NO04G00290.1, NO04G00290.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G00290.1
Unique Name	NO04G00290.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3985
Alignment location	chr4:127609..134843 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:127609..134843 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G00290.1 vs.
Match: EWM28431.1 (oxidation resistance protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 431.0 bits (1107), Expect = 1.000e-116
Identity = 220/290 (75.86%), Postives = 241/290 (83.10%), Query Frame = 0

Query:  730 MSLIDVWGLWPALCVCLTMLYFWMYIFDRYYKRRWPRQPRGGSAGGTVREKGAKKYGGEGRGRKGRARLDTEEEEAELELLAIQGDNS----PSLLPTTGHDARDLDSFAGFRPFPSLSEASTILSKAHIKQILPCLPERDAVRKWIKVYCMSRDGASLGTLLYKVMSTERKLTSFLIVIEDSWGYIFGGYCPCPLQNATGYYGTGESFVFKFHPQFTPYKWTGKNDYFILSNAQHLAMGGGSGFAFQLDDELDTGVSGPSDTFGNTRLSSRHVFKCLSIEVWAFGEMND 1016
            MSLID  GLWP  CVCL  LYFWM+IFDRYYKRRWP Q RGG  GG  +E G K+   +GR R GR RLDTEEEEAELELL I    +    PS LP +  D+ + D F   RP PSLSE STILSKAHIK+++  LPERDA+RKW+KVYCMSRDGASL TLLYKVM+ ERKL+SFL+VIEDSWGY+FGGYCPCP QNATGYYGTGESFVFKFHPQFT YKWTGKNDYFILSNAQHLAMGGG GFAFQLDDELDTGVSGPSDT+GNTRLSSRHVFKCLSIEVW FG+++D
Sbjct:    1 MSLIDAVGLWPTFCVCLGTLYFWMWIFDRYYKRRWPHQMRGGREGG--KEGGKKRLYEKGR-RGGRGRLDTEEEEAELELLGINKPPASFPPPSSLPPS--DSTE-DPFPP-RPLPSLSEPSTILSKAHIKRLVASLPERDAMRKWVKVYCMSRDGASLSTLLYKVMA-ERKLSSFLLVIEDSWGYVFGGYCPCPFQNATGYYGTGESFVFKFHPQFTLYKWTGKNDYFILSNAQHLAMGGGGGFAFQLDDELDTGVSGPSDTYGNTRLSSRHVFKCLSIEVWGFGDIHD 282

The following BLAST results are available for this feature:

BLAST of NO04G00290.1 vs.

BLAST of NO04G00290.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28431.1	1.000e-116	75.86	oxidation resistance protein 1 [Nannochloropsis ga...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G00290	NO04G00290	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00290.1	NO04G00290.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00290.1.cds1	NO04G00290.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds2	NO04G00290.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds3	NO04G00290.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds4	NO04G00290.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds5	NO04G00290.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds6	NO04G00290.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds7	NO04G00290.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds8	NO04G00290.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds9	NO04G00290.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds10	NO04G00290.