NO04G01500.1, NO04G01500.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G01500.1
Unique Name	NO04G01500.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3387
Alignment location	chr4:464568..468382 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:464568..468382 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G01500.1 vs.
Match: EWM28576.1 (serine threonine protein [Nannochloropsis gaditana])

HSP 1 Score: 967.6 bits (2500), Expect = 3.300e-278
Identity = 533/897 (59.42%), Postives = 633/897 (70.57%), Query Frame = 0

Query:    1 MWVMNEDGTRDMEDGEEDELASPLTLLRRIFQRDSYALTAGFESLAFTQLLGMQAANELRDFGDDFDGTTYTLFFDLLRAAWKDGRAEVVQQTESLLSYIMTMPEYTPQAASEAITSDLLRAVLSRFDAALETEHTFLRELLHLLYQDFPSARPLLRALIARFLMTFINTGKKSMAVAPLLEVLGQIIKGFAAPLTDVHSRLLLALLLPLHHNDDMYEWRDQIPVIQLYHEPLVFCLTQYLERDRGAFALPIMKELLKSWPEGYRSNTPKEVLCLHEVAALLHFFSDEDFEYILPSLLPRLAHCLASDHSRCVEKALTLWKERVMVGFTTKFAPVMIRGLFSSVFRGGEMHWNVTVNKMRALVLQVLRDADSRVFAEVAGSVGGAGGARREDELREMENKEKGGRKETPQVPPSSTHAYMPRAPRVAASMSFKYDAGGWNPPARGAGGQQQQQQQQPPLTITGVAPWAM--GSDSSGKGSAMGRIGQQQQNGSTGQQTPVTLTGVAPWTMGLSAELGGSASSTSGSGNK-----KRMIVIPPP---LPPASTGGGQRRALPSSMLLEGRR---------------EGWEEGMGGVGATTTGRSSTSSNKNTSSSDFSSTNTASLPPDER--------------KEGLQLVLAFMEKCRPARVAANEQSWHDLQLEPTPTLLPDMRFHDLVFGQELGSGAFSTVKYARHVVKGKTRSSWAEYAVKVIDTARIVELGYERCVDREIAVLRVLAHPGIARMVSSFRWREGVYLVLEYASKGDLHSHLVAHGSLDEASTRFVVGEVVAALRSVHDAGFVYGDLKPENVVITESGHVKVTDFGACRPISPEAKAVLKASRHAMRQLRDGDWRRMAG---EGKGGNGGGQQQQQQEQQQGGGG 856
            +W MN DG+RDME+ EEDE+ASP TLLRRI   DS  +T GFESL+F QLL +QA+NELRDF D+FD  TY LFF LL AAWKDGR +VV  TE LLSY+M MPEY    ASEA++ +LLR+V+SRFD A E EH FLR+ LHLLY+D    RPLLRAL+ARFL  FI+TGKK+MAVAP+LEVLG +IKGFA+PLT +H RL ++LLLPLH N+DMYEWRDQ+PVIQLYHEPLVFCLTQYLERDRG+FALPI+++LLKSWPE + SN+ KEVLCLHE+ ALLH+FSD DF   LP LLPRL+HCLASDHSRCVEKAL LWK+  MVGFT +FA  +IR LF SV+R GE HWNVTVNKMR LVL+  ++AD  VFAEVA   G     RRED+ R  +  E  G+K TP V   S+ A+MP  PR  AS+ +  DA GW PP R +      Q++QPP+TITG+APW    G  S      +   G+QQQ      Q PV +TGVAPW M  +    G   +  G G       +R+   PPP   LPP  +              +GRR               +G  E  G VG    GR ++      +S   ++T +  + PDE               +EGL+ VL FME+ RPA  ++  Q+W+ LQLEPTPTLLP+MRFHDLVFG +LGSGAFSTV+YARHV K KTRS WAE+AVKVIDTAR+VELGYE CV+REIAVLR+L+HPGIARMVSSFRWR+GVYLVLEYASKGDLHS+LVA GSLDE S RFV GEVVAAL SVH+AGFVYGDLKPENVVITESGHVKVTDFGACRP++P A+A L+ASRHA++QLRDGDWR   G    G    G G +   +  Q  GGG
