQYE MERR GHV+HA RI+QRR+LAFGG  GG   GG GG      GGRG  G ++G             YALPR TMEEE+GR  GR  G +  GG++            +  S  WR+ G+ +      G E+ ++Q++ +    ++Q QRGRIGG+  G  P  P  ++ ++D   FDTFLEGG    G       G    NVTLGIA
Sbjct:    1 MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRPLHQGAFLSPRTPF---RW----------------GSKSRSNSDS-TQTKPSEDAF----CSTCNFMAA---SVSFSPTLVLPAS--RTDDVTSPHAAPADPPADFAPPISPPGT--NLMKGGKGSIGNSKNSNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPLSSLERAKARMPRLEE--------------RVAEEVEGSV-GETGWGNQDEDEGAGTVRMGY-------REGDVAEEEGT-EEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQRRHLAFGGKSGGGPHGGGGGTRDAKQGGRGVEGYDKGSRMMGLFDSFQEVYALPRGTMEEEKGR--GRIWGPL--GGKD-----------RAKRSVGWRADGQSK------GREADEEQEEAE--HSREQPQRGRIGGSATGVFPP-PSPRRSREDAPVFDTFLEGGFTREG-----ETGQLHGNVTLGIA 887

The following BLAST results are available for this feature:

BLAST of NO04G04340.1 vs.

BLAST of NO04G04340.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28725.1	2.200e-283	61.13	PsbB mRNA maturation factor [Nannochloropsis gadit...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G04340	NO04G04340	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04340.1	NO04G04340.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G04340.1.cds1	NO04G04340.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04340.1.cds2	NO04G04340.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04340.1.cds3	NO04G04340.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04340.1.cds4	NO04G04340.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04340.1.cds5	NO04G04340.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04340.1.cds6	NO04G04340.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04340.1.cds7	NO04G04340.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G04340.1.cds8	NO04G04340.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:1172520..1177615-
coding sequence from alignment at chr4:1172520..1177615-

mRNA sequence

