NO04G00640.1, NO04G00640.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G00640.1
Unique Name	NO04G00640.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4277
Alignment location	chr4:224874..230758 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:224874..230758 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G00640.1 vs.
Match: EWM28507.1 (hypothetical protein Naga_100058g18 [Nannochloropsis gaditana])

HSP 1 Score: 790.0 bits (2039), Expect = 4.600e-225
Identity = 410/543 (75.51%), Postives = 458/543 (84.35%), Query Frame = 0

Query:    1 MDDKPSVATASGLSPPSNRGGAASEDSNTSSPSTARQNGGGGSHPSSSSTSTSSGSSS-NHPSSPGGTPVDKAPLVYRSSSGEAASSATGAPGGPRRKRPETAMKKFYNTVKKFTYAFVVAALAIFSYMPFAFQVILGSFGLFIVGLIYLPPPVKHRWEVKFMVAQGWTLRQWFSYLSRHNFAIDPIYWHRALFITVISTFTSFVWEPKEEKEYPEATIRATTIQQPPIFILGHFRSGTTRLHELMSKDERLVAPTVYQCFAPRVFLHREEAISEQFGKLQIRRPMDSVKVRMESPQEDEFGLVNLCGLSPYMGAIFARAERARNRYIQFLSFKEATAEEVGQWKDAVVYFYKKVLFKKQEKRLILKSPAHTARLKLLHELFPEAKFIHISRNPFEVYQSTSKLFMDLLIQWNLQYVDYQGDVRAHPDDDELHRSVLTLFGGMYDSFFQDLDELKLGKDMLTYVKYEDLIRSPVGVLEKIYKDLDIGEFDKVHPRLVEATANDAAFRKNAHPNISADVKKDVRERLSRYFTEFGYEKEYGQTL 543
            M+D   V TASG SP  +RGGAAS++S  S  S    NGGGGSHP  S+   + G  +     S    PVDKAPLVY  + GEA   A GA G  ++KRP TAMKK Y  ++KFT A  +AALAIF YMP   ++I+G F LFI+ LIYLP  VKHRWEVKFMVAQGWTLRQWF YL+RHNF +DPIYWHRALFITVISTFTSFVW PKEEKEYPE TIRATTIQQPP+FILGHFRSGTTRLHELMSKD+R VAPTVYQCFAPRVFLHREEAISEQFGKLQ+RRPMDSVKVRMESPQEDEFGLVNLCGLSPYMGAIFARAER +N Y Q+LSFKEA+ EEV +WKDAVV+FYKKVLFKKQ+KRLILKSPAHTARLKLLHELFP+AKFIHISRNPFEVYQSTSKLFMDLLIQWNLQYVDY GD+++HP+D ELHRS+L L+GG+YDSFFQDLDEL LGKD+LTYVKYEDL+RSPVGV+EKIYKDL +G F+ V   L+EATA D  FR+NAHPNISA+VK DVR RL+RYFTEFGYE E+G ++
Sbjct:    1 MNDGAVVPTASGTSPSYDRGGAASDESKPSDLS----NGGGGSHPLPSAAPPTWGQGNIKEDPSADENPVDKAPLVYYPT-GEADKKA-GA-GSHKKKRPVTAMKKAYIALRKFTVAIGLAALAIFVYMPVILKIIVGLFILFILSLIYLPRSVKHRWEVKFMVAQGWTLRQWFVYLARHNFVVDPIYWHRALFITVISTFTSFVWAPKEEKEYPEETIRATTIQQPPLFILGHFRSGTTRLHELMSKDDRFVAPTVYQCFAPRVFLHREEAISEQFGKLQMRRPMDSVKVRMESPQEDEFGLVNLCGLSPYMGAIFARAERIKNTYFQYLSFKEASTEEVARWKDAVVFFYKKVLFKKQDKRLILKSPAHTARLKLLHELFPDAKFIHISRNPFEVYQSTSKLFMDLLIQWNLQYVDYLGDIQSHPEDTELHRSILQLYGGIYDSFFQDLDELGLGKDVLTYVKYEDLMRSPVGVVEKIYKDLRLGNFENVQQLLLEATAKDGEFRRNAHPNISANVKNDVRTRLARYFTEFGYEPEHGTSV 536

The following BLAST results are available for this feature:

BLAST of NO04G00640.1 vs.

