NO04G00710.4, NO04G00710.4 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G00710.4
Unique Name	NO04G00710.4
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3676
Alignment location	chr4:243915..248485 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:243915..248485 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G00710.4 vs.
Match: EWM28488.1 (snf2 domanin containing helicase [Nannochloropsis gaditana])

HSP 1 Score: 963.8 bits (2490), Expect = 3.200e-277
Identity = 547/743 (73.62%), Postives = 594/743 (79.95%), Query Frame = 0

Query:   17 SPQPKRGTPQKRDPSKYDSATS---NNNISPATIASSSPP---SSSAKRRKT----------VDSSSSSRSNGGKGTDHPS-PFVLTHTKSEREMAIANDDSAYVEDPMITASMKAAQEEAEQAVAAARAQEDEASLQGGLVVPVLLRSAGVTAQEAPATDAEEGDNEDSATPADTTGTADASSSNISSAPSTLEMTNDATTRSGLRRTAQLETLLQKASHFNNFILGKLEHGGKAAASATSAADEKQKKKTAAAAASAKKGKRGKG-STKEEADATAQVAQNREEALEDAARKMAEGKGEEGVMEQPASLQNGVLKGYQLEGLYWLSSLWMNGLNGILADEMGLGKTIQVIALFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTAAEREVLREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMRYQWRWLVVDEGQRIKNRNGRLFHELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDNLGVFRSWFGFQNIGKDTTVDDIIDEEHRERVVSKLHEVLRPFLLRRMKRDVKIDLPEKKELVVYAHMSEIQHDYYRLGQAGQLREALMQQGVPDADKIRQTNPQMLQRKICNHPFLVAEPITRDGTPIGEANPKILIEACGKLKLLDRMMRKLYAQGHRVLLFSQMTEMLTLLEDYLHYRRWKYCRIDGSVKIDERQEQIEAFNKDRSIFCFLLSTRAGGLGINLAGADTVSVFPPSFPP 742
            +P  +R   QK  P K D+  +   + N    T +SS+ P   S S KRRKT          V S S +R + G    HPS P  L  TKSERE     DD   + DP++TAS+KAAQEEAE+AVA ARA+EDEA  + G VVP LL+  GVT  +AP   AEE          ++T  A AS ++ S  P  L M   AT+RSG+RRTAQL+TLLQKASHFNNFILGKLEHGGKAAASA      K KKK            RG G S+ E+  A AQ A +REEAL DAARKM   KG EG MEQPASL+NGVLK YQLEGL WLSSLWMNGLNGILADEMGLGKTIQVI+LFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGT  ER+ LREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLM Y WRWLVVDEGQRIKNRNGRLF+ELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFD+LGVFRSWFGFQ+IGKDTTVDDIIDEEHRERVV+KLHEVLRPFLLRRMK DV IDLP KKELVVYAHMSEIQHDYYRL QAGQLREAL+QQGVPDADKIRQTNPQM+ RKICNHPFLVAEP+T+ GTPIGEANPKILIEACGKLKLLDRMM +L+AQGHRVLLFSQMTEMLT+LEDYLHYR+WKYCRIDGSVK+D RQEQIEAFNKD SIFCFLLSTRAGGLGINLAGADTV ++   + P
Sbjct:   17 TPSSQRQPLQKHTPRKTDTTRTVVGSGNGKKQTRSSSASPTKCSPSFKRRKTESEGESAVPTVLSQSINRLSPGP---HPSSPHDLVCTKSERETGDL-DDLRALNDPILTASIKAAQEEAERAVAVARAKEDEARKKSGPVVPRLLQGVGVTVNDAPT--AEEA--------LESTSNAPASHASSSLDPG-LPMNGAATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSKKK------------RGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASLKNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMSYHWRWLVVDEGQRIKNRNGRLFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWFGFQSIGKDTTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAKKELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLRKICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGHRVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNKDPSIFCFLLSTRAGGLGINLAGADTVIIYDSDWNP 732

The following BLAST results are available for this feature:

BLAST of NO04G00710.4 vs.