>NO04G04340.1 ID=NO04G04340.1|Name=NO04G04340.1|organism=Nannochloropsis oceanica|type=mRNA|length=3885bp
GAACGGCTCGTGCCATGGCGCTGTGTATTGCATGTTTGGTGTAGGTTTGG
GAAAGAGAGGGGGAAGATGGATGAGCGAGAGGTGCAACAAGGCACGGAAG
ATAGCAATGGAGTGGGGGTGTGTGGCTGAGAGCCAATCTGATCTATTGTC
ATGAGGCCATCGTACATCCCTCCCCGCCACACTATGCAATACGGGCACTA
CAAGGTCTTGACGTGGAAGTTGCTATAATGTGCGAGGAGGGCTTTATCTT
CTAGTTGCCGTGCCCTAGGCGTGGGCGTGGTTGGCGTGTGGGCAAGAGCC
TCAGCCGCTATTGGACTTTGTGCGAAATCACATGATACTCACCGAGCGTG
CCCTCGGCCTCTCTCTAATGCGCCATGCGCTACATAAACCTCGCCACCTC
ACGAACCTTCATACAGTATAGGCATCACCTTCTCGAGTGTCTACGCTGTG
CGACATTCAAGCTTTTTGGGGTCTTTGATTTTCACTTATCCGAACGATAT
CGATCCGGAGAGCCTCCCCGCTACGACTCAGTCGATTTGCTGCCTTCTCC
CTTAATTGACTTGCACCTGTCCCTGGCCTCTGCCGACTGGCTTTCCTTTC
ATTCTCTCACTTCCGAGCCACATTTCACACAGGCAGGGAGATGGCAGTGT
CAAGGAGAAGACGGAGACCAGGTTCCCCTCTCTCTGTCACGAAGGCCGCT
GTCGTCGTCCTCCTAAACGCGACCTTATCAGCAACAGCATCATCATCATC
ACCACATTCTTCCTCTTTCCAACCACCACTGCACGGCGGGGCTTTCATCC
CCCCAGGCGCTGGCGCTGCCTATTCCCGATGGTGGCAAAGGACGATCACC
ACCACCAGTAGCAGTAGCGGCAGCAGCTGTGGCGTCAGTAGCAGCAGCAG
CAGCGATAGAATAACAAAGGGAAGACGGGACGAGGACAGCATTTTAGGAA
GCGCAGCATCACACTGTAATATAATTCCTTCCTTGTTCCCTTCCTGCTCC
TCCACCTCGACCCTCCTACTCGCCACAGCCAAGACACGCACGGACCCTTC
AGCGGCACAGTTTTCTGCCCCCTCCTCATCCTCGTCTGCTCCCCCTCCCC
TCATTTCTACCACCATCACGGCCAGCAGCAGCACCACTGCGTCAAAACCC
AGCACCAAAAGCAGGAGCAGCAGCAGCGGCGGCGGTAGCAGCAGCAAACC
TGGCTTGCTCTACGTGTTGCAAGGTGTTCATGATAGGGAGACAATACGGA
GCAGCAGCGAGGAGGAAGCTGATCGTGCAGTGGCAGCAGTGGGACTTAAG
GGGAGAAGCAATGCCCCTCTTTCGTCTTTGGATAAGGCCAAGGCATGCAT
GCCGAGGTTGAAGAAAGCGACGGGGGAGGGAAGAAAGAAGGGAGAGAAGA
GCATGAAAGAGATGGCAGATGAAGTCGAAGCACGACTCGCCGGAGACTAC
GAGGAGGAGGAGGAGGAGGAGGATGAGGATGCCTTTTCCACCAGAAGAGC
TGCCGCCGCAGCAGCTTCCACGGAGGAGGAGGAGGACGAGGACGAGGAGG
AAGGTTCCAAAGAGGAACCCGGGCCTCCGTTGCCTTACCTCCCGACGCAC
GCCGAAGACCTGGAAGCGAAGATGACGGCAGCGGAGGCGTCTTCCTCCTC
CCTGGATTTCCTGTCCAAAGCCTTGTCGGAGCGCATGCTGGAGGAAAAAT
TTGACAATGTCCGCGCTCCCTACCGAGAGCCGAAACGGCCGAAACCGCTC
CCTTATCAGTTAGATTTACTCTCGTACTATGCGAAGGAAGCGTTGAAGAA
GAGGAACATCCCAGAGGCCGTGAGGATCTATAAGAGATGCGTGGAGCTGG
ACCGGTACGACGGGAGGGCTTACATCGGCCTGGCGCGGATAGAGGGGCGG