BLAST of NO04G00640.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28507.1	4.600e-225	75.51	hypothetical protein Naga_100058g18 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G00640	NO04G00640	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00640.1	NO04G00640.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00640.1.cds1	NO04G00640.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds2	NO04G00640.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds3	NO04G00640.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds4	NO04G00640.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds5	NO04G00640.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds6	NO04G00640.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds7	NO04G00640.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds8	NO04G00640.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00640.1.cds9	NO04G00640.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:224874..230758-
coding sequence from alignment at chr4:224874..230758-

mRNA sequence

>NO04G00640.1 ID=NO04G00640.1|Name=NO04G00640.1|organism=Nannochloropsis oceanica|type=mRNA|length=4277bp
ACGCAAGTATCACGCGATGGCAGTATTTTTTTACTTTGTTTGAGGGCGGG
ATATTAACAGAACCAGTTTTTTAAATCCGTAGAGGCAGGCAGGATGGTAT
GAAATACAATTCATTTTTCATAGCCTCTTGGGCTTCTTGTGCTTGCTATC
CATGCGTAATGCATGCATTTCCTAGTGACGCGAACGACGCCTTCAAGAGA
ATGAAGGACGGGAGAGGGGAAATCGAGGCAATTACAATCCTTTCGTTTCT
GACCACAAATCCTCTAACGTGCGCACATACCTATGCCAAAAATCACGCTT
GCAGGCTTGCAAGAAGTTGTGTAGTCACGGCCCACAAGCCTTCATTTGCG
TTTGCTTTTCCCGCTTTTCTTCTATTTTCGCTGCAACAGGTTGCGCCCAG
AGAGCAGTCTTCGTCTTCGTCACGTCGCGTTTCCCGGCGACTCGAACAGA
CGACTCGTAGCCTTTCCGCGATGAACGAAGCAGTTCACTGGGTGCTTACG
CGGGCAATTATAATTCTCGTCTGACCAAGGCGCACGTAAGCAGGCTGTAG
CTATTTCTCTTTCATTTTTCCTAGTTCCGGTCGAGAATCGAACTTGACCG
AACCGAACTCTCCCTCCTTCGCCTCCTCTTGTTTGAAAATCGCTCCGAGC
AAACATGTCACCGGGCTGGTGCACGGCGAGTCTTGTGTGCCCCCCCGCTA
TTCGCCTGCGTTCGTGTGTGTGGTGCAGTGCGTGAAGTTGCCTCCATCTA
CATATATAAATGTGGTCTAAGCTTCTCCTTGCGCACATAAAAGATGAAGC
CGCAAAGATGAAGGCCGTAGACACCTCCCCCTTTCTTTCTTCCTTCCTAC
ACAACACCTCAGCAGACGAAGCGCCCCCTTCACCGCCAGACACTGAGGTT
