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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr4 | genome | chr4:251024..254065 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO04G00730.1 vs.
Match: EWM28482.1 (phosphoinositol transporter, partial [Nannochloropsis gaditana]) HSP 1 Score: 413.7 bits (1062), Expect = 1.100e-111 Identity = 304/606 (50.17%), Postives = 362/606 (59.74%), Query Frame = 0
Query: 131 YIWNKLQPEDDERGAMISVLDVENVGIMDLRGDALEFLKAASKVVQLHYVERSHKMFILNAPSWFNVLWKVIAPLLHENTRQKINILGKDHKAVLDVIDASCLPVRYGGTDDMALGEAPEEVDFRAYLDDVLRGKVGWEGGDEEE----GGKTTTAVVAAGCGSGGNNGGGGGGGGE-GGGGLPTAAAAPTAAAAPPAAAPAPQPASSLWGARLVGVGQRVAGGMVGGFKALRPAFLTPLSDAQKANLGRENRFVYDEGRRQWILIEEEPEEEEVDEEEE----------VEAEEEERGGRNSSAGAECGGVGGREEGGGGGGGGGGGGGGGEEEEEGENKASAAAAIVEGEEVE------------------SIVEDREELARTRSGSILLLLLVAWRALALSLLLVLPLWLADQHGSAPYEIALLLFCGGIVATALWALIERTHLLPPFPTCLATLASLAVACLLLGPLSSSSSRHPE------AYREAAGRGLSVVIAAFAVLMMGGSVSWAVLLSMALFGKEEKGARDDLLPSLLLADVLGAVLGPVIYSASISYGGEG----GGEATWVSVVGWVGVGSVLLVGGLGKSLPRPMMTTEGGR 694
YIWNKLQPEDDERGAM+S+LDV +VGIMDLRGDALEFLKAAS+VVQ HYVERS+KMFILNAP+WF+VLWKVIAPLLHENTR+KINILGKDH VL+VI LPV YGG D +ALGEAPEEVDFRAY V R G EG E E GG+ ++ G+G GG E GG P + +W L+GVG+R + GG +ALRPAFLTPLS AQ+ANLGRENRFVYDE RRQW+LIEEE EEEE + E E EEER R A E GG G G GG EE E A+A A VE E E + EE RT GS+ L+LLVAWRA+ALSLL V+PLWL D +A +E+ALL F G +VA LWA+ L+ + C+ATL L++A LLLGPL SS RE AG LSV++AA ++L GS SWAV +S ALF KE AR DL+PSLLLAD +G +LGPVI+S + + E GG A W S+VG+ G+ SV ++ + L P +T+ GGR
Sbjct: 15 YIWNKLQPEDDERGAMVSILDVAHVGIMDLRGDALEFLKAASRVVQQHYVERSYKMFILNAPAWFSVLWKVIAPLLHENTRRKINILGKDHAPVLEVIAPHHLPVAYGGNDPLALGEAPEEVDFRAY---VQRVNSGLEGRAEAEEVGVGGEKAGSLPTGSSGTGNRERKVGGRRAEVDDGGEPERG--------------GDELGPGVWREGLLGVGERAMARVAGGLQALRPAFLTPLSTAQRANLGRENRFVYDEHRRQWVLIEEEEEEEEEERWEREHRPHGRGRGAEDMEEERLVRAIQAAHEMGGRSSSISGRLAAVLRGEEGGRKGEEAEATAAAAAQARTVEDLEGERQGGESEGGREAGRKERGRVESPGEEKNRTWPGSVFLVLLVAWRAMALSLLWVVPLWLLDTWDTAAHEVALLFFLGAMVAVGLWAVHATCPLVSVYAACIATLVGLSLASLLLGPLGGSSDGSGRWVGLSGEGRETAGEALSVIMAALSLLTTAGSFSWAVHVSRALFDKEASEARRDLIPSLLLADAVGVILGPVIFSTARASEQETSHPLGGRAMWFSIVGFAGLASVGMIVWPARPLLAP-LTSTGGR 602
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G00730.1 ID=NO04G00730.1|Name=NO04G00730.1|organism=Nannochloropsis oceanica|type=mRNA|length=2539bp ATGAGCGAGGAGGAGGTGATGGCAGTTTTGCAGGAGGCGGAGGAGGGAGG TAGGGGGGGCGGGTATGTGCAAACGCCCCATCATCATGTGCATTTGTTGC GGATTCCCGAGCGGTATGTGAAGGGCTGCAATGGAGACATGGAGGAAGCG GCGAGGCGGTGGAAGGACACATTGGCCTGGAGGGAGGAGCAGGGAATCGA TCGTATACTGCTGGAGCCACAGAGAAATTTTGCATTGATTAAGGAGTGTT ATCCGCATTTCCTGCACCGGAGGGATAGGGGGGGACGGCCGGTGTATTAT GAGCTGCTAGGGCAGATTAACTTGAAGAAGCTGAAGGCGCAGGGCGTGAC TTTGGACGAGGTGGTTCGATACTACATCTTCCTCACTGAGTATATTTGGA ACAAACTCCAGCCCGAGGATGATGAGCGTGGGGCGATGATCTCTGTCCTA GACGTGGAGAATGTGGGCATAATGGATTTACGGGGGGATGCGCTGGAGTT CCTTAAGGCGGCGAGTAAAGTGGTGCAGCTTCATTACGTGGAAAGGTCGC ATAAGATGTTTATATTGAATGCGCCTTCGTGGTTTAATGTGCTGTGGAAG GTCATCGCCCCTCTCCTCCATGAGAACACCCGCCAAAAAATCAATATCTT GGGGAAGGACCACAAGGCCGTCCTGGATGTCATTGACGCCAGCTGCTTAC CAGTGAGGTACGGAGGGACGGATGACATGGCCCTGGGGGAGGCGCCGGAG GAGGTAGACTTCAGGGCGTATCTGGATGACGTGCTGAGGGGGAAGGTGGG GTGGGAAGGAGGGGATGAAGAGGAGGGAGGGAAGACGACGACGGCGGTAG TTGCTGCTGGTTGTGGTAGTGGTGGTAATAATGGTGGAGGAGGTGGAGGG GGAGGAGAAGGAGGAGGAGGATTGCCAACAGCAGCAGCGGCACCAACAGC AGCAGCAGCACCACCCGCAGCAGCACCAGCACCACAACCGGCATCTTCCT TGTGGGGCGCTCGCTTAGTAGGGGTGGGTCAGCGCGTGGCGGGAGGGATG GTGGGAGGCTTCAAGGCGCTCAGGCCCGCTTTTTTGACACCCTTGTCAGA CGCCCAGAAAGCAAATCTGGGAAGGGAGAATAGGTTTGTGTATGACGAGG GGAGGAGACAATGGATTCTGATTGAGGAGGAACCGGAGGAGGAGGAGGTG GACGAGGAGGAAGAGGTGGAGGCTGAGGAGGAGGAACGTGGCGGCCGCAA CAGCAGCGCAGGCGCGGAATGTGGAGGAGTTGGAGGCAGGGAGGAAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGAGGAGGAG GAAGAGGGGGAGAATAAAGCGTCTGCTGCAGCAGCAATAGTGGAGGGGGA GGAAGTGGAATCAATAGTGGAAGATCGAGAAGAGCTGGCCAGGACAAGGA GCGGTTCGATTCTGCTGCTGCTCCTGGTGGCTTGGCGGGCGCTCGCTCTC TCCCTCCTCCTTGTCCTCCCCCTGTGGTTGGCAGATCAGCATGGTAGTGC CCCTTATGAGATCGCCTTATTGCTTTTCTGCGGAGGAATTGTAGCTACTG CCCTGTGGGCCCTGATCGAGAGGACGCATCTCCTCCCTCCCTTCCCCACC TGCCTTGCCACACTCGCCTCCCTTGCCGTGGCATGTCTGTTGCTCGGGCC TCTCAGCAGCAGCAGCAGCAGGCATCCAGAGGCATACAGGGAGGCGGCGG GACGGGGATTGAGTGTCGTAATAGCAGCATTTGCCGTCCTGATGATGGGG GGCTCCGTCTCGTGGGCAGTACTTTTGTCTATGGCTTTGTTTGGTAAGGA GGAGAAGGGGGCCAGGGATGATCTTCTTCCCTCTCTCCTCCTTGCCGATG TGCTGGGCGCGGTGCTTGGGCCGGTGATCTACTCGGCGTCGATATCGTAC GGAGGGGAGGGGGGAGGGGAGGCTACGTGGGTGAGTGTGGTTGGATGGGT GGGGGTGGGGAGTGTGCTGCTTGTTGGAGGATTGGGAAAGTCTCTGCCTC GGCCGATGATGACGACGGAGGGGGGTAGATAGGGAGGAAAGGAGGGCGAA CAGGATATAAGAAGGAGGACGAGGGTGGGGAAGACGGTAGAGGTATTGTG GAAGACGTGGATACAAGCTTGAAGGTGTTGAGGGAAGAGGGGGGGCAGGG AGTTAGAATATGTGTACATTGTGTAGGGGCACAAAAATGATCGAAGACAC ATTAAGGCTGTTCAATAAACATTACGTAAGGGCCAGGCCAAAAGTGGAGG AACCCCCGGAAGAAAAGATGCGCGAAAAATATAAAAACAGTCGGGAAGGC AACAGTAAAAAGAGGAGCAGGAGCAGGAGCAGGAGGGAGGAAGGGGGAAG GGCGAGGCAGCAGGAGGAGGAGCATTAGGAGCATGGGAGGGAGGGAAGGA GGGCGAGGGGGCAACGCACACGACACATGGTCCAACTGCATCACGTACAC AGAGATGAGAAAAGCTGAACTACAAGTGACTGACAAAGT back to topprotein sequence of NO04G00730.1 >NO04G00730.1-protein ID=NO04G00730.1-protein|Name=NO04G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=694bp MSEEEVMAVLQEAEEGGRGGGYVQTPHHHVHLLRIPERYVKGCNGDMEEA ARRWKDTLAWREEQGIDRILLEPQRNFALIKECYPHFLHRRDRGGRPVYY ELLGQINLKKLKAQGVTLDEVVRYYIFLTEYIWNKLQPEDDERGAMISVL DVENVGIMDLRGDALEFLKAASKVVQLHYVERSHKMFILNAPSWFNVLWK VIAPLLHENTRQKINILGKDHKAVLDVIDASCLPVRYGGTDDMALGEAPE EVDFRAYLDDVLRGKVGWEGGDEEEGGKTTTAVVAAGCGSGGNNGGGGGG GGEGGGGLPTAAAAPTAAAAPPAAAPAPQPASSLWGARLVGVGQRVAGGM VGGFKALRPAFLTPLSDAQKANLGRENRFVYDEGRRQWILIEEEPEEEEV DEEEEVEAEEEERGGRNSSAGAECGGVGGREEGGGGGGGGGGGGGGGEEE EEGENKASAAAAIVEGEEVESIVEDREELARTRSGSILLLLLVAWRALAL SLLLVLPLWLADQHGSAPYEIALLLFCGGIVATALWALIERTHLLPPFPT CLATLASLAVACLLLGPLSSSSSRHPEAYREAAGRGLSVVIAAFAVLMMG GSVSWAVLLSMALFGKEEKGARDDLLPSLLLADVLGAVLGPVIYSASISY GGEGGGEATWVSVVGWVGVGSVLLVGGLGKSLPRPMMTTEGGR* back to topmRNA from alignment at chr4:251024..254065- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G00730.1 ID=NO04G00730.1|Name=NO04G00730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3042bp|location=Sequence derived from alignment at chr4:251024..254065- (Nannochloropsis oceanica) ATGAGCGAGGAGGAGGTGATGGCAGTTTTGCAGGAGGCGGAGGAGGGAGG
TAGGGGGGGCGGGTATGTGCAAACGCCCCATCATCATGTGCATTTGTTGC
GGATTCCCGAGCGGTATGTGAAGGGCTGCAATGGAGACATGGAGGAAGCG
GCGAGGCGGTGGAAGGACACATTGGCCTGGAGGGAGGAGCAGGGAATCGA
TCGTATACTGCTGGAGCCACAGAGAAATTTTGCATTGATTAAGGAGTGTT
ATCCGCATTTCCTGCACCGGAGGGATAGGGGGGGACGGCCGGTGTATTAT
GAGCTGCTAGGGTAGGGAGGGAGGGAGGGAGACGGGTTGTCACTCCGAAA
GGTACCGCCTGACCTTCGTATTTTGCTTCATTTCTATTGAACACGAACAG
GCAGATTAACTTGAAGAAGCTGAAGGCGCAGGGCGTGACTTTGGACGAGG
TGGTTCGATACTACATCTTCCTCACTGAGTAAGCAGGGGGGGCAGGCGGG
ACGAAGGGACGGAGGGACAGACGGGCGGAGGGTTAGGTTGATGTTTATAC
GAAGCTCATTTATCCTACCGCTTCATTGCACTCGACTATTTTATGGATCT
GTTATTCACTGAATCTTCATGCCCGTCTCCTACCCCCATTCAGGTATATT
TGGAACAAACTCCAGCCCGAGGATGATGAGCGTGGGGCGATGATCTCTGT
CCTAGACGTGGAGAATGTGGGCATAATGGATTTACGGGGGGATGCGCTGG
AGTTCCTTAAGGCGGCGAGTAAAGTGGTGCAGCTTCATTACGTGGAAAGG
TCGCATAAGATGTTTATATTGAATGCGCCTTCGTGGTTTAATGTGCTGTG
GAAGGTAGGGAAGGAGGAAGGGAGGGAGGGAAGGAGGGAAGGGGGTAGAG
GAGGAAATATATGTAAATCAGATTTGTCGACGATGTCCAGTATGCGTATT
TACCCTCCCTCCCTCCCTCCCTGTGCAGGTCATCGCCCCTCTCCTCCATG
AGAACACCCGCCAAAAAATCAATATCTTGGGGAAGGACCACAAGGCCGTC
CTGGATGTCATTGACGCCAGCTGCTTACCAGTGAGGTACGGAGGGACGGA
TGACATGGCCCTGGGGGAGGCGCCGGAGGAGGTAGACTTCAGGGCGTATC
TGGATGACGTGCTGAGGGGGAAGGTGGGGTGGGAAGGAGGGGATGAAGAG
GAGGGAGGGAAGACGACGACGGCGGTAGTTGCTGCTGGTTGTGGTAGTGG
TGGTAATAATGGTGGAGGAGGTGGAGGGGGAGGAGAAGGAGGAGGAGGAT
TGCCAACAGCAGCAGCGGCACCAACAGCAGCAGCAGCACCACCCGCAGCA
GCACCAGCACCACAACCGGCATCTTCCTTGTGGGGCGCTCGCTTAGTAGG
GGTGGGTCAGCGCGTGGCGGGAGGGATGGTGGGAGGCTTCAAGGCGCTCA
GGCCCGCTTTTTTGACACCCTTGTCAGACGCCCAGAAAGCAAATCTGGGA
AGGGAGAATAGGTTTGTGTATGACGAGGGGAGGAGACAATGGATTCTGAT
TGAGGAGGAACCGGAGGAGGAGGAGGTGGACGAGGAGGAAGAGGTGGAGG
CTGAGGAGGAGGAACGGTTGGTTCGTGCCATCCAGGCGGCGCACGAGGTG
GGGGGGAGGAGCAGTAGTATTAGAGGACGTTTAGCGGCCGTTTTGAGGGG
AGGGGGAGGGAAAGAGGGAGCAAGGAACAATGCGGACGCAGTGGCGGCCG
CAACAGCAGCGCAGGCGCGGAATGTGGAGGAGTTGGAGGCAGGGAGGAAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGAGGAG
GAGGAAGAGGGGGAGAATAAAGCGTCTGCTGCAGCAGCAATAGTGGAGGG
GGAGGAAGTGGAATCAATAGTGGAAGATCGAGAAGAGCTGGCCAGGACAA
GGAGCGGTTCGATTCTGCTGCTGCTCCTGGTGGCTTGGCGGGCGCTCGCT
CTCTCCCTCCTCCTTGTCCTCCCCCTGTGGTTGGCAGATCAGCATGGTAG
TGCCCCTTATGAGATCGCCTTATTGCTTTTCTGCGGAGGAATTGTAGCTA
CTGCCCTGTGGGCCCTGATCGAGAGGACGCATCTCCTCCCTCCCTTCCCC
ACCTGCCTTGCCACACTCGCCTCCCTTGCCGTGGCATGTCTGTTGCTCGG
GCCTCTCAGCAGCAGCAGCAGCAGGCATCCAGAGGCATACAGGGAGGCGG
CGGGACGGGGATTGAGTGTCGTAATAGCAGCATTTGCCGTCCTGATGATG
GGGGGCTCCGTCTCGTGGGCAGTACTTTTGTCTATGGCTTTGTTTGGTAA
GGAGGAGAAGGGGGCCAGGGATGATCTTCTTCCCTCTCTCCTCCTTGCCG
ATGTGCTGGGCGCGGTGCTTGGGCCGGTGATCTACTCGGCGTCGATATCG
TACGGAGGGGAGGGGGGAGGGGAGGCTACGTGGGTGAGTGTGGTTGGATG
GGTGGGGGTGGGGAGTGTGCTGCTTGTTGGAGGATTGGGAAAGTCTCTGC
CTCGGCCGATGATGACGACGGAGGGGGGTAGATAGGGAGGAAAGGAGGGC
GAACAGGATATAAGAAGGAGGACGAGGGTGGGGAAGACGGTAGAGGTATT
GTGGAAGACGTGGATACAAGCTTGAAGGTGTTGAGGGAAGAGGGGGGGCA
GGGAGTTAGAATATGTGTACATTGTGTAGGGGCACAAAAATGATCGAAGA
CACATTAAGGCTGTTCAATAAACATTACGTAAGGGCCAGGCCAAAAGTGG
AGGAACCCCCGGAAGAAAAGATGCGCGAAAAATATAAAAACAGTCGGGAA
GGCAACAGTAAAAAGAGGAGCAGGAGCAGGAGCAGGAGGGAGGAAGGGGG
AAGGGCGAGGCAGCAGGAGGAGGAGCATTAGGAGCATGGGAGGGAGGGAA
GGAGGGCGAGGGGGCAACGCACACGACACATGGTCCAACTGCATCACGTA
CACAGAGATGAGAAAAGCTGAACTACAAGTGACTGACAAAGT back to topCoding sequence (CDS) from alignment at chr4:251024..254065- >NO04G00730.1 ID=NO04G00730.1|Name=NO04G00730.1|organism=Nannochloropsis oceanica|type=CDS|length=2082bp|location=Sequence derived from alignment at chr4:251024..254065- (Nannochloropsis oceanica) ATGAGCGAGGAGGAGGTGATGGCAGTTTTGCAGGAGGCGGAGGAGGGAGG TAGGGGGGGCGGGTATGTGCAAACGCCCCATCATCATGTGCATTTGTTGC GGATTCCCGAGCGGTATGTGAAGGGCTGCAATGGAGACATGGAGGAAGCG GCGAGGCGGTGGAAGGACACATTGGCCTGGAGGGAGGAGCAGGGAATCGA TCGTATACTGCTGGAGCCACAGAGAAATTTTGCATTGATTAAGGAGTGTT ATCCGCATTTCCTGCACCGGAGGGATAGGGGGGGACGGCCGGTGTATTAT GAGCTGCTAGGGCAGATTAACTTGAAGAAGCTGAAGGCGCAGGGCGTGAC TTTGGACGAGGTGGTTCGATACTACATCTTCCTCACTGAGTATATTTGGA ACAAACTCCAGCCCGAGGATGATGAGCGTGGGGCGATGATCTCTGTCCTA GACGTGGAGAATGTGGGCATAATGGATTTACGGGGGGATGCGCTGGAGTT CCTTAAGGCGGCGAGTAAAGTGGTGCAGCTTCATTACGTGGAAAGGTCGC ATAAGATGTTTATATTGAATGCGCCTTCGTGGTTTAATGTGCTGTGGAAG GTCATCGCCCCTCTCCTCCATGAGAACACCCGCCAAAAAATCAATATCTT GGGGAAGGACCACAAGGCCGTCCTGGATGTCATTGACGCCAGCTGCTTAC CAGTGAGGTACGGAGGGACGGATGACATGGCCCTGGGGGAGGCGCCGGAG GAGGTAGACTTCAGGGCGTATCTGGATGACGTGCTGAGGGGGAAGGTGGG GTGGGAAGGAGGGGATGAAGAGGAGGGAGGGAAGACGACGACGGCGGTAG TTGCTGCTGGTTGTGGTAGTGGTGGTAATAATGGTGGAGGAGGTGGAGGG GGAGGAGAAGGAGGAGGAGGATTGCCAACAGCAGCAGCGGCACCAACAGC AGCAGCAGCACCACCCGCAGCAGCACCAGCACCACAACCGGCATCTTCCT TGTGGGGCGCTCGCTTAGTAGGGGTGGGTCAGCGCGTGGCGGGAGGGATG GTGGGAGGCTTCAAGGCGCTCAGGCCCGCTTTTTTGACACCCTTGTCAGA CGCCCAGAAAGCAAATCTGGGAAGGGAGAATAGGTTTGTGTATGACGAGG GGAGGAGACAATGGATTCTGATTGAGGAGGAACCGGAGGAGGAGGAGGTG GACGAGGAGGAAGAGGTGGAGGCTGAGGAGGAGGAACGTGGCGGCCGCAA CAGCAGCGCAGGCGCGGAATGTGGAGGAGTTGGAGGCAGGGAGGAAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGAGGAGGAG GAAGAGGGGGAGAATAAAGCGTCTGCTGCAGCAGCAATAGTGGAGGGGGA GGAAGTGGAATCAATAGTGGAAGATCGAGAAGAGCTGGCCAGGACAAGGA GCGGTTCGATTCTGCTGCTGCTCCTGGTGGCTTGGCGGGCGCTCGCTCTC TCCCTCCTCCTTGTCCTCCCCCTGTGGTTGGCAGATCAGCATGGTAGTGC CCCTTATGAGATCGCCTTATTGCTTTTCTGCGGAGGAATTGTAGCTACTG CCCTGTGGGCCCTGATCGAGAGGACGCATCTCCTCCCTCCCTTCCCCACC TGCCTTGCCACACTCGCCTCCCTTGCCGTGGCATGTCTGTTGCTCGGGCC TCTCAGCAGCAGCAGCAGCAGGCATCCAGAGGCATACAGGGAGGCGGCGG GACGGGGATTGAGTGTCGTAATAGCAGCATTTGCCGTCCTGATGATGGGG GGCTCCGTCTCGTGGGCAGTACTTTTGTCTATGGCTTTGTTTGGTAAGGA GGAGAAGGGGGCCAGGGATGATCTTCTTCCCTCTCTCCTCCTTGCCGATG TGCTGGGCGCGGTGCTTGGGCCGGTGATCTACTCGGCGTCGATATCGTAC GGAGGGGAGGGGGGAGGGGAGGCTACGTGGGTGAGTGTGGTTGGATGGGT GGGGGTGGGGAGTGTGCTGCTTGTTGGAGGATTGGGAAAGTCTCTGCCTC GGCCGATGATGACGACGGAGGGGGGTAGATAG back to top
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