NO04G00380.1, NO04G00380.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G00380.1
Unique Name	NO04G00380.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2020
Alignment location	chr4:154165..159684 +

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:154165..159684 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G00380.1 vs.
Match: WP_037018399.1 (acyl-CoA synthetase [Rhizobiales bacterium YIM 77505])

HSP 1 Score: 588.6 bits (1516), Expect = 2.300e-164
Identity = 294/542 (54.24%), Postives = 382/542 (70.48%), Query Frame = 0

Query:   63 LQARRANYQPLSPLSFLERTAKLYPRRAAVAYRDETRTWAEENLRIKKLGSSLYKAGVRPGDTVSVMCLNTPPIFEAHFAVPGVRAVLNTLNTRLDAPIIAFQLRHGESKVLITDTEHSAIVEAALQILDKEGVSRPLVVDIVDRHYLGEGKRLGKWEFEEFLAQGDDGFELQGPEDEGDAIALSYTSGTTGDPKGVVTHHRGAYLNSLANIISWRAGMPQHAVFLHIVPMFHCNGWCFPWAITALAGTHVCTRWIRSDLLYEAMDIHRVTHFCGAPILMTLLLNASHEHKRDLHGRNIQFMTAGAPPPPSLLRALKKEVGIDASTAYGLTETYGPITVHVEEHA-DEYPDLEGHALDCQLQWQAPNVGVEEVIVADPDTLLPVPADGETQGEVLVRGNTVMSGYLKNESATEATFAGGWLHTGDIAVAHKNGRIQIKDRLKDIIISGGENISSIEVENALHLHPSIAEVAVVAKPCDKWGEVPCAFISLKDGHVLSEQEAIAFSRQNLAHYKAPKRVIFGPLPKTSTGKVQKYQLRNLAKE 604
            L    AN+QPL+PL+FLER A ++P   A+ +    R + +   R ++L S+L K G++ GDTV+VM  NTP + E H+ VP   AVLNTLNTRLD PIIAF L HGE+KVLITD E+S  ++ AL++       +PLV+D  D  + G G+RLG  E+EEFL +GD GF    P DE DAI+L+YTSGTTGDPKGVV HHRGAYL ++ N+++   GM +H V+L  +PMFHCNGWCFPW+I+ +AGTHVC R++R+  +YEA+  H VTH CGAPI+M+ LLNA  E KR L    +QF TA APPP ++L A+KK  G + +  YGLTETYGP  ++    A +  PD E  A   + +     V +E + V +P+T+ PVPADGET GEV+ RGN VM GYLKN SA+   FAGGW H+GD+ V H +G IQ+KDR KDIIISGGENISSIEVE+AL+ HP++   AVVAKP +KWGE PCAF+ LK   ++S +E I + RQNLA YK PK ++F  LPKTSTGK+QK++LR +A+E
Sbjct:    8 LDRNPANFQPLTPLTFLERAASVFPEHTAIIHGRLRRNYRDFYARARRLASALAKRGIKRGDTVAVMLANTPAMLECHYGVPMTGAVLNTLNTRLDPPIIAFSLDHGEAKVLITDREYSKTIKPALELAKV----KPLVIDYDDPEFTGPGERLGALEYEEFLEEGDPGFAWAMPHDEWDAISLNYTSGTTGDPKGVVYHHRGAYLLAIGNVVT--CGMGKHPVYLWTLPMFHCNGWCFPWSISVVAGTHVCLRYVRAKAMYEALAEHGVTHLCGAPIVMSTLLNAPAEEKRPLP-HTVQFFTAAAPPPEAVLAAMKK-AGFNVTHLYGLTETYGPAVINDWHEAWNALPDSEQAAK--KARQGVRYVPLEALDVMNPETMTPVPADGETLGEVMFRGNVVMKGYLKNPSASAKAFAGGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAVQAAAVVAKPDEKWGETPCAFVELKPSEMVSAEELIGWCRQNLAGYKVPKHIVFTELPKTSTGKIQKFKLREMARE 539

The following BLAST results are available for this feature:

BLAST of NO04G00380.1 vs.