TGCGCACGAATCGCAAAAAATCACTCGCATGATAAAGAGGATGTCCATCT
GTTTGCTGGCAGTGGCACAGGAAAGAGCGCAAAAGGGGTCTGGCCGGCCG
AGGCAGGAAGGCAGGGAGTGATGCCCCGGTCCTCGTTTCTCTTCTTCCTT
GTTTTATGTGTGCGATGGCTTTTCGATGCCCCACAATTCTTCGTGCTCCT
GCGTCATGCTCATTATGTCCTACCAATACACAGGAACATTTGCTTTCTTG
GCGTAAGCGCAGCTTTCCTCGTCCAACTCTCCCTAAACGACCAGCAGTAG
CAACATCATTCGCCGCTGCCGCTTGCCGCCGTCTTGTCAACGAGCATTCC
CCTGCAGGAGCGACCCAAAAGACTGCAGCGTTTAACTGCTTGCCCCCCTT
CTCCACCTAGTCAGGTGATTTTTCTCCCCATAGACGGCTTCCCACGACGG
TTGCCGTATCGACTCATAAAGACGGTGCCCACTAGCCACCCCAGCGCCCC
CAGCGCTCCCAGCCTTAGCCTGGGCAAGATGGACGACAAGCCATCAGTAG
CTACAGCCTCCGGCTTATCTCCGCCTAGCAACCGTGGAGGTGCTGCCAGC
GAGGATAGCAATACGTCCTCTCCCTCCACTGCCCGTCAGAATGGAGGTGG
AGGCAGCCACCCATCCTCCTCCAGCACCTCCACCTCGTCCGGCAGCTCCA
GCAATCACCCAAGCTCTCCAGGTGGCACGCCGGTGGACAAGGCCCCTCTC
GTCTACCGAAGTTCTTCAGGCGAGGCAGCTTCTAGTGCCACTGGCGCCCC
CGGCGGCCCTCGAAGGAAACGACCAGAGACCGCCATGAAGAAATTCTATA
ACACTGTGAAGAAGTTCACGTATGCCTTCGTGGTGGCGGCTTTGGCCATT
TTTTCTTACATGCCTTTCGCCTTCCAAGTAATCCTGGGCTCCTTCGGCCT
CTTCATCGTCGGGCTTATTTACCTCCCCCCCCCGGTCAAACACCGGTGGG
AGGTAAAGTTTATGGTGGCACAAGGCTGGACTCTCCGGCAGTGGTTTAGC
TACCTGTCTCGACATAACTTTGCGATCGACCCCATCTACTGGCACCGGGC
GCTCTTCATCACAGTTATTAGCACCTTCACCTCCTTCGTCTGGGAGCCTA
AGGAAGAAAAAGAGTACCCGGAAGCCACCATCCGAGCCACCACCATCCAG
CAACCCCCCATCTTTATCCTCGGGCACTTCCGTAGCGGCACCACGCGGCT
GCACGAGCTCATGTCCAAGGACGAACGCCTCGTGGCCCCTACGGTCTACC
AGTGCTTCGCACCCCGGGTGTTTCTTCACCGGGAGGAGGCGATCAGCGAA
CAATTCGGGAAACTACAGATCCGGCGGCCCATGGACAGCGTCAAGGTCCG
GATGGAGAGCCCTCAGGAGGACGAATTCGGTTTGGTTAATCTCTGTGGCC
TGTCGCCGTACATGGGCGCCATTTTCGCCCGGGCTGAGAGGGCGAGGAAC
CGTTACATTCAATTTTTGAGTTTCAAAGAGGCAACGGCTGAGGAAGTGGG
GCAGTGGAAGGACGCAGTGGTGTATTTCTACAAGAAGGTTCTGTTCAAGA
AGCAGGAGAAGCGGCTCATTCTCAAGTCCCCCGCCCACACGGCCCGCCTC
AAGCTGCTGCACGAGCTCTTCCCCGAGGCCAAGTTCATCCACATCTCCCG
CAACCCTTTCGAGGTCTACCAGTCCACCAGCAAGCTTTTCATGGACCTTC
TGATCCAGTGGAACCTCCAGTACGTGGATTACCAAGGCGACGTTCGGGCC
CACCCCGACGACGACGAGCTGCACCGCTCCGTCCTGACGCTTTTTGGTGG
GATGTACGATTCTTTCTTTCAAGACCTGGATGAGCTCAAGCTGGGCAAGG
ACATGTTGACGTATGTTAAGTACGAGGACTTAATCCGGTCCCCCGTGGGA
GTGCTGGAGAAGATCTACAAGGACCTTGACATTGGAGAGTTCGACAAGGT
GCATCCCCGGCTGGTGGAGGCCACGGCCAACGATGCGGCCTTCAGAAAAA
