NO04G00220.1, NO04G00220.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G00220.1
Unique Name	NO04G00220.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2136
Alignment location	chr4:84267..89487 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:84267..89487 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO04G00220.1 vs.
Match: EWM28426.1 (Mak10 subunit, NatC N(alpha)-terminal acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 758.4 bits (1957), Expect = 1.900e-215
Identity = 447/722 (61.91%), Postives = 531/722 (73.55%), Query Frame = 0

Query:    1 MEAGTQDIVTDGKGSGSGSAVWKDITEECRAAASSLGTGEMICAPSFSLFESMSALELMDPKMDESLLEPVECVSSRLARGELPIQVSLTQAARIVGGMLAYEVAWYEGASLLDSLFLCLYPHGAAIHALCSMVGVKRGEQKEEDGEEEGKKGSGGNGGNGAGGGPIMRDAISEDPACMPALVLLALVFGTLKSVGAFREVILDADIYEEEDAHPNSLGLYLGENLLLEDAVFLLEKSRASLASLLEGG----------REGG----REGGEGEAEAIQSLLAHLSFRLALLKMQALLLSFSPALGEMEGATLHKALAEALAALERVKEEEEKEEEEEGKEEEKERGKLGSVAFAFDRGITRALKGNAPRRVIRIPSQSQALERFRQLLLELQESLQAFAFDVNHEV----------FSLQRLRMVLEELAASSPGIIARSFLHRHLVKEEEDLLLGRFPFSLSIAEHMQGMGLPLGLVYSDQCHTFILSAAKTLAEGLRGFCHNRARQRVRLEVLFQDLGVLQEQAASLDADFRVLNQLPDKSTSFLVQWIMEEALRGMQAYIQLGFELELYADVEAEAVLWYLDCVLSIRLQLLSSLENQRLELEHLRRKSEQAARA-KGKEERKSSGATAATGVAAKGGGKKKKVRDKRGKAGGRKELQGEEEEEEEEWRPTVRPDDDALAEAQISLSIQRLLARGTHLALTALGRARGHPPPPPPMAR 698
            M +  +D V +G G     A W DIT +CR AA+SL TGEMIC+P+FSLFE+MSALELMDPKMDESLLEPVE V SRLARG LP+QVS+ QAAR+V  MLA+EVAWY+GASLLDSLFLCLYPHGA+IHALCS+ GV R  +  E G E  ++ SGG    G   GPI+RDAI+ DPAC PAL LLA+VFGTLK+V  FR+VILDADIYEEEDA PNSLGLYL ENL  +DA+FLL+++R  L  L EGG           EGG    R+GG GE   + SL+A L+FR+ALL +  +L SF P+ G   G  +  AL EA+ AL  +KE  ++  EEE  E     G+ GSVAFAFDRGITRALKGNAPRRVI IPS SQA   +R LL +L ++L AFAFDVN EV          FSLQRLRM L+  AA+SPGIIARSFLH+HLVKE+EDLLLGRFPFSL++AEHMQG+GLP+ +V S Q   F+L+AAKTLAE LR  CHN+ARQR RLEVLFQDLGVL+EQA   DADFR  +QL + +T FL+QWIMEEALR MQ+YIQLGFEL+LYA  EAE +LWYLDC+LS+RLQ+L+SLENQR+ELE LRR++  AA + K K+ +K S +   TG   +GGG KKK ++K  K  G    + + EE   E  PT+RPDDDALAE QI+LSI RLLARG HLALT LGRARG  P   P AR