CGGAGAAACACCACGGCGGCGAGGGCGATATACGAAGAGGGCCTCAAGTG
GTGTGGGGAGAACTCGTTTGTGTTGCAGGCGTATGGCGTGTTTGAGCAGA
AGAACGGGGATCTACGCAAGGCGATGGAGCTCTTCGATGCTGCCATCAAG
CAGGGCCCTCGGCATTCGGCGTCCTGGCTGGCCAAAGCCCAATTACTGTG
GGAATTGGGTCGGAAACGAGAGGCCCGCGAATGCTTCCAAACCGCCGTGC
AGAGCAACACGGACAACGAGGTGCTATGGCACGCGTGGGGAGTGGCCGAG
AAGCGGGATGGAAATTTCGGCGTGGCCCGGAAACTGCTTCGGAAGGCGAC
TGAGATCAACCCCAGAAACTCGTTCTGCTGGCATGCTTGGGCCGTGATGG
AACAAGAGCTTCGCAATCAGGACCTGGCCGTCGACCTCTATCAAAACGCC
TTGAAAGCCTTTCCCAACAGCAGCCACACCTATCAAGCGTGGGCCTGTCT
CGAGAAAGAGCGAGGGAACTGGGATTTAGCGTTTTCTCTCTTCCGCTCGG
GCATCGAGAAACGGCCGTGGGATGGCGGGGCGTACCAGCCGTATGCCCTG
GCGCTGAAGGAGAGGGGGGAGATGGCTAGTGCGATGGAGGTGTTTCAGAA
GGGTCTGCTGGAGGATCCGTACCACTGCCCGCTTTACCAGGCCTTCGGCA
TGCTTCTCGCGGAGTTGGGGAGGGTAGATGCGGCAAGAGTCATCTTCGAG
CGCGGCACCACCACCAACCCCCGGGGTCGACATGTTTACTACATCTGGCA
TGCCTGGGCTGTTATGGAAGAGAAGAACGGTAATTTCGAGCTCGCCCGCC
GCTACTTTCGCAAGGCCCTCGAGTGCCAATCCCGCTCCATCCCTACCCTG
ATCGCCCTGGCGCAGCTGGAGGAGATGGACGGGAACGTGGGTGGATGTCG
TGAGCTTTATGAGCGGGTCTTGCTGATTAGGCCTCAGGCGGAGGTGTATT
GGACGCAGTATGAAGAGATGGAGAGGAGGTTAGGACATGTGGATCATGCA
CGCAGGATCGATCAAAGAAGGAATCTGGCTTTTGGGGGGTTTGGGGGAGG
ACTAGGAGGAAGGGGAGGGGGAGGAAGGGGGGAGGGAGGGGAAGAGGAGG
GGGGATCGTATGCTCTGCCGAGGAGAACGATGGAGGAGGAGGAGGGTAGG
GGAGGGGGCAGGGAAGGAGGAGAGGTGGAAAGAGGGGGGAGAGAGGGGGG
CAGCAGTAGTACCAGTATGAGTAGTAGTAGTAGTAGCAGCAGCAGTAGCT
GGAGAAGTGGTGGAGAGGGGGAAAGAGGGGGTGGTGGAGGAGGTGGGGAG
TCATCACAGCAACAGAAGCAACAGCAACAATTGCAGCAACAGCAACAGCA
GCAAAGGGGGAGAATAGGAGGGAATCCAGGAGGATCTTCTCCGTCGCTGC
CGTTGAGGCAGCAGCAGAAGGACGACTTGTCTGCGTTTGATACCTTCTTG
GAGGGGGGAGGAGCGGGGGGAGGGATGGGGTTAGGAAGGGGGGAAGGACC
GCAGAGGCGGAATGTGACACTGGGAATTGCATAAAGAGCATTGAGGAGGA
AGACAAGGAGAAGAAGAGAAAGACAGGCGTTGTGCAGATAAATTTAAGCG
ATTGGCGAGACATTCCTGAGATAGATTGAGCGTGCCGGTGCACGAGCAAT
TATGGGAGAGGATGGTTGCCGGGAAGAAAAGACGGTAAAACACATTTAGA
AGAAGAGGAGGTCGAAGAGATGAAGGAAGAACAAGCAGAGAAGTGGAGAA
GCAGAGGAGAGGTTAGGGTTAGGGAGGGAGAAGGAGACGATGCAGTTGAA
GAAGTGAGGAAGGAGAGGAAGAAGAGGCAGAATGAAAGAAAGAAATAGGA
AAGAAGACAGAGGAGGAACGAAAAGAATTCACTGGTAAAAATGGGGGAGG