ACGCCCACCCGAATATTTCCGCGGACGTCAAGAAAGATGTGCGCGAGCGG
CTCTCTCGCTACTTCACTGAATTCGGGTACGAGAAAGAGTATGGCCAAAC
CCTCTAGAGGGTACGACAAACAACATGGCCAGTTTGTAGAGAAAGAGAGA
GGGATGAAGGAAGGTGGGTACGATAAACAACATGGCTATTCCCCGCAGAG
AAGGAGAGTGGGAGAAGAAGATAGTGTGACGGTCAGACGTGGGAGTGAAA
GGAAGAAGGGAAGAAAGGAAAGAAGGAGGCCACAAGAGAGAAAGAGAGAG
CAACGAAATATTGAAAAGTTGATTGTTTGAATTGTTCATTCATTTATGTA
TTCGTGCATGTGGGGGAATGCGTGTGATTGTGTGGGTGAGGATAAGCACG
CAAGCAAGCTCTAGAAATAGTGGTAAGAGGGACGACGAGGGGCGAAAGAG
AGATAGAAATAGAAGCTGCCGGGTATCTTTGTAGCTGGCACCAACAAAAA
GACAGACAAGGGAGAGAAAGACGGGAGGGAAAGAGGAATGACGATGGTGA
CGACGACGTGGATTTCTCGGGGTAAAGAGGACAAGGTAAACCACCCACAC
GGTGCTGCACGGGGGAGGCGGGAGGGATGAGGCAGGAGGGAGGGAAAAGC
GTTGCACTGGTGGGACTGCAATCGTGTGGAGGACTCACAAGGGGGGGCGA
AACCGAGTTAAAGTCACGGCTACGGCCATTCAATTATCCTGTGTCTCAAC
GTTGTCTGCGCGGCCTTGGGAGAGTTGGAAGATCGGCGAAAAGAACGGTA
AAAGAAAGGGCAGTGAAGGAAAGAGAGTCTTGATGCAGAGCGAGCGATGG
CGGATACAGGAATAGGACGTTCGGCGAGAACGATGAAGAAAAAAGGAAGG
ACTTGAAGAGCGAGATGGAATGAACAAAAAAACAGCACAGAAAGAGGGGT
CAGTGGAATGAGGAGAAGAAGGAAGGAGGGAAGGTACGCAGCTCCAGACA
GGAGGAAGAAGAGGGGAGGATTGGGAGGAGGCCCGAGGAAGCAACGACAA
TTAAACAATGTGTTTCTCCATTAGATCTTATAGTGTGACATTATAGGTCT
ACTAATATACGCAGCGGGGCTAGTTTCAAGGTTTCTCCTCTCCACCCTCT
CCTCTTGTTCCGTCATGCAGCACTTTTTTCGTATCTATTACTCCTTCCTT
GCCTGTCCTCACCTCCGCCGCCGCGCTAGAGAGAAAAAAAGGGGTTCGTA
GCGAGAAAAAGCCGATAAGCAGTAGAATACAAGGAATAGAAGCGACCTCC
GAGACATAGTGGCCACGCTCCCTTATG

protein sequence of NO04G00640.1

>NO04G00640.1-protein ID=NO04G00640.1-protein|Name=NO04G00640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=543bp
MDDKPSVATASGLSPPSNRGGAASEDSNTSSPSTARQNGGGGSHPSSSST
STSSGSSSNHPSSPGGTPVDKAPLVYRSSSGEAASSATGAPGGPRRKRPE
TAMKKFYNTVKKFTYAFVVAALAIFSYMPFAFQVILGSFGLFIVGLIYLP
PPVKHRWEVKFMVAQGWTLRQWFSYLSRHNFAIDPIYWHRALFITVISTF
TSFVWEPKEEKEYPEATIRATTIQQPPIFILGHFRSGTTRLHELMSKDER
LVAPTVYQCFAPRVFLHREEAISEQFGKLQIRRPMDSVKVRMESPQEDEF
GLVNLCGLSPYMGAIFARAERARNRYIQFLSFKEATAEEVGQWKDAVVYF
YKKVLFKKQEKRLILKSPAHTARLKLLHELFPEAKFIHISRNPFEVYQST
SKLFMDLLIQWNLQYVDYQGDVRAHPDDDELHRSVLTLFGGMYDSFFQDL
DELKLGKDMLTYVKYEDLIRSPVGVLEKIYKDLDIGEFDKVHPRLVEATA
NDAAFRKNAHPNISADVKKDVRERLSRYFTEFGYEKEYGQTL*