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds11	NO04G00290.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds12	NO04G00290.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds13	NO04G00290.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds14	NO04G00290.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds15	NO04G00290.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds16	NO04G00290.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds17	NO04G00290.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds18	NO04G00290.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds19	NO04G00290.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds20	NO04G00290.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00290.1.cds21	NO04G00290.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:127609..134843-
coding sequence from alignment at chr4:127609..134843-

mRNA sequence

>NO04G00290.1 ID=NO04G00290.1|Name=NO04G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=3985bp
ATAGGCAGAGCTAGTTGTGAGAGCCAAAGTCAACCAGCATTGCCTATTTA
TTGGGCCAGATAATTGCAGGCACGAAAAATAAACATTGGACAATTTTATG
CAGCACATTTATCAAAGGGTGAGGGCCACGGGATGACCAAATTTGCAGAT
TACAACCATGCTTTGTGTTGTGCCTGTGCCCCATATCTCACCTCCCACGA
ATCAACCGGTCACATTCAGTCGTTGCCTTCGATCACATTTTCCAGTTCAT
CGCAACCCACACAAAAACAAAATCCAATAGAGGAGCCACAAAAAATAATG
TTCATGCAACAAAGCCTGTGTGAAGAAGCAAGGCGTCGCCTCCACCACCC
TATAGACGCCAGCGTAGGTCCTGGGGCCCATTCTCGCCTGCATTACATCC
TTCCAGTCTGCCTTGTTCGAAGAGCTAGACATGGACGCCGCTCTCACCAC
CCTAGCCTTTTCTTCAGAGACGTCGATGTTCGACAACCATTTCCTTATAT
ACCGCGTGGCCCCAACACAAGCAAGCTTTAGATAGGAGGGGAAAGTCGGC
CATGGCAGCTGCGGCTTTGTGATGGTGTAATTTATTGAACATGGAAACTG
ACTGGAGATTTCCCCACGGTGATATTTATTAAGTCGTTACTACCAAAATT
TGTTCATAACAACCACTTGCCAATTTCTGGCATGTTTTATAACTTATACT
TTTGTAAACCGAATCGGAGACCAATGTGGAATGACGAGCTTTTCGCGCTG
CGGTGGCTGCTGCAAGAAGCATTTCACATTCCAATTTGCATTCCACACAC
CAGTAGAAGGACACGGCAAGGAGAAATACTTTGGGAGGATAAAATTAAGG
GAGGTCTGGAAGGATAAGAAAAAAAAAGAGGTTAGAAGACTGGTGCTGCA
GCTCAATCACGAAAATCGCCAGTTGTTCTTCAGCGACGAATGGCCTCAGA
AGACGGGACACTGCATTGCTCCACCACTCAAGCCCACTCCATTTCCCTCT
TCACCCTCCTCCCTCACCAGGCTTTGTACTCATACTCGAGCAGTGGTGTC
TTCTTTCCTCCATTCCGTTCTCCATTTACTAAGCGCGCAAGAAGGCGGGG
AGCGAAAGCTCAACGCCATCATCGTGATGGCGGAGGCAGCGTCTACACCC
GGGAGCGATTTGCCCATCTCGGACCAGACGTCCAAGGAAGAGTCCCTTCG
AGAGATGGGGGAGTGGGCGGCCCGGTACGAGATGATAGCTGCCATGGGTT
ACTTGGCCGCGCTATTGATGGTAGGCAAGGCCTTACACAACTTGGGAAAG
ATTGCAAAGTTCCGGTTCACCCCTCCCTCCGCCGTTATCTCGGGTTTTCT
GGGCTTGGGTCTCTATGACATCATGGGGGCTTGCTCGAAGCTCCTGCAGG
TGGAGCTGGAGTCTAGCTTGCGGTCGATTGAAGTGAACATCGTCAACTTC