Sbjct:    1 MASVNEDEVDEGTGGSGSGAAWTDITSDCRLAAASLDTGEMICSPAFSLFEAMSALELMDPKMDESLLEPVESVQSRLARGALPVQVSVAQAARVVENMLAFEVAWYQGASLLDSLFLCLYPHGASIHALCSLCGVTRTSEPHESGAEGMRRKSGG----GGAAGPIVRDAITSDPACTPALTLLAVVFGTLKTVAGFRKVILDADIYEEEDAQPNSLGLYLAENLETDDAIFLLKEAREGL-RLQEGGSSQNKGVAGHEEGGEMEERKGGPGEDRDLASLVAQLTFRIALLNLIDVLHSFHPSQGAKAGHAMRDALQEAIDALGTIKEGGKETVEEEKVEAS---GESGSVAFAFDRGITRALKGNAPRRVIHIPSLSQAFLVYRTLLDDLGKTLAAFAFDVNFEVEKEATGTERAFSLQRLRMFLDAFAAASPGIIARSFLHQHLVKEDEDLLLGRFPFSLALAEHMQGVGLPVSVVCSPQSQAFLLTAAKTLAEALRNLCHNKARQRTRLEVLFQDLGVLEEQAEISDADFRAAHQLSENTTPFLLQWIMEEALRHMQSYIQLGFELDLYAATEAEEILWYLDCLLSVRLQILTSLENQRIELEKLRRQTTAAASSDKEKQGKKESKSGTGTG-KGRGGGGKKKQKNKGAKGTG----ENKGEEVAVEGGPTIRPDDDALAETQIALSIHRLLARGGHLALTGLGRARGSWPIEIPRAR 709

The following BLAST results are available for this feature:

BLAST of NO04G00220.1 vs.

BLAST of NO04G00220.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28426.1	1.900e-215	61.91	Mak10 subunit, NatC N(alpha)-terminal acetyltransf...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO04G00220	NO04G00220	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00220.1	NO04G00220.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO04G00220.1.cds1	NO04G00220.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds2	NO04G00220.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds3	NO04G00220.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds4	NO04G00220.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds5	NO04G00220.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds6	NO04G00220.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds7	NO04G00220.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds8	NO04G00220.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds9	NO04G00220.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds10	NO04G00220.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds11	NO04G00220.