BLAST of NO04G00710.4 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28488.1	3.200e-277	73.62	snf2 domanin containing helicase [Nannochloropsis ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G00710	NO04G00710	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00710.4	NO04G00710.4-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00710.4.cds1	NO04G00710.4.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00710.4.cds2	NO04G00710.4.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00710.4.cds3	NO04G00710.4.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00710.4.cds4	NO04G00710.4.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00710.4.cds5	NO04G00710.4.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00710.4.cds6	NO04G00710.4.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:243915..248485-
coding sequence from alignment at chr4:243915..248485-

mRNA sequence

>NO04G00710.4 ID=NO04G00710.4|Name=NO04G00710.4|organism=Nannochloropsis oceanica|type=mRNA|length=3676bp
ACGACAGCTTGCAATTAAATCGTCCACGACCGTGTATTCTGCCGCCAGAA
TGGCCAACGAAATCAGAGTTCCTGCGGAAGGCAGCCACAAGGCTTCTTCG
CCACAACCAAAGCGTGGCACACCACAGAAGCGAGATCCTAGTAAATATGA
TAGCGCCACCAGCAACAACAACATAAGCCCGGCCACAATAGCGTCGTCTT
CCCCTCCTTCTTCTTCTGCTAAGCGCCGCAAGACGGTTGATAGCTCCAGC
AGCAGCAGAAGCAATGGCGGCAAAGGTACCGACCATCCTTCTCCCTTCGT
CCTCACGCACACCAAGAGCGAGCGCGAAATGGCCATAGCCAACGATGACA
GCGCTTACGTGGAAGACCCTATGATTACCGCATCAATGAAGGCTGCACAA
GAGGAAGCCGAACAAGCCGTGGCCGCGGCCCGAGCACAGGAAGACGAGGC
GTCCCTGCAAGGCGGTCTCGTGGTGCCTGTCCTGCTCCGATCCGCAGGGG
TAACGGCCCAAGAGGCTCCGGCTACCGATGCCGAGGAGGGAGACAATGAG
GATTCAGCCACTCCGGCAGATACCACTGGTACGGCTGACGCTTCTTCGTC
CAATATCTCCTCTGCACCCTCAACCTTAGAAATGACGAACGACGCCACGA
CCCGAAGCGGGCTCCGTCGCACGGCCCAGCTGGAAACCTTGCTGCAAAAG
GCCTCGCATTTCAACAACTTCATTTTGGGCAAACTGGAGCATGGGGGCAA
GGCGGCAGCCAGCGCCACTTCTGCCGCGGACGAAAAGCAGAAGAAAAAGA
CAGCAGCAGCAGCAGCGAGCGCAAAGAAAGGCAAAAGGGGGAAAGGTTCG