mRNA from alignment at chr4:224874..230758-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G00640.1 ID=NO04G00640.1|Name=NO04G00640.1|organism=Nannochloropsis oceanica|type=mRNA|length=5885bp|location=Sequence derived from alignment at chr4:224874..230758- (Nannochloropsis oceanica)
ACGCAAGTATCACGCGATGGCAGTATTTTTTTACTTTGTTTGAGGGCGGG
ATATTAACAGAACCAGTTTTTTAAATCCGTAGAGGCAGGCAGGATGGTAT
GAAATACAATTCATTTTTCATAGCCTCTTGGGCTTCTTGTGCTTGCTATC
CATGCGTAATGCATGCATTTCCTAGTGACGCGAACGACGCCTTCAAGAGA
ATGAAGGACGGGAGAGGGGAAATCGAGGCAATTACAATCCTTTCGTTTCT
GACCACAAATCCTCTAACGTGCGCACATACCTATGCCAAAAATCACGCTT
GCAGGCTTGCAAGAAGTTGTGTAGTCACGGCCCACAAGCCTTCATTTGCG
TTTGCTTTTCCCGCTTTTCTTCTATTTTCGCTGCAACAGGTTGCGCCCAG
AGAGCAGTCTTCGTCTTCGTCACGTCGCGTTTCCCGGCGACTCGAACAGA
CGACTCGTAGCCTTTCCGCGATGAACGAAGCAGTTCACTGGGTGCTTACG
CGGGCAATTATAATTCTCGTCTGACCAAGGCGCACGTAAGCAGGCTGTAG
CTATTTCTCTTTCATTTTTCCTAGTTCCGGTCGAGAATCGAACTTGACCG
AACCGAACTCTCCCTCCTTCGCCTCCTCTTGTTTGAAAATCGCTCCGAGC
AAACATGTCACCGGGCTGGTGCACGGCGAGTCTTGTGTGCCCCCCCGCTA
TTCGCCTGCGTTCGTGTGTGTGGTGCAGTGCGTGAAGTTGCCTCCATCTA
CATATATAAATGTGGTCTAAGCTTCTCCTTGCGCACATAAAAGATGAAGC
CGCAAAGATGAAGGCCGTAGACACCTCCCCCTTTCTTTCTTCCTTCCTAC
ACAACACCTCAGCAGACGAAGCGCCCCCTTCACCGCCAGACACTGAGGTT
TGCGCACGAATCGCAAAAAATCACTCGCATGATAAAGAGGATGTCCATCT
GTTTGCTGGCAGTGGCACAGGAAAGAGCGCAAAAGGGGTCTGGCCGGCCG
AGGCAGGAAGGCAGGGAGTGATGCCCCGGTCCTCGTTTCTCTTCTTCCTT
GTTTTATGTGTGCGATGGCTTTTCGATGCCCCACAATTCTTCGTGCTCCT
GCGTCATGCTCATTATGTCCTACCAATACACAGGAACATTTGCTTTCTTG
GCGTAAGCGCAGCTTTCCTCGTCCAACTCTCCCTAAACGACCAGCAGTAG
CAACATCATTCGCCGCTGCCGCTTGCCGCCGTCTTGTCAACGAGCATTCC
CCTGCAGGAGCGACCCAAAAGACTGCAGCGTTTAACTGCTTGCCCCCCTT
CTCCACCTAGTCAGGTGATTTTTCTCCCCATAGACGGCTTCCCACGACGG
TTGCCGTATCGACTCATAAAGACGGTGCCCACTAGCCACCCCAGCGCCCC
CAGCGCTCCCAGCCTTAGCCTGGGCAAGATGGACGACAAGCCATCAGTAG
CTACAGCCTCCGGCTTATCTCCGCCTAGCAACCGTGGAGGTGCTGCCAGC
GAGGATAGCAATACGTCCTCTCCCTCCACTGCCCGTCAGGTAATTTACTT
TATCGATGCACCCACAGCTGAGACGTAGCTGGGGGTGACGGTGAAGGCTT
CTTTGTTCGTTGGCCTTCCTCTTGGCTATTGTGTGAAGTGTCGTATACCA
CTGACTGTAAGACACTCAAATCACTCATGCATCTCTTGCTCCTCCCCTCC
TCCTGTCCCTCCTCACATCCCCCTTCCCCAACACCGCACAGAATGGAGGT