BLAST of NO04G00380.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
WP_037018399.1	2.300e-164	54.24	acyl-CoA synthetase [Rhizobiales bacterium YIM 775...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G00380	NO04G00380	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00380.1	NO04G00380.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00380.1.cds1	NO04G00380.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds2	NO04G00380.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds3	NO04G00380.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds4	NO04G00380.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds5	NO04G00380.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds6	NO04G00380.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds7	NO04G00380.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds8	NO04G00380.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds9	NO04G00380.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds10	NO04G00380.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds11	NO04G00380.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds12	NO04G00380.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds13	NO04G00380.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds14	NO04G00380.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds15	NO04G00380.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds16	NO04G00380.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00380.1.cds17	NO04G00380.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:154165..159684+
coding sequence from alignment at chr4:154165..159684+

mRNA sequence

>NO04G00380.1 ID=NO04G00380.1|Name=NO04G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2020bp
ATGCTGCATGCCTGTCGTGCGCAGGCCTCTATGTTGCTCTTGCCGGCGCG
GCGCGGTGCCGCATCATCTGCATCATCATTCCTCCATCTCGGCAGCAGCG
GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCCACCCCACGTTGCAGCAA
GTGCGCCACAACCACCGGGCGTACGATTCATCGTTTCTCCAGGCCCGCAG
GGCCAACTATCAACCCTTGTCACCTTTGTCGTTCTTGGAACGCACCGCCA
AGCTCTACCCACGTCGGGCGGCAGTGGCGTACCGGGACGAAACCCGGACA
TGGGCAGAGGAGAATCTGCGCATTAAGAAGCTGGGGAGTAGCTTATACAA
GGCGGGTGTGCGCCCCGGCGACACTGTCTCGGTGATGTGCCTTAACACTC
CTCCCATCTTCGAGGCCCACTTCGCGGTTCCGGGCGTCCGCGCCGTGCTG
AACACGCTCAACACCAGGTTGGACGCGCCAATCATCGCGTTTCAGCTCCG
GCATGGGGAGAGCAAGGTCCTCATCACCGACACCGAGCACAGCGCAATCG
TCGAAGCCGCCCTCCAAATCCTGGACAAGGAGGGCGTGTCTCGTCCTCTC
GTGGTGGACATCGTCGATAGGCATTATCTCGGGGAGGGAAAACGACTGGG
AAAGTGGGAGTTTGAAGAGTTTCTGGCGCAGGGCGATGACGGCTTTGAGC
TCCAGGGACCGGAGGACGAGGGCGACGCTATTGCCCTCAGTTACACGAGC
GGTACCACCGGCGACCCCAAGGGGGTGGTCACTCACCACCGTGGTGCATA
TTTAAACAGCCTGGCCAATATCATCAGCTGGAGGGCAGGGATGCCTCAAC
ACGCCGTCTTCCTCCACATCGTGCCCATGTTCCACTGTAACGGCTGGTGC
TTCCCCTGGGCCATCACCGCCCTCGCCGGCACGCACGTCTGCACGCGGTG
GATCCGATCCGATCTTCTCTATGAGGCTATGGACATCCACCGTGTCACCC
ACTTCTGCGGCGCTCCCATCCTTATGACCCTCTTGCTCAACGCCTCCCAC
GAGCATAAGCGAGACCTGCACGGTCGCAACATCCAGTTCATGACCGCCGG
CGCCCCCCCCCCTCCCTCCCTCCTTCGGGCCCTCAAGAAGGAGGTCGGCA
TCGACGCCTCCACCGCTTATGGACTTACCGAGACCTACGGCCCCATCACG
GTCCACGTAGAGGAGCACGCCGATGAATACCCGGACCTTGAAGGTCACGC
CCTCGATTGCCAACTCCAGTGGCAAGCCCCGAACGTGGGGGTGGAGGAGG
TGATTGTGGCCGATCCCGATACTCTCCTTCCTGTTCCCGCCGACGGAGAG
ACTCAAGGCGAGGTCCTCGTGCGTGGCAACACAGTCATGAGCGGATATCT
CAAGAATGAGTCGGCCACTGAAGCCACTTTCGCCGGGGGCTGGCTGCACA
CGGGCGACATCGCGGTGGCGCACAAGAATGGAAGGATCCAGATCAAGGAC
CGACTCAAGGACATCATTATCAGCGGGGGCGAGAACATCAGCTCCATCGA
GGTTGAGAACGCCTTGCACCTCCATCCCTCCATCGCCGAGGTGGCCGTGG
TGGCCAAGCCCTGTGACAAGTGGGGAGAGGTACCCTGCGCCTTCATCTCC
CTCAAAGACGGCCACGTTCTGTCCGAGCAAGAGGCCATTGCCTTCTCCCG
GCAGAACCTCGCCCACTACAAAGCCCCCAAGCGGGTCATCTTCGGCCCGT
TGCCCAAGACGTCCACAGGGAAGGTGCAGAAATACCAGCTGCGAAACCTG
GCAAAAGAAAGCGGCCCTCATTAGAGGGAGGGAGGGAGGGTGGAGGGCAG
GAAAGGTGTTCATAAGGAAATATGCGTAATATGGCGTGTCGTGGTGGACA
AACTAATGAGAAAAAATCAACTTACACATTAATAAAGGAAAGAAGATCGC
TTTTAACGCCGTTTCCCCCCCTACACATTTGGGCTTTCTGTCCTTGTGTT
GTGGCACGCAAAACTTTGCG