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds12	NO04G00220.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds13	NO04G00220.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds14	NO04G00220.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds15	NO04G00220.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds16	NO04G00220.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO04G00220.1.cds17	NO04G00220.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr4:84267..89487-
coding sequence from alignment at chr4:84267..89487-

mRNA sequence

>NO04G00220.1 ID=NO04G00220.1|Name=NO04G00220.1|organism=Nannochloropsis oceanica|type=mRNA|length=2136bp
ATGGAGGCCGGGACGCAAGATATTGTGACGGACGGCAAAGGTAGCGGCAG
CGGCAGCGCGGTTTGGAAAGACATCACAGAGGAATGCCGCGCTGCCGCCA
GTTCGCTGGGTACGGGCGAAATGATTTGTGCGCCGTCCTTTTCCTTGTTC
GAGTCGATGAGCGCCTTGGAACTGATGGACCCCAAGATGGACGAATCCTT
GCTCGAGCCTGTGGAATGCGTCTCCTCCCGCCTGGCCCGTGGGGAGCTGC
CCATCCAAGTGTCTCTCACGCAGGCTGCCAGGATTGTTGGGGGCATGCTA
GCGTACGAGGTGGCATGGTACGAGGGCGCGAGTCTCCTCGACTCCCTTTT
CCTCTGCCTCTATCCGCACGGGGCCGCTATTCACGCCTTATGCTCGATGG
TGGGGGTGAAGCGAGGGGAGCAGAAGGAGGAGGATGGGGAGGAGGAAGGA
AAGAAGGGCAGTGGAGGGAACGGAGGAAACGGGGCAGGAGGGGGGCCGAT
CATGCGCGACGCCATCAGTGAGGATCCTGCCTGCATGCCAGCCTTGGTTC
TCCTGGCCCTCGTCTTTGGCACCCTCAAATCAGTAGGGGCTTTCCGGGAG
GTCATCCTTGACGCGGACATCTACGAGGAGGAGGACGCCCATCCCAACAG
TCTGGGTCTCTATTTGGGTGAGAATCTGCTCCTGGAGGATGCCGTGTTCT
TACTGGAGAAGTCACGTGCCTCTCTCGCATCCCTCTTGGAAGGAGGGAGG
GAGGGAGGGAGGGAGGGGGGAGAGGGGGAGGCAGAAGCGATCCAATCACT
GCTGGCCCATCTTTCCTTCCGCCTTGCCCTCCTGAAGATGCAAGCTCTTT
TACTCTCATTCTCTCCGGCGCTGGGCGAAATGGAGGGGGCGACCCTGCAC
AAGGCGCTGGCAGAGGCCCTCGCTGCCTTAGAAAGGGTGAAGGAAGAGGA
GGAGAAGGAGGAGGAGGAGGAGGGGAAGGAGGAGGAAAAGGAGAGAGGGA
AGCTGGGCTCGGTGGCCTTTGCCTTCGATCGAGGCATCACCCGCGCGCTC
AAGGGCAACGCTCCCAGGCGCGTCATTCGCATTCCCTCTCAATCGCAAGC
CCTGGAGCGCTTCCGTCAGCTGTTGCTGGAGCTGCAGGAAAGCCTGCAGG
CTTTCGCCTTCGATGTAAATCACGAGGTCTTCTCCCTCCAGCGGCTCCGT
ATGGTGCTGGAAGAGCTCGCCGCTTCCTCTCCCGGAATCATCGCCCGCTC
CTTCCTCCATCGACACCTGGTGAAAGAAGAAGAGGACCTCCTCCTGGGTC
GCTTCCCCTTCTCCCTCTCCATCGCCGAGCACATGCAAGGGATGGGCCTT
CCTCTTGGTCTGGTCTACTCCGACCAGTGCCACACCTTCATCCTTTCAGC
GGCCAAAACCCTCGCGGAGGGCTTGCGTGGCTTTTGCCACAATCGGGCCC
GGCAACGAGTGCGCTTGGAGGTCCTCTTTCAGGATCTCGGAGTGCTGCAG
GAGCAGGCAGCCTCCTTGGACGCCGACTTCCGAGTGTTGAATCAGCTGCC
GGACAAGAGCACGAGTTTCCTCGTACAGTGGATCATGGAGGAGGCTCTCA
GAGGCATGCAAGCCTACATCCAACTGGGCTTTGAACTCGAGTTGTATGCG
GATGTTGAGGCGGAAGCCGTGTTATGGTACCTGGACTGTGTCTTGAGCAT
ACGCCTCCAACTGCTCAGCAGCCTGGAAAACCAGCGCCTGGAGCTGGAGC
ACCTCCGCCGCAAATCAGAACAAGCCGCTCGTGCAAAAGGGAAAGAGGAG
AGGAAGAGCAGCGGTGCAACGGCAGCGACAGGAGTGGCTGCAAAGGGAGG
GGGGAAGAAGAAGAAAGTGAGGGACAAGAGAGGCAAGGCGGGAGGGAGGA
AGGAGTTGCAGGGGGAGGAAGAGGAAGAGGAGGAGGAGTGGAGGCCAACA
GTTCGTCCGGATGACGATGCTTTGGCTGAGGCACAGATCTCCCTCTCTAT
CCAGCGTCTCCTCGCCCGTGGCACTCACCTCGCCTTAACAGCCCTCGGCC
GTGCCCGAGGACACCCTCCCCCCCCCCCCCCCATGGCTCGGCAGCCTGGA
GGTTCTTCCACCGCTTCAAAGCGTTCTCGGTGTTGA

protein sequence of NO04G00220.1

>NO04G00220.1-protein ID=NO04G00220.1-protein|Name=NO04G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=712bp
MEAGTQDIVTDGKGSGSGSAVWKDITEECRAAASSLGTGEMICAPSFSLF
ESMSALELMDPKMDESLLEPVECVSSRLARGELPIQVSLTQAARIVGGML
AYEVAWYEGASLLDSLFLCLYPHGAAIHALCSMVGVKRGEQKEEDGEEEG
KKGSGGNGGNGAGGGPIMRDAISEDPACMPALVLLALVFGTLKSVGAFRE
VILDADIYEEEDAHPNSLGLYLGENLLLEDAVFLLEKSRASLASLLEGGR
EGGREGGEGEAEAIQSLLAHLSFRLALLKMQALLLSFSPALGEMEGATLH
KALAEALAALERVKEEEEKEEEEEGKEEEKERGKLGSVAFAFDRGITRAL
KGNAPRRVIRIPSQSQALERFRQLLLELQESLQAFAFDVNHEVFSLQRLR
MVLEELAASSPGIIARSFLHRHLVKEEEDLLLGRFPFSLSIAEHMQGMGL
PLGLVYSDQCHTFILSAAKTLAEGLRGFCHNRARQRVRLEVLFQDLGVLQ
EQAASLDADFRVLNQLPDKSTSFLVQWIMEEALRGMQAYIQLGFELELYA
DVEAEAVLWYLDCVLSIRLQLLSSLENQRLELEHLRRKSEQAARAKGKEE
RKSSGATAATGVAAKGGGKKKKVRDKRGKAGGRKELQGEEEEEEEEWRPT
VRPDDDALAEAQISLSIQRLLARGTHLALTALGRARGHPPPPPPMARQPG
GSSTASKRSRC*

mRNA from alignment at chr4:84267..89487-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO04G00220.1 ID=NO04G00220.1|Name=NO04G00220.1|organism=Nannochloropsis oceanica|type=mRNA|length=5221bp|location=Sequence derived from alignment at chr4:84267..89487- (Nannochloropsis oceanica)
ATGGAGGCCGGGACGCAAGATATTGTGACGGACGGCAAAGGTAGCGGCAG
CGGCAGCGCGGTTTGGAAAGACATCACAGAGGTACGTCTACGGTCACCAT
GCAGTAGCCTCCGATGTCTCTTAGCCGCGTGCACCACGCCCACGCATCGA
GTGAAATCTCCTCCTCGATATGAACTAGATAGGAAAGGGTTTATTGTGAC
TGCTGACAGCGCCTTGCCGTTCTAGTTCTTTCTTCTCTCCCATGCGTCTT
GCCCCTGACCATCCCCTTCTCCAACCCCATATCCCCTCGCCTACCCCTCC
ACTCCGATGAATAGGAATGCCGCGCTGCCGCCAGTTCGCTGGGTACGGGC
GAAATGATTTGTGCGCCGTCCTTTTCCTTGTTCGAGTCGATGAGCGCCTT
GGAACTGATGGACCCCAAGATGGACGAATCCTTGCTCGAGGTAGGGTGGA
AGTATAGGGAGAAAGAGAGCGCATCCTTAGCAGTAATGAGTGGCCGCTGT
AAAGACCCAGTGATTTCATTCATCCTACCTTTGAGCTAATTTGCCCACTT
TGTACACTTGAACCAACACAGCCTGTGGAATGCGTCTCCTCCCGCCTGGC
CCGTGGGGAGCTGCCCATCCAAGTGTCTCTCACGCAGGCTGCCAGGATTG
TTGGGGGCATGCTAGCGTACGAGGTAAGGGAAGAAGGAAGGGAAGGAGGA
AGGGAGGGAGGGAGGGAGGGAGGGAGTGTGGCAAAAATTGTCTTGAGGTG
CATGAGAAGCTATCAACAGCAGGAAGAAATCCTGTGTAGGCTTGTTTGAT
GCTTATGTTCTTCATCTCCCTTCTCCACCACAGGTGGCATGGTACGAGGG
CGCGAGTCTCCTCGACTCCCTTTTCCTCTGCCTCTATCCGCACGGGGCCG
CTATTCACGCCTTATGCTCGATGGTGGGGGTGAAGCGAGGGGAGCAGAAG
GAGGAGGATGGGGAGGAGGAAGGAAAGAAGGGCAGTGGAGGGAACGGAGG
AAACGGGGCAGGAGGGGGGCCGATCATGCGCGGTAAGATAGGAAAGGAAG
AGAGAAGGAGGGAGGGAAGGAGCGAAGGAAGGAGCGAAGGAAGGAGGGGA
GAATGGAGTATCGGGGGCGATGCCAATGAAGCATTTCGAGGCAGCAAGCT
GGGTTGTTCATAATACGTGGGCTGAGAAAGCCATGCCTCCCTTCGTCCCT
CCCTCCCTCCCTTACCCAGACGCCATCAGTGAGGATCCTGCCTGCATGCC
AGCCTTGGTTCTCCTGGCCCTCGTCTTTGGCACCCTCAAATCAGTAGGGG
CTTTCCGGGAGGTACGGAGGGAGGGAGGGAGGGAGGGGTAGCACGAAGGA
AGAAAAATGAATTTCAAAATTGAAGAAAAATAAATTTTTAAACAAGATGA
AGAAAAAGAAGTTGATATCGAAGCCTACGAAAATAATGAGGAGGAGAAGG
AGAAGAAGAAGACGTGGTGCGGGATGATGAAAGACAACCCCAACGAGGGG
GCCATCTGTTCCAGGAATGCGACCGTTGTATTTCCTCCCCCTCGGGGGGA
GGTGTTACCTCTGTCCACGAACCCTCCTGGAATCATGGCCTCTGTCAGTG
AAGACAACGCGCTTGTTCACACAAGCTGTCTGACGTACGACGTATTCTTT
CCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTGCCTGCCTGCCTATCTTCA
CCATCCATGCGCATCCCTCCCTCCCCCCCTCCCTCCTTCCCTCCCTTTCT
GCCCAGGTCATCCTTGACGCGGACATCTACGAGGAGGAGGACGCCCATCC
CAACAGTCTGGGTCTCTATTTGGGTGAGAATCTGCTCCTGGAGGATGCCG
TGTTCTTACTGGAGAAGGTAGGGAGGGAGGGAGGGGGAGGGAGGGAAGGA
GGGAAGGTGGAACGGATTGTCAGGGCTGCCGCTTGTCCTTGACTACGCCT
CTCATGCTTGCTCTTATTATACACCCCAGTCACGTGCCTCTCTCGCATCC
CTCTTGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGGGGAGAGGGGGAGGC
AGAAGCGATCCAATCACTGCTGGCCCATCTTTCCTTCCGCCTTGCCCTCC
TGAAGATGCAAGCTCTTTTACGTGAGTGGCATGGAGGGAGGGAAGGAGGG
AGAGAGGAAGGAGAGGAGGTGGGAGAGAAGGAAAAAGGGAGGGAGGGAGG
GAGGGAGGGGGTAGTAGATCTGGCGCAGGAGTGAGCCACTTTGACAGGGG
AGGATGGAGGAAGAGGGGGAAGGAGGAATAACGAGAGGGAGAGGGAGGGA
AAACTCTCGAAACCTGCGCTGAATCATTCGCCGACCTTCTCCCACCATTC
ACATCTTCTTTCCTCTCTTCTCTCAACTTGCGCCTATATATACACATACA
CATTTTCAGTCTCATTCTCTCCGGCGCTGGGCGAAATGGAGGGGGCGACC
CTGCACAAGGCGCTGGCAGAGGCCCTCGCTGCCTTAGAAAGGGTGAAGGA
AGAGGAGGAGAAGGAGGAGGAGGAGGAGGGGAAGGAGGAGGAAAAGGAGA
GAGGGAAGCTGGGCTCGGTGGCCTTTGCCTTCGATCGAGGCATCACCCGC
GCGCTCAAGGTGAGGTTCAAATGGAAGGGACGAAATAAAGCTTCCAGAAC
AAGTAAGCGAGCGATCGGCACGCTCATCCCTTCCGTCCCTCCCTCCCTCT
TTTTAGGGCAACGCTCCCAGGCGCGTCATTCGCATTCCCTCTCAATCGCA
AGCCCTGGAGCGCTTCCGTCAGCTGTTGCTGGAGCTGCAGGAAAGCCTGC
AGGCTTTCGCCTTCGATGTAAATCACGAGGTGAAGAGGGAGGGAAGGAAA
GAGGGAGGGAAAGAAGGAGGTGTCTGTATCGACACTTCTGATTGCCCGTC
TTTCGCGCATTTTCTCTGGCATGGAATTTGGAGGGTTTCCCGCTTCATTC
ATTCACTCTATCTTTGTTTCTTTCATTCATTCTTCCTTTCTTTCTCTCAT
GTTTATTTTTTCCTCTCTCCCCAGGTCTTCTCCCTCCAGCGGCTCCGTAT
GGTGCTGGAAGAGCTCGCCGCTTCCTCTCCCGGAATCATCGCCCGCTCCT
TCCTCCATCGACACCTGGTGGTGAGAAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGACTGAACCTCACAGGCTTTCCTCCTTGTCCGCCGATGGACCA
ATAACGTTCCTCCTTGTTATCAATCGTGTTTCACCCTCCCTTCCCTCCCT
TCCCTCCCTTCCCTCCCTTCCCCCCTCCGCACACTAGAAAGAAGAAGAGG
ACCTCCTCCTGGGTCGCTTCCCCTTCTCCCTCTCCATCGCCGAGCACATG
CAAGGGATGGGCCTTCCTCTTGGTCTGGTCTACTCCGACCAGTGCCACAC
CTTCATCCTTTCAGGTACCTGCGCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCTCCCTCTCTCTTTGACCGATTTGC
GACCAAGTTAAGTTTTTGGGCCCTCCTTCCCTCTCTCCTCCTTAGCGGCC
AAAACCCTCGCGGAGGGCTTGCGTGGCTTTTGCCACAATCGGGCCCGGCA
ACGAGTGCGCTTGGAGGTCCTCTTTCAGGTAGGGGGGAAGGGAGGGAGGG
AGGGAGGAAGGAAGGGAGGAAGGGAGGAAGGGAGAGAGGGAGGAAGGGAG
CTCGCGAGCTTACGCTGGAGTAACAGGTGAGAAGGAGGGGAAGAGGAAGA
AAGGAAGGAGGGGGAAGAGCCACACAGACATGTGGAGATAATCCGTTCGT
TTACTTGATTCATACGTTCGTTCATCGATCTGTTGATTCATTCATCTATA
GATTTGTTCATTCACTGATTCACTCACTGCCTCCTTGTCTAATTGATTGG
TCGAATGGTCGATTCTTGTCCTGTCGTCCACAGGATCTCGGAGTGCTGCA
GGAGCAGGCAGCCTCCTTGGACGCCGACTTCCGAGTGTTGAATCAGGTGA
GGGCCCGGAGGAAAGAGGGAAGGGAGAGAGGGAGGGAGGGAGGGAGGGGG
GAAGGGAGAAGCACGCATGGGCTCAGGCCATTCACTCTCTCAAATCCTCC
GCATCTCTTGGCTCCTTTTTTTCTCTGGGCAGCTGCCGGACAAGAGCACG
AGTTTCCTCGTACAGTGGATCATGGAGGAGGCTCTCAGGTTGGATCGGAT
CCCTCTTCCCCTCCCTCCTTCCCTCCCTCTTTATTTCCCACTTTCCCTCT
CTCCGTTTGACACCTCGGAGCTTCACGGTACCCGCTCACATGTATCTCCT
CCCCCCTCCCCCCCCCTCCCTTCCACATAGAGGCATGCAAGCCTACATCC
AACTGGGCTTTGAACTCGAGTTGTATGCGGATGTTGAGGCGGAAGCCGTG
TTATGGTACCTGGACTGTGTCTTGAGCATACGGTGAGGGAGGGAGAGGGA
GGGGAGGGAGGAGAGGGGAAAGGAGGGAAAGAAGGAGGGTGGGTAGGAAA
GTACTCTCGTTCGGCCCCGAAGGCAAGCGAAGGCAGGGCATACCAAACCT
CTTCTCATCCCATTTTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTC
CCTCCCTCCCTCTCTCCCTCGCTCTCTCCCTCCTTCTCTCCCTCGCTTCC
TTTCTCCTTCCCTCGCCGTAGCCTCCAACTGCTCAGCAGCCTGGAAAACC
AGCGCCTGGAGCTGGAGCACCTCCGCCGCAAATCAGAACAAGCCGCTCGT
GCAAAAGGGAAAGAGGAGAGGAAGAGCAGCGGTGCAACGGCAGCGACAGG
AGTGGCTGCAAAGGGAGGGGGGAAGAAGAAGAAAGTGAGGGACAAGAGAG
GCAAGGCGGGAGGGAGGAAGGAGTTGCAGGGGGAGGAAGAGGAAGAGGAG
GAGGAGTGGAGGCCAACAGTTCGTCCGGATGACGATGCTTTGGCTGAGGC
ACAGGTAGGAAGGGAGGGAGGAAAGGAATAATGAAGGGAGGGAGGGAGAG
ACATGTCTCACTTATCTGCCAGCGCGCTTTACTCTCTCTCCATCCCTCCC
TCCATCCCCCCCCTTTTCCAGATCTCCCTCTCTATCCAGCGTCTCCTCGC
CCGTGGCACTCACCTCGCCTTAACAGCCCTCGGCCGTGCCCGAGGACACC
CTCCCCCCCCCCCCCCCATGGCTCGGCAGCCTGGAGGTTCTTCCACCGCT
TCAAAGCGTTCTCGGTGTTGA

Coding sequence (CDS) from alignment at chr4:84267..89487-

>NO04G00220.1 ID=NO04G00220.1|Name=NO04G00220.1|organism=Nannochloropsis oceanica|type=CDS|length=2136bp|location=Sequence derived from alignment at chr4:84267..89487- (Nannochloropsis oceanica)
ATGGAGGCCGGGACGCAAGATATTGTGACGGACGGCAAAGGTAGCGGCAG
CGGCAGCGCGGTTTGGAAAGACATCACAGAGGAATGCCGCGCTGCCGCCA
GTTCGCTGGGTACGGGCGAAATGATTTGTGCGCCGTCCTTTTCCTTGTTC
GAGTCGATGAGCGCCTTGGAACTGATGGACCCCAAGATGGACGAATCCTT
GCTCGAGCCTGTGGAATGCGTCTCCTCCCGCCTGGCCCGTGGGGAGCTGC
CCATCCAAGTGTCTCTCACGCAGGCTGCCAGGATTGTTGGGGGCATGCTA
GCGTACGAGGTGGCATGGTACGAGGGCGCGAGTCTCCTCGACTCCCTTTT
CCTCTGCCTCTATCCGCACGGGGCCGCTATTCACGCCTTATGCTCGATGG
TGGGGGTGAAGCGAGGGGAGCAGAAGGAGGAGGATGGGGAGGAGGAAGGA
AAGAAGGGCAGTGGAGGGAACGGAGGAAACGGGGCAGGAGGGGGGCCGAT
CATGCGCGACGCCATCAGTGAGGATCCTGCCTGCATGCCAGCCTTGGTTC
TCCTGGCCCTCGTCTTTGGCACCCTCAAATCAGTAGGGGCTTTCCGGGAG
GTCATCCTTGACGCGGACATCTACGAGGAGGAGGACGCCCATCCCAACAG
TCTGGGTCTCTATTTGGGTGAGAATCTGCTCCTGGAGGATGCCGTGTTCT
TACTGGAGAAGTCACGTGCCTCTCTCGCATCCCTCTTGGAAGGAGGGAGG
GAGGGAGGGAGGGAGGGGGGAGAGGGGGAGGCAGAAGCGATCCAATCACT
GCTGGCCCATCTTTCCTTCCGCCTTGCCCTCCTGAAGATGCAAGCTCTTT
TACTCTCATTCTCTCCGGCGCTGGGCGAAATGGAGGGGGCGACCCTGCAC
AAGGCGCTGGCAGAGGCCCTCGCTGCCTTAGAAAGGGTGAAGGAAGAGGA
GGAGAAGGAGGAGGAGGAGGAGGGGAAGGAGGAGGAAAAGGAGAGAGGGA
AGCTGGGCTCGGTGGCCTTTGCCTTCGATCGAGGCATCACCCGCGCGCTC
AAGGGCAACGCTCCCAGGCGCGTCATTCGCATTCCCTCTCAATCGCAAGC
CCTGGAGCGCTTCCGTCAGCTGTTGCTGGAGCTGCAGGAAAGCCTGCAGG
CTTTCGCCTTCGATGTAAATCACGAGGTCTTCTCCCTCCAGCGGCTCCGT
ATGGTGCTGGAAGAGCTCGCCGCTTCCTCTCCCGGAATCATCGCCCGCTC
CTTCCTCCATCGACACCTGGTGAAAGAAGAAGAGGACCTCCTCCTGGGTC
GCTTCCCCTTCTCCCTCTCCATCGCCGAGCACATGCAAGGGATGGGCCTT
CCTCTTGGTCTGGTCTACTCCGACCAGTGCCACACCTTCATCCTTTCAGC
GGCCAAAACCCTCGCGGAGGGCTTGCGTGGCTTTTGCCACAATCGGGCCC
GGCAACGAGTGCGCTTGGAGGTCCTCTTTCAGGATCTCGGAGTGCTGCAG
GAGCAGGCAGCCTCCTTGGACGCCGACTTCCGAGTGTTGAATCAGCTGCC
GGACAAGAGCACGAGTTTCCTCGTACAGTGGATCATGGAGGAGGCTCTCA
GAGGCATGCAAGCCTACATCCAACTGGGCTTTGAACTCGAGTTGTATGCG
GATGTTGAGGCGGAAGCCGTGTTATGGTACCTGGACTGTGTCTTGAGCAT
ACGCCTCCAACTGCTCAGCAGCCTGGAAAACCAGCGCCTGGAGCTGGAGC
ACCTCCGCCGCAAATCAGAACAAGCCGCTCGTGCAAAAGGGAAAGAGGAG
AGGAAGAGCAGCGGTGCAACGGCAGCGACAGGAGTGGCTGCAAAGGGAGG
GGGGAAGAAGAAGAAAGTGAGGGACAAGAGAGGCAAGGCGGGAGGGAGGA
AGGAGTTGCAGGGGGAGGAAGAGGAAGAGGAGGAGGAGTGGAGGCCAACA
GTTCGTCCGGATGACGATGCTTTGGCTGAGGCACAGATCTCCCTCTCTAT
CCAGCGTCTCCTCGCCCGTGGCACTCACCTCGCCTTAACAGCCCTCGGCC
GTGCCCGAGGACACCCTCCCCCCCCCCCCCCCATGGCTCGGCAGCCTGGA
GGTTCTTCCACCGCTTCAAAGCGTTCTCGGTGTTGA

Synonyms

Publications