GGAGGCAGCCACCCATCCTCCTCCAGCACCTCCACCTCGTCCGGCAGCTC
CAGCAATCACCCAAGCTCTCCAGGTGGCACGCCGGTGGACAAGGCCCCTC
TCGTCTACCGAAGTTCTTCAGGCGAGGCAGCTTCTAGTGCCACTGGCGCC
CCCGGCGGCCCTCGAAGGAAACGACCAGAGACCGCCATGAAGAAATTCTA
TAACACTGTGAAGAAGTTCACGTATGCCTTCGTGGTGGCGGCTTTGGCCA
TTTTTTCTTACATGTACGATGGAGAAAGAAGAGGATGGGAGGGATTCTTT
GGATGTTGGAGGGAGGGAAGAAGGGAGGGGACCGAGGGAATAGTGTTAGA
GGTGGCTTTGCCTTGTAGTTTGCAAAGGCGGCGCTCTCTCGCTGCCTCCT
TTCCTCCCTCGCCCTCGGATGGCGCGACAACGAATTTCATTTCCTTACAT
TCATCCTCCTCTCCCTTCCCTCCCTCCCTCCCTCCCACCTTCCCTCCCTT
CCTTCCTGTAGGCCTTTCGCCTTCCAAGTAATCCTGGGCTCCTTCGGCCT
CTTCATCGTCGGGCTTATTTACCTCCCCCCCCCGGTCAAACACCGGTGGG
AGGTAAAGTTTATGGTGGCACAAGGCTGGACTCTCCGGCAGTGGTTTAGC
TACCTGTCTCGACATAACTTTGCGATCGACCCCATCTACTGGCACCGGGC
GCTCTTCATCACAGTTATTAGGTTCGCACTACCCTGCCTCCCTCCCTCTT
TCCCTCCCTCCCTCTTTCCCTCCTTCCCTCTTTCCCTCCTGCCCTTCCTG
GCATGCATAGATGTGGGAGAGAGCTACAATCATCTGCGTAGGTCCGCCAT
GAGCTCACTTCCTTTCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTTTAAACAGCACCTTCACCTCCTTCGTCTGGGAGCCTAAGGAAGAAA
AAGAGTACCCGGAAGCCACCATCCGAGCCACCACCATCCAGCAACCCCCC
ATCTTTATCCTCGGGCACTTCCGTAGCGGCACCACGCGGCTGCACGAGCT
CATGTCCAAGGACGAACGCCTCGTGGCCCCTACGGTCTACCAGTGCTTCG
CACCCCGGGTGTTTCTTCACCGGGAGGAGGCGATCAGCGAACAATTCGGG
AAACTACAGATCCGGCGGCCCATGGACAGCGTCAAGGTCCGGATGGAGAG
CCCTCAGGAGGACGAATTCGGTTTGGTTAATCTCTGTGGCCTGTCGCCGT
ACATGGGCGCCATTTTCGCCCGGGCTGAGAGGGCGAGGAACCGTTACATT
CAATTTTTGAGTTTCAAAGAGGCAACGGCTGAGGAAGTGGGGCAGTGGAA
GGACGCAGTGGTGTATTTCTACAAGAAGGTTCTGTTCAAGAAGCAGGAGA
AGCGGCTCATTCTCAAGGTAAGCAGACGGCGTTGAGGAAGGGAGGAAGGG
AAGGAGGGAGGGAGGGCGTTAAAGCTATATCACGCCTTTCCGTATAAATC
CGCATCGCATAGTGATTTGTTTCCCCTCCCTCTTTCCCCCCCTCCCTCCT
CCTCTCCTCCCCTCCCTCTCCCCAGTCCCCCGCCCACACGGCCCGCCTCA
AGCTGCTGCACGAGCTCTTCCCCGAGGCCAAGTTCATCCACATCTCCCGC
AACCCTTTCGAGGTCTACCAGTCCACCAGCAAGCTTTTCATGGACCTTCT
GATCCAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
TTCCCCAGGACGAAGGCTCCAGTACGGTTATTACTGCAGACCACTGAACT
CATCCCTTCCTCCTTCCCTCCCTTCCTCCCTCCCCTCCTTCCCTCCCTCC
CTCCCTCCCTCCAGTGGAACCTCCAGTACGTGGATTACCAAGGCGACGTT
CGGGCCCACCCCGACGACGACGAGCTGCACCGCTCCGTCCTGACGCTTTT
TGGTGGGATGTACGATTCTTTCTTTCAAGGTGAGGAAGGAGGGAAAGAGG
GAGGGAGGGAGAGAGGGAGGGAGGGAAGACGCATGGCCTGTCACGATATC