protein sequence of NO04G00380.1

>NO04G00380.1-protein ID=NO04G00380.1-protein|Name=NO04G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=608bp
MLHACRAQASMLLLPARRGAASSASSFLHLGSSGSSSSSSSSSSHPTLQQ
VRHNHRAYDSSFLQARRANYQPLSPLSFLERTAKLYPRRAAVAYRDETRT
WAEENLRIKKLGSSLYKAGVRPGDTVSVMCLNTPPIFEAHFAVPGVRAVL
NTLNTRLDAPIIAFQLRHGESKVLITDTEHSAIVEAALQILDKEGVSRPL
VVDIVDRHYLGEGKRLGKWEFEEFLAQGDDGFELQGPEDEGDAIALSYTS
GTTGDPKGVVTHHRGAYLNSLANIISWRAGMPQHAVFLHIVPMFHCNGWC
FPWAITALAGTHVCTRWIRSDLLYEAMDIHRVTHFCGAPILMTLLLNASH
EHKRDLHGRNIQFMTAGAPPPPSLLRALKKEVGIDASTAYGLTETYGPIT
VHVEEHADEYPDLEGHALDCQLQWQAPNVGVEEVIVADPDTLLPVPADGE
TQGEVLVRGNTVMSGYLKNESATEATFAGGWLHTGDIAVAHKNGRIQIKD
RLKDIIISGGENISSIEVENALHLHPSIAEVAVVAKPCDKWGEVPCAFIS
LKDGHVLSEQEAIAFSRQNLAHYKAPKRVIFGPLPKTSTGKVQKYQLRNL
AKESGPH*