GTCTTCACATCCCTCATCTTGGGCTTCACCAGCGGAACCAAGAAAACTAA
GATGACCTACAAGAGGATCTTCGGCCTGATTTTCCACGAGGGCATGCCTA
TGCTCCTCTACGCACAGGCGCTCATTTGGGGCAATTCGGTGGTGGCGCTT
CTCATCACAGGCATCTACCGTCTCTGGAACCATGACATATCAGCCTATGA
AGGCGGTCTCGTCACCCTCGGCCTGGAAGCCGGGCGTGACATCCTCCCTT
CCCGCATCAAGTTCAAGGAAGAGTCTCTCGCCGTCGTGCACATGGCGGAC
TCGGCCGGCCTGACCATCTCCATCCTGGTCGGCGTCATCCTCGTCGCCTG
CCGCAGGGTCTCGCCCAACAGGAAAGAGGAATGGTTCGGCATCGGCAGCT
GGCGGAAAGAACGAGGCGGGCAGGGCCCTCTGACAAATCGCGAGCACTTC
CAGCGCCATGTGGGAGGGGGGGAAGGAGGGATGCACCTCCTCCCCCCTCC
TGGGCGGGCACTTCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GAGGAGGGGCGCAGGAAGGGAGGAGGGGGAGGAGGATGGAGGAGGAGGAG
GTGGAGTTGGAGGAGGGGAGGGCAACTCCGTCCTTCGGTCCTTCCTCCTC
TTCGGTGAGCAAGAGGACGAAGTCCATCGACACGCAGCAGCAGGAGGGGC
AGGAGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGCAGCAGCAGCATAAG
AAGAAGGTCTCTGCCCTATCCATCCTCCCCTCGCCATCGAGTGGGGCTGG
CAGGAGGGGAGGGAGGAAGGGGAAGAGGCCTCGGGCTCTTCCAGGTGTGC
AGCAGCAGCAGCAGCAGGAGGGAGGGGCCACTCCCTCCGCGGGAGAAGAC
GCGGCGCTGGGCTCTCACATCGCTCTCATCGCCCTGTCGGTGTTTCTCGG
TTACCTCTTGAACTTATCCCTGAAGTACCTCGAGCTGAACCGTCCATTCC
TCCGCAATCACCACCTCATCTCGGGCATTCGCCTCTTCAAGATCTGCATG
GTGGCAGCGGTCGTGTGTGTCACCACCATCCGATCCCTGTCGAGCCTGAG
GTTCAAACCCGACTGGTTCCACCGCCTGGCCGGCTTTAGTTTAGACCTGA
TGGCCATTGCTGCCATTTCCTCGCAGCGTTTCGACTATTACAAGCAGGTG
GATAATATGGAGCTGGTGGTGCTGATCATTTTGGGCTGCGTGCTGTGGAA
CCTGTTGGCCTTCTTCGCCTTCGCCAAGCGCATGTTCCCCAATTTCTGGT
ACGCTCGTGGTGTCACCCTCATGGGAGATGCCCTCGGCCACAGCTGGGTG
GGCCTGCTGCTGGCCCGGGCCATCGACCCCGCGCTCCAGACGCCCGTGCC
TTTGGCCTTCACCTACAAGCTACTGGTGTTTGTCGTCCCCGGCTCGGGCG
GCAAGAACAACATCGTGATGAGCTTGATCGACGTCTGGGGTCTCTGGCCC
GCCTTGTGTGTGTGCCTTACCATGCTGTACTTCTGGATGTACATCTTCGA
CCGATACTACAAGCGGAGATGGCCTCGCCAACCACGAGGAGGCAGTGCAG
GAGGCACGGTACGGGAAAAAGGCGCGAAGAAATACGGTGGCGAGGGACGA
GGAAGGAAGGGAAGGGCCCGTCTGGACACAGAGGAAGAAGAGGCGGAGCT
GGAACTGCTGGCCATCCAGGGCGATAACTCGCCCTCCCTCCTCCCTACCA
CCGGCCACGATGCCCGCGACCTCGACTCTTTCGCAGGCTTCCGGCCCTTC
CCCTCCCTCTCGGAAGCCTCGACCATTTTGTCCAAGGCCCACATAAAGCA
GATATTGCCGTGCCTGCCGGAGAGAGACGCGGTGCGAAAGTGGATCAAAG
TTTACTGTATGTCCCGCGACGGGGCCAGCCTCGGCACACTCCTTTACAAG
GTCATGTCGACGGAGCGGAAGCTGACGTCCTTCCTGATCGTTATTGAGGA
CTCTTGGGGTTACATTTTCGGAGGCTACTGCCCTTGTCCTCTCCAGAACG
CCACTGGCTATTACGGCACGGGCGAGAGCTTCGTGTTCAAGTTCCACCCT
CAATTCACCCCCTACAAGTGGACGGGCAAGAACGATTACTTCATCCTCTC
CAACGCCCAACACCTCGCCATGGGCGGAGGCAGCGGCTTTGCCTTCCAAC
TTGACGATGAACTAGACACAGGGGTGAGCGGGCCCTCAGACACGTTCGGG
AACACTCGTCTGTCCTCCCGGCATGTCTTCAAATGCCTCTCTATTGAAGT
ATGGGCCTTCGGGGAAATGAACGATTGAGGGAGGGACGGGTGGGGAAGGA
GGGAAGGCAAAAAGCAGCAGCAGCACGAAAAAGACACGAATGTAAAGATG