AACGAGCAGCTCCGCAGCATCTTCGTGCTCTGTGAAGGGGTGTTCGCTCT
ACATCCTTCCCTCCCTCCCTTCCTTGAGAAGTCCCGACATTCAACCCTCC
TTCTCCCTCCCTCCCTCCCTGCCTCCCTCCCTCCCTCCCTAGACCTGGAT
GAGCTCAAGCTGGGCAAGGACATGTTGACGTATGTTAAGTACGAGGACTT
AATCCGGTCCCCCGTGGGAGTGCTGGAGAAGATCTACAAGGTAGGGAGGG
AGGGAGGGAAGGAGGGAGGACCTGGGCTTGGCGGTGGAGAAGGTGGATGG
GGTAGGGAGGGGGGGAGGCAGGGAGGGAGGGAGGGACTAGAAGAGTGATC
ATCGTAAGCATATGCCAACAGGGAGACGCCACTCACTCGTTCCTTGCTCC
CCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAGGACCTTGACATT
GGAGAGTTCGACAAGGTGCATCCCCGGCTGGTGGAGGCCACGGCCAACGA
TGCGGCCTTCAGAAAAAACGCCCACCCGGTACGTGTATAGTCGGGAGGGT
GGGAGGGAGGGAGGGAGGGAGGGAGGTGAGAAGGGGGTGCCAGCCAGCCA
CCTCCTACCTGTGTGGGACAGTCTGATTTTTTAGGGTGTTTCTCGTCCTA
TTGCTTCATCTGTGATTCCACTCACGTCGGCTGCTTTTGTTTATTCGAAA
TCATTGACCTCTCCCTCCCTCCCTCCTCTCTCCCTCCCTCCCACTATTTG
CCATTTCCCTCTCTTTCAGAATATTTCCGCGGACGTCAAGAAAGATGTGC
GCGAGCGGCTCTCTCGCTACTTCACTGAATTCGGGTACGAGAAAGAGTAT
GGCCAAACCCTCTAGAGGGTACGACAAACAACATGGCCAGTTTGTAGAGA
AAGAGAGAGGGATGAAGGAAGGTGGGTACGATAAACAACATGGCTATTCC
CCGCAGAGAAGGAGAGTGGGAGAAGAAGATAGTGTGACGGTCAGACGTGG
GAGTGAAAGGAAGAAGGGAAGAAAGGAAAGAAGGAGGCCACAAGAGAGAA
AGAGAGAGCAACGAAATATTGAAAAGTTGATTGTTTGAATTGTTCATTCA
TTTATGTATTCGTGCATGTGGGGGAATGCGTGTGATTGTGTGGGTGAGGA
TAAGCACGCAAGCAAGCTCTAGAAATAGTGGTAAGAGGGACGACGAGGGG
CGAAAGAGAGATAGAAATAGAAGCTGCCGGGTATCTTTGTAGCTGGCACC
AACAAAAAGACAGACAAGGGAGAGAAAGACGGGAGGGAAAGAGGAATGAC
GATGGTGACGACGACGTGGATTTCTCGGGGTAAAGAGGACAAGGTAAACC
ACCCACACGGTGCTGCACGGGGGAGGCGGGAGGGATGAGGCAGGAGGGAG
GGAAAAGCGTTGCACTGGTGGGACTGCAATCGTGTGGAGGACTCACAAGG
GGGGGCGAAACCGAGTTAAAGTCACGGCTACGGCCATTCAATTATCCTGT
GTCTCAACGTTGTCTGCGCGGCCTTGGGAGAGTTGGAAGATCGGCGAAAA
GAACGGTAAAAGAAAGGGCAGTGAAGGAAAGAGAGTCTTGATGCAGAGCG
AGCGATGGCGGATACAGGAATAGGACGTTCGGCGAGAACGATGAAGAAAA
AAGGAAGGACTTGAAGAGCGAGATGGAATGAACAAAAAAACAGCACAGAA
AGAGGGGTCAGTGGAATGAGGAGAAGAAGGAAGGAGGGAAGGTACGCAGC
TCCAGACAGGAGGAAGAAGAGGGGAGGATTGGGAGGAGGCCCGAGGAAGC
AACGACAATTAAACAATGTGTTTCTCCATTAGATCTTATAGTGTGACATT
ATAGGTCTACTAATATACGCAGCGGGGCTAGTTTCAAGGTTTCTCCTCTC
CACCCTCTCCTCTTGTTCCGTCATGCAGCACTTTTTTCGTATCTATTACT
CCTTCCTTGCCTGTCCTCACCTCCGCCGCCGCGCTAGAGAGAAAAAAAGG