mRNA from alignment at chr4:154165..159684+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G00380.1 ID=NO04G00380.1|Name=NO04G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=5520bp|location=Sequence derived from alignment at chr4:154165..159684+ (Nannochloropsis oceanica)
ATGCTGCATGCCTGTCGTGCGCAGGCCTCTATGTTGCTCTTGCCGGCGCG
GCGCGGTGCCGCATCATCTGCATCATCATTCCTCCATCTCGGCAGCAGCG
GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCCACCCCACGTTGCAGCAA
GTGCGCCACAACCACCGGGCGTACGATTCATCGTTTCTCCAGGTATGTGA
CTGTCGGTGTTGGGCAGGATGTACGTTTCGAGATGCAGCCGTTGTGTGAT
TGTGAGTGAATCTCTGCGTGTCGCCTCACCCCTTCCATGTCTTCTCATTT
CTCTCCATTTCCCGTCCCCTTCTCCACAAAACACACAACAGGCCCGCAGG
GCCAACTATCAACCCTTGTCACCTTTGTCGTTCTTGGAACGCACCGCCAA
GCTCTACCCACGTCGGGCGGCAGTGGCGTACCGGTAGGGAAGCAGGGAGG
GAGGAAGGCGGTAGAAGCAAGCGGGTCCTTAAGCATAGATCGTACCGCAT
TTCACATACACGAAATTCATCTTCTAAATTTAGGGACGAAACCCGGACAT
GGGCAGAGGAGAATCTGCGCATTAAGAAGCTGGGGAGTAGCTTATACAAG
GCGGGTGTGCGCCCCGGTACGTGGCATGTCCTGTTCCCCCGTCGTTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTTCCTCCCTCCCTCCCTCCCTCGACTGAAAGTGCTTGCATTCCCT
TCCATCCTTTCACCGTCCTTTCTCCCCACTGCCCTTCTTGACAGGCGACA
CTGTCTCGGTGATGTGCCTTAACACTCCTCCCATCTTCGAGGCCCACTTC
GCGGTTCCGGGCGTCCGCGCCGTGCTGAACACGCTCAACACCAGGTACCC
GGATGTAAAGAAGGGAAGGAGGGAGGGAGGGAGGGAGGATGCGAAAATAC
GAATGGCTGGAGTACAATACGTACTGCTAAACGTTAAGGTTCTCGAGCAC
TCTATCATTATTAACTTTTGGGCCATAACAGGTTGGACGCGCCAATCATC
GCGTTTCAGCTCCGGCATGGGGAGAGCAAGGTGAGCCTTCATGTCCCCCC
ATGAGCTCTCTCTTTATCTCTCTATCTCTTTCTCTCTCTCTCTGTCTGTC
TCTCTCTATCTCTTTTTTTTCTTTCTCTCTCTCTCTCTCTCTTTTTTTCT
TTCTCTTTTTCTTTCTCTTTTCCTTTCTCTTTTCCTTTCTCTTTCTCTCT
TTCTTTCCCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACTG
TGCCTACCTTTTTTTGGTGATTATGCTGACGGAAGTGCAAAAAGACACTA
GAAGTCTCCTCCTCCTCTCGACATCTCCTGCCTCCTCCGTTGGGGACGCA
GCCATCTCAGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGTCCTCAT
CACCGACACCGAGCACAGCGCAATCGTCGAAGCCGCCCTCCAAATCCTGG
ACAAGGAGGGCGTGTCTCGTCCTCTCGTGGTGGACATCGTCGATAGGCAT
TATCTCGGGGAGGGAAAACGACTGGGAAAGGTCCGGAAGGAGGGAGAGTG
GGCATAGAGGAGGATCGACCGTCCGTCCAACCCCTCCCTCCTCCCCCCCC