ACGACCATCGACCCTCAAAAAGTATTGAGGCCAAAAATCAGTATAAAGGA
ATCAAACGACAGACAAGCGTTCTAGAAAATTCTAGAAGATAAAGACTGGA
CGAGAAAACGATGGGAAAGAGAAGCCAAGACAAAT

protein sequence of NO04G00290.1

>NO04G00290.1-protein ID=NO04G00290.1-protein|Name=NO04G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1016bp
MTSFSRCGGCCKKHFTFQFAFHTPVEGHGKEKYFGRIKLREVWKDKKKKE
VRRLVLQLNHENRQLFFSDEWPQKTGHCIAPPLKPTPFPSSPSSLTRLCT
HTRAVVSSFLHSVLHLLSAQEGGERKLNAIIVMAEAASTPGSDLPISDQT
SKEESLREMGEWAARYEMIAAMGYLAALLMVGKALHNLGKIAKFRFTPPS
AVISGFLGLGLYDIMGACSKLLQVELESSLRSIEVNIVNFVFTSLILGFT
SGTKKTKMTYKRIFGLIFHEGMPMLLYAQALIWGNSVVALLITGIYRLWN
HDISAYEGGLVTLGLEAGRDILPSRIKFKEESLAVVHMADSAGLTISILV
GVILVACRRVSPNRKEEWFGIGSWRKERGGQGPLTNREHFQRHVGGGEGG
MHLLPPPGRALREEEEEEEEEEEGGGAQEGRRGRRMEEEEVELEEGRATP
SFGPSSSSVSKRTKSIDTQQQEGQEQQQQQQQEQEQQQHKKKVSALSILP
SPSSGAGRRGGRKGKRPRALPGVQQQQQQEGGATPSAGEDAALGSHIALI
ALSVFLGYLLNLSLKYLELNRPFLRNHHLISGIRLFKICMVAAVVCVTTI
RSLSSLRFKPDWFHRLAGFSLDLMAIAAISSQRFDYYKQVDNMELVVLII
LGCVLWNLLAFFAFAKRMFPNFWYARGVTLMGDALGHSWVGLLLARAIDP
ALQTPVPLAFTYKLLVFVVPGSGGKNNIVMSLIDVWGLWPALCVCLTMLY
FWMYIFDRYYKRRWPRQPRGGSAGGTVREKGAKKYGGEGRGRKGRARLDT
EEEEAELELLAIQGDNSPSLLPTTGHDARDLDSFAGFRPFPSLSEASTIL
SKAHIKQILPCLPERDAVRKWIKVYCMSRDGASLGTLLYKVMSTERKLTS
FLIVIEDSWGYIFGGYCPCPLQNATGYYGTGESFVFKFHPQFTPYKWTGK
NDYFILSNAQHLAMGGGSGFAFQLDDELDTGVSGPSDTFGNTRLSSRHVF
KCLSIEVWAFGEMND*

mRNA from alignment at chr4:127609..134843-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G00290.1 ID=NO04G00290.1|Name=NO04G00290.1|organism=Nannochloropsis oceanica|type=mRNA|length=7235bp|location=Sequence derived from alignment at chr4:127609..134843- (Nannochloropsis oceanica)
ATAGGCAGAGCTAGTTGTGAGAGCCAAAGTCAACCAGCATTGCCTATTTA
TTGGGCCAGATAATTGCAGGCACGAAAAATAAACATTGGACAATTTTATG
CAGCACATTTATCAAAGGGTGAGGGCCACGGGATGACCAAATTTGCAGAT
TACAACCATGCTTTGTGTTGTGCCTGTGCCCCATATCTCACCTCCCACGA
ATCAACCGGTCACATTCAGTCGTTGCCTTCGATCACATTTTCCAGTTCAT
CGCAACCCACACAAAAACAAAATCCAATAGAGGAGCCACAAAAAATAATG
TTCATGCAACAAAGCCTGTGTGAAGAAGCAAGGCGTCGCCTCCACCACCC
TATAGACGCCAGCGTAGGTCCTGGGGCCCATTCTCGCCTGCATTACATCC
TTCCAGTCTGCCTTGTTCGAAGAGCTAGACATGGACGCCGCTCTCACCAC
CCTAGCCTTTTCTTCAGAGACGTCGATGTTCGACAACCATTTCCTTATAT
ACCGCGTGGCCCCAACACAAGCAAGCTTTAGATAGGAGGGGAAAGTCGGC
CATGGCAGCTGCGGCTTTGTGATGGTGTAATTTATTGAACATGGAAACTG
ACTGGAGATTTCCCCACGGTGATATTTATTAAGTCGTTACTACCAAAATT
TGTTCATAACAACCACTTGCCAATTTCTGGCATGTTTTATAACTTATACT
TTTGTAAACCGAATCGGAGACCAATGTGGAATGACGAGCTTTTCGCGCTG
CGGTGGCTGCTGCAAGAAGCATTTCACATTCCAATTTGCATTCCACACAC
CAGTAGAAGGACACGGCAAGGAGAAATACTTTGGGAGGATAAAATTAAGG
GAGGTCTGGAAGGATAAGAAAAAAAAAGAGGTTAGAAGACTGGTGCTGCA
