NO04G01030.1, NO04G01030.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G01030.1
Unique Name	NO04G01030.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3599
Alignment location	chr4:330335..335004 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:330335..335004 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G01030.1 vs.
Match: EWM28448.1 (tapt1 protein [Nannochloropsis gaditana])

HSP 1 Score: 443.0 bits (1138), Expect = 2.600e-120
Identity = 241/295 (81.69%), Postives = 256/295 (86.78%), Query Frame = 0

Query:  741 MFEILDKLLVSFGQDTLDSLYYSVSVRETKKRHLTSNFLVATAYVLSHAVLLFVHVVTLFVAVNSADQALLTLLISNNFAEMKTSVFKRFDPKLLFQLTCSDMVERFKLLLFLVLITLLNLGQHAKEEGGGGVLYDMGKVCCLIFAGEIVADCIKHAFITKFNEIDAECYPKSAEELARVVTSHRRQTHVSLDRTHVICKKIGLAQLPLAAVAVRFSAIAWSFLHTFSWPAFISFTLLLVAVLLVSKILAGLCVTRWAWAIEARERGKREMRAREKEREREREA--GCMGMGGDA 1034
            MFE+LDKL+VSFGQDTLDSLYYSVS    +KRHLT+NFLVA AYVL+HAVLLFVHV+TLFVAVNSADQALLTLLISNNFAEMK+SVFKRFDPKLLFQLTCSDMVERFKLLLFL LITLLN GQHAKEEGG  V +DMGKVC LIF+GEIVADCIKHAFITKFNEIDA CY KSAEELAR VT HR Q+H  LDRTHVICKKIG AQLPLAAVAVRFS IAWSFL   SW A +SF LLL AVLL+SKI +GLC+TRWA  IE RE GKRE RARE+EREREREA  G  G GG A
Sbjct:    1 MFEVLDKLMVSFGQDTLDSLYYSVSAPAIRKRHLTTNFLVAVAYVLAHAVLLFVHVITLFVAVNSADQALLTLLISNNFAEMKSSVFKRFDPKLLFQLTCSDMVERFKLLLFLGLITLLNFGQHAKEEGGTAVFFDMGKVCGLIFSGEIVADCIKHAFITKFNEIDAGCYAKSAEELAREVTLHRLQSHRRLDRTHVICKKIGFAQLPLAAVAVRFSTIAWSFLPASSWQAALSFGLLLFAVLLLSKIASGLCLTRWAAGIEEREMGKREARAREREREREREALVGSRGGGGSA 295

The following BLAST results are available for this feature:

BLAST of NO04G01030.1 vs.

BLAST of NO04G01030.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28448.1	2.600e-120	81.69	tapt1 protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G01030	NO04G01030	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G01030.1	NO04G01030.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G01030.1.cds1	NO04G01030.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01030.1.cds2	NO04G01030.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01030.1.cds3	NO04G01030.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01030.1.cds4	NO04G01030.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01030.1.cds5	NO04G01030.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01030.1.cds6	NO04G01030.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01030.1.cds7	NO04G01030.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G01030.1.cds8	NO04G01030.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:330335..335004+
coding sequence from alignment at chr4:330335..335004+

mRNA sequence

>NO04G01030.1 ID=NO04G01030.1|Name=NO04G01030.1|organism=Nannochloropsis oceanica|type=mRNA|length=3599bp
ATGCCGGACGACCACCGGTCAGGACCCTCGTCCTCGTCTGCCTCATCTCC
CACACCACTTCCAAGCACTGCTCCCGCGGGAAGCAGCAGTATGACGGGCG
ACAGCGCAAGCAGCAGTAGCAGCAGTGTAAATAAGACCCCAAAGTCTCCA
TCTGTAACCCTGGCGCCGCCCTCCCCTCTTTGTGTCAAGCCGGGCCAGGA
GGAGGAGCCGCAGCAACCACCGCGCCAGCCTGCTCCTCATCAACCAAAAC
CGCACCAGCATGACCAGCGGGACGATCACTCCCTCCTTCTACACCATGAT
GACGGTCCCCTTGTTGCCCCTTCCTCCTCCCTCTCATCCTCCACGTCTTC
CACGTCCTCTCCTTCGGTCGCCACTGTACCTGTAGCATTGATGGAAAGGT
TGGTCAAGCGGATCGATTTGCTGGAGGCCGAAGTCACCAGCTGGCGGCAA
AAGGGACAAGAAGGAGGAAACAATCATAGGGCTGGCCAACGACGTAATCG
CCATCGTCAGCAGCAGCAGGCATCCTCTTCTCCCTCTGCCTGTCCCCGCC
CCATCACCACGGCGGACTCGCTGATGGAACTGCAATCTGCGGGGGTCCGG
GCGCGGAACGCGGGGAAGACCCACCCAGCTTGGCCGTTGCTGCAGAGCAT
AGACACCATTGATTTACCCGACAGTGCGCGGAACTCGCCGACACATAGCA
GCAGGAGCAGTAGCAGTAGCAGTAGTAGTAGTAGTAGCAGCAGCAGCAGC
AGTAGTAGTAGGCATCAGGAGACGAGTGGTGAAGAAGAGGAAGGGGGTGA
GGATGAGGAGGAAGAGGAGGAAGAGGAGGTGAAAGAAGAGGGAGAGAAGA
GGAAAAAGAGAGAGCGCATCGCTATTTCGGCGTCGGCTGCTGCATTGCAA
GCGGAGGAGGAGGAAGGGGGTGAGGAAGAGGAGGTGGTCTTGCCCTTGTC
CGAGGGTGAAGAGGGCGATGAGGCGGAGGACGAGGCACGAAAGGAAGAGG
GAAAGGAGGATGTGGAGGTGGAGGGAGGGAGGGAGGACGAGGACGAGGAC
AAGAGGCCCGTCCAAGCAGGAGTAATTGAGGAACGCAGCGAGCTCCGGCA
TAGAGGCAAGCAACCTCTTCCCTCCTCTTCCTCTTTCTCCTCCTCCACCT
CCTCCTCTTCCTCCTCGCCCTCACTCGTGCCCGCTGCTGTTGTTGTGGCG
ATGGGGGTGGGGGGTCAAGACACAACTAACAAGGGAGGGGCTGCCATCGA
GGAGCACGGCGGCGGCAGGAGTAGCAGTAGCAGCAGCAGCAGCAGCAGTC
TCCCGGGGAGCGGAGAGAAGAGAGATCTTCTCCGCCTCTTCAATGAACCA
TCTGTCACCTCTCCCACCTCCGCTGCCCCTCCTTCCTCTCTCACCTCGAA
CTCCTCCTCATCCTCTTCCACCACCGTCGCCGCCCCCTCCGCAAATGCTG
CTGCCTCCTCCACCTCCACTTCCACCTACATTACCACCTCCACCGCATGC
ACCAGCAGCAGCACAACCACGTCAGAAACCGGCGGAGCTCCCTCCCTAGC
CACAACCACAAGTGCCACACGCCGGAATCGGAGCAACAGCACCTGCAGCG
ATACCTCTCATCGGCGCCGACACCACCGCCATACCCATCACCACCATCAT
CACCTCACACACTCCTGCAAAGGCGGCGCAGCCCTTTCCTCCCCCCCCTC
CACGCCTACCCACGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTATCA
AATGCCTCCTCCCACCCTCCCACCCCCGCATCGCCCTCCTCTCCCTCCTC
CCCTCCCTCCCCCACTCCCTCCGATCCTTCCAAGCCTACGTCTGGCACGA
ACTTTTTGGGGCACAACAATACTACAGCGACGACAGGGATGCCACCGAGG
CCATTGCGAAAGCCGATAACATGGTGCAGAATTTTCTCCACGTCCCCTTT
CAGCTGGAGGAATGTCTGTCTTTCGGCCTGGCCGTGTGCATCGACGCCTT
TCTGTACGCGGTGACGGTGCTGCCCCTCCGGGTACTTTTTTCTTTGGGGG
CGTTGCTCCGACCCAGCCACCACCGCGTCTTCCACCGCCACAATGCGTAC
GATCTGATGCGGGGCCTGATCCTCCTCGTCACGTGCCTGGTACTGCAGTC
GTTCCAAATATCGAGAGTGTATCACTACATCCGGGGACAGGCCACGATCA
AGCTGTACGTCCTCACGGCCATGTTCGAGATACTGGACAAGCTCCTGGTC
TCCTTCGGCCAAGACACGCTGGACTCCCTCTACTACAGCGTCTCAGTGCG
CGAGACGAAAAAGAGGCACCTCACTTCCAATTTCCTGGTGGCAACGGCCT
ACGTCCTCTCGCACGCCGTCCTCCTCTTTGTCCACGTAGTGACCCTCTTT
GTGGCGGTGAACAGCGCGGATCAGGCCCTCCTGACCCTTCTGATTAGCAA
CAATTTCGCCGAGATGAAGACCAGTGTCTTCAAGCGGTTCGACCCCAAGC
TGCTCTTCCAGCTGACGTGCAGTGACATGGTGGAGCGCTTCAAGCTCCTC
CTCTTCCTCGTCCTCATCACCCTCCTCAACCTCGGGCAGCATGCCAAGGA
GGAAGGAGGGGGAGGTGTCCTCTACGACATGGGAAAGGTCTGCTGTCTCA
TATTCGCGGGCGAAATCGTGGCAGATTGTATCAAGCACGCCTTCATCACC
AAATTTAACGAGATCGACGCGGAATGTTACCCCAAGAGCGCCGAGGAGCT
CGCACGGGTCGTGACGTCACACAGGCGACAGACCCACGTGTCCCTGGACC
GCACGCACGTGATCTGCAAGAAGATCGGCCTCGCCCAGCTCCCCCTCGCT
GCAGTTGCCGTGCGCTTCTCGGCCATCGCCTGGTCCTTCCTTCACACCTT
CTCCTGGCCTGCCTTCATCTCGTTCACCCTCTTGCTGGTCGCGGTTTTGT
TAGTGAGCAAGATACTAGCCGGGCTGTGCGTGACCCGCTGGGCGTGGGCG
ATCGAAGCGAGGGAGAGGGGGAAGAGGGAAATGAGGGCGAGGGAGAAGGA
GAGGGAGAGAGAGAGGGAGGCGGGATGTATGGGGATGGGAGGAGATGCGG
GGGGCATATCCAAGTCTCACACTCCGATGAGGTGAGGGAGGGAGGGAAGA
AAGGTTGTTGGAGAGGAGTGATGCGAGCGTGTATTTATTTCTAGGGGCGT
AATTAGGCAGGATTGGAGGAAGGGATAAGATATGCATATAGAATAGAGAA
GCGACCAAGAAGAAGACGATTTGGAGGAAGGAGAAAAGGAAGGAGAGAGA
AGGAGAGGACTTAGCTGGTGTGGGGCTGTCATGTCATGCCTTCCCATGTC
ATCATATTTATACTCCACGGATGCCACGCACACAGACGCTCCTTATCTCT
CTCAATCCCCCCTCTCTCTCTCTCCGTGGCGATGTAATTAAAAGGTTTGA
AGGAGTAACGGGTAGGAGAAAGTGGAAGGGTACGAGTGGGGGATAATTAT
TTATATCGCGAGAGTAGAGAAGTGGGTCACGCCTTGAAGCGATCCACTCA
GCAAATCATCGGGAGGAAAAAGATAAGAAATTCTCCCTAATCTAGAAAA

protein sequence of NO04G01030.1

>NO04G01030.1-protein ID=NO04G01030.1-protein|Name=NO04G01030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1045bp
MPDDHRSGPSSSSASSPTPLPSTAPAGSSSMTGDSASSSSSSVNKTPKSP
SVTLAPPSPLCVKPGQEEEPQQPPRQPAPHQPKPHQHDQRDDHSLLLHHD
DGPLVAPSSSLSSSTSSTSSPSVATVPVALMERLVKRIDLLEAEVTSWRQ
KGQEGGNNHRAGQRRNRHRQQQQASSSPSACPRPITTADSLMELQSAGVR
ARNAGKTHPAWPLLQSIDTIDLPDSARNSPTHSSRSSSSSSSSSSSSSSS
SSSRHQETSGEEEEGGEDEEEEEEEEVKEEGEKRKKRERIAISASAAALQ
AEEEEGGEEEEVVLPLSEGEEGDEAEDEARKEEGKEDVEVEGGREDEDED
KRPVQAGVIEERSELRHRGKQPLPSSSSFSSSTSSSSSSPSLVPAAVVVA
MGVGGQDTTNKGGAAIEEHGGGRSSSSSSSSSSLPGSGEKRDLLRLFNEP
SVTSPTSAAPPSSLTSNSSSSSSTTVAAPSANAAASSTSTSTYITTSTAC
TSSSTTTSETGGAPSLATTTSATRRNRSNSTCSDTSHRRRHHRHTHHHHH
HLTHSCKGGAALSSPPSTPTHVSSSSSSSSSFIKCLLPPSHPRIALLSLL
PSLPHSLRSFQAYVWHELFGAQQYYSDDRDATEAIAKADNMVQNFLHVPF
QLEECLSFGLAVCIDAFLYAVTVLPLRVLFSLGALLRPSHHRVFHRHNAY
DLMRGLILLVTCLVLQSFQISRVYHYIRGQATIKLYVLTAMFEILDKLLV
SFGQDTLDSLYYSVSVRETKKRHLTSNFLVATAYVLSHAVLLFVHVVTLF
VAVNSADQALLTLLISNNFAEMKTSVFKRFDPKLLFQLTCSDMVERFKLL
LFLVLITLLNLGQHAKEEGGGGVLYDMGKVCCLIFAGEIVADCIKHAFIT
KFNEIDAECYPKSAEELARVVTSHRRQTHVSLDRTHVICKKIGLAQLPLA
AVAVRFSAIAWSFLHTFSWPAFISFTLLLVAVLLVSKILAGLCVTRWAWA
IEARERGKREMRAREKEREREREAGCMGMGGDAGGISKSHTPMR*

mRNA from alignment at chr4:330335..335004+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G01030.1 ID=NO04G01030.1|Name=NO04G01030.1|organism=Nannochloropsis oceanica|type=mRNA|length=4670bp|location=Sequence derived from alignment at chr4:330335..335004+ (Nannochloropsis oceanica)
ATGCCGGACGACCACCGGTCAGGACCCTCGTCCTCGTCTGCCTCATCTCC
CACACCACTTCCAAGCACTGCTCCCGCGGGAAGCAGCAGTATGACGGGCG
ACAGCGCAAGCAGCAGTAGCAGCAGTGTAAATAAGACCCCAAAGTCTCCA
TCTGTAACCCTGGCGCCGCCCTCCCCTCTTTGTGTCAAGCCGGGCCAGGA
GGAGGAGCCGCAGCAACCACCGCGCCAGCCTGCTCCTCATCAACCAAAAC
CGCACCAGCATGACCAGCGGGACGATCACTCCCTCCTTCTACACCATGAT
GACGGTCCCCTTGTTGCCCCTTCCTCCTCCCTCTCATCCTCCACGTCTTC
CACGTCCTCTCCTTCGGTCGCCACTGTACCTGTAGCATTGATGGAAAGGT
TGGTCAAGCGGATCGATTTGCTGGAGGCCGAAGTCACCAGCTGGCGGCAA
AAGGGACAAGAAGGAGGAAACAATCATAGGGCTGGCCAACGACGTAATCG
CCATCGTCAGCAGCAGCAGGCATCCTCTTCTCCCTCTGCCTGTCCCCGCC
CCATCACCACGGCGGACTCGCTGATGGAACTGCAATCTGCGGGGGTCCGG
GCGCGGAACGCGGGGAAGACCCACCCAGCTTGGCCGTTGCTGCAGAGCAT
AGACACCATTGATTTACCCGACAGTGCGCGGAACTCGCCGACACATAGCA
GCAGGAGCAGTAGCAGTAGCAGTAGTAGTAGTAGTAGCAGCAGCAGCAGC
AGTAGTAGTAGGCATCAGGAGACGAGTGGTGAAGAAGAGGAAGGGGGTGA
GGATGAGGAGGAAGAGGAGGAAGAGGAGGTGAAAGAAGAGGGAGAGAAGA
GGAAAAAGAGAGAGCGCATCGCTATTTCGGCGTCGGCTGCTGCATTGCAA
GCGGAGGAGGAGGAAGGGGGTGAGGAAGAGGAGGTGGTCTTGCCCTTGTC
CGAGGGTGAAGAGGGCGATGAGGCGGAGGACGAGGCACGAAAGGAAGAGG
GAAAGGAGGATGTGGAGGTGGAGGGAGGGAGGGAGGACGAGGACGAGGAC
AAGAGGCCCGTCCAAGCAGGAGTAATTGAGGAACGCAGCGAGCTCCGGCA
TAGAGGCAAGCAACCTCTTCCCTCCTCTTCCTCTTTCTCCTCCTCCACCT
CCTCCTCTTCCTCCTCGCCCTCACTCGTGCCCGCTGCTGTTGTTGTGGCG
ATGGGGGTGGGGGGTCAAGACACAACTAACAAGGGAGGGGCTGCCATCGA
GGAGCACGGCGGCGGCAGGAGTAGCAGTAGCAGCAGCAGCAGCAGCAGTC
TCCCGGGGAGCGGAGAGAAGAGAGATCTTCTCCGCCTCTTCAATGAACCA
TCTGTCACCTCTCCCACCTCCGCTGCCCCTCCTTCCTCTCTCACCTCGAA
CTCCTCCTCATCCTCTTCCACCACCGTCGCCGCCCCCTCCGCAAATGCTG
CTGCCTCCTCCACCTCCACTTCCACCTACATTACCACCTCCACCGCATGC
ACCAGCAGCAGCACAACCACGTCAGAAACCGGCGGAGCTCCCTCCCTAGC
CACAACCACAAGTGCCACACGCCGGAATCGGAGCAACAGCACCTGCAGCG
ATACCTCTCATCGGCGCCGACACCACCGCCATACCCATCACCACCATCAT
CACCTCACACACTCCTGCAAAGGCGGCGCAGCCCTTTCCTCCCCCCCCTC
CACGCCTACCCACGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTATCA
AATGCCTCCTCCCACCCTCCCACCCCCGCATCGCCCTCCTCTCCCTCCTC
CCCTCCCTCCCCCACTCCCTCCGATCCTTCCAAGCCTACGTCTGGCACGA
ACTTTTTGGGGCACAACAATACTACAGCGACGACAGGGATGCCACCGAGG
CCATTGCGAAAGCCGATAACATGGTGCAGAATTTTCTCCACGTCCCCTTT
CAGCTGGAGGAATGTCTGTCTTTCGGCCTGGCCGTGTGCATCGACGCCTT
TCTGTACGCGGTGACGGTGCTGCCCCTCCGGGTACTTTTTTCTTTGGGGG
CGTTGCTCCGACCCAGGTGAGGCAGGACGAGGGAGTGAGAGAGGAAGGGA
GGGAAGGTGCAAGGAGTGCGTGAGTGTTGTGGTAGGAGCTTCTTTTCTTC
TCACCTTTTGACAAGATCGTCCCTTCCTCCCCTCTCTCCCTCCCTCCCTC
CCTCCCTCCCTCCGTCCCTCCAGCCACCACCGCGTCTTCCACCGCCACAA
TGCGTACGATCTGATGCGGGGCCTGATCCTCCTCGTCACGTGCCTGGTAC
TGCAGTCGTTCCAAATATCGAGAGTGTATCACTACATCCGGGGACAGGTA
GGGAGGGAGGGAGGGAGGGAGGGAGGGTGGGGAGGAGGGGGGAGAAGAAG
AAATAGAGAGTCAAGGCAACGAGGATGGATGCCCATTCGAGCTCCTCATT
GGTGATCGTTATCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTC
TCCCGCAGGCCACGATCAAGCTGTACGTCCTCACGGCCATGTTCGAGATA
CTGGACAAGCTCCTGGTCTCCTTCGGCCAAGACACGCTGGACTCCCTCTA
CTACAGCGTCTCAGTGCGCGAGACGAAAAAGAGGTACCTCCCTCCCTCCC
TCCCTCCCTACCGTGGAGTGCTCTGTCCTATCTCTTTCCCCTATTCCGTT
CAATTTTGCGAATCCCCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCC
CTCAGGCACCTCACTTCCAATTTCCTGGTGGCAACGGCCTACGTCCTCTC
GCACGCCGTCCTCCTCTTTGTCCACGTAGTGACCCTCTTTGTGGCGGTGA
ACAGCGCGGATCAGGCCCTCCTGACCCTTCTGATTAGCAACAATTTCGCC
GAGATGAAGACCAGTGTCTTCAAGCGGTACGGACGGAGGGAAGGAGGGAA
GGAGGGAGGGAAGGCTTTGGTTGTTGGGGACACCCATAAGACAGAATGAA
AACAGCGGTGGTCAGCACCTTCACCTCCCTCCCTCCCTCCTTCCCTCCTT
CCAGGTTCGACCCCAAGCTGCTCTTCCAGCTGACGTGCAGTGACATGGTG
GAGCGCTTCAAGCTCCTCCTCTTCCTCGTCCTCATCACCCTCCTCAACCT
CGGGCAGCATGCCAAGGAGGAAGGAGGGGGAGGTGTCCTCTACGGTGCGC
GGGGAGGGAGGGAGGGAAGGAGGGCGAGGGAAGAGGAAAGAGATCGTCTC
TGCCATGGAGGGAGGGAGGGAAAGAAGGCAAGGAAGAGGAAGAAGTTACG
GCGTCATGCTCAAAATTACGGCGTCATGCTCAAAATTACGGCGTCATGCT
CACTCTCTCTATTTCTGCTTCCGTTTTCTCCTCCCATCTTCATTGGTTTG
TAGACATGGGAAAGGTCTGCTGTCTCATATTCGCGGGCGAAATCGTGGCA
GATTGTATCAAGGTGAGCACTGCCTCCAAACCTCCCTCCCCTCCTCCCTT
CCTCCTTCACTGCGTGTTTGCCCACTGGTCCCCCCATCAAGATGTTAGAG
TGCGACTACCTTGATTAAGACACCCTTACGTCCTTGTTGCCCCTTCCCCC
TTCCTTCCTTCCTCCCTCCAGCACGCCTTCATCACCAAATTTAACGAGAT
CGACGCGGAATGTTACCCCAAGAGCGCCGAGGAGCTCGCACGGGTCGTGA
CGTCACACAGGCGACAGACCCACGTGTCCCTGGACCGCACGCACGTGATC
TGCAAGAAGGTAGGGAGGGAGAGATGGCAAGATGTGTAGATGTGATTGAG
CTTTTTAATTGCCTTCTCCTTCTTCGTTGCAGACGCGACTATCAACATCG
AGCTCACGGTCTTTCCTTTCCCCTCCTTCCCTCCCTCCCTCCAGATCGGC
CTCGCCCAGCTCCCCCTCGCTGCAGTTGCCGTGCGCTTCTCGGCCATCGC
CTGGTCCTTCCTTCACACCTTCTCCTGGCCTGCCTTCATCTCGTTCACCC
TCTTGCTGGTCGCGGTTTTGTTAGTGAGCAAGATACTAGCCGGGCTGTGC
GTGACCCGCTGGGCGTGGGCGATCGAAGCGAGGGAGAGGGGGAAGAGGGA
AATGAGGGCGAGGGAGAAGGAGAGGGAGAGAGAGAGGGAGGCGGGATGTA
TGGGGATGGGAGGAGATGCGGGGGGCATATCCAAGTCTCACACTCCGATG
AGGTGAGGGAGGGAGGGAAGAAAGGTTGTTGGAGAGGAGTGATGCGAGCG
TGTATTTATTTCTAGGGGCGTAATTAGGCAGGATTGGAGGAAGGGATAAG
ATATGCATATAGAATAGAGAAGCGACCAAGAAGAAGACGATTTGGAGGAA
GGAGAAAAGGAAGGAGAGAGAAGGAGAGGACTTAGCTGGTGTGGGGCTGT
CATGTCATGCCTTCCCATGTCATCATATTTATACTCCACGGATGCCACGC
ACACAGACGCTCCTTATCTCTCTCAATCCCCCCTCTCTCTCTCTCCGTGG
CGATGTAATTAAAAGGTTTGAAGGAGTAACGGGTAGGAGAAAGTGGAAGG
GTACGAGTGGGGGATAATTATTTATATCGCGAGAGTAGAGAAGTGGGTCA
CGCCTTGAAGCGATCCACTCAGCAAATCATCGGGAGGAAAAAGATAAGAA
ATTCTCCCTAATCTAGAAAA

Coding sequence (CDS) from alignment at chr4:330335..335004+

>NO04G01030.1 ID=NO04G01030.1|Name=NO04G01030.1|organism=Nannochloropsis oceanica|type=CDS|length=3135bp|location=Sequence derived from alignment at chr4:330335..335004+ (Nannochloropsis oceanica)
ATGCCGGACGACCACCGGTCAGGACCCTCGTCCTCGTCTGCCTCATCTCC
CACACCACTTCCAAGCACTGCTCCCGCGGGAAGCAGCAGTATGACGGGCG
ACAGCGCAAGCAGCAGTAGCAGCAGTGTAAATAAGACCCCAAAGTCTCCA
TCTGTAACCCTGGCGCCGCCCTCCCCTCTTTGTGTCAAGCCGGGCCAGGA
GGAGGAGCCGCAGCAACCACCGCGCCAGCCTGCTCCTCATCAACCAAAAC
CGCACCAGCATGACCAGCGGGACGATCACTCCCTCCTTCTACACCATGAT
GACGGTCCCCTTGTTGCCCCTTCCTCCTCCCTCTCATCCTCCACGTCTTC
CACGTCCTCTCCTTCGGTCGCCACTGTACCTGTAGCATTGATGGAAAGGT
TGGTCAAGCGGATCGATTTGCTGGAGGCCGAAGTCACCAGCTGGCGGCAA
AAGGGACAAGAAGGAGGAAACAATCATAGGGCTGGCCAACGACGTAATCG
CCATCGTCAGCAGCAGCAGGCATCCTCTTCTCCCTCTGCCTGTCCCCGCC
CCATCACCACGGCGGACTCGCTGATGGAACTGCAATCTGCGGGGGTCCGG
GCGCGGAACGCGGGGAAGACCCACCCAGCTTGGCCGTTGCTGCAGAGCAT
AGACACCATTGATTTACCCGACAGTGCGCGGAACTCGCCGACACATAGCA
GCAGGAGCAGTAGCAGTAGCAGTAGTAGTAGTAGTAGCAGCAGCAGCAGC
AGTAGTAGTAGGCATCAGGAGACGAGTGGTGAAGAAGAGGAAGGGGGTGA
GGATGAGGAGGAAGAGGAGGAAGAGGAGGTGAAAGAAGAGGGAGAGAAGA
GGAAAAAGAGAGAGCGCATCGCTATTTCGGCGTCGGCTGCTGCATTGCAA
GCGGAGGAGGAGGAAGGGGGTGAGGAAGAGGAGGTGGTCTTGCCCTTGTC
CGAGGGTGAAGAGGGCGATGAGGCGGAGGACGAGGCACGAAAGGAAGAGG
GAAAGGAGGATGTGGAGGTGGAGGGAGGGAGGGAGGACGAGGACGAGGAC
AAGAGGCCCGTCCAAGCAGGAGTAATTGAGGAACGCAGCGAGCTCCGGCA
TAGAGGCAAGCAACCTCTTCCCTCCTCTTCCTCTTTCTCCTCCTCCACCT
CCTCCTCTTCCTCCTCGCCCTCACTCGTGCCCGCTGCTGTTGTTGTGGCG
ATGGGGGTGGGGGGTCAAGACACAACTAACAAGGGAGGGGCTGCCATCGA
GGAGCACGGCGGCGGCAGGAGTAGCAGTAGCAGCAGCAGCAGCAGCAGTC
TCCCGGGGAGCGGAGAGAAGAGAGATCTTCTCCGCCTCTTCAATGAACCA
TCTGTCACCTCTCCCACCTCCGCTGCCCCTCCTTCCTCTCTCACCTCGAA
CTCCTCCTCATCCTCTTCCACCACCGTCGCCGCCCCCTCCGCAAATGCTG
CTGCCTCCTCCACCTCCACTTCCACCTACATTACCACCTCCACCGCATGC
ACCAGCAGCAGCACAACCACGTCAGAAACCGGCGGAGCTCCCTCCCTAGC
CACAACCACAAGTGCCACACGCCGGAATCGGAGCAACAGCACCTGCAGCG
ATACCTCTCATCGGCGCCGACACCACCGCCATACCCATCACCACCATCAT
CACCTCACACACTCCTGCAAAGGCGGCGCAGCCCTTTCCTCCCCCCCCTC
CACGCCTACCCACGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTATCA
AATGCCTCCTCCCACCCTCCCACCCCCGCATCGCCCTCCTCTCCCTCCTC
CCCTCCCTCCCCCACTCCCTCCGATCCTTCCAAGCCTACGTCTGGCACGA
ACTTTTTGGGGCACAACAATACTACAGCGACGACAGGGATGCCACCGAGG
CCATTGCGAAAGCCGATAACATGGTGCAGAATTTTCTCCACGTCCCCTTT
CAGCTGGAGGAATGTCTGTCTTTCGGCCTGGCCGTGTGCATCGACGCCTT
TCTGTACGCGGTGACGGTGCTGCCCCTCCGGGTACTTTTTTCTTTGGGGG
CGTTGCTCCGACCCAGCCACCACCGCGTCTTCCACCGCCACAATGCGTAC
GATCTGATGCGGGGCCTGATCCTCCTCGTCACGTGCCTGGTACTGCAGTC
GTTCCAAATATCGAGAGTGTATCACTACATCCGGGGACAGGCCACGATCA
AGCTGTACGTCCTCACGGCCATGTTCGAGATACTGGACAAGCTCCTGGTC
TCCTTCGGCCAAGACACGCTGGACTCCCTCTACTACAGCGTCTCAGTGCG
CGAGACGAAAAAGAGGCACCTCACTTCCAATTTCCTGGTGGCAACGGCCT
ACGTCCTCTCGCACGCCGTCCTCCTCTTTGTCCACGTAGTGACCCTCTTT
GTGGCGGTGAACAGCGCGGATCAGGCCCTCCTGACCCTTCTGATTAGCAA
CAATTTCGCCGAGATGAAGACCAGTGTCTTCAAGCGGTTCGACCCCAAGC
TGCTCTTCCAGCTGACGTGCAGTGACATGGTGGAGCGCTTCAAGCTCCTC
CTCTTCCTCGTCCTCATCACCCTCCTCAACCTCGGGCAGCATGCCAAGGA
GGAAGGAGGGGGAGGTGTCCTCTACGACATGGGAAAGGTCTGCTGTCTCA
TATTCGCGGGCGAAATCGTGGCAGATTGTATCAAGCACGCCTTCATCACC
AAATTTAACGAGATCGACGCGGAATGTTACCCCAAGAGCGCCGAGGAGCT
CGCACGGGTCGTGACGTCACACAGGCGACAGACCCACGTGTCCCTGGACC
GCACGCACGTGATCTGCAAGAAGATCGGCCTCGCCCAGCTCCCCCTCGCT
GCAGTTGCCGTGCGCTTCTCGGCCATCGCCTGGTCCTTCCTTCACACCTT
CTCCTGGCCTGCCTTCATCTCGTTCACCCTCTTGCTGGTCGCGGTTTTGT
TAGTGAGCAAGATACTAGCCGGGCTGTGCGTGACCCGCTGGGCGTGGGCG
ATCGAAGCGAGGGAGAGGGGGAAGAGGGAAATGAGGGCGAGGGAGAAGGA
GAGGGAGAGAGAGAGGGAGGCGGGATGTATGGGGATGGGAGGAGATGCGG
GGGGCATATCCAAGTCTCACACTCCGATGAGGTGA

Synonyms

Publications