CCCCCCATCTGGGTCCACAGTGGGAGTTTGAAGAGTTTCTGGCGCAGGGC
GATGACGGCTTTGAGCTCCAGGGACCGGAGGACGAGGGCGACGCTATTGC
CCTCAGTTACACGAGCGGTACCACCGGCGACCCCAAGGTATTCCCTCCCT
CCCTCCCTCCCTCCCTCCTTGTCCTCACTCGAAAACACTTGCTCAGATGC
GCGTCTTACCTCTTCCTCCGTCTCTCCTCCTTGCTCTTCCCCCCATCCCC
CCCTCAGGGGGTGGTCACTCACCACCGTGGTGCATATTTAAACAGCCTGG
CCAATATCATCAGCTGGAGGGCAGGGATGCCTCAACACGCCGTCTTCCTC
CACATCGTGCCCATGTTCCACTGTAACGGCTGGTGCTTCCCGTGAGTATT
TCTTCCCTCCCTCTCTCCCTCCCTCTCAACCCAGGCAGACTTCGGGATGT
ACGGGGGTCCACAACGACTCACCTCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCCCCCCCATCCCACAGCTGGGCCATCACCGCCCTCGCCG
GCACGCACGTCTGCACGCGGTGGATCCGATCCGATCTTCTCTATGAGGCT
ATGGACATCCACCGTGTCACCCACTTCTGCGGCGCTCCCATCCTTATGAC
CCTCTTGCTCAACGCCTCCCACGAGCATAAGCGAGGTAAAAATGCATCCT
TGCAGTAGAGCCCTCCCTCCTCCCTTCCCTCCCTTTTCCCCCATTCTAGA
CGTGGGCTTGACTCGACGGCTCCTCTCCCCTCCACTTGACCTAATGCCCT
TTGTTCTTGGCATTCACCTTCTCCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTTTAGACCTGCACGGTCGCAACATCCAGTTCATGACCG
CCGGCGCCCCCCCCCCTCCCTCCCTCCTTCGGGCCCTCAAGAAGGAGGTC
GGCATCGACGCCTCCACCGCTTATGGACTTACGTAAGAAGTCGACCAGGA
AGGGAGGGAGGAAGGGAGGGAGAGAGAGAGAGGAAAGAAAGGGAAGGACG
CCACATGAGCTTCGAGCGAGATGTATTCATAGTGATATATGTAGATGTTA
CTATATGTACACACTAGATATGTGTATGTGTAGATAGTAATATATGTAGA
TGTTGCTATATGTGCATCTAGTAGGTGTATGTATTCATAGTGATATATGT
AGATGTTACTATATGTACTTACTAGATATGTGTATGTGTAGATAGTAATA
TATGTAGATGTTGCTATATGTGCATCTAGTAGGTGTATGTATACATAGTG
ATATATGTAGATGTTGCTATATGTGCATCTAGTAGGTGTATGTATATATA
GTGATATATGTAGATGTTGCTATATGTGCATCTAGTAGGTGTATGTATAC
ATAGTGATATATGTAGATGTTGCTATATGTGCATCTAGTAGGTGTATGTA
TACATAGTGATATATGTAGATGTTGCTATATGTGCATCTAGTAGGTGTAT
GTATACATAGTGATATATGTAGATGTTACTATATGTGCATCTAGTAGGTG
TATGTATACATAGTGATATATGTAGATGTTACTATATGTGCATCTAGTAG
GTGTATGTATACATAGTGATATATGTAGATGTTACTATATGTGCATCCAG
TAGGTGTATGTATACACAGTGATATATGTAGATGTTACTATATGTACTTA
CTAGATATGTGTATGTATACATAGTGATATATGTAGATGTTGCTATATGT
GCATCTAGTAGGTGTATGTGTAGATAGTGATATATGTAGATGTTGCTATA
TGTGCATCTAGTAGGTGTATGTATACATAGTGATATATGTAGATGTTGCT
ATATGTGCATCTAGTAGGTGTATGTATACATAGTGATATATGTAGATGTT
ACTAGATATGTATATACTAGATATGTATATAGTATAGTATTGCTACATAA