ACGAAAGAAGAAGCTGATGCGACAGCACAAGTAGCGCAGAACCGAGAGGA
GGCCCTGGAGGATGCAGCTCGGAAGATGGCGGAGGGCAAGGGGGAGGAGG
GGGTGATGGAGCAGCCGGCGTCGTTGCAGAATGGGGTGCTGAAAGGGTAT
CAGTTGGAGGGCCTCTACTGGCTCAGCTCGTTGTGGATGAATGGGTTGAA
CGGCATCCTGGCGGACGAGATGGGCCTGGGCAAGACCATCCAAGTAATCG
CGCTCTTCGCCCTCCTCCGCGAGAAGGGCGTCAATGGTCCCTTCCTCGTC
GTGGCGCCTCTTGCCACCCTGCCCAACTGGGTCCTGGAGGTCCGAAAATG
GCTGCCCTCGGCGAGTGTGTGCCTGTACCACGGCACGGCCGCGGAGAGAG
AGGTGTTGAGGGAGGAGCAGATGCCGGTGGGAAGGGAGAGGGAGACGAGC
AAGCTGTTTCCGATCGTGGTGACTTCGTACGAGATGGCCTCGATCGATAG
GAAGCATCTCATGAGGTACCAGTGGCGGTGGCTGGTGGTCGACGAAGGGC
AACGGATCAAGAACCGTAACGGTCGCCTGTTCCACGAACTGAAGGAGATT
CCCTCCGAATCTCGCCTCCTCCTCTCGGGGACCCCCATCCAGAACTCCCT
CGAGGAGCTATGGACGCTCCTCAATTTCTGCCAGCCGGACATCTTCGACA
ATCTGGGCGTGTTTCGCTCCTGGTTCGGCTTCCAGAACATTGGCAAGGAC
ACGACCGTGGACGACATCATCGACGAGGAGCACCGAGAAAGGGTGGTGAG
CAAGCTCCACGAGGTCCTCCGTCCCTTCCTCCTCCGCCGGATGAAGCGGG
ATGTCAAGATCGACCTTCCGGAGAAGAAGGAGCTGGTGGTGTATGCACAC
ATGTCGGAGATCCAGCACGACTATTACCGGCTGGGCCAGGCGGGGCAACT
GCGCGAAGCCTTAATGCAGCAGGGGGTCCCGGACGCAGACAAGATCCGGC
AAACAAATCCACAGATGTTGCAGCGTAAGATATGTAATCACCCTTTCCTC
GTCGCCGAGCCAATCACCAGAGACGGTACGCCGATAGGGGAGGCAAATCC
CAAGATCCTGATCGAGGCATGCGGGAAGCTTAAGCTGCTGGATAGGATGA
TGAGGAAGCTGTATGCCCAGGGCCACCGCGTCCTCCTGTTCTCCCAGATG
ACGGAGATGCTGACCCTTTTGGAAGACTACCTGCACTACCGTCGATGGAA
GTACTGCCGCATTGACGGCTCGGTCAAAATCGACGAACGGCAAGAGCAGA
TAGAGGCTTTCAACAAGGACCGGTCCATCTTCTGCTTCCTCCTCTCCACG
CGTGCCGGTGGACTGGGGATCAACTTGGCTGGGGCGGACACGGTGAGTGT
CTTCCCTCCCTCATTCCCCCCTTCCCTCCTCCCCTCTCCTTTTTTTTCAA
ACAAGAACGAGAAATGTAGATGATTCGTTTATCTTTCCTTGCTCCCTTCC
TCTCTCCCTTTCTCCCTCCCCCCCTCTCCCCCTTCTTACCTACAGGTCAT
CATCTACGACTCGGACTGGAACCCGCATCGGTACGTAAAACACCTCAGGA
GGGAAGAAGGAAGAAGAAGAAAAAGGACCAAAAAGACCGGGAGGGCATAA
CATGGGTGGGCACTCTCGCGCCCTTTTCTCCTCCCCTCCTCCTTTTTCTT
CCCCTTCCCAATCCATCACTACTTACCCACCCACCTCGCCTCCCCTCCCC
TTCCAACACCATCGCGACCTATCCACCTACCAACCGAACAGCGATGCCCA
AGCCCAAGACCGCGCCCACCGAATCGGCCAAACGCGTGACGTGGCGGTGT
ACCGTTTATTGACCGTGGGGAGTGTGGAGATTGAGATGATGGAGGCGCAG