GGTTCGTAGCGAGAAAAAGCCGATAAGCAGTAGAATACAAGGAATAGAAG
CGACCTCCGAGACATAGTGGCCACGCTCCCTTATG

Coding sequence (CDS) from alignment at chr4:224874..230758-

>NO04G00640.1 ID=NO04G00640.1|Name=NO04G00640.1|organism=Nannochloropsis oceanica|type=CDS|length=1629bp|location=Sequence derived from alignment at chr4:224874..230758- (Nannochloropsis oceanica)
ATGGACGACAAGCCATCAGTAGCTACAGCCTCCGGCTTATCTCCGCCTAG
CAACCGTGGAGGTGCTGCCAGCGAGGATAGCAATACGTCCTCTCCCTCCA
CTGCCCGTCAGAATGGAGGTGGAGGCAGCCACCCATCCTCCTCCAGCACC
TCCACCTCGTCCGGCAGCTCCAGCAATCACCCAAGCTCTCCAGGTGGCAC
GCCGGTGGACAAGGCCCCTCTCGTCTACCGAAGTTCTTCAGGCGAGGCAG
CTTCTAGTGCCACTGGCGCCCCCGGCGGCCCTCGAAGGAAACGACCAGAG
ACCGCCATGAAGAAATTCTATAACACTGTGAAGAAGTTCACGTATGCCTT
CGTGGTGGCGGCTTTGGCCATTTTTTCTTACATGCCTTTCGCCTTCCAAG
TAATCCTGGGCTCCTTCGGCCTCTTCATCGTCGGGCTTATTTACCTCCCC
CCCCCGGTCAAACACCGGTGGGAGGTAAAGTTTATGGTGGCACAAGGCTG
GACTCTCCGGCAGTGGTTTAGCTACCTGTCTCGACATAACTTTGCGATCG
ACCCCATCTACTGGCACCGGGCGCTCTTCATCACAGTTATTAGCACCTTC
ACCTCCTTCGTCTGGGAGCCTAAGGAAGAAAAAGAGTACCCGGAAGCCAC
CATCCGAGCCACCACCATCCAGCAACCCCCCATCTTTATCCTCGGGCACT
TCCGTAGCGGCACCACGCGGCTGCACGAGCTCATGTCCAAGGACGAACGC
CTCGTGGCCCCTACGGTCTACCAGTGCTTCGCACCCCGGGTGTTTCTTCA
CCGGGAGGAGGCGATCAGCGAACAATTCGGGAAACTACAGATCCGGCGGC
CCATGGACAGCGTCAAGGTCCGGATGGAGAGCCCTCAGGAGGACGAATTC
GGTTTGGTTAATCTCTGTGGCCTGTCGCCGTACATGGGCGCCATTTTCGC
CCGGGCTGAGAGGGCGAGGAACCGTTACATTCAATTTTTGAGTTTCAAAG
AGGCAACGGCTGAGGAAGTGGGGCAGTGGAAGGACGCAGTGGTGTATTTC
TACAAGAAGGTTCTGTTCAAGAAGCAGGAGAAGCGGCTCATTCTCAAGTC
CCCCGCCCACACGGCCCGCCTCAAGCTGCTGCACGAGCTCTTCCCCGAGG
CCAAGTTCATCCACATCTCCCGCAACCCTTTCGAGGTCTACCAGTCCACC
AGCAAGCTTTTCATGGACCTTCTGATCCAGTGGAACCTCCAGTACGTGGA
TTACCAAGGCGACGTTCGGGCCCACCCCGACGACGACGAGCTGCACCGCT
CCGTCCTGACGCTTTTTGGTGGGATGTACGATTCTTTCTTTCAAGACCTG
GATGAGCTCAAGCTGGGCAAGGACATGTTGACGTATGTTAAGTACGAGGA
CTTAATCCGGTCCCCCGTGGGAGTGCTGGAGAAGATCTACAAGGACCTTG
ACATTGGAGAGTTCGACAAGGTGCATCCCCGGCTGGTGGAGGCCACGGCC
AACGATGCGGCCTTCAGAAAAAACGCCCACCCGAATATTTCCGCGGACGT
CAAGAAAGATGTGCGCGAGCGGCTCTCTCGCTACTTCACTGAATTCGGGT
ACGAGAAAGAGTATGGCCAAACCCTCTAG

Synonyms

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