AAGTCAACATCCATCCCTCCATAACCTTCATTCACCCTCTCACTTCCCTC
CCTCCCTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCAGCGAGACCTACGG
CCCCATCACGGTCCACGTAGAGGAGCACGCCGATGAATACCCGGACCTTG
AAGGTCACGCCCTCGATTGCCAACTCCAGGTACGACAAAGACCTCCTTTC
CTCCCTCCCTCCCTCCCTCTCTCTTCCTCCTGTAACTATCGCTTGGACCT
CCCTTCATCCATCCCTCCCTCCCTCCCTCCTTGGGCAGTGGCAAGCCCCG
AACGTGGGGGTGGAGGAGGTGATTGTGGCCGATCCCGATACTCTCCTTCC
TGTTCCCGCCGACGGAGAGACTCAAGGCGAGGTGCGTTGATTGCTAAGGC
ACTACTTTCTCCCTCTCCCCTTCCTCTTTTCCTCCCTTACTTCCTCCAGC
CTTCCCTCCTTTTCTCCCTCGCTTGATGCATAAAACACCTTCATACTCAC
CGATCCTCCTTCCTCCTTCTCTCCCTCCCTTCTATCCCCCCCCCGTAGGT
CCTCGTGCGTGGCAACACAGTCATGAGCGGATATCTCAAGAATGAGTCGG
CCACTGAAGCCACTTTCGCCGGGGGCTGGCTGCACACGGGCGACATCGCG
GTGGCGCACAAGAATGGAAGGATCCAGATCAAGGTGAGGAAAACTGAAAT
GGGACGCAGGGAGGGGGAGAAGAGGGAGGAGGGCGAGAGCGACAGACATT
AAGTGTGGCTCTGTGCTTCACGTGCTTCACGCTCTACCGACAGGACCGAC
TCAAGGACATCATTATCAGCGGGGGCGAGAACATCAGCTCCATCGAGGTA
GGTACATACACATGGTCTGAGTCCCGGCCCCTATATCTTCTCCTCCCCCA
TTATTATATTATGAACAATATGTCCATTCTTCCATATTATATCATACCCT
ACCCCATCATCGTGTTATATGTTATATGTAACCGTCTCTATTCCCCCTCA
TCCTCTCCTCCCGGCTCACCTTCCCTCCCCCCCCCTCATCCCTCCTTCCC
TCCCATTGGATGACAGGTTGAGAACGCCTTGCACCTCCATCCCTCCATCG
CCGAGGTGGCCGTGGTGGCCAAGCCCTGTGACAAGTGGGGAGAGGTGCGT
CTTATGTCCCTCCCTCTTCAATGTCACCGCTTTTCTCCCCTTTCCCCCTC
TTGCATTCCGGCTTCTCCTCCTTCTCCTCTTCTCTCTCTTATCCCTATCC
CCAGTCCTCTCTCCACCCTTTCTCCCCATACTCTTCTCTCACTCTCTCTC
ACGTCCTGCTGTCAAACCCTCTCCCTCCGCCTTCAGGTACCCTGCGCCTT
CATCTCCCTCAAAGACGGCCACGTTCTGTCCGAGCAAGAGGCCATTGCCT
TCTCCCGGCAGAACCTCGCCCACTACAAAGCCCCCAAGGTAGGTTGTATG
ATATTCTTTAAGCCGTCTACTTGTGCCCTCCTCGTCCTTTTTCCTCCCTG
CTCTCCCTTACTCTCACTCGAATGATCTTCTTCTTGCCCTCCCTTGCGTC
CCCCTATTCTTCCATTGGATGTTCCCTCTCATTCACGTACCATCCCCCCC
ACCCTCCGTCCTTTTCCCTCCTCTGGCACAGCGGGTCATCTTCGGCCCGT
TGCCCAAGACGTCCACAGGGAAGGTGCAGAAATACCAGCTGCGAAACCTG
GCAAAAGAAAGCGGCCCTCATTAGAGGGAGGGAGGGAGGGTGGAGGGCAG
GAAAGGTGTTCATAAGGAAATATGCGTAATATGGCGTGTCGTGGTGGACA
AACTAATGAGAAAAAATCAACTTACACATTAATAAAGGAAAGAAGATCGC
TTTTAACGCCGTTTCCCCCCCTACACATTTGGGCTTTCTGTCCTTGTGTT
GTGGCACGCAAAACTTTGCG