GCTCAATCACGAAAATCGCCAGTTGTTCTTCAGCGACGAATGGCCTCAGA
AGACGGGACACTGCATTGCTCCACCACTCAAGCCCACTCCATTTCCCTCT
TCACCCTCCTCCCTCACCAGGCTTTGTACTCATACTCGAGCAGTGGTGTC
TTCTTTCCTCCATTCCGTTCTCCATTTACTAAGCGCGCAAGAAGGCGGGG
AGCGAAAGCTCAACGCCATCATCGTGATGGCGGAGGCAGCGTCTACACCC
GGGAGCGATTTGCCCATCTCGGACCAGACGTCCAAGGAAGTAAGTAGCCA
GAAAGCAGAGGAAACAGTATTGTGAGAGGGGTCTCCGGAGGAGGAGGAGA
GTTTATTTTGGAGTTGCTCCATGTGCAGCACACTCCCAGACCTCCTCACC
CTCTCTGCACACAACAGGAGTCCCTTCGAGAGATGGGGGAGTGGGCGGCC
CGGTACGAGATGATAGCTGCCATGGGTTACTTGGCCGCGCTATTGATGGT
AGGCAAGGCCTTACACAACTTGGGAAAGATTGCAAAGGTATGGCAGGTTG
GGTGAATGGGGAGTAGGATATGTGGTGGTCACGAGGGTTGGCCCGGGATG
GTGATGTAGGCGAGCGCAAAGCTCATATTACGTCAACCCCGCTTCCTCCT
CTCTATCCTCTTCCATTCCTCTGACACGCTTGCAAGCCACCCACTCATTC
CAATCCCTCTCCCTTCCTCGCGTGTAGTTCCGGTTCACCCCTCCCTCCGC
CGTTATCTCGGGTTTTCTGGGCTTGGGTCTCTATGACATCATGGGGGCTT
GCTCGAAGCTCCTGCAGGTGGAGCTGGAGTCTAGCTTGCGGTCGATTGAA
GTGAACATGTACGTGACAGAGAAGACGCGGCCGAAGGGAGGGTAAGGGGA
AGGTAGGGGGGAAGCGAGGCATGCATCATCTCTACTGTGTATGGCGTCCA
TGAGTTTATCTGTGCGGAGGCCCTTCTCCCTCCCACCACGATCACCATCC
TCCCCACCCCTAGCGTCAACTTCGTCTTCACATCCCTCATCTTGGGCTTC
ACCAGCGGAACCAAGAAAACTAAGGTACGTAGGTAGCCTTCCCCTGCCCT
TCTTCCGTCCCTCCGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCACAGTTCCTCCCTCCCTTCCTCCTTTCCCAACAGATGACCTACAA
GAGGATCTTCGGCCTGATTTTCCACGAGGGCATGCCTATGCTCCTCTACG
CACAGGCGCTCATTTGGGGTGAGGAACGCACCAAAATAGGGAGAGGAGGG
GGGGAAGAAGGGAAAAAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGGC
GAAAGAGAGAGGTGCAAGAAGTGCCTCACATTTTTGCGTCTGATTCCCTC
CCTCCCTTCCTCCGTCCTTCCCTCCTCCCTTTCTTGCCTCCCTTCCTTCC
TTCCTCCGTCCTTCCCTCCTTCTCCCCCCCTCCCTCCTCCCCCTCCCAAA
CAAAGGCAATTCGGTGGTGGCGCTTCTCATCACAGGCATCTACCGTCTCT
GGAACCATGACATATCAGCCTATGAAGGCGGTCTCGTCACCCTCGGTCAG
TCCCTGCCCTCCGTCCCTCCCTTCCTCCCTCCCTCCCTTCTTGCTCTATC
GCCTCCTCACCCCCGCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCAGGCCTGGAAGCCGGGCGTGACATCCTCCCTTCCCGCATCAAGTT
CAAGGAAGAGTCTCTCGCCGTCGTGCACATGGGTGAGAAGGGAGGGAGGG
AGGGAGGGAGGGAGCGAGGGACGGTTGGTGGATGTGGTAGCTTGCATCTG
TTTCTCGCACCGTTCTGACCTCCCTCTCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTAGCG
GACTCGGCCGGCCTGACCATCTCCATCCTGGTCGGCGTCATCCTCGTCGC
CTGCCGCAGGGTCTCGCCCAACAGGTAGGGAGGGAGGGAGGGAGGGAGGG
AGGGGAGGATGTAGGGAGGGAGGGAGGGTTGAGTGTCTACAGTGGGGCGT
ACGCAGTCGTTCACAAGCACGGCTCCCCCCCTCCCTCCCTCTCTCTCTCG
CGCACGACAGGAAAGAGGAATGGTTCGGCATCGGCAGCTGGCGGAAAGAA
CGAGGCGCGTATTTCCCCTCCCTCCCTCCCTCCCTCCCCCCCCCCCTTCC
CCCTCCCTTCCCCTCTCCTTCTAACCCTCCTTCCCTCCCTCCCTCCCTCC
CTCTCTCCCTCCCTCCTCCCCTCCCTCCTCCCCTCCCTCCTCCCCTCCCT
CCTCCCCACCCTCCTCCCCTCCTTCTAAACCTCCTTCCCTCGCCCCCTCC
CCTCTCCCTTCTCTTGCAGGCGGGCAGGGCCCTCTGACAAATCGCGAGCA