AAACAGTGAAGAGGAATACAAGGCCATGTGAAATG

protein sequence of NO04G04340.1

>NO04G04340.1-protein ID=NO04G04340.1-protein|Name=NO04G04340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=948bp
MAVSRRRRRPGSPLSVTKAAVVVLLNATLSATASSSSPHSSSFQPPLHGG
AFIPPGAGAAYSRWWQRTITTTSSSSGSSCGVSSSSSSDRITKGRRDEDS
ILGSAASHCNIIPSLFPSCSSTSTLLLATAKTRTDPSAAQFSAPSSSSSA
PPPLISTTITASSSTTASKPSTKSRSSSSGGGSSSKPGLLYVLQGVHDRE
TIRSSSEEEADRAVAAVGLKGRSNAPLSSLDKAKACMPRLKKATGEGRKK
GEKSMKEMADEVEARLAGDYEEEEEEEDEDAFSTRRAAAAAASTEEEEDE
DEEEGSKEEPGPPLPYLPTHAEDLEAKMTAAEASSSSLDFLSKALSERML
EEKFDNVRAPYREPKRPKPLPYQLDLLSYYAKEALKKRNIPEAVRIYKRC
VELDRYDGRAYIGLARIEGRRRNTTAARAIYEEGLKWCGENSFVLQAYGV
FEQKNGDLRKAMELFDAAIKQGPRHSASWLAKAQLLWELGRKREARECFQ
TAVQSNTDNEVLWHAWGVAEKRDGNFGVARKLLRKATEINPRNSFCWHAW
AVMEQELRNQDLAVDLYQNALKAFPNSSHTYQAWACLEKERGNWDLAFSL
FRSGIEKRPWDGGAYQPYALALKERGEMASAMEVFQKGLLEDPYHCPLYQ
AFGMLLAELGRVDAARVIFERGTTTNPRGRHVYYIWHAWAVMEEKNGNFE
LARRYFRKALECQSRSIPTLIALAQLEEMDGNVGGCRELYERVLLIRPQA
EVYWTQYEEMERRLGHVDHARRIDQRRNLAFGGFGGGLGGRGGGGRGEGG
EEEGGSYALPRRTMEEEEGRGGGREGGEVERGGREGGSSSTSMSSSSSSS
SSSWRSGGEGERGGGGGGGESSQQQKQQQQLQQQQQQQRGRIGGNPGGSS
PSLPLRQQQKDDLSAFDTFLEGGGAGGGMGLGRGEGPQRRNVTLGIA*

mRNA from alignment at chr4:1172520..1177615-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G04340.1 ID=NO04G04340.1|Name=NO04G04340.1|organism=Nannochloropsis oceanica|type=mRNA|length=5096bp|location=Sequence derived from alignment at chr4:1172520..1177615- (Nannochloropsis oceanica)
GAACGGCTCGTGCCATGGCGCTGTGTATTGCATGTTTGGTGTAGGTTTGG
GAAAGAGAGGGGGAAGATGGATGAGCGAGAGGTGCAACAAGGCACGGAAG
ATAGCAATGGAGTGGGGGTGTGTGGCTGAGAGCCAATCTGATCTATTGTC
ATGAGGCCATCGTACATCCCTCCCCGCCACACTATGCAATACGGGCACTA
CAAGGTCTTGACGTGGAAGTTGCTATAATGTGCGAGGAGGGCTTTATCTT
CTAGTTGCCGTGCCCTAGGCGTGGGCGTGGTTGGCGTGTGGGCAAGAGCC
TCAGCCGCTATTGGACTTTGTGCGAAATCACATGATACTCACCGAGCGTG
CCCTCGGCCTCTCTCTAATGCGCCATGCGCTACATAAACCTCGCCACCTC
ACGAACCTTCATACAGTATAGGCATCACCTTCTCGAGTGTCTACGCTGTG
CGACATTCAAGCTTTTTGGGGTCTTTGATTTTCACTTATCCGAACGATAT
CGATCCGGAGAGCCTCCCCGCTACGACTCAGTCGATTTGCTGCCTTCTCC
CTTAATTGACTTGCACCTGTCCCTGGCCTCTGCCGACTGGCTTTCCTTTC
ATTCTCTCACTTCCGAGCCACATTTCACACAGGCAGGGAGATGGCAGTGT
CAAGGAGAAGACGGAGACCAGGTTCCCCTCTCTCTGTCACGAAGGCCGCT
GTCGTCGTCCTCCTAAACGCGACCTTATCAGCAACAGCATCATCATCATC
ACCACATTCTTCCTCTTTCCAACCACCACTGGTACGTCTTATGTGTCCAA
TCCCATCTCCTCTCTCTCTTCGTGGGTATCGGAAGGATGGAATGGGACAG
TGGTGTCCCTATCCCCGCAAGTAATTTTCTAATCACCCTTTTTTCCTTTC
CGATCCGCACACAGCACGGCGGGGCTTTCATCCCCCCAGGCGCTGGCGCT
GCCTATTCCCGATGGTGGCAAAGGACGATCACCACCACCAGTAGCAGTAG
CGGCAGCAGCTGTGGCGTCAGTAGCAGCAGCAGCAGCGATAGAATAACAA
AGGGAAGACGGGACGAGGACAGCATTTTAGGAAGCGCAGCATCACACTGT
AATATAATTCCTTCCTTGTTCCCTTCCTGCTCCTCCACCTCGACCCTCCT
ACTCGCCACAGCCAAGACACGCACGGACCCTTCAGCGGCACAGTTTTCTG
CCCCCTCCTCATCCTCGTCTGCTCCCCCTCCCCTCATTTCTACCACCATC
ACGGCCAGCAGCAGCACCACTGCGTCAAAACCCAGCACCAAAAGCAGGAG
CAGCAGCAGCGGCGGCGGTAGCAGCAGCAAACCTGGCTTGCTCTACGTGT
TGCAAGGTGTTCATGATAGGGAGACAATACGGAGCAGCAGCGAGGAGGAA
GCTGATCGTGCAGTGGCAGCAGTGGGACTTAAGGGGAGAAGCAATGCCCC
TCTTTCGTCTTTGGATAAGGCCAAGGCATGCATGCCGAGGTTGAAGAAAG
CGACGGGGGAGGGAAGAAAGAAGGGAGAGAAGAGCATGAAAGAGATGGCA
GATGAAGTCGAAGCACGACTCGCCGGAGACTACGAGGAGGAGGAGGAGGA
GGAGGATGAGGATGCCTTTTCCACCAGAAGAGCTGCCGCCGCAGCAGCTT
CCACGGAGGAGGAGGAGGACGAGGACGAGGAGGAAGGTTCCAAAGAGGAA
CCCGGGCCTCCGTTGCCTTACCTCCCGACGCACGCCGAAGACCTGGAAGC
GAAGATGACGGCAGCGGAGGCGTCTTCCTCCTCCCTGGATTTCCTGTCCA
AAGCCTTGTCGGAGCGCATGCTGGAGGAAAAATTTGACAATGTCCGCGCT
CCCTACCGAGAGCCGAAACGGCCGAAACCGCTCCCTTATCAGTTAGATTT
ACTCTCGTACTATGCGAAGGAAGCGTTGAAGAAGAGGAACATCCCAGAGG
CCGTGAGGATCTATAAGAGATGCGTGGAGCTGGACCGGTACGACGGGAGG
GCTTACATCGGCCTGGCGCGGATAGAGGGGCGGCGGAGAAACACCACGGC
GGCGAGGGCGATATACGAAGAGGGCCTCAAGTGGTGTGGGGAGAACTCGT
TTGTGTTGCAGGCGTATGGCGTGTTTGAGCAGAAGAACGGGGTACGTGCC
AAGCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGTCCCGCCGTCCCT
CCCTCCCTCCGTTCCTCCCTCCCTTTCCCCCGAAACACAGGAAACACAGA
ACTCATCCCGTCCTCTCTCCTTTTCTCCCTCCCTCCTCCCTCTTTTCCTC
CCCCCTCCTTTCTTCCTTGCCCATCAACACAGGATCTACGCAAGGCGATG
GAGCTCTTCGATGCTGCCATCAAGCAGGGCCCTCGGCATTCGGCGTCCTG
GCTGGCCAAAGCCCAATTACTGTGGGAATTGGGTCGGAAACGAGAGGCCC
GCGAATGCTTCCAAACCGCCGTGCAGAGCAACACGGACAACGAGGTGCTA
TGGCACGCGTGGGGAGTGGCCGAGAAGCGGGATGGAAATTTCGGCGTGGC
CCGGAAACTGCTTCGGAAGGCGACTGAGATCAACCCCAGGCAAGCGAAGG
CCCATCGGTTCGAAACGAATTCACGTCGTTCTCGACCTAGATTTTCTCTC
CCCTCTCCCTTGTGTCGCTCTCTGTCCTCTGATCGATCTCCCCGCGCCTC
ACTTCCCCCCCCTCCCTCCTTCCTTGTAGAAACTCGTTCTGCTGGCATGC
TTGGGCCGTGATGGAACAAGAGCTTCGCAATCAGGACCTGGCCGTCGACC
TCTATCAAAACGCCTTGAAAGTGAGAAAGAGAGGGAGGGAGGGAGCGAGG
GAGGGAGGGAGCGGGCAGGTCCAAATTGGGAGTAGTGTTATCGTGAGACG
TACGGTCACACTCAACTCTTCTCCTACCCTCCTCCCTCCTTCCCTCCCTT
CCTCTTTCAGGCCTTTCCCAACAGCAGCCACACCTATCAAGCGTGGGCCT
GTCTCGAGAAAGAGCGAGGGAACTGGGATTTAGCGTTTTCTCTCTTCCGC
TCGGGCATCGAGAAACGGCCGTGGGATGGCGGGGCGTACCAGCCGTATGC
CCTGGCGCTGAAGGAGAGGGGGGAGATGGCTAGTGCGATGGAGGTGTTTC
AGAAGGGTCTGCTGGAGGATCCGTACCACTGCCCGCTTTACCAGGTGCGT
GCTTATATCCTCATTTTCTTAATTTGGTTCGTGAAGCATTTATAAACAAT
AATTATAATTTTTATTCTTGTTGTTTTTTTGTTTTTTGGGGGCTTTTTCT
AATTCCGTTCCCATCCCTTGCGCGATTCATTTTCTCCTTTCCTCATCACG
CTGCCTAACACATCATCCCTCCCCTCCCCCCCTTCCTTCCTCCCTTCCTC
CCTCTCCAACAGGCCTTCGGCATGCTTCTCGCGGAGTTGGGGAGGGTAGA
TGCGGCAAGAGTCATCTTCGAGCGCGGCACCACCACCAACCCCCGGGGTC
GACATGTTTACTACATCTGGCATGCCTGGGCTGTTATGGAAGAGAAGAAC
GGTAAGCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTTCTTCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCGCTTCCCCCCTCATTTTCCGC
CGTTACGCACATTTTGTCCCATTTCACTTCATCTCCTCCCACGCGTGTGT
CATAAATACACAAGGTTACTTCTTCGACCTCCCTTCTTTCCCTTTTTTCA
TATTTTTCTCCCTTTCTCCTTTTCCCTTTGGAAATCAAACACACGCTGCG
AGGAGAAACGAAACATCCAACAACTCCCTCCTCCCTTCTCCCCCCCCCCT
TCCTCCCTCCCTCCCTCCCTCCCTGCCCCAGGTAATTTCGAGCTCGCCCG
CCGCTACTTTCGCAAGGCCCTCGAGTGCCAATCCCGCTCCATCCCTACCC
TGATCGCCCTGGCGCAGCTGGAGGAGATGGACGGGAACGTGGGTGGATGT
CGTGAGCTTTATGAGCGGGTCTTGCTGATTAGGCCTCAGGCGGAGGTGTA
TTGGACGCAGTATGAAGAGATGGAGAGGAGGTTAGGACATGTGGATCATG
CACGCAGGATCGATCAAAGAAGGAATCTGGCTTTTGGGGGGTTTGGGGGA
GGACTAGGAGGAAGGGGAGGGGGAGGAAGGGGGGAGGGAGGGGAAGAGGA
GGGGGGTGAGGGGGGGGCTACGGGAGAGGGAGTCGGATGAAGGGGCTCTT
TGACTCTTTCCAAGGATCGTATGCTCTGCCGAGGAGAACGATGGAGGAGG
AGGAGGGTAGGGGAGGGGGCAGGGAAGGAGGAGAGGTGGAAAGAGGGGGG
AGAGAGGGGGGCAGCAGTAGTACCAGTATGAGTAGTAGTAGTAGTAGCAG
CAGCAGTAGCTGGAGAAGTGGTGGAGAGGGGGAAAGAGGGGGTGGTGGAG
GAGGTGGGGAGTCATCACAGCAACAGAAGCAACAGCAACAATTGCAGCAA
CAGCAACAGCAGCAAAGGGGGAGAATAGGAGGGAATCCAGGAGGATCTTC
TCCGTCGCTGCCGTTGAGGCAGCAGCAGAAGGACGACTTGTCTGCGTTTG
ATACCTTCTTGGAGGGGGGAGGAGCGGGGGGAGGGATGGGGTTAGGAAGG
GGGGAAGGACCGCAGAGGCGGAATGTGACACTGGGAATTGCATAAAGAGC
ATTGAGGAGGAAGACAAGGAGAAGAAGAGAAAGACAGGCGTTGTGCAGAT
AAATTTAAGCGATTGGCGAGACATTCCTGAGATAGATTGAGCGTGCCGGT
GCACGAGCAATTATGGGAGAGGATGGTTGCCGGGAAGAAAAGACGGTAAA
ACACATTTAGAAGAAGAGGAGGTCGAAGAGATGAAGGAAGAACAAGCAGA
GAAGTGGAGAAGCAGAGGAGAGGTTAGGGTTAGGGAGGGAGAAGGAGACG
ATGCAGTTGAAGAAGTGAGGAAGGAGAGGAAGAAGAGGCAGAATGAAAGA
AAGAAATAGGAAAGAAGACAGAGGAGGAACGAAAAGAATTCACTGGTAAA
AATGGGGGAGGAAACAGTGAAGAGGAATACAAGGCCATGTGAAATG

Coding sequence (CDS) from alignment at chr4:1172520..1177615-

>NO04G04340.1 ID=NO04G04340.1|Name=NO04G04340.1|organism=Nannochloropsis oceanica|type=CDS|length=2844bp|location=Sequence derived from alignment at chr4:1172520..1177615- (Nannochloropsis oceanica)
ATGGCAGTGTCAAGGAGAAGACGGAGACCAGGTTCCCCTCTCTCTGTCAC
GAAGGCCGCTGTCGTCGTCCTCCTAAACGCGACCTTATCAGCAACAGCAT
CATCATCATCACCACATTCTTCCTCTTTCCAACCACCACTGCACGGCGGG
GCTTTCATCCCCCCAGGCGCTGGCGCTGCCTATTCCCGATGGTGGCAAAG
GACGATCACCACCACCAGTAGCAGTAGCGGCAGCAGCTGTGGCGTCAGTA
GCAGCAGCAGCAGCGATAGAATAACAAAGGGAAGACGGGACGAGGACAGC
ATTTTAGGAAGCGCAGCATCACACTGTAATATAATTCCTTCCTTGTTCCC
TTCCTGCTCCTCCACCTCGACCCTCCTACTCGCCACAGCCAAGACACGCA
CGGACCCTTCAGCGGCACAGTTTTCTGCCCCCTCCTCATCCTCGTCTGCT
CCCCCTCCCCTCATTTCTACCACCATCACGGCCAGCAGCAGCACCACTGC
GTCAAAACCCAGCACCAAAAGCAGGAGCAGCAGCAGCGGCGGCGGTAGCA
GCAGCAAACCTGGCTTGCTCTACGTGTTGCAAGGTGTTCATGATAGGGAG
ACAATACGGAGCAGCAGCGAGGAGGAAGCTGATCGTGCAGTGGCAGCAGT
GGGACTTAAGGGGAGAAGCAATGCCCCTCTTTCGTCTTTGGATAAGGCCA
AGGCATGCATGCCGAGGTTGAAGAAAGCGACGGGGGAGGGAAGAAAGAAG
GGAGAGAAGAGCATGAAAGAGATGGCAGATGAAGTCGAAGCACGACTCGC
CGGAGACTACGAGGAGGAGGAGGAGGAGGAGGATGAGGATGCCTTTTCCA
CCAGAAGAGCTGCCGCCGCAGCAGCTTCCACGGAGGAGGAGGAGGACGAG
GACGAGGAGGAAGGTTCCAAAGAGGAACCCGGGCCTCCGTTGCCTTACCT
CCCGACGCACGCCGAAGACCTGGAAGCGAAGATGACGGCAGCGGAGGCGT
CTTCCTCCTCCCTGGATTTCCTGTCCAAAGCCTTGTCGGAGCGCATGCTG
GAGGAAAAATTTGACAATGTCCGCGCTCCCTACCGAGAGCCGAAACGGCC
GAAACCGCTCCCTTATCAGTTAGATTTACTCTCGTACTATGCGAAGGAAG
CGTTGAAGAAGAGGAACATCCCAGAGGCCGTGAGGATCTATAAGAGATGC
GTGGAGCTGGACCGGTACGACGGGAGGGCTTACATCGGCCTGGCGCGGAT
AGAGGGGCGGCGGAGAAACACCACGGCGGCGAGGGCGATATACGAAGAGG
GCCTCAAGTGGTGTGGGGAGAACTCGTTTGTGTTGCAGGCGTATGGCGTG
TTTGAGCAGAAGAACGGGGATCTACGCAAGGCGATGGAGCTCTTCGATGC
TGCCATCAAGCAGGGCCCTCGGCATTCGGCGTCCTGGCTGGCCAAAGCCC
AATTACTGTGGGAATTGGGTCGGAAACGAGAGGCCCGCGAATGCTTCCAA
ACCGCCGTGCAGAGCAACACGGACAACGAGGTGCTATGGCACGCGTGGGG
AGTGGCCGAGAAGCGGGATGGAAATTTCGGCGTGGCCCGGAAACTGCTTC
GGAAGGCGACTGAGATCAACCCCAGAAACTCGTTCTGCTGGCATGCTTGG
GCCGTGATGGAACAAGAGCTTCGCAATCAGGACCTGGCCGTCGACCTCTA
TCAAAACGCCTTGAAAGCCTTTCCCAACAGCAGCCACACCTATCAAGCGT
GGGCCTGTCTCGAGAAAGAGCGAGGGAACTGGGATTTAGCGTTTTCTCTC
TTCCGCTCGGGCATCGAGAAACGGCCGTGGGATGGCGGGGCGTACCAGCC
GTATGCCCTGGCGCTGAAGGAGAGGGGGGAGATGGCTAGTGCGATGGAGG
TGTTTCAGAAGGGTCTGCTGGAGGATCCGTACCACTGCCCGCTTTACCAG
GCCTTCGGCATGCTTCTCGCGGAGTTGGGGAGGGTAGATGCGGCAAGAGT
CATCTTCGAGCGCGGCACCACCACCAACCCCCGGGGTCGACATGTTTACT
ACATCTGGCATGCCTGGGCTGTTATGGAAGAGAAGAACGGTAATTTCGAG
CTCGCCCGCCGCTACTTTCGCAAGGCCCTCGAGTGCCAATCCCGCTCCAT
CCCTACCCTGATCGCCCTGGCGCAGCTGGAGGAGATGGACGGGAACGTGG
GTGGATGTCGTGAGCTTTATGAGCGGGTCTTGCTGATTAGGCCTCAGGCG
GAGGTGTATTGGACGCAGTATGAAGAGATGGAGAGGAGGTTAGGACATGT
GGATCATGCACGCAGGATCGATCAAAGAAGGAATCTGGCTTTTGGGGGGT
TTGGGGGAGGACTAGGAGGAAGGGGAGGGGGAGGAAGGGGGGAGGGAGGG
GAAGAGGAGGGGGGATCGTATGCTCTGCCGAGGAGAACGATGGAGGAGGA
GGAGGGTAGGGGAGGGGGCAGGGAAGGAGGAGAGGTGGAAAGAGGGGGGA
GAGAGGGGGGCAGCAGTAGTACCAGTATGAGTAGTAGTAGTAGTAGCAGC
AGCAGTAGCTGGAGAAGTGGTGGAGAGGGGGAAAGAGGGGGTGGTGGAGG
AGGTGGGGAGTCATCACAGCAACAGAAGCAACAGCAACAATTGCAGCAAC
AGCAACAGCAGCAAAGGGGGAGAATAGGAGGGAATCCAGGAGGATCTTCT
CCGTCGCTGCCGTTGAGGCAGCAGCAGAAGGACGACTTGTCTGCGTTTGA
TACCTTCTTGGAGGGGGGAGGAGCGGGGGGAGGGATGGGGTTAGGAAGGG
GGGAAGGACCGCAGAGGCGGAATGTGACACTGGGAATTGCATAA

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