Coding sequence (CDS) from alignment at chr4:154165..159684+

>NO04G00380.1 ID=NO04G00380.1|Name=NO04G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=1824bp|location=Sequence derived from alignment at chr4:154165..159684+ (Nannochloropsis oceanica)
ATGCTGCATGCCTGTCGTGCGCAGGCCTCTATGTTGCTCTTGCCGGCGCG
GCGCGGTGCCGCATCATCTGCATCATCATTCCTCCATCTCGGCAGCAGCG
GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCCACCCCACGTTGCAGCAA
GTGCGCCACAACCACCGGGCGTACGATTCATCGTTTCTCCAGGCCCGCAG
GGCCAACTATCAACCCTTGTCACCTTTGTCGTTCTTGGAACGCACCGCCA
AGCTCTACCCACGTCGGGCGGCAGTGGCGTACCGGGACGAAACCCGGACA
TGGGCAGAGGAGAATCTGCGCATTAAGAAGCTGGGGAGTAGCTTATACAA
GGCGGGTGTGCGCCCCGGCGACACTGTCTCGGTGATGTGCCTTAACACTC
CTCCCATCTTCGAGGCCCACTTCGCGGTTCCGGGCGTCCGCGCCGTGCTG
AACACGCTCAACACCAGGTTGGACGCGCCAATCATCGCGTTTCAGCTCCG
GCATGGGGAGAGCAAGGTCCTCATCACCGACACCGAGCACAGCGCAATCG
TCGAAGCCGCCCTCCAAATCCTGGACAAGGAGGGCGTGTCTCGTCCTCTC
GTGGTGGACATCGTCGATAGGCATTATCTCGGGGAGGGAAAACGACTGGG
AAAGTGGGAGTTTGAAGAGTTTCTGGCGCAGGGCGATGACGGCTTTGAGC
TCCAGGGACCGGAGGACGAGGGCGACGCTATTGCCCTCAGTTACACGAGC
GGTACCACCGGCGACCCCAAGGGGGTGGTCACTCACCACCGTGGTGCATA
TTTAAACAGCCTGGCCAATATCATCAGCTGGAGGGCAGGGATGCCTCAAC
ACGCCGTCTTCCTCCACATCGTGCCCATGTTCCACTGTAACGGCTGGTGC
TTCCCCTGGGCCATCACCGCCCTCGCCGGCACGCACGTCTGCACGCGGTG
GATCCGATCCGATCTTCTCTATGAGGCTATGGACATCCACCGTGTCACCC
ACTTCTGCGGCGCTCCCATCCTTATGACCCTCTTGCTCAACGCCTCCCAC
GAGCATAAGCGAGACCTGCACGGTCGCAACATCCAGTTCATGACCGCCGG
CGCCCCCCCCCCTCCCTCCCTCCTTCGGGCCCTCAAGAAGGAGGTCGGCA
TCGACGCCTCCACCGCTTATGGACTTACCGAGACCTACGGCCCCATCACG
GTCCACGTAGAGGAGCACGCCGATGAATACCCGGACCTTGAAGGTCACGC
CCTCGATTGCCAACTCCAGTGGCAAGCCCCGAACGTGGGGGTGGAGGAGG
TGATTGTGGCCGATCCCGATACTCTCCTTCCTGTTCCCGCCGACGGAGAG
ACTCAAGGCGAGGTCCTCGTGCGTGGCAACACAGTCATGAGCGGATATCT
CAAGAATGAGTCGGCCACTGAAGCCACTTTCGCCGGGGGCTGGCTGCACA
CGGGCGACATCGCGGTGGCGCACAAGAATGGAAGGATCCAGATCAAGGAC
CGACTCAAGGACATCATTATCAGCGGGGGCGAGAACATCAGCTCCATCGA
GGTTGAGAACGCCTTGCACCTCCATCCCTCCATCGCCGAGGTGGCCGTGG
TGGCCAAGCCCTGTGACAAGTGGGGAGAGGTACCCTGCGCCTTCATCTCC
CTCAAAGACGGCCACGTTCTGTCCGAGCAAGAGGCCATTGCCTTCTCCCG
GCAGAACCTCGCCCACTACAAAGCCCCCAAGCGGGTCATCTTCGGCCCGT
TGCCCAAGACGTCCACAGGGAAGGTGCAGAAATACCAGCTGCGAAACCTG
GCAAAAGAAAGCGGCCCTCATTAG

Synonyms

Publications