CTTCCAGCGCCATGTGGGAGGGGGGGAAGGAGGGATGCACCTCCTCCCCC
CTCCTGGGCGGGCACTTCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGGAGGAGGGGCGCAGGAAGGGAGGAGGGGGAGGAGGATGGAGGAGGA
GGAGGTGGAGTTGGAGGAGGGGAGGGCAACTCCGTCCTTCGGTCCTTCCT
CCTCTTCGGTGAGCAAGAGGACGAAGTCCATCGACACGCAGCAGCAGGAG
GGGCAGGAGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGCAGCAGCAGCA
TAAGAAGAAGGTCTCTGCCCTATCCATCCTCCCCTCGCCATCGAGTGGGG
CTGGCAGGAGGGGAGGGAGGAAGGGGAAGAGGCCTCGGGCTCTTCCAGGT
GTGCAGCAGCAGCAGCAGCAGGAGGGAGGGTGAGTGCCGTGGTTGGTTTT
AGGAGAGATACGACAGACACACGGGCCAGCACACATCTTGATCACCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCGGTCCACAGGGCCACTCCCT
CCGCGGGAGAAGACGCGGCGCTGGGCTCTCACATCGCTCTCATCGCCCTG
TCGGTGTTTCTCGGTTACCTCTTGAACTTATCCCTGAAGTACCTCGGTGG
GCAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAAGGGCA
TGTGGAGAAGGGCATGTATTATACGTATGTAGTTGTTTTTGGAATCGGCC
CCAAAAAACACTTCACCCACCCACCCTCCGTCCCTCCCTCCCTCCCTCCG
TCCCTCCCTCCCAAGAGCTGAACCGTCCATTCCTCCGCAATCACCACCTC
ATCTCGGGCATTCGCCTCTTCAAGATCTGCATGGTGGCAGCGGTCGTGTG
TGTCACCACCATCCGATCCCTGTCGAGCCTGAGGTAGGTAAGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGCGGGCAGGGGAGAGTCAAATACTAAGTGA
TACTTGACCACTGACCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTAGGTTCAAACCCGACTGGTTCCACCGCCTGGCCGGCTTTAGTTT
AGACCTGATGGCCATTGCTGCCATTTCCTCGCAGCGTTTCGACTATTACA
AGCAGGTACGGAGGGAGCGGGGGAGGGAGGAAGGGAGGAAGGGAGGAAGG
AGAGAACGAAGGGCAGCGAGAGGTTGGCAAAATTTCGATTTTAGCATCCC
AACACCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCCTTGTCAGGT
GGATAATATGGAGCTGGTGGTGCTGATCATTTTGGGCTGCGTGCTGTGGA
ACCTGTTGGCCTTCTTCGCCTTCGCCAAGCGCATGTTCCCCAATTTCTGG
TAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGG
GTGGTGTCTGACCATTTACGACCTAGACCGTGCTTCCCAGTGTCTCTTGA
GAAGAGGGAGAGCAGAGAGAGAGCAAAGAAGCAAGGAGAAGGAGGCCTCG
TTCAAGTCAGACACACCGACTCTTCCCTCCCTCCCTCCCTCCCTCCCTCC
GCAGGTACGCTCGTGGTGTCACCCTCATGGGAGATGCCCTCGGCCACAGC
TGGGTGGGCCTGCTGCTGGCCCGGGCCATCGACCCCGCGCTCCAGACGCC
CGTGCCTTTGGCCTTCACCTACAAGCTACTGGTGAGCAAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGACAAAGAGGTCTAT
CTCCCGACAGGTCTCAAGCAATCCTCCCTCCTTCCCTTTCTCCCTTCCTC
CCTCGCCCGCAGGTGTTTGTCGTCCCCGGCTCGGGCGGCAAGAACAACAT
CGTGATGAGCTTGATCGACGTCTGGGGTCTCTGGCCCGCCTTGTGTGTGT
GCCTTACCATGCTGTACTTCTGGATGTACATCTTCGACCGATACTACAAG
CGGAGGTATGACCCCCTCCCTCCTTCCCTCCCTCCCTCTCTTCCGTCCCC
TGTGACAAATGGAAGCATTCTTTTTCCTCCCTATCCCCCCCCCCCCTTTC
CCTCTCCTTCCTAACTCTCTTCTCATTCACTCACTATGCGCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTAGATGGCCTCGCCAACCACGAGGAGGCAG
TGCAGGAGGCACGGTACGGGAAAAAGGCGCGAAGAAATACGGTGGCGAGG
GACGAGGAAGGAAGGGAAGGGCCCGTCTGGACACAGAGGAAGAAGAGGCG
GAGCTGGAACTGCTGGGTAAGTGAGGGAGGGGAGGGGAGCTGGGAATGAG
AAGGAGAGAGGGAGGAAGGATAAGAGGAGGGAAGGGAGGGAGGAAAGGAG
GAAATGAGGGCGGGAGGGGAAATGATTCGACTCAAATATCTTGTCTTACT
GACCTGCACGTCGCTCCCCCTTCCCTCCCTCCCTCCCTCCGTCCCTCCCT
CCCTCTCTTTTTTAGCCATCCAGGGCGATAACTCGCCCTCCCTCCTCCCT
ACCACCGGCCACGATGCCCGCGACCTCGACTCTTTCGCAGGCTTCCGGCC
CTTCCCCTCCCTCTCGGAAGCCTCGACCATTTTGTCCAAGGCCCACATAA
AGCAGATATTGCCGTGCCTGCCGGAGAGAGACGCGGTGCGAAAGTGGATC
AAAGTTTACTGTATGTCCCGCGACGGGGCCAGCCTCGGCACACTCCTTTA
CAAGGTACGGCTTCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTTATTCACGCATCAATGTTGAATCCTTTCCCCTTTCCCTCACCCT
CTCCCTCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTC
CCTCTTCCTCTCCGCCAGGTCATGTCGACGGAGCGGAAGCTGACGTCCTT
CCTGATCGTTATTGAGGACTCTTGGGGTTACATTTTCGGAGGCTACTGCC
CTTGTCCTCTCCAGAACGCCACTGGCTATTACGGCACGGGGTGCGAAAGC
CTTCTTTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCTTCCC
TCCCACTTGAGATGACGGCTTTGCCCCTCAGTTTCGTCATGCCTTCTTCC
CTTCCCTCCCTTCTTCCCTCCCTTCTTCCCTTCCCTCCTTTCTTTCCTTC
CTTCCTTCCTCATCCCCCTTCCCCCCAGCGAGAGCTTCGTGTTCAAGTTC
CACCCTCAATTCACCCCCTACAAGTGGACGGGCAAGAACGATTACTTCAT
CCTCTCCAACGCCCAACACCTCGCCATGGGCGGTACGTCCCACCGGAATT
CCGCCCCCCCTCCCCCTTTTTCCATCCCAACACTCCCCCCGCCCATATCC
TTGCTCCTTCCATATGCCTCGCTCAACCCCTCCCTCCCTCCCTCCCTCCC
TTTGGGTTCTTTCTTCTCCCTCCCAGGAGGCAGCGGCTTTGCCTTCCAAC
TTGACGATGAACTAGACACAGGGGTGAGCGGGCCCTCAGACACGTTCGGG
AACACTCGTCTGTCCTCCCGGCATGTCTTCAAATGCCTCTCTATTGAAGT
ATGGGCCTTCGGGGAAATGAACGATTGAGGGAGGGACGGGTGGGGAAGGA
GGGAAGGCAAAAAGCAGCAGCAGCACGAAAAAGACACGAATGTAAAGATG
ACGACCATCGACCCTCAAAAAGTATTGAGGCCAAAAATCAGTATAAAGGA
ATCAAACGACAGACAAGCGTTCTAGAAAATTCTAGAAGATAAAGACTGGA
CGAGAAAACGATGGGAAAGAGAAGCCAAGACAAAT

Coding sequence (CDS) from alignment at chr4:127609..134843-

>NO04G00290.1 ID=NO04G00290.1|Name=NO04G00290.1|organism=Nannochloropsis oceanica|type=CDS|length=3048bp|location=Sequence derived from alignment at chr4:127609..134843- (Nannochloropsis oceanica)
ATGACGAGCTTTTCGCGCTGCGGTGGCTGCTGCAAGAAGCATTTCACATT
CCAATTTGCATTCCACACACCAGTAGAAGGACACGGCAAGGAGAAATACT
TTGGGAGGATAAAATTAAGGGAGGTCTGGAAGGATAAGAAAAAAAAAGAG
GTTAGAAGACTGGTGCTGCAGCTCAATCACGAAAATCGCCAGTTGTTCTT
CAGCGACGAATGGCCTCAGAAGACGGGACACTGCATTGCTCCACCACTCA
AGCCCACTCCATTTCCCTCTTCACCCTCCTCCCTCACCAGGCTTTGTACT
CATACTCGAGCAGTGGTGTCTTCTTTCCTCCATTCCGTTCTCCATTTACT
AAGCGCGCAAGAAGGCGGGGAGCGAAAGCTCAACGCCATCATCGTGATGG
CGGAGGCAGCGTCTACACCCGGGAGCGATTTGCCCATCTCGGACCAGACG
TCCAAGGAAGAGTCCCTTCGAGAGATGGGGGAGTGGGCGGCCCGGTACGA
GATGATAGCTGCCATGGGTTACTTGGCCGCGCTATTGATGGTAGGCAAGG
CCTTACACAACTTGGGAAAGATTGCAAAGTTCCGGTTCACCCCTCCCTCC
GCCGTTATCTCGGGTTTTCTGGGCTTGGGTCTCTATGACATCATGGGGGC
TTGCTCGAAGCTCCTGCAGGTGGAGCTGGAGTCTAGCTTGCGGTCGATTG
AAGTGAACATCGTCAACTTCGTCTTCACATCCCTCATCTTGGGCTTCACC
AGCGGAACCAAGAAAACTAAGATGACCTACAAGAGGATCTTCGGCCTGAT
TTTCCACGAGGGCATGCCTATGCTCCTCTACGCACAGGCGCTCATTTGGG
GCAATTCGGTGGTGGCGCTTCTCATCACAGGCATCTACCGTCTCTGGAAC
CATGACATATCAGCCTATGAAGGCGGTCTCGTCACCCTCGGCCTGGAAGC
CGGGCGTGACATCCTCCCTTCCCGCATCAAGTTCAAGGAAGAGTCTCTCG
CCGTCGTGCACATGGCGGACTCGGCCGGCCTGACCATCTCCATCCTGGTC
GGCGTCATCCTCGTCGCCTGCCGCAGGGTCTCGCCCAACAGGAAAGAGGA
ATGGTTCGGCATCGGCAGCTGGCGGAAAGAACGAGGCGGGCAGGGCCCTC
TGACAAATCGCGAGCACTTCCAGCGCCATGTGGGAGGGGGGGAAGGAGGG
ATGCACCTCCTCCCCCCTCCTGGGCGGGCACTTCGGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGGAGGAGGGGCGCAGGAAGGGAGGAGGGGGA
GGAGGATGGAGGAGGAGGAGGTGGAGTTGGAGGAGGGGAGGGCAACTCCG
TCCTTCGGTCCTTCCTCCTCTTCGGTGAGCAAGAGGACGAAGTCCATCGA
CACGCAGCAGCAGGAGGGGCAGGAGCAGCAGCAGCAGCAGCAGCAGGAGC
AGGAGCAGCAGCAGCATAAGAAGAAGGTCTCTGCCCTATCCATCCTCCCC
TCGCCATCGAGTGGGGCTGGCAGGAGGGGAGGGAGGAAGGGGAAGAGGCC
TCGGGCTCTTCCAGGTGTGCAGCAGCAGCAGCAGCAGGAGGGAGGGGCCA
CTCCCTCCGCGGGAGAAGACGCGGCGCTGGGCTCTCACATCGCTCTCATC
GCCCTGTCGGTGTTTCTCGGTTACCTCTTGAACTTATCCCTGAAGTACCT
CGAGCTGAACCGTCCATTCCTCCGCAATCACCACCTCATCTCGGGCATTC
GCCTCTTCAAGATCTGCATGGTGGCAGCGGTCGTGTGTGTCACCACCATC
CGATCCCTGTCGAGCCTGAGGTTCAAACCCGACTGGTTCCACCGCCTGGC
CGGCTTTAGTTTAGACCTGATGGCCATTGCTGCCATTTCCTCGCAGCGTT
TCGACTATTACAAGCAGGTGGATAATATGGAGCTGGTGGTGCTGATCATT
TTGGGCTGCGTGCTGTGGAACCTGTTGGCCTTCTTCGCCTTCGCCAAGCG
CATGTTCCCCAATTTCTGGTACGCTCGTGGTGTCACCCTCATGGGAGATG
CCCTCGGCCACAGCTGGGTGGGCCTGCTGCTGGCCCGGGCCATCGACCCC
GCGCTCCAGACGCCCGTGCCTTTGGCCTTCACCTACAAGCTACTGGTGTT
TGTCGTCCCCGGCTCGGGCGGCAAGAACAACATCGTGATGAGCTTGATCG
ACGTCTGGGGTCTCTGGCCCGCCTTGTGTGTGTGCCTTACCATGCTGTAC
TTCTGGATGTACATCTTCGACCGATACTACAAGCGGAGATGGCCTCGCCA
ACCACGAGGAGGCAGTGCAGGAGGCACGGTACGGGAAAAAGGCGCGAAGA
AATACGGTGGCGAGGGACGAGGAAGGAAGGGAAGGGCCCGTCTGGACACA
GAGGAAGAAGAGGCGGAGCTGGAACTGCTGGCCATCCAGGGCGATAACTC
GCCCTCCCTCCTCCCTACCACCGGCCACGATGCCCGCGACCTCGACTCTT
TCGCAGGCTTCCGGCCCTTCCCCTCCCTCTCGGAAGCCTCGACCATTTTG
TCCAAGGCCCACATAAAGCAGATATTGCCGTGCCTGCCGGAGAGAGACGC
GGTGCGAAAGTGGATCAAAGTTTACTGTATGTCCCGCGACGGGGCCAGCC
TCGGCACACTCCTTTACAAGGTCATGTCGACGGAGCGGAAGCTGACGTCC
TTCCTGATCGTTATTGAGGACTCTTGGGGTTACATTTTCGGAGGCTACTG
CCCTTGTCCTCTCCAGAACGCCACTGGCTATTACGGCACGGGCGAGAGCT
TCGTGTTCAAGTTCCACCCTCAATTCACCCCCTACAAGTGGACGGGCAAG
AACGATTACTTCATCCTCTCCAACGCCCAACACCTCGCCATGGGCGGAGG
CAGCGGCTTTGCCTTCCAACTTGACGATGAACTAGACACAGGGGTGAGCG
GGCCCTCAGACACGTTCGGGAACACTCGTCTGTCCTCCCGGCATGTCTTC
AAATGCCTCTCTATTGAAGTATGGGCCTTCGGGGAAATGAACGATTGA

Synonyms

Publications