Sbjct:   20 LWTMNADGSRDMEEEEEDEVASPQTLLRRILSCDSCDMTLGFESLSFNQLLSLQASNELRDFADEFDSVTYALFFQLLCAAWKDGRPDVVCITEGLLSYVMAMPEYNSHTASEAVSPELLRSVISRFDGAPEKEHAFLRDFLHLLYRDALKFRPLLRALLARFLAAFIHTGKKTMAVAPVLEVLGHVIKGFASPLTSIHRRLFVSLLLPLHENNDMYEWRDQLPVIQLYHEPLVFCLTQYLERDRGSFALPILRQLLKSWPEKFESNSAKEVLCLHELGALLHYFSDHDFAEALPLLLPRLSHCLASDHSRCVEKALILWKDEAMVGFTMRFASQVIRALFRSVYRDGEKHWNVTVNKMRVLVLKTFQEADGDVFAEVASREGSR--RRREDDGR--DKGEGVGKKATPAV---SSSAHMPPPPRAPASL-YAQDAAGWKPPRRTSATVPGGQRRQPPVTITGMAPWTKREGVASDRLRGGLEHWGRQQQ-----PQPPVVVTGVAPWAMDSNVGYLGPGRTVEGGGKSRNMGHRRLSAQPPPRTSLPPPWSSQSDSPLSQPMEESDGRRGQIDAVLEEEEGEAEDGLREVEGEVGMGRGGRLASEGGGPRTSQATTNTRSKPIDPDESTARGSTIHAALEGGREGLERVLGFMEEFRPAS-SSEGQAWYKLQLEPTPTLLPEMRFHDLVFGHDLGSGAFSTVRYARHVTKDKTRSDWAEFAVKVIDTARLVELGYEACVNREIAVLRLLSHPGIARMVSSFRWRDGVYLVLEYASKGDLHSYLVARGSLDEDSVRFVAGEVVAALCSVHEAGFVYGDLKPENVVITESGHVKVTDFGACRPLTPAARATLRASRHAIQQLRDGDWRSAKGLVAAGGERTGMGNEVGPRAVQPPGGG 902

The following BLAST results are available for this feature:

BLAST of NO04G01500.1 vs.

BLAST of NO04G01500.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28576.1	3.300e-278	59.42	serine threonine protein [Nannochloropsis gaditana...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G01500	NO04G01500	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G01500.1	NO04G01500.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G01500.1.cds1	NO04G01500.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01500.1.cds2	NO04G01500.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01500.1.cds3	NO04G01500.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:464568..468382-
coding sequence from alignment at chr4:464568..468382-

mRNA sequence

>NO04G01500.1 ID=NO04G01500.1|Name=NO04G01500.1|organism=Nannochloropsis oceanica|type=mRNA|length=3387bp
ATGTGGGTCATGAACGAGGATGGGACGCGGGACATGGAGGACGGGGAGGA
AGACGAACTAGCTAGTCCACTGACACTGTTGCGCCGCATTTTCCAGCGCG
ATTCCTATGCCTTGACAGCAGGCTTTGAGTCCCTAGCATTTACTCAACTC
CTCGGTATGCAAGCCGCCAACGAATTACGGGACTTCGGCGACGACTTCGA
CGGCACAACCTACACTCTCTTCTTTGACCTCCTACGCGCCGCTTGGAAGG
ACGGTCGGGCCGAAGTGGTCCAGCAAACCGAATCCCTTCTCTCCTACATC
ATGACCATGCCAGAGTACACTCCCCAAGCTGCCTCCGAGGCCATCACTTC
CGATTTACTTCGCGCGGTTCTCTCCCGCTTCGATGCCGCCCTCGAAACTG
AACACACGTTTTTGCGGGAGCTACTGCACTTGCTCTACCAGGACTTTCCT
TCCGCCCGCCCCCTCCTTCGCGCGCTCATCGCCCGGTTTTTGATGACCTT
TATCAATACTGGCAAGAAGAGTATGGCTGTGGCACCCTTGCTCGAAGTGC
TCGGACAGATAATCAAGGGTTTCGCCGCTCCTCTCACTGATGTCCACAGT
CGCCTCCTCCTCGCCCTCCTCCTTCCCCTGCACCATAATGACGACATGTA
CGAATGGCGGGACCAGATCCCAGTCATCCAGCTCTACCACGAGCCCCTCG
TTTTTTGCTTGACTCAATACCTGGAACGAGACCGTGGGGCATTCGCGCTA
CCCATAATGAAAGAGTTGTTGAAAAGCTGGCCGGAAGGGTACCGAAGCAA
CACGCCCAAAGAAGTTTTATGTCTGCACGAGGTCGCCGCATTGCTTCATT
TCTTTTCGGATGAAGATTTTGAGTATATTCTGCCATCATTGCTTCCCAGG
TTGGCGCACTGCTTGGCATCGGACCACAGCCGGTGCGTGGAGAAGGCTTT
GACGTTGTGGAAGGAAAGGGTGATGGTAGGGTTCACGACGAAATTTGCAC
CGGTGATGATTCGGGGGTTGTTTAGCAGTGTGTTTCGAGGGGGGGAGATG
CATTGGAATGTGACGGTGAATAAAATGAGGGCCTTGGTGTTGCAGGTGCT
AAGGGACGCGGATTCGAGGGTGTTTGCTGAGGTGGCGGGGAGTGTGGGTG
GGGCAGGAGGAGCAAGGAGGGAGGATGAGTTGAGGGAGATGGAGAATAAA
GAGAAGGGAGGAAGGAAGGAGACGCCGCAGGTGCCGCCGTCATCGACCCA
TGCCTACATGCCAAGAGCACCGAGGGTGGCGGCCTCGATGTCCTTTAAGT
ACGACGCAGGAGGCTGGAATCCCCCAGCACGCGGTGCCGGCGGCCAGCAG
CAGCAGCAGCAGCAGCAGCCACCCTTGACAATCACAGGTGTGGCTCCTTG
GGCTATGGGTAGTGATAGCAGTGGTAAAGGTAGTGCAATGGGTCGCATAG
GGCAGCAGCAGCAGAATGGGTCTACTGGGCAGCAGACGCCCGTAACCCTT
ACAGGCGTGGCTCCCTGGACCATGGGCCTGAGCGCAGAGTTAGGTGGCAG
TGCCAGCAGTACCAGCGGTAGCGGTAATAAAAAGAGAATGATTGTGATAC
CTCCACCGCTACCGCCTGCATCAACTGGTGGAGGTCAGCGGCGAGCTCTA
CCGTCGTCTATGCTGCTCGAGGGAAGGAGGGAGGGATGGGAGGAGGGGAT
GGGCGGAGTTGGCGCCACCACAACCGGTAGAAGCAGCACCAGCAGTAACA
AGAACACCAGCAGCAGCGATTTCTCGTCAACCAACACTGCGTCCTTGCCA
CCTGACGAGCGAAAAGAGGGACTGCAACTCGTGTTGGCCTTTATGGAGAA
ATGTCGCCCCGCCCGCGTAGCAGCAAACGAACAGTCCTGGCATGATCTAC
AGTTGGAGCCGACGCCCACTCTACTCCCCGACATGCGCTTTCACGATTTG
GTGTTTGGCCAAGAGTTGGGCTCGGGTGCGTTTAGCACCGTGAAGTATGC
GCGGCACGTAGTTAAGGGAAAGACGAGGAGCAGCTGGGCTGAGTACGCGG
TGAAAGTGATCGATACGGCGAGGATTGTGGAGTTGGGGTACGAGAGGTGT
GTGGACCGTGAGATCGCAGTCTTGCGGGTGTTGGCCCATCCAGGCATTGC
CAGAATGGTCTCGTCGTTTCGGTGGCGTGAGGGGGTGTATTTGGTATTGG
AGTATGCGAGTAAAGGTGATTTGCATTCCCATTTGGTGGCGCATGGGTCG
CTCGATGAGGCCTCGACGAGGTTCGTCGTGGGAGAAGTAGTGGCTGCCTT
GAGGTCTGTGCATGATGCGGGATTTGTGTATGGGGATCTTAAGCCGGAGA
ACGTCGTAATTACGGAGTCGGGGCACGTGAAAGTGACGGATTTCGGGGCT
TGTCGACCGATTTCGCCTGAGGCCAAGGCGGTTTTGAAGGCGAGTCGGCA
TGCGATGCGGCAGTTGAGGGACGGCGATTGGCGACGAATGGCTGGTGAAG
GGAAAGGGGGAAATGGAGGTGGGCAGCAGCAGCAGCAACAGGAGCAGCAG
CAGGGGGGAGGAGGGAATGACGTTGAGTTTTTGAAGGGAGAGAGCGAAGA
GAAGGTGGCATCGATGATTATGGACGTGGAACGAGGTGGTGTAATGAAGG
CAGCGGAAAAGGAAAAGAAAGAGGAGGAGGAGGACGACGACGAGCGCATA
GAAGGTACCTTTGCTTTCTTGCCACCGGAAGTCATCCGTGAGGGTGCAGT
TCCTGACACGCTGGCTGATGCTTGGGCGTTGGGTTGTTTGCTCTACCAGT
GCTTCACTGGCAAACCTCCAGTCTTCAATGAGCACCAGCATGAGGGCGAC
GCAGATATCAAGGCGCGTGTAGTACGCTTCGCGGAGGAACGGCGCTCGAG
CAGCAATGCGCTTTTTGAGGAAAGTACCGGCAGCACCAGCAGCACCAGTA
GTAGTGCTGGCTTGGTCCTGAGTGAAGATGCCAAGAACTTGGTCAAGGAC
CTTTTGACGGTAGAGCGGAGCAAGCGCCTAACCCTCGAGGCCGCAGCCGT
GCATCCTTTCTTCACGGGCCAGGGCATCGACGTGTATGAACTGCACCGAA
ACCCGGCCATTCAGCTGGTCCAAGGAAGTGCCGGGCCGACGCCTGATGCA
GCTTGGAATCGACGTCAATTTTCAGCGATTTGGGCGCCACTTCCGGGGAA
CTACAATTTTGTATCACACTCATATGCCCTGCGACCCATTCCCGAGACGC
CGTTGGAGCGCGGAGCGCCTTTTTCGTTCGAAAATCGCAGGTTTCATGAG
GAGGATGGGTGGATGATGCCGTCGCCTGGGAATGGCAGGGGCCTACCTCT
TCCACCAAAGCCACCAGGGGAGGAGAAGAAAACATGA

protein sequence of NO04G01500.1

>NO04G01500.1-protein ID=NO04G01500.1-protein|Name=NO04G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1129bp
MWVMNEDGTRDMEDGEEDELASPLTLLRRIFQRDSYALTAGFESLAFTQL
LGMQAANELRDFGDDFDGTTYTLFFDLLRAAWKDGRAEVVQQTESLLSYI
MTMPEYTPQAASEAITSDLLRAVLSRFDAALETEHTFLRELLHLLYQDFP
SARPLLRALIARFLMTFINTGKKSMAVAPLLEVLGQIIKGFAAPLTDVHS
RLLLALLLPLHHNDDMYEWRDQIPVIQLYHEPLVFCLTQYLERDRGAFAL
PIMKELLKSWPEGYRSNTPKEVLCLHEVAALLHFFSDEDFEYILPSLLPR
LAHCLASDHSRCVEKALTLWKERVMVGFTTKFAPVMIRGLFSSVFRGGEM
HWNVTVNKMRALVLQVLRDADSRVFAEVAGSVGGAGGARREDELREMENK
EKGGRKETPQVPPSSTHAYMPRAPRVAASMSFKYDAGGWNPPARGAGGQQ
QQQQQQPPLTITGVAPWAMGSDSSGKGSAMGRIGQQQQNGSTGQQTPVTL
TGVAPWTMGLSAELGGSASSTSGSGNKKRMIVIPPPLPPASTGGGQRRAL
PSSMLLEGRREGWEEGMGGVGATTTGRSSTSSNKNTSSSDFSSTNTASLP
PDERKEGLQLVLAFMEKCRPARVAANEQSWHDLQLEPTPTLLPDMRFHDL
VFGQELGSGAFSTVKYARHVVKGKTRSSWAEYAVKVIDTARIVELGYERC
VDREIAVLRVLAHPGIARMVSSFRWREGVYLVLEYASKGDLHSHLVAHGS
LDEASTRFVVGEVVAALRSVHDAGFVYGDLKPENVVITESGHVKVTDFGA
CRPISPEAKAVLKASRHAMRQLRDGDWRRMAGEGKGGNGGGQQQQQQEQQ
QGGGGNDVEFLKGESEEKVASMIMDVERGGVMKAAEKEKKEEEEDDDERI
EGTFAFLPPEVIREGAVPDTLADAWALGCLLYQCFTGKPPVFNEHQHEGD
ADIKARVVRFAEERRSSSNALFEESTGSTSSTSSSAGLVLSEDAKNLVKD
LLTVERSKRLTLEAAAVHPFFTGQGIDVYELHRNPAIQLVQGSAGPTPDA
AWNRRQFSAIWAPLPGNYNFVSHSYALRPIPETPLERGAPFSFENRRFHE
EDGWMMPSPGNGRGLPLPPKPPGEEKKT*

mRNA from alignment at chr4:464568..468382-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G01500.1 ID=NO04G01500.1|Name=NO04G01500.1|organism=Nannochloropsis oceanica|type=mRNA|length=3815bp|location=Sequence derived from alignment at chr4:464568..468382- (Nannochloropsis oceanica)
ATGTGGGTCATGAACGAGGATGGGACGCGGGACATGGAGGACGGGGAGGA
AGACGAACTAGCTAGTCCACTGACACTGTTGCGCCGCATTTTCCAGCGCG
ATTCCTATGCCTTGACAGCAGGCTTTGAGGTATGTAGAACAGAGGCATAC
GGTGGAAAGGAGGGGGGGTGGGCACATGGGTTGACCTGTACCTTTTTTTG
TGTGTGTAAAGTACCCCCCGGAAGTCTACAGCCAATTGCCTGTCCCAACC
AAGTCTATTTAAGCCCAGAAACATACTTTGTTACTTGATCCGTAGCTATG
GCCGCCCAGAGCGTGTCTCTCTTTCCAGTACCGCTCTCTCTTCTCAAGGA
ACCCAGCCACCCTTCTACACGACCCAAACCAAACCCCACCCACCTCTTAC
AGTCCCTAGCATTTACTCAACTCCTCGGTATGCAAGCCGCCAACGAATTA
CGGGACTTCGGCGACGACTTCGACGGCACAACCTACACTCTCTTCTTTGA
CCTCCTACGCGCCGCTTGGAAGGACGGTCGGGCCGAAGTGGTCCAGCAAA
CCGAATCCCTTCTCTCCTACATCATGACCATGCCAGAGTACACTCCCCAA
GCTGCCTCCGAGGCCATCACTTCCGATTTACTTCGCGCGGTTCTCTCCCG
CTTCGATGCCGCCCTCGAAACTGAACACACGTTTTTGCGGGAGCTACTGC
ACTTGCTCTACCAGGACTTTCCTTCCGCCCGCCCCCTCCTTCGCGCGCTC
ATCGCCCGGTTTTTGATGACCTTTATCAATACTGGCAAGAAGAGTATGGC
TGTGGCACCCTTGCTCGAAGTGCTCGGACAGATAATCAAGGGTTTCGCCG
CTCCTCTCACTGATGTCCACAGTCGCCTCCTCCTCGCCCTCCTCCTTCCC
CTGCACCATAATGACGACATGTACGAATGGCGGGACCAGATCCCAGTCAT
CCAGCTCTACCACGAGCCCCTCGTTTTTTGCTTGACTCAATACCTGGAAC
GAGACCGTGGGGCATTCGCGCTACCCATAATGAAAGAGTTGTTGAAAAGC
TGGCCGGAAGGGTACCGAAGCAACACGCCCAAAGAAGTTTTATGTCTGCA
CGAGGTCGCCGCATTGCTTCATTTCTTTTCGGATGAAGATTTTGAGTATA
TTCTGCCATCATTGCTTCCCAGGTTGGCGCACTGCTTGGCATCGGACCAC
AGCCGGTGCGTGGAGAAGGCTTTGACGTTGTGGAAGGAAAGGGTGATGGT
AGGGTTCACGACGAAATTTGCACCGGTGATGATTCGGGGGTTGTTTAGCA
GTGTGTTTCGAGGGGGGGAGATGCATTGGAATGTGACGGTGAATAAAATG
AGGGCCTTGGTGTTGCAGGTGCTAAGGGACGCGGATTCGAGGGTGTTTGC
TGAGGTGGCGGGGAGTGTGGGTGGGGCAGGAGGAGCAAGGAGGGAGGATG
AGTTGAGGGAGATGGAGAATAAAGAGAAGGGAGGAAGGAAGGAGACGCCG
CAGGTGCCGCCGTCATCGACCCATGCCTACATGCCAAGAGCACCGAGGGT
GGCGGCCTCGATGTCCTTTAAGTACGACGCAGGAGGCTGGAATCCCCCAG
CACGCGGTGCCGGCGGCCAGCAGCAGCAGCAGCAGCAGCAGCCACCCTTG
ACAATCACAGGTGTGGCTCCTTGGGCTATGGGTAGTGATAGCAGTGGTAA
AGGTAGTGCAATGGGTCGCATAGGGCAGCAGCAGCAGAATGGGTCTACTG
GGCAGCAGACGCCCGTAACCCTTACAGGCGTGGCTCCCTGGACCATGGGC
CTGAGCGCAGAGTTAGGTGGCAGTGCCAGCAGTACCAGCGGTAGCGGTAA
TAAAAAGAGAATGATTGTGATACCTCCACCGCTACCGCCTGCATCAACTG
GTGGAGGTCAGCGGCGAGCTCTACCGTCGTCTATGCTGCTCGAGGGAAGG
AGGGAGGGATGGGAGGAGGGGATGGGCGGAGTTGGTACGGTGTTGGAAGA
AGGGGGGGGGGGGAGGAGGAAGAAGAAGGCGAAGAGGAGGCAACAAAGAG
CATTGAAATGGACGAGACAAAGAAGACGAAGCGCATGATCATAGAGAAGA
GGCCGTTGGCAATGATGTCTACCCCCACGACGACGACAGGCGCCACCACA
ACCGGTAGAAGCAGCACCAGCAGTAACAAGAACACCAGCAGCAGCGATTT
CTCGTCAACCAACACTGCGTCCTTGCCACCTGACGAGCGAAAAGAGGGAC
TGCAACTCGTGTTGGCCTTTATGGAGAAATGTCGCCCCGCCCGCGTAGCA
GCAAACGAACAGTCCTGGCATGATCTACAGTTGGAGCCGACGCCCACTCT
ACTCCCCGACATGCGCTTTCACGATTTGGTGTTTGGCCAAGAGTTGGGCT
CGGGTGCGTTTAGCACCGTGAAGTATGCGCGGCACGTAGTTAAGGGAAAG
ACGAGGAGCAGCTGGGCTGAGTACGCGGTGAAAGTGATCGATACGGCGAG
GATTGTGGAGTTGGGGTACGAGAGGTGTGTGGACCGTGAGATCGCAGTCT
TGCGGGTGTTGGCCCATCCAGGCATTGCCAGAATGGTCTCGTCGTTTCGG
TGGCGTGAGGGGGTGTATTTGGTATTGGAGTATGCGAGTAAAGGTGATTT
GCATTCCCATTTGGTGGCGCATGGGTCGCTCGATGAGGCCTCGACGAGGT
TCGTCGTGGGAGAAGTAGTGGCTGCCTTGAGGTCTGTGCATGATGCGGGA
TTTGTGTATGGGGATCTTAAGCCGGAGAACGTCGTAATTACGGAGTCGGG
GCACGTGAAAGTGACGGATTTCGGGGCTTGTCGACCGATTTCGCCTGAGG
CCAAGGCGGTTTTGAAGGCGAGTCGGCATGCGATGCGGCAGTTGAGGGAC
GGCGATTGGCGACGAATGGCTGGTGAAGGGAAAGGGGGAAATGGAGGTGG
GCAGCAGCAGCAGCAACAGGAGCAGCAGCAGGGGGGAGGAGGGAATGACG
TTGAGTTTTTGAAGGGAGAGAGCGAAGAGAAGGTGGCATCGATGATTATG
GACGTGGAACGAGGTGGTGTAATGAAGGCAGCGGAAAAGGAAAAGAAAGA
GGAGGAGGAGGACGACGACGAGCGCATAGAAGGTACCTTTGCTTTCTTGC
CACCGGAAGTCATCCGTGAGGGTGCAGTTCCTGACACGCTGGCTGATGCT
TGGGCGTTGGGTTGTTTGCTCTACCAGTGCTTCACTGGCAAACCTCCAGT
CTTCAATGAGCACCAGCATGAGGGCGACGCAGATATCAAGGCGCGTGTAG
TACGCTTCGCGGAGGAACGGCGCTCGAGCAGCAATGCGCTTTTTGAGGAA
AGTACCGGCAGCACCAGCAGCACCAGTAGTAGTGCTGGCTTGGTCCTGAG
TGAAGATGCCAAGAACTTGGTCAAGGACCTTTTGACGGTAGAGCGGAGCA
AGCGCCTAACCCTCGAGGCCGCAGCCGTGCATCCTTTCTTCACGGGCCAG
GGCATCGACGTGTATGAACTGCACCGAAACCCGGCCATTCAGCTGGTCCA
AGGAAGTGCCGGGCCGACGCCTGATGCAGCTTGGAATCGACGTCAATTTT
CAGCGATTTGGGCGCCACTTCCGGGGAACTACAATTTTGTATCACACTCA
TATGCCCTGCGACCCATTCCCGAGACGCCGTTGGAGCGCGGAGCGCCTTT
TTCGTTCGAAAATCGCAGGTTTCATGAGGAGGATGGGTGGATGATGCCGT
CGCCTGGGAATGGCAGGGGCCTACCTCTTCCACCAAAGCCACCAGGGGAG
GAGAAGAAAACATGA

Coding sequence (CDS) from alignment at chr4:464568..468382-

>NO04G01500.1 ID=NO04G01500.1|Name=NO04G01500.1|organism=Nannochloropsis oceanica|type=CDS|length=3387bp|location=Sequence derived from alignment at chr4:464568..468382- (Nannochloropsis oceanica)
ATGTGGGTCATGAACGAGGATGGGACGCGGGACATGGAGGACGGGGAGGA
AGACGAACTAGCTAGTCCACTGACACTGTTGCGCCGCATTTTCCAGCGCG
ATTCCTATGCCTTGACAGCAGGCTTTGAGTCCCTAGCATTTACTCAACTC
CTCGGTATGCAAGCCGCCAACGAATTACGGGACTTCGGCGACGACTTCGA
CGGCACAACCTACACTCTCTTCTTTGACCTCCTACGCGCCGCTTGGAAGG
ACGGTCGGGCCGAAGTGGTCCAGCAAACCGAATCCCTTCTCTCCTACATC
ATGACCATGCCAGAGTACACTCCCCAAGCTGCCTCCGAGGCCATCACTTC
CGATTTACTTCGCGCGGTTCTCTCCCGCTTCGATGCCGCCCTCGAAACTG
AACACACGTTTTTGCGGGAGCTACTGCACTTGCTCTACCAGGACTTTCCT
TCCGCCCGCCCCCTCCTTCGCGCGCTCATCGCCCGGTTTTTGATGACCTT
TATCAATACTGGCAAGAAGAGTATGGCTGTGGCACCCTTGCTCGAAGTGC
TCGGACAGATAATCAAGGGTTTCGCCGCTCCTCTCACTGATGTCCACAGT
CGCCTCCTCCTCGCCCTCCTCCTTCCCCTGCACCATAATGACGACATGTA
CGAATGGCGGGACCAGATCCCAGTCATCCAGCTCTACCACGAGCCCCTCG
TTTTTTGCTTGACTCAATACCTGGAACGAGACCGTGGGGCATTCGCGCTA
CCCATAATGAAAGAGTTGTTGAAAAGCTGGCCGGAAGGGTACCGAAGCAA
CACGCCCAAAGAAGTTTTATGTCTGCACGAGGTCGCCGCATTGCTTCATT
TCTTTTCGGATGAAGATTTTGAGTATATTCTGCCATCATTGCTTCCCAGG
TTGGCGCACTGCTTGGCATCGGACCACAGCCGGTGCGTGGAGAAGGCTTT
GACGTTGTGGAAGGAAAGGGTGATGGTAGGGTTCACGACGAAATTTGCAC
CGGTGATGATTCGGGGGTTGTTTAGCAGTGTGTTTCGAGGGGGGGAGATG
CATTGGAATGTGACGGTGAATAAAATGAGGGCCTTGGTGTTGCAGGTGCT
AAGGGACGCGGATTCGAGGGTGTTTGCTGAGGTGGCGGGGAGTGTGGGTG
GGGCAGGAGGAGCAAGGAGGGAGGATGAGTTGAGGGAGATGGAGAATAAA
GAGAAGGGAGGAAGGAAGGAGACGCCGCAGGTGCCGCCGTCATCGACCCA
TGCCTACATGCCAAGAGCACCGAGGGTGGCGGCCTCGATGTCCTTTAAGT
ACGACGCAGGAGGCTGGAATCCCCCAGCACGCGGTGCCGGCGGCCAGCAG
CAGCAGCAGCAGCAGCAGCCACCCTTGACAATCACAGGTGTGGCTCCTTG
GGCTATGGGTAGTGATAGCAGTGGTAAAGGTAGTGCAATGGGTCGCATAG
GGCAGCAGCAGCAGAATGGGTCTACTGGGCAGCAGACGCCCGTAACCCTT
ACAGGCGTGGCTCCCTGGACCATGGGCCTGAGCGCAGAGTTAGGTGGCAG
TGCCAGCAGTACCAGCGGTAGCGGTAATAAAAAGAGAATGATTGTGATAC
CTCCACCGCTACCGCCTGCATCAACTGGTGGAGGTCAGCGGCGAGCTCTA
CCGTCGTCTATGCTGCTCGAGGGAAGGAGGGAGGGATGGGAGGAGGGGAT
GGGCGGAGTTGGCGCCACCACAACCGGTAGAAGCAGCACCAGCAGTAACA
AGAACACCAGCAGCAGCGATTTCTCGTCAACCAACACTGCGTCCTTGCCA
CCTGACGAGCGAAAAGAGGGACTGCAACTCGTGTTGGCCTTTATGGAGAA
ATGTCGCCCCGCCCGCGTAGCAGCAAACGAACAGTCCTGGCATGATCTAC
AGTTGGAGCCGACGCCCACTCTACTCCCCGACATGCGCTTTCACGATTTG
GTGTTTGGCCAAGAGTTGGGCTCGGGTGCGTTTAGCACCGTGAAGTATGC
GCGGCACGTAGTTAAGGGAAAGACGAGGAGCAGCTGGGCTGAGTACGCGG
TGAAAGTGATCGATACGGCGAGGATTGTGGAGTTGGGGTACGAGAGGTGT
GTGGACCGTGAGATCGCAGTCTTGCGGGTGTTGGCCCATCCAGGCATTGC
CAGAATGGTCTCGTCGTTTCGGTGGCGTGAGGGGGTGTATTTGGTATTGG
AGTATGCGAGTAAAGGTGATTTGCATTCCCATTTGGTGGCGCATGGGTCG
CTCGATGAGGCCTCGACGAGGTTCGTCGTGGGAGAAGTAGTGGCTGCCTT
GAGGTCTGTGCATGATGCGGGATTTGTGTATGGGGATCTTAAGCCGGAGA
ACGTCGTAATTACGGAGTCGGGGCACGTGAAAGTGACGGATTTCGGGGCT
TGTCGACCGATTTCGCCTGAGGCCAAGGCGGTTTTGAAGGCGAGTCGGCA
TGCGATGCGGCAGTTGAGGGACGGCGATTGGCGACGAATGGCTGGTGAAG
GGAAAGGGGGAAATGGAGGTGGGCAGCAGCAGCAGCAACAGGAGCAGCAG
CAGGGGGGAGGAGGGAATGACGTTGAGTTTTTGAAGGGAGAGAGCGAAGA
GAAGGTGGCATCGATGATTATGGACGTGGAACGAGGTGGTGTAATGAAGG
CAGCGGAAAAGGAAAAGAAAGAGGAGGAGGAGGACGACGACGAGCGCATA
GAAGGTACCTTTGCTTTCTTGCCACCGGAAGTCATCCGTGAGGGTGCAGT
TCCTGACACGCTGGCTGATGCTTGGGCGTTGGGTTGTTTGCTCTACCAGT
GCTTCACTGGCAAACCTCCAGTCTTCAATGAGCACCAGCATGAGGGCGAC
GCAGATATCAAGGCGCGTGTAGTACGCTTCGCGGAGGAACGGCGCTCGAG
CAGCAATGCGCTTTTTGAGGAAAGTACCGGCAGCACCAGCAGCACCAGTA
GTAGTGCTGGCTTGGTCCTGAGTGAAGATGCCAAGAACTTGGTCAAGGAC
CTTTTGACGGTAGAGCGGAGCAAGCGCCTAACCCTCGAGGCCGCAGCCGT
GCATCCTTTCTTCACGGGCCAGGGCATCGACGTGTATGAACTGCACCGAA
ACCCGGCCATTCAGCTGGTCCAAGGAAGTGCCGGGCCGACGCCTGATGCA
GCTTGGAATCGACGTCAATTTTCAGCGATTTGGGCGCCACTTCCGGGGAA
CTACAATTTTGTATCACACTCATATGCCCTGCGACCCATTCCCGAGACGC
CGTTGGAGCGCGGAGCGCCTTTTTCGTTCGAAAATCGCAGGTTTCATGAG
GAGGATGGGTGGATGATGCCGTCGCCTGGGAATGGCAGGGGCCTACCTCT
TCCACCAAAGCCACCAGGGGAGGAGAAGAAAACATGA

Synonyms

Publications