NO03G05540.1, NO03G05540.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G05540.1
Unique NameNO03G05540.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6680
Alignment locationchr3:1587797..1595053 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1587797..1595053 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO03G05540.1 vs.
Match: EWM30024.1 (hypothetical protein Naga_100346g2 [Nannochloropsis gaditana])

HSP 1 Score: 189.5 bits (480), Expect = 2.800e-44
Identity = 119/234 (50.85%), Postives = 147/234 (62.82%), Query Frame = 0
Query:   53 QSRNESSLTAGRVLSASSFVMEKGRGDKNEAGVGGAGKARGGIPRLGQSPNAEDDAALVRLLAGLQREADYLTNRHSTSSSSSSSCGDSPFITPVGSHHFQGAHLEALEALLESNEGTDIELHPSFRPSSSSSFTPSSYPSSSTTVFPPPLTLHSKITRHGTRIFRPKTRVQVPWSYPVTHALATFLYTGRLVVSTAHLADTYRAAQEAGVRSLAYLLRTHPFYALRLTSAEKA 287
            QS+  S +   R+LSAS   M  G+      G     + R  +P LG   N  DDA LV  +AGLQREAD L +    +    ++   SP      S   +  HL ALE+LLES +G D+ELHP+  PS    F+P +  S+S   FPPPL LH++I RH +RIFRP  R+QVPWS PVTHALATF+YTGRL +STA LAD Y AA+EAG R L YLLRT+P+YALRLTS EKA
Sbjct:   58 QSQTPSEMAGERILSASGRWM--GKEKHPTWGENEIDRDREELPLLGMPTNETDDATLVAFMAGLQREADTLNDTRDPTLWKPAA-RSSP-----SSQRRRSYHLHALESLLESGQGADVELHPAVPPS----FSPEAV-STSALAFPPPLALHARILRHASRIFRPHARLQVPWSAPVTHALATFMYTGRLTLSTALLADVYLAAREAGARPLLYLLRTYPYYALRLTSGEKA 278          
The following BLAST results are available for this feature:
BLAST of NO03G05540.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30024.12.800e-4450.85hypothetical protein Naga_100346g2 [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05540NO03G05540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G05540.1NO03G05540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G05540.1.cds1NO03G05540.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G05540.1.cds2NO03G05540.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G05540.1.cds3NO03G05540.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G05540.1.cds4NO03G05540.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G05540.1 ID=NO03G05540.1|Name=NO03G05540.1|organism=Nannochloropsis oceanica|type=mRNA|length=6680bp
CTCATGAAAAGAAGCAGAGCAGAGCGGGGAATTTCAGTTCAACAAAAAGC
AAAAGCAAAAACCCCACCAGCAGTCGGCCTGCTTTGAGTTCGACTTGAAA
GATGCTCCGCAGTGCAGCATTGATGCTTAAGTGCGGTGATGCATGCCTTG
GTGACATGATTGTGGCTGTGGCCCGTCCAACATGTAATCATCTACAGCCG
CAAGCCTATCTCCTTTTCAATTCGCTCCAGTGGGCGCCTGCAAACCAGTT
TGTCAGGAAACCAATCAACAGCGGTATAGGACAGCAACACACACACACAT
AAACGTATATTTTATATTCACAGTGCCCGAGGGCAAGGGGATACATTTTT
CCTCAGGACCTAGCTGGCTGGGTGGTCGGCATTGGCTCTGGTTGAACACA
CACGCACGCATTATTCCATCTCTTTACTTTGATTCGTTCGTTCATCTTCC
CACCATTCCTGTCCAAAGTAGTCCATTAGGTACTAATTCCATGCACGCGG
GTCGCATCCTTTCCATCTCTGTGCCCAATGGTAGTAGCGTGCCGGACGTC
TCCTTTTCCTTCCATCATCAACGGCAGCAGCAGCAACAGCAACAGCAACA
ACAGGAAAGCCGGGCGGAGGAGCAGGAGGAGACAGTGCGATGCCACCAAA
GCCGAAATGAGTCCTCGTTGACGGCTGGGAGGGTATTGTCCGCTTCCTCT
TTCGTGATGGAAAAGGGGCGGGGTGACAAGAATGAAGCAGGAGTAGGTGG
GGCAGGGAAGGCAAGGGGAGGGATACCTCGCTTGGGACAGTCACCCAATG
CCGAAGATGATGCGGCACTTGTTCGTCTCCTCGCAGGGCTTCAAAGGGAG
GCTGATTACCTCACAAACAGGCACAGTACTAGCAGCAGTAGCAGCAGCAG
CTGTGGTGATAGCCCTTTCATCACACCAGTGGGATCCCACCACTTCCAAG
GCGCCCATCTGGAAGCCTTGGAAGCCCTCCTTGAGTCCAATGAAGGCACC
GACATCGAACTCCACCCCTCCTTCCGCCCTTCCTCGTCCTCTTCCTTCAC
TCCCTCCTCCTATCCCTCCTCCTCCACCACCGTCTTCCCCCCCCCATTGA
CCCTCCATTCCAAAATCACCCGTCACGGAACCCGCATCTTTCGACCCAAA
ACCCGAGTCCAGGTTCCCTGGTCCTACCCCGTCACACATGCCCTCGCCAC
CTTCCTCTATACGGGCCGCCTCGTCGTCTCCACTGCCCACCTGGCCGACA
CCTACCGCGCCGCGCAAGAGGCCGGGGTACGGTCTTTGGCCTACCTCCTA
CGCACGCATCCTTTCTACGCCTTGCGCTTGACGAGTGCCGAAAAAGCGAG
CCACGTTCGCCGCTTCGCCGTAGTTTCCGGGAACGAAAGGCTCAGTGCCC
TCTGCGATGCTTACACGCGCCGGCTGGCCTCCCATAAAACCACATACACG
CTGGTGGCCCCTGTGCCTTTTGCCTGGCTTCGGGCCCGCCCGCTTTTGAT
AGGGGACAAGTCCCTCCTCCTCGCATTCAGCCACCGCCCTTCCCCCGTCC
ACGAAACGTCCAGCAATATCGTCCTCTCCATACAAGATCACCTCCCCTCT
TCCTCGCCCCCCTCCTCCCTCCCGCTTTCTCTTTGTCACAACACCTGCCT
CCGCCTCGACAAGGACCCTTCCACCCCCTGGTCCCCGACCTGGTTCGCCG
CCTCGTCTCCTCTCCCTCCCTCCCCCTCACCCGCCTGTATGGAGGGTGAC
AAAAACGGACTTGTGTGGCTTTACGTCTTATGCTCTCAGGCACATGCACC
GGTCGTGCTCAAGGCGCTCCTCAGGGAGCTTAGCGTGTCCAAGGCACTGT
GCGACGCCGAGCCCCAGGCAGGGGTTGAGGGAGGGAGGGAGGAAGCGGTA
GAGGGAGGAGGAGGGGAGCGATCAGATTCAGTCTCGTCCACGGCATCGAG
CGAGTCGTCTTTGGCTTCCTTCTCCTCCTACTCCTCCTCCTCTTCCGTTA
GCAGTGAGGAAGGGGGAGAAGAAGATGGGGGGGGGAAGGGAACAATGATG
AAGAGGGAATGGAGGCGGGGCAGGAGGAGGAAAAAGACGGGATGCAGGCG
GCGGGAAATGAGATCGAGATGGAGGAGGGAGGGAGGAAGAGGGGGAAAGT
GCGAGTGAAGAGTAGTCGAGGGATTATCTACAGCATTCGTTTTGAAGAGC
ACAAAGTGTCCTCCCTCCCTTCTTCCTCCTCGCCGCATCACCGTCGTCAT
CACCACCACCACCACCACCACCACCACCACCACCTCAACAACAATAACAA
CAATATCAACAAGAAGAAGAACAGTTTCAAGGTTCTCTCGCTTTGGGCTT
GGGGCGCTGCAACGAAGAAGGACGGAACGGATTATGAAGACGAGGAAGGG
AAGGAGGACGGGGAGGAAGAAGTCTTTGCTACCTTGGAAGCTTACATGCC
GCAGATGCCAGTGGATACGTTTTCCTCCTCCTCTACCACCACCATCAAAG
CCACCCTCCGCGTTGTGGATCCCCCTCTGCCCCTCCTGGCCCACGTGCTG
GCCGGGACAGATGCTGTGTCTGTCGACTGGGAGGGAAATGCTCTCCTCCT
CCCCCACCTGCCGCTGCCGACCCTTGAGGTCCTCCTCGTCCGCTTTCTCC
TGCTGTCCTATTCCTCCCCCTCCTCTTCCTTATCCCTCTCTGTTTCCCTC
CTCGAAAGGCATAAAAACAATTCAATTTCCAACGAGGATGAAAAAGGAGG
GCTGGAGCAAGGAAATACCGGTGTGACCGGCCTTCTCCATCCCTCCCTCA
CCCTTGAACCGGAGGACGCCGAGGGGGAAATGGCCTTCTCCTTCAACAGG
AGCAAGACTTCGAGATCCCGCTTGGAGAACAATCTAATTGAGGGAGGAAG
AGAGGGCGGAGAGGAGGAGAGGAATAATTATTATAGTCGTCATTGGCACC
ATATTCCTGCGCGGGAGATGAAACGGTTGGTGCATGTGAAGGGGTGGGGA
GGAGGGGGAGGGCGGGCTTAGGGATCGCCTAGGAAGGAGGGGATATGGAT
ATTTTTACATCAGAAGTCTGAAATAGTGCGCGