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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr4 | genome | chr4:311795..315572 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G00970.1 ID=NO04G00970.1|Name=NO04G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=3234bp AGTTCGTTAGTTTTGATCACACCGACACAATGGTTCGTCAGTCGAGGTCT CGGTGTTCGGAGTGAAAAAGAGAAAAGCCAACGCTCTGGGCACGTACTCG AGCACGCTCGACGGTGGCTGGCTTGAGTACAGCACAGAGAGAACTCTCCT CTTCTCAGATGGCTTGGTTACCTCGGAGGGAGGCCGGAGGCCGTGGTCGC GTGGGTAGCCGCGGCGCGCCGATAACCTCCCAACGGATCGACGAGGATGC TTTTACTTGCATCATCGTTTTCAATCACGCCACTATAAACACACTCAGGA ATTCTTACCCCACAGCTATTTTGCGCTGTATCTACAGCATCTTGGTTGCC TCCGCTACCTCTTTGGGTCGCTCCCTCGACGCATTTGGCTCCGCAAAAAC GAATTCTCTTCACCCCACCTTCTTTCCCAACTCGTACGACACACCAAGCT TTATCACCCGAAGCATTATGGCGGGCAGTCCAGAAGACGCCCGTCGTGCA ATGGAACTCACATTCAAGGCCCATTTTTCGGATTTGGTTGCAGCCGGAGT ACCTCGCAATGTCGCCGCTGCCCGAGCACTGCAGGCGACCCAGCAAGAGG CGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGGAGG AGGAGGAGGAGGAGAAGGACTTGGGACGACACGGATGGAGGAAGAAGAGA TGCAAGTGGAGGAGATGGGTACGTCCTCATCTTATTCCTCTATTTCTACA TCGGAAGCAGCCGTAGCGATGAGGGAGGAGGGGGAGGAGGGACGGAAGGA GGGGAAGGGAACGGGAGTGGATGGTGAGGAGGTGAAGGAGGAAGAAGATG GAGAAGATTCGAGCGACGACAATGAGGAGGAGGACGGGGAGGATGGCATG AGTGTCGATGGCGAGAAGGAGGAAGAGGAGGAGGATGGGGGGGACAACAA AGAGTGTCTGTCGGTAGAGACGTTGAAGAGTCTCGTGGAAGTGGCGCAGG AATCAGGGGACTACACGGAGTTAAAGGCCTTCTTGACGTCTGGATTTTCG CATTCCAAGATCTTGAACGCGAGCTTCATCCCTCGTAAGAAAGTGGGGGT GTCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGATGGCGGAAGGAAAGA AGGGGGAAGGGGAAGAGAGTATGGAGATGGACGATGAGGCCATGCCACTA CCACCCACCTTGTCTTCCGAGGAGGGAGGGAGGGAGGAAGGAAGAGGGGG CCCGCCGTTGGCAATTACGTTGGACCATGAGGCGGTGGTGCAGTTTTACA CTGCACTGGTGGGGGCGGACGAAGTCTACCGTCAGCGAGGACGGAAGAAG GAGGGGCAGAAGGAGGAAGGGAACGAGGAAGAGGAGGAGGAAGGATTGAT GGACGTGGTTCGCAATGCGCAGGCGAAGCTGGCGGCGCAATTGCATGCTG AGGCTACTGCTACTGCTGCTGCTACTTCCTCCTCGTCGTCAGGGAGGGGT GGTGAAGGAGAAGGGAACAAGGGGAAACATGTTCGTGCCACAGCTAAGAA ACGTCCGCGCAAGGAGGAGGAGGTGGGAGGAGGAGCGGGTGCAGCTTCTG CCCTTTCCTCCTCCTCCTCATCCCTCCCTCCTCCCACCGATACCTCCCTT CCCCCCCCTCCCCCCCAAACTCGAAAGAAACGGTTGGCCGCCAAACGGGC CAGGGCAGCCCGTCGAGCGCACCTCGCCCTCCCTCGGTCCCTCCGTCAGT ACGTCCTTCTCCTTGAATCCCCCGAGAGCTGCGACCCTTCCTGGCAACGC TACGTGGCCCCCTCCCTCTTCGCGGCCATCGTCCTCCTTCCCTCCCTCGC GAAGGACCTGCTCAAGGAGTGGATGGCGGGGGGAGAGAGGGGGGGAGGGA GGGAGGGAAGAGGGGCAATAACGCGGCTGGGCAGGTGGGTGGCGGCCCTG CAGCAATACATAACCATCCGGTGCCTGGAGGAGCAATCTCCCCGGGCCTA CGCGGACGTGAAGACTGCTGTCAGGGTCATGGCCATACTGTACAAGGCGA ACCAACTGAGGGAGGGAGGCATGGAGGGGGGGGTCGTGCCGTTGGCTGAT TTCTACAATGGAGCCGTTAACGAGGCCTTGGAACGCACCCGCGATGAGGA CGAGGACGAAGAGAAGGACGAGGAGGAGGAGGACGAGGAGGCGGCACGCA TCGTGCGAATCCAACGTCGGCGATTTTTCCACATTGGCCTTGAGTTTGAG ACATGGCGCCAAGACAGAGAGCGGCTTCGACGGCGGGGGAGGGAGGGAGG GAGGGAAGGGGCATTCGAACCCCGGACTATTGTCTTTTATCCGTTTTTGT TGACGCCGGCGGTGAAAGCGCGGTTGCTGCACTTCGACTGCGTGGAGCAG ATGCGGAGGTGGGGAAGGAAGAAAGGAAGGGAGGGAACGGGCGAGGCGAA GGAGGAAGTGGGTGTGAGGTGTTTGTGTGTTTGCTCGTCTCTCCGTCCCT CCATACATTCCCCCTCCCTCAATTCAAAATGCTCAGGGCGGATGAAGGAG ATAAATAACACGCACGCGTCACGGGACAATATTAACACCACCATTTTACA CTAGCACCACTATACATGATCATCACCATTATATACTAACACCATTGATC ATAGAAAGCTCATAACCAGAAACTTTCCTTCCTTTCCTCTCTTCCTCCCT CGCCGCTCCCTCGCCCTCACAGAGAGATCGAAGAGGAGATGGATTACGCG ATGGCCGGCGGGGTCATTCGCCCTTACCTCGTGCTCAAGGTGGAGAGGAA TGACATCGTGGGCTCCACGTTGCATGCCCTGGCTCTGTACGAGGGATTCG AGTACAAGAAGAAGCTCAAGGTCCAATTTCGCGGGGAGGACGGCGTGGAC GAGGGAGGGGTGCAGAAAGAATTTTTCCAAGTCCTCCTCCGGCAACTCCT CGATCCTGCCTATGGAATGTTCCTCCCCGAGCCCCTAGGCCCAAATCAAC CAGGCGATGTAGGCGATGCCCGCCTCCTCTGGTTCAACCCTGATTCCTTC AATGACCCGCGTGAGTTTGAGCTCGTCGGCATATTGCTCGGCCTTGCCCT CTACAACGCCGTCCTCCTCGATCTCCACTTCCCCCCCATTCTCTACAAAA AACTTATGCTACCGCCCTCCAGCCCCTCCTCTTC back to topprotein sequence of NO04G00970.1 >NO04G00970.1-protein ID=NO04G00970.1-protein|Name=NO04G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=832bp MAWLPRREAGGRGRVGSRGAPITSQRIDEDAFTCIIVFNHATINTLRNSY PTAILRCIYSILVASATSLGRSLDAFGSAKTNSLHPTFFPNSYDTPSFIT RSIMAGSPEDARRAMELTFKAHFSDLVAAGVPRNVAAARALQATQQEAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAARGGGGGGEGLGTTRMEEEEMQV EEMGTSSSYSSISTSEAAVAMREEGEEGRKEGKGTGVDGEEVKEEEDGED SSDDNEEEDGEDGMSVDGEKEEEEEDGGDNKECLSVETLKSLVEVAQESG DYTELKAFLTSGFSHSKILNASFIPRKKVGVSGGGGGGGGGEMAEGKKGE GEESMEMDDEAMPLPPTLSSEEGGREEGRGGPPLAITLDHEAVVQFYTAL VGADEVYRQRGRKKEGQKEEGNEEEEEEGLMDVVRNAQAKLAAQLHAEAT ATAAATSSSSSGRGGEGEGNKGKHVRATAKKRPRKEEEVGGGAGAASALS SSSSSLPPPTDTSLPPPPPQTRKKRLAAKRARAARRAHLALPRSLRQYVL LLESPESCDPSWQRYVAPSLFAAIVLLPSLAKDLLKEWMAGGERGGGREG RGAITRLGRWVAALQQYITIRCLEEQSPRAYADVKTAVRVMAILYKANQL REGGMEGGVVPLADFYNGAVNEALERTRDEDEDEEKDEEEEDEEAARIVR IQRRRFFHIGLEFETWRQDRERLRRRGREGGREGAFEPRTIVFYPFLLTP AVKARLLHFDCVEQMRRWGRKKGREGTGEAKEEVGVRCLCVCSSLRPSIH SPSLNSKCSGRMKEINNTHASRDNINTTILH* back to topmRNA from alignment at chr4:311795..315572- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G00970.1 ID=NO04G00970.1|Name=NO04G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=3778bp|location=Sequence derived from alignment at chr4:311795..315572- (Nannochloropsis oceanica) AGTTCGTTAGTTTTGATCACACCGACACAATGGTTCGTCAGTCGAGGTCT
CGGTGTTCGGAGTGAAAAAGAGAAAAGCCAACGCTCTGGGCACGTACTCG
AGCACGCTCGACGGTGGCTGGCTTGAGTACAGCACAGAGAGAACTCTCCT
CTTCTCAGATGGCTTGGTTACCTCGGAGGGAGGCCGGAGGCCGTGGTCGC
GTGGGTAGCCGCGGCGCGCCGATAACCTCCCAACGGATCGACGAGGATGC
TTTTACTTGCATCATCGTTTTCAATCACGCCACTATAAACACACTCAGGA
ATTCTTACCCCACAGCTATTTTGCGCTGTATCTACAGCATCTTGGTTGCC
TCCGCTACCTCTTTGGGTCGCTCCCTCGACGCATTTGGCTCCGCAAAAAC
GAATTCTCTTCACCCCACCTTCTTTCCCAACTCGTACGACACACCAAGCT
TTATCACCCGAAGCATTATGGCGGGCAGTCCAGAAGACGCCCGTCGTGCA
ATGGAACTCACATTCAAGGCCCATTTTTCGGATTTGGTTGCAGCCGGAGT
ACCTCGCAATGTCGCCGCTGCCCGAGCACTGCAGGCGACCCAGCAAGAGG
CGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGGAGG
AGGAGGAGGAGGAGAAGGACTTGGGACGACACGGATGGAGGAAGAAGAGA
TGCAAGTGGAGGAGATGGGTACGTCCTCATCTTATTCCTCTATTTCTACA
TCGGAAGCAGCCGTAGCGATGAGGGAGGAGGGGGAGGAGGGACGGAAGGA
GGGGAAGGGAACGGGAGTGGATGGTGAGGAGGTGAAGGAGGAAGAAGATG
GAGAAGATTCGAGCGACGACAATGAGGAGGAGGACGGGGAGGATGGCATG
AGTGTCGATGGCGAGAAGGAGGAAGAGGAGGAGGATGGGGGGGACAACAA
AGAGTGTCTGTCGGTAGAGACGTTGAAGAGTCTCGTGGAAGTGGCGCAGG
AATCAGGGGACTACACGGAGTTAAAGGCCTTCTTGACGTCTGGATTTTCG
CATTCCAAGATCTTGAACGCGAGCTTCATCCCTCGTAAGAAAGTGGGGGT
GTCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGATGGCGGAAGGAAAGA
AGGGGGAAGGGGAAGAGAGTATGGAGATGGACGATGAGGCCATGCCACTA
CCACCCACCTTGTCTTCCGAGGAGGGAGGGAGGGAGGAAGGAAGAGGGGG
CCCGCCGTTGGCAATTACGTTGGACCATGAGGCGGTGGTGCAGTTTTACA
CTGCACTGGTGGGGGCGGACGAAGTCTACCGTCAGCGAGGACGGAAGAAG
GAGGGGCAGAAGGAGGAAGGGAACGAGGAAGAGGAGGAGGAAGGATTGAT
GGACGTGGTTCGCAATGCGCAGGCGAAGCTGGCGGCGCAATTGCATGCTG
AGGCTACTGCTACTGCTGCTGCTACTTCCTCCTCGTCGTCAGGGAGGGGT
GGTGAAGGAGAAGGGAACAAGGGGAAACATGTTCGTGCCACAGCTAAGAA
ACGTCCGCGCAAGGAGGAGGAGGTGGGAGGAGGAGCGGGTGCAGCTTCTG
CCCTTTCCTCCTCCTCCTCATCCCTCCCTCCTCCCACCGATACCTCCCTT
CCCCCCCCTCCCCCCCAAACTCGAAAGAAACGGTTGGCCGCCAAACGGGC
CAGGGCAGCCCGTCGAGCGCACCTCGCCCTCCCTCGGTCCCTCCGTCAGT
ACGTCCTTCTCCTTGAATCCCCCGAGAGCTGCGACCCTTCCTGGCAACGC
TACGTGGCCCCCTCCCTCTTCGCGGCCATCGTCCTCCTTCCCTCCCTCGC
GAAGGACCTGCTCAAGGAGTGGATGGCGGGGGGAGAGAGGGGGGGAGGGA
GGGAGGGAAGAGGGGCAATAACGCGGCTGGGCAGGTGGGTGGCGGCCCTG
CAGCAATACATAACCATCCGGTGCCTGGAGGAGCAATCTCCCCGGGCCTA
CGCGGACGTGAAGACTGCTGTCAGGGTCATGGCCATACTGTACAAGGCGA
ACCAACTGAGGGAGGGAGGCATGGAGGGGGGGGTCGTGCCGTTGGCTGAT
TTCTACAATGGAGGTGCGTGATGGTGTGGAGAGGACCAGGGGGGGATAGA
GAGGGGGCGGTAGGGGGGAGAGGTGCTGGGTATCCAACAGAGAGCTGAGT
GAGAGAGAGAGTCACCATATTCATTTATCTGTCCCCCCGATCTGTCTCCC
TCCCGCCCTTGCGCCCTCCCTGCGACCACAGCCGTTAACGAGGCCTTGGA
ACGCACCCGCGATGAGGACGAGGACGAAGAGAAGGACGAGGAGGAGGAGG
ACGAGGAGGCGGCACGCATCGTGCGAATCCAACGTCGGCGATTTTTCCAC
ATTGGCCTTGAGTTTGAGACATGGCGCCAAGACAGAGAGCGGCTTCGACG
GCGGGGGAGGGAGGGAGGGAGGGAAGGGGCATTCGAACCCCGGACTATTG
TCTTTTATCCGTTTTTGTTGACGCCGGCGGTGAAAGCGCGGTTGCTGCAC
TTCGACTGCGTGGAGCAGATGCGGAGGTGGGGAAGGAAGAAAGGAAGGGA
GGGAACGGGCGAGGCGAAGGAGGAAGTGGGTGTGAGGTGTTTGTGTGTTT
GCTCGTCTCTCCGTCCCTCCATACATTCCCCCTCCCTCAATTCAAAATGC
TCAGGGCGGATGAAGGAGATAAATAACACGCACGCGTCACGGGACAATAT
TAACACCACCATTTTACACTAGCACCACTATACATGATCATCACCATTAT
ATACTAACACCATTGATCATAGAAAGCTCATAACCAGAAACTTTCCTTCC
TTTCCTCTCTTCCTCCCTCGCCGCTCCCTCGCCCTCACAGAGAGATCGAA
GAGGAGATGGATTACGCGATGGCCGGCGGGGTCATTCGCCCTTACCTCGT
GCTCAAGGTGGAGAGGAATGACATCGTGGGCTCCACGTTGCATGCCCTGG
CTCTGTACGAGGGATTCGAGTACAAGAAGAAGCTCAAGGTCCAATTTCGC
GGGGAGGACGGCGTGGACGAGGGAGGGGTGCAGAAAGGTAAGGGAGGCAG
GGAGGGTATATACATGTATACTTGTAAATGTATATATATGTGTATCTTTG
TGTGGGTGTGTGGGAATGGGTATATGTATACATATAAATGTGTAAATATG
CATATCTGTGTGTGGGTGGGAATGTGTGGGGGGGGGAGGAGCAGAACTGT
GCCTCTCCCCCCTTCCATACCCCCTCCAGGACCCTCCTCCCGTACGCACG
CTTTCCCCGGGTCACATATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCTCAGAATTTTTCCAAGTCCTCCTCCGGCAACTCCTCGATCCTGCCTA
TGGAATGTTCCTCCCCGAGCCCCTAGGCCCAAATCAACCAGGCGATGTAG
GCGATGGTACGTCCCTCCCATCTTTCCTCCCTCCTTTCCTCGCGCCCCTT
CTGCATTCCTGCCCACCTTTCCAAAATCATTTCTTTTCCTCCCTCCCTTC
CTCCCTCCCCAGCCCGCCTCCTCTGGTTCAACCCTGATTCCTTCAATGAC
CCGCGTGAGTTTGAGCTCGTCGGCATATTGCTCGGCCTTGCCCTCTACAA
CGCCGTCCTCCTCGATCTCCACTTCCCCCCCATTCTCTACAAAAAACTTA
TGCTACCGCCCTCCAGCCCCTCCTCTTC back to topCoding sequence (CDS) from alignment at chr4:311795..315572- >NO04G00970.1 ID=NO04G00970.1|Name=NO04G00970.1|organism=Nannochloropsis oceanica|type=CDS|length=2496bp|location=Sequence derived from alignment at chr4:311795..315572- (Nannochloropsis oceanica) ATGGCTTGGTTACCTCGGAGGGAGGCCGGAGGCCGTGGTCGCGTGGGTAG CCGCGGCGCGCCGATAACCTCCCAACGGATCGACGAGGATGCTTTTACTT GCATCATCGTTTTCAATCACGCCACTATAAACACACTCAGGAATTCTTAC CCCACAGCTATTTTGCGCTGTATCTACAGCATCTTGGTTGCCTCCGCTAC CTCTTTGGGTCGCTCCCTCGACGCATTTGGCTCCGCAAAAACGAATTCTC TTCACCCCACCTTCTTTCCCAACTCGTACGACACACCAAGCTTTATCACC CGAAGCATTATGGCGGGCAGTCCAGAAGACGCCCGTCGTGCAATGGAACT CACATTCAAGGCCCATTTTTCGGATTTGGTTGCAGCCGGAGTACCTCGCA ATGTCGCCGCTGCCCGAGCACTGCAGGCGACCCAGCAAGAGGCGGCGGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGGAGGAGGAGGAG GAGGAGAAGGACTTGGGACGACACGGATGGAGGAAGAAGAGATGCAAGTG GAGGAGATGGGTACGTCCTCATCTTATTCCTCTATTTCTACATCGGAAGC AGCCGTAGCGATGAGGGAGGAGGGGGAGGAGGGACGGAAGGAGGGGAAGG GAACGGGAGTGGATGGTGAGGAGGTGAAGGAGGAAGAAGATGGAGAAGAT TCGAGCGACGACAATGAGGAGGAGGACGGGGAGGATGGCATGAGTGTCGA TGGCGAGAAGGAGGAAGAGGAGGAGGATGGGGGGGACAACAAAGAGTGTC TGTCGGTAGAGACGTTGAAGAGTCTCGTGGAAGTGGCGCAGGAATCAGGG GACTACACGGAGTTAAAGGCCTTCTTGACGTCTGGATTTTCGCATTCCAA GATCTTGAACGCGAGCTTCATCCCTCGTAAGAAAGTGGGGGTGTCAGGAG GAGGAGGAGGAGGAGGAGGAGGAGAGATGGCGGAAGGAAAGAAGGGGGAA GGGGAAGAGAGTATGGAGATGGACGATGAGGCCATGCCACTACCACCCAC CTTGTCTTCCGAGGAGGGAGGGAGGGAGGAAGGAAGAGGGGGCCCGCCGT TGGCAATTACGTTGGACCATGAGGCGGTGGTGCAGTTTTACACTGCACTG GTGGGGGCGGACGAAGTCTACCGTCAGCGAGGACGGAAGAAGGAGGGGCA GAAGGAGGAAGGGAACGAGGAAGAGGAGGAGGAAGGATTGATGGACGTGG TTCGCAATGCGCAGGCGAAGCTGGCGGCGCAATTGCATGCTGAGGCTACT GCTACTGCTGCTGCTACTTCCTCCTCGTCGTCAGGGAGGGGTGGTGAAGG AGAAGGGAACAAGGGGAAACATGTTCGTGCCACAGCTAAGAAACGTCCGC GCAAGGAGGAGGAGGTGGGAGGAGGAGCGGGTGCAGCTTCTGCCCTTTCC TCCTCCTCCTCATCCCTCCCTCCTCCCACCGATACCTCCCTTCCCCCCCC TCCCCCCCAAACTCGAAAGAAACGGTTGGCCGCCAAACGGGCCAGGGCAG CCCGTCGAGCGCACCTCGCCCTCCCTCGGTCCCTCCGTCAGTACGTCCTT CTCCTTGAATCCCCCGAGAGCTGCGACCCTTCCTGGCAACGCTACGTGGC CCCCTCCCTCTTCGCGGCCATCGTCCTCCTTCCCTCCCTCGCGAAGGACC TGCTCAAGGAGTGGATGGCGGGGGGAGAGAGGGGGGGAGGGAGGGAGGGA AGAGGGGCAATAACGCGGCTGGGCAGGTGGGTGGCGGCCCTGCAGCAATA CATAACCATCCGGTGCCTGGAGGAGCAATCTCCCCGGGCCTACGCGGACG TGAAGACTGCTGTCAGGGTCATGGCCATACTGTACAAGGCGAACCAACTG AGGGAGGGAGGCATGGAGGGGGGGGTCGTGCCGTTGGCTGATTTCTACAA TGGAGCCGTTAACGAGGCCTTGGAACGCACCCGCGATGAGGACGAGGACG AAGAGAAGGACGAGGAGGAGGAGGACGAGGAGGCGGCACGCATCGTGCGA ATCCAACGTCGGCGATTTTTCCACATTGGCCTTGAGTTTGAGACATGGCG CCAAGACAGAGAGCGGCTTCGACGGCGGGGGAGGGAGGGAGGGAGGGAAG GGGCATTCGAACCCCGGACTATTGTCTTTTATCCGTTTTTGTTGACGCCG GCGGTGAAAGCGCGGTTGCTGCACTTCGACTGCGTGGAGCAGATGCGGAG GTGGGGAAGGAAGAAAGGAAGGGAGGGAACGGGCGAGGCGAAGGAGGAAG TGGGTGTGAGGTGTTTGTGTGTTTGCTCGTCTCTCCGTCCCTCCATACAT TCCCCCTCCCTCAATTCAAAATGCTCAGGGCGGATGAAGGAGATAAATAA CACGCACGCGTCACGGGACAATATTAACACCACCATTTTACACTAG back to top
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