ATCAGTAAGAAGAAGCTCGAGCGACTGTCCATCACGGGCGGAGATTTTAG
GAAGGCGGGGAGGAGGAGCAGGGGTGAGATGACGACGGAGAACCTCCGAA
GATTGCTCGCAGATGATGTGAAGGATATTCAGAGGAGGCATGGAGGGGAG
GAGGGGGCGGGGGAGGGGGGGGGGAGGGGGATATGAAGGAGGAGGAACTG
GACCAGATTCTGGATAGGAAGAGGATGTTCGAGGAGGGGGGTCTGAGCGT
AGAGGGACGGATGTATGACTTAGTGGTGATTGGAGGAAGTGATTTGTTGA
GTGGGATCAGTCAGGGGGGAAGGGAGTGAGGGAGAGATGGGGGAAGGAGG
TAAGACTAATGTTCCAATAGTAAGGAAAGCTGAGGATGAGGACGACAATA
AACATGAAAAGGAAATAGAGATGACAAAAAGTACTTCTTTGAGTTCAGCC
CCTTGGTCTTGCTTTCTCCTTGTGTGTTAATGCCGTCCAGTAAAACATGC
TATCCACACATGTGAGTACTTTGTGTCAGTGTCTCTGTCTCTTCCTTTCT
CTTTGTTATTTTTATTTTTATTGAATTTGATTGATTTGTTTCATTTTTAT
AAAGGGACAATGCATTTGATTGCCACACGAGACAGAAAACTTTTTCCTTC
CCACTCTGCTTCCTCTTCTCGTCAGCGCCTCCCTTGGTGACCGTGCGTCT
CCCTCATTTTGGATGATCTGCAGTCAACGCCCTTCTAGCGCTGCTGTTTG
TCGTCCATCACCTTCTTCCCAAAAAATTGAGTGATGCGAAGCATGCTCCC
ACTGCCGGGGCTCCTGCTCTTTGTACTACTGTTGCTGCTCGGGGTCGTCT
TTGTCTTCAATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCG
CCGCCGCCGCCGCCGCCACCGCGGCC

protein sequence of NO04G00710.4

>NO04G00710.4-protein ID=NO04G00710.4-protein|Name=NO04G00710.4|organism=Nannochloropsis oceanica|type=polypeptide|length=758bp
MANEIRVPAEGSHKASSPQPKRGTPQKRDPSKYDSATSNNNISPATIASS
SPPSSSAKRRKTVDSSSSSRSNGGKGTDHPSPFVLTHTKSEREMAIANDD
SAYVEDPMITASMKAAQEEAEQAVAAARAQEDEASLQGGLVVPVLLRSAG
VTAQEAPATDAEEGDNEDSATPADTTGTADASSSNISSAPSTLEMTNDAT
TRSGLRRTAQLETLLQKASHFNNFILGKLEHGGKAAASATSAADEKQKKK
TAAAAASAKKGKRGKGSTKEEADATAQVAQNREEALEDAARKMAEGKGEE
GVMEQPASLQNGVLKGYQLEGLYWLSSLWMNGLNGILADEMGLGKTIQVI
ALFALLREKGVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTAAER
EVLREEQMPVGRERETSKLFPIVVTSYEMASIDRKHLMRYQWRWLVVDEG
QRIKNRNGRLFHELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFD
NLGVFRSWFGFQNIGKDTTVDDIIDEEHRERVVSKLHEVLRPFLLRRMKR
DVKIDLPEKKELVVYAHMSEIQHDYYRLGQAGQLREALMQQGVPDADKIR
QTNPQMLQRKICNHPFLVAEPITRDGTPIGEANPKILIEACGKLKLLDRM
MRKLYAQGHRVLLFSQMTEMLTLLEDYLHYRRWKYCRIDGSVKIDERQEQ
