NO04G02870.1, NO04G02870.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO04G02870.1
Unique NameNO04G02870.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length651
Alignment locationchr4:753361..754261 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:753361..754261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G02870.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02870NO04G02870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO04G02870.1NO04G02870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO04G02870.1.cds1NO04G02870.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G02870.1.cds2NO04G02870.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G02870.1.cds3NO04G02870.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO04G02870.1 ID=NO04G02870.1|Name=NO04G02870.1|organism=Nannochloropsis oceanica|type=mRNA|length=651bp
ATGAGGCAGCCGGAGGACATGACGGAGATTGGGCGGGCGATGCGGGAGGG
CCTAGGAGGTGAAGTGGGTGGACCTGTGGTGCACCAGCGCAAGGCGGTGG
TTATCAAGTCGATTATCCGGAGGGTGATCGTGAAGCAGCTGGAAGTGGTG
TTGGCGGCCGGGGACGGAGAGGACATGTGCGACAATGAGGAGGCTGCGGG
AGGAGGGGGAGACAGGCTCATGCAGCTAACGCTTGGGCAGGCGGTTGCAA
GACGCCCGGCGTCGGCAGGGGCGGCGTTGTTTGGAATGGAGAGTGGCTCC
GACGATAGCGATGCAGAGATGGATCCGTCCCCCTTCGCACGGGCACAGGC
CATCATGGAGGAGTACGGGAAGTGGTGCAAGACGGAGGGGCTTCACAAGG
ACTGGCAGCAAGTGCGTCAGTTGTGGGCGTGTGATGCGGATGGGAAGGCG
GAGAAGAAGGGGGCACGCGAGTTCCCGGCATTGGCGCGGGTGTTTCGGTG
CCTCCTGGGGGTGGCGGTGCTCTCCAAGGAGGAGCTGGTGGAGGCCATCC
CCCCGCGCTTGCGGCGCAAGGAGGACTTCCACAAGTATCACCAGCTGGAC
CCCATTTACAAAACCCGGGAAGACGAGGAGGAGGACATGGACGACTTCTG
A
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protein sequence of NO04G02870.1

>NO04G02870.1-protein ID=NO04G02870.1-protein|Name=NO04G02870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=217bp
MRQPEDMTEIGRAMREGLGGEVGGPVVHQRKAVVIKSIIRRVIVKQLEVV
LAAGDGEDMCDNEEAAGGGGDRLMQLTLGQAVARRPASAGAALFGMESGS
DDSDAEMDPSPFARAQAIMEEYGKWCKTEGLHKDWQQVRQLWACDADGKA
EKKGAREFPALARVFRCLLGVAVLSKEELVEAIPPRLRRKEDFHKYHQLD
PIYKTREDEEEDMDDF*
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mRNA from alignment at chr4:753361..754261+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO04G02870.1 ID=NO04G02870.1|Name=NO04G02870.1|organism=Nannochloropsis oceanica|type=mRNA|length=901bp|location=Sequence derived from alignment at chr4:753361..754261+ (Nannochloropsis oceanica)
ATGAGGCAGCCGGAGGACATGACGGAGATTGGGCGGGCGATGCGGGAGGG
CCTAGGGTTCGAGATCGATTAGCGCTTCGTAGAGGGGCGGTACCACAACC
CCGTGCCCAGCTGCTCCTACCTCTTTGATGCAGCGGTCATGGCGAATCCG
TACTACTCAGAGGTGAAGTGGGTGGACCTGTGGTGCACCAGCGCAAGGCG
GTGGTTATCAAGTCGATTATCCGGAGGGTGATCGTGAAGCAGCTGGAAGT
GGTGTTGGCGGCCGGGGACGGAGAGGACATGTGCGACAATGAGGAGGCTG
CGGGAGGAGGGGGAGACAGGCTCATGCAGCTAACGCTTGGGCAGGCGGTT
GCAAGACGCCCGGCGTCGGCAGGGGCGGCGTTGTTTGGAATGGAGAGTGG
CTCCGACGATAGCGATGCAGAGATGGATCCGTCCCCCTTCGCACGGGCAC
AGGCCATCATGGAGGAGTACGGGAAGTGGTGCAAGACGGAGGGGCTTCAC
AAGGACTGGCAGCAAGTGCGTCAGTTGTGGGCGTGTGATGCGGATGGGAA
GGCGGAGAAGAAGGGGGCACGCGAGTTCCCGGCATTGGCGCGGGTGTTTC
GGTGCCTCCTGGGGGTGGCGGGTCGGCAGTCATCCTGGAGCGGGATTTCA
GCATTGCTGCGAATCTGCTCGCCAACCGCCGGACAATGCTACAGGCAGCC
TATGTTGAGATGATCCTCTTCCTCCACCTCAACCGCGACTTCATCCTGCC
CCTCTCCACCATCCCAGTGCTCTCCAAGGAGGAGCTGGTGGAGGCCATCC
CCCCGCGCTTGCGGCGCAAGGAGGACTTCCACAAGTATCACCAGCTGGAC
CCCATTTACAAAACCCGGGAAGACGAGGAGGAGGACATGGACGACTTCTG
A
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Coding sequence (CDS) from alignment at chr4:753361..754261+

>NO04G02870.1 ID=NO04G02870.1|Name=NO04G02870.1|organism=Nannochloropsis oceanica|type=CDS|length=651bp|location=Sequence derived from alignment at chr4:753361..754261+ (Nannochloropsis oceanica)
ATGAGGCAGCCGGAGGACATGACGGAGATTGGGCGGGCGATGCGGGAGGG
CCTAGGAGGTGAAGTGGGTGGACCTGTGGTGCACCAGCGCAAGGCGGTGG
TTATCAAGTCGATTATCCGGAGGGTGATCGTGAAGCAGCTGGAAGTGGTG
TTGGCGGCCGGGGACGGAGAGGACATGTGCGACAATGAGGAGGCTGCGGG
AGGAGGGGGAGACAGGCTCATGCAGCTAACGCTTGGGCAGGCGGTTGCAA
GACGCCCGGCGTCGGCAGGGGCGGCGTTGTTTGGAATGGAGAGTGGCTCC
GACGATAGCGATGCAGAGATGGATCCGTCCCCCTTCGCACGGGCACAGGC
CATCATGGAGGAGTACGGGAAGTGGTGCAAGACGGAGGGGCTTCACAAGG
ACTGGCAGCAAGTGCGTCAGTTGTGGGCGTGTGATGCGGATGGGAAGGCG
GAGAAGAAGGGGGCACGCGAGTTCCCGGCATTGGCGCGGGTGTTTCGGTG
CCTCCTGGGGGTGGCGGTGCTCTCCAAGGAGGAGCTGGTGGAGGCCATCC
CCCCGCGCTTGCGGCGCAAGGAGGACTTCCACAAGTATCACCAGCTGGAC
CCCATTTACAAAACCCGGGAAGACGAGGAGGAGGACATGGACGACTTCTG
A
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Synonyms
Publications