IEAFNKDRSIFCFLLSTRAGGLGINLAGADTVSVFPPSFPPSLLPSPFFS
NKNEKCR*

mRNA from alignment at chr4:243915..248485-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G00710.4 ID=NO04G00710.4|Name=NO04G00710.4|organism=Nannochloropsis oceanica|type=mRNA|length=4571bp|location=Sequence derived from alignment at chr4:243915..248485- (Nannochloropsis oceanica)
ACGACAGCTTGCAATTAAATCGTCCACGACCGTGTATTCTGCCGCCAGAA
TGGCCAACGAAATCAGAGTTCCTGCGGAAGGCAGCCACAAGGCTTCTTCG
CCACAACCAAAGCGTGGCACACCACAGAAGCGAGATCCTAGTAAATATGA
TAGCGCCACCAGCAACAACAACATAAGCCCGGCCACAATAGCGTCGTCTT
CCCCTCCTTCTTCTTCTGCTAAGCGCCGCAAGACGGTTGATAGCTCCAGC
AGCAGCAGAAGCAATGGCGGCAAAGGTACCGACCATCCTTCTCCCTTCGT
CCTCACGCACACCAAGAGCGAGCGCGAAATGGCCATAGCCAACGATGACA
GCGCTTACGTGGAAGACCCTATGATTACCGCATCAATGAAGGCTGCACAA
GAGGAAGCCGAACAAGCCGTGGCCGCGGCCCGAGCACAGGAAGACGAGGC
GTCCCTGCAAGGCGGTCTCGTGGTGCCTGTCCTGCTCCGATCCGCAGGGG
TAACGGCCCAAGAGGCTCCGGCTACCGATGCCGAGGAGGGAGACAATGAG
GATTCAGCCACTCCGGCAGATACCACTGGTACGGCTGACGCTTCTTCGTC
CAATATCTCCTCTGCACCCTCAACCTTAGAAATGACGAACGACGCCACGA
CCCGAAGCGGGCTCCGTCGCACGGCCCAGCTGGAAACCTTGCTGCAAAAG
GCCTCGCATTTCAACAACTTCATTTTGGGCAAACTGGAGCATGGGGGCAA
GGCGGCAGCCAGCGCCACTTCTGCCGCGGACGAAAAGCAGAAGAAAAAGA
CAGCAGCAGCAGCAGCGAGCGCAAAGAAAGGCAAAAGGGGGAAAGGTTCG
ACGAAAGAAGAAGCTGATGCGACAGCACAAGTAGCGCAGAACCGAGAGGA
GGCCCTGGAGGATGCAGCTCGGAAGATGGCGGAGGGCAAGGGGGAGGAGG
GGGTGATGGAGCAGCCGGCGTCGTTGCAGAATGGGGTGCTGAAAGGGTAT
CAGTTGGAGGGCCTCTACTGGCTCAGCTCGTTGTGGATGAATGGGTTGAA
CGGCATCCTGGCGGACGAGATGGTGAGTGATGTGTGGCGCGTTTAGAATG
AGGGGCGGGGCGGATAAGGGGGAGGAAGGGTGGGAGGGTGGGAGGAAAGG
CAGGAGGAAAGGAGGGGATGGTGCATGTGTGTACAGACAGCTTTCTGGTC
CTTGTAGGGTGCTTGTCGATTTCCTCTCTATGATCCACAGCTCCTGCGTT
CCCTCCCTCCCTTCCTCACTCCTTTCTCCCTTCCCTATCCCCCTAAGGGC
CTGGGCAAGACCATCCAAGTAATCGCGCTCTTCGCCCTCCTCCGCGAGAA
GGGCGTCAATGGTCCCTTCCTCGTCGTGGCGCCTCTTGCCACCCTGCCCA
ACTGGGTCCTGGAGGTCCGAAAATGGCTGCCCTCGGCGAGTGTGTGCCTG
TACCACGGCACGGCCGCGGAGAGAGAGGTGTTGAGGGAGGAGCAGATGCC
GGTGGGAAGGGAGAGGGAGACGAGCAAGCTGTTTCCGATCGTGGTGACTT
CGTACGAGATGGCCTCGATCGATAGGAAGCATCTCATGAGGTCGGTGGGT
GGGGTCTGGGAAATGTTTCGCGCCTTTTTCATATCCCCTTGCCCTCGGCC
TCACTCTTTGTCTCGCACTCCGTCTTTCTCTTCCCCTTTCTCTTTCTCTC
TCTCTTTTCCTCTCGCATCCATGGCCCTCGGATTGCTGTGTGTGATGGAC
GCAGGAGCTCACCGCCCTCCCCCTCCCTCCCTCTCCCCCTCCCTCACTCC
CTCCCTCCTTACGCAGGTACCAGTGGCGGTGGCTGGTGGTCGACGAAGGG
CAACGGATCAAGAACCGTAACGGTCGCCTGTTCCACGAACTGAAGGAGAT
TCCCTCCGAATCTCGCCTCCTCCTCTCGGGGACCCCCATCCAGAACTCCC
TCGGTACGCCCCTCCCTCCTCGTCCCTTCCTTCCGTCCCCATCACCTGGC
CTCCCTTTTACTACCGGCACTCACGTCTTGCTCCACATTCCTGATGTAAC
TCCCTCCCTTCCTCCCCTCTCCCTCTAGAGGAGCTATGGACGCTCCTCAA
TTTCTGCCAGCCGGACATCTTCGACAATCTGGGCGTGTTTCGCTCCTGGT
TCGGCTTCCAGAACATTGGCAAGGACACGACCGTGGACGACATCATCGAC
GAGGAGCACCGAGAAAGGGTGGTGAGCAAGCTCCACGAGGTCCTCCGTCC
CTTCCTCCTCCGCCGGATGAAGCGGGATGTCAAGATCGACCTTCCGGAGA
AGAAGGAGCTGGTGGTGTATGCACACATGTCGGAGATCCAGCACGACTAT
TACCGGCTGGGCCAGGCGGGGCAACTGCGCGAAGCCTTAATGCAGCAGGG
GGTCCCGGACGCAGACAAGGTAGGTAGACACCTGTCGTTCTTCCCTCCCT
CCCTGCCCCCCTCCCTTCCTCCCTTGGGCCTCTGACCGCATGTGGGGGGG
GATCTTGAGAGTCAGCACATCAGACAGCCTACCTTTCACCCCCCTCTCTT
TCTCCCTCCCTCCCTCAGATCCGGCAAACAAATCCACAGATGTTGCAGCG
TAAGATATGTAATCACCCTTTCCTCGTCGCCGAGCCAATCACCAGAGACG
GTACGCCGATAGGGGAGGCAAATCCCAAGATCCTGATCGAGGCATGCGGG
AAGCTTAAGCTGCTGGATAGGATGATGAGGAAGCTGTATGCCCAGGTGAG
GAGGAAGGAGGGAGTGAGGGAGGAAGGAGGGAGGGTGGGAGGGAGGCGAA
CTCCACGATTCTAGTTCAGGCGTGAGGAGTGCTGATATTGATGGCTGCAT
TCCTGGAGTCTAATTTTCACGTTCGTTCCCTCCCTCCCTCCCTCCCTATC
CCCCTACCTTCCCAGGGCCACCGCGTCCTCCTGTTCTCCCAGATGACGGA
GATGCTGACCCTTTTGGAAGACTACCTGCACTACCGTCGATGGAAGTACT
GCCGCATTGACGGCTCGGTCAAAATCGACGAACGGCAAGAGCAGATAGAG
GCTTTCAACAAGGACCGGTCCATCTTCTGCTTCCTCCTCTCCACGCGTGC
CGGTGGACTGGGGATCAACTTGGCTGGGGCGGACACGGTGAGTGTCTTCC
CTCCCTCATTCCCCCCTTCCCTCCTCCCCTCTCCTTTTTTTTCAAACAAG
AACGAGAAATGTAGATGATTCGTTTATCTTTCCTTGCTCCCTTCCTCTCT
CCCTTTCTCCCTCCCCCCCTCTCCCCCTTCTTACCTACAGGTCATCATCT
ACGACTCGGACTGGAACCCGCATCGGTACGTAAAACACCTCAGGAGGGAA
GAAGGAAGAAGAAGAAAAAGGACCAAAAAGACCGGGAGGGCATAACATGG
GTGGGCACTCTCGCGCCCTTTTCTCCTCCCCTCCTCCTTTTTCTTCCCCT
TCCCAATCCATCACTACTTACCCACCCACCTCGCCTCCCCTCCCCTTCCA
ACACCATCGCGACCTATCCACCTACCAACCGAACAGCGATGCCCAAGCCC
AAGACCGCGCCCACCGAATCGGCCAAACGCGTGACGTGGCGGTGTACCGT
TTATTGACCGTGGGGAGTGTGGAGATTGAGATGATGGAGGCGCAGATCAG
TAAGAAGAAGCTCGAGCGACTGTCCATCACGGGCGGAGATTTTAGGAAGG
CGGGGAGGAGGAGCAGGGGTGAGATGACGACGGAGAACCTCCGAAGATTG
CTCGCAGATGATGTGAAGGATATTCAGAGGAGGCATGGAGGGGAGGAGGG
GGCGGGGGAGGGGGGGGGGAGGGGGATATGAAGGAGGAGGAACTGGACCA
GATTCTGGATAGGAAGAGGATGTTCGAGGAGGGGGGTCTGAGCGTAGAGG
GACGGATGTATGACTTAGTGGTGATTGGAGGAAGTGATTTGTTGAGTGGG
ATCAGTCAGGGGGGAAGGGAGTGAGGGAGAGATGGGGGAAGGAGGTAAGA
CTAATGTTCCAATAGTAAGGAAAGCTGAGGATGAGGACGACAATAAACAT
GAAAAGGAAATAGAGATGACAAAAAGTACTTCTTTGAGTTCAGCCCCTTG
GTCTTGCTTTCTCCTTGTGTGTTAATGCCGTCCAGTAAAACATGCTATCC
ACACATGTGAGTACTTTGTGTCAGTGTCTCTGTCTCTTCCTTTCTCTTTG
TTATTTTTATTTTTATTGAATTTGATTGATTTGTTTCATTTTTATAAAGG
GACAATGCATTTGATTGCCACACGAGACAGAAAACTTTTTCCTTCCCACT
CTGCTTCCTCTTCTCGTCAGCGCCTCCCTTGGTGACCGTGCGTCTCCCTC
ATTTTGGATGATCTGCAGTCAACGCCCTTCTAGCGCTGCTGTTTGTCGTC
CATCACCTTCTTCCCAAAAAATTGAGTGATGCGAAGCATGCTCCCACTGC
CGGGGCTCCTGCTCTTTGTACTACTGTTGCTGCTCGGGGTCGTCTTTGTC
TTCAATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCC
GCCGCCGCCGCCACCGCGGCC

Coding sequence (CDS) from alignment at chr4:243915..248485-

>NO04G00710.4 ID=NO04G00710.4|Name=NO04G00710.4|organism=Nannochloropsis oceanica|type=CDS|length=2274bp|location=Sequence derived from alignment at chr4:243915..248485- (Nannochloropsis oceanica)
ATGGCCAACGAAATCAGAGTTCCTGCGGAAGGCAGCCACAAGGCTTCTTC
GCCACAACCAAAGCGTGGCACACCACAGAAGCGAGATCCTAGTAAATATG
ATAGCGCCACCAGCAACAACAACATAAGCCCGGCCACAATAGCGTCGTCT
TCCCCTCCTTCTTCTTCTGCTAAGCGCCGCAAGACGGTTGATAGCTCCAG
CAGCAGCAGAAGCAATGGCGGCAAAGGTACCGACCATCCTTCTCCCTTCG
TCCTCACGCACACCAAGAGCGAGCGCGAAATGGCCATAGCCAACGATGAC
AGCGCTTACGTGGAAGACCCTATGATTACCGCATCAATGAAGGCTGCACA
AGAGGAAGCCGAACAAGCCGTGGCCGCGGCCCGAGCACAGGAAGACGAGG
CGTCCCTGCAAGGCGGTCTCGTGGTGCCTGTCCTGCTCCGATCCGCAGGG
GTAACGGCCCAAGAGGCTCCGGCTACCGATGCCGAGGAGGGAGACAATGA
GGATTCAGCCACTCCGGCAGATACCACTGGTACGGCTGACGCTTCTTCGT
CCAATATCTCCTCTGCACCCTCAACCTTAGAAATGACGAACGACGCCACG
ACCCGAAGCGGGCTCCGTCGCACGGCCCAGCTGGAAACCTTGCTGCAAAA
GGCCTCGCATTTCAACAACTTCATTTTGGGCAAACTGGAGCATGGGGGCA
AGGCGGCAGCCAGCGCCACTTCTGCCGCGGACGAAAAGCAGAAGAAAAAG
ACAGCAGCAGCAGCAGCGAGCGCAAAGAAAGGCAAAAGGGGGAAAGGTTC
GACGAAAGAAGAAGCTGATGCGACAGCACAAGTAGCGCAGAACCGAGAGG
AGGCCCTGGAGGATGCAGCTCGGAAGATGGCGGAGGGCAAGGGGGAGGAG
GGGGTGATGGAGCAGCCGGCGTCGTTGCAGAATGGGGTGCTGAAAGGGTA
TCAGTTGGAGGGCCTCTACTGGCTCAGCTCGTTGTGGATGAATGGGTTGA
ACGGCATCCTGGCGGACGAGATGGGCCTGGGCAAGACCATCCAAGTAATC
GCGCTCTTCGCCCTCCTCCGCGAGAAGGGCGTCAATGGTCCCTTCCTCGT
CGTGGCGCCTCTTGCCACCCTGCCCAACTGGGTCCTGGAGGTCCGAAAAT
GGCTGCCCTCGGCGAGTGTGTGCCTGTACCACGGCACGGCCGCGGAGAGA
GAGGTGTTGAGGGAGGAGCAGATGCCGGTGGGAAGGGAGAGGGAGACGAG
CAAGCTGTTTCCGATCGTGGTGACTTCGTACGAGATGGCCTCGATCGATA
GGAAGCATCTCATGAGGTACCAGTGGCGGTGGCTGGTGGTCGACGAAGGG
CAACGGATCAAGAACCGTAACGGTCGCCTGTTCCACGAACTGAAGGAGAT
TCCCTCCGAATCTCGCCTCCTCCTCTCGGGGACCCCCATCCAGAACTCCC
TCGAGGAGCTATGGACGCTCCTCAATTTCTGCCAGCCGGACATCTTCGAC
AATCTGGGCGTGTTTCGCTCCTGGTTCGGCTTCCAGAACATTGGCAAGGA
CACGACCGTGGACGACATCATCGACGAGGAGCACCGAGAAAGGGTGGTGA
GCAAGCTCCACGAGGTCCTCCGTCCCTTCCTCCTCCGCCGGATGAAGCGG
GATGTCAAGATCGACCTTCCGGAGAAGAAGGAGCTGGTGGTGTATGCACA
CATGTCGGAGATCCAGCACGACTATTACCGGCTGGGCCAGGCGGGGCAAC
TGCGCGAAGCCTTAATGCAGCAGGGGGTCCCGGACGCAGACAAGATCCGG
CAAACAAATCCACAGATGTTGCAGCGTAAGATATGTAATCACCCTTTCCT
CGTCGCCGAGCCAATCACCAGAGACGGTACGCCGATAGGGGAGGCAAATC
CCAAGATCCTGATCGAGGCATGCGGGAAGCTTAAGCTGCTGGATAGGATG
ATGAGGAAGCTGTATGCCCAGGGCCACCGCGTCCTCCTGTTCTCCCAGAT
GACGGAGATGCTGACCCTTTTGGAAGACTACCTGCACTACCGTCGATGGA
AGTACTGCCGCATTGACGGCTCGGTCAAAATCGACGAACGGCAAGAGCAG
ATAGAGGCTTTCAACAAGGACCGGTCCATCTTCTGCTTCCTCCTCTCCAC
GCGTGCCGGTGGACTGGGGATCAACTTGGCTGGGGCGGACACGGTGAGTG
TCTTCCCTCCCTCATTCCCCCCTTCCCTCCTCCCCTCTCCTTTTTTTTCA
AACAAGAACGAGAAATGTAGATGA

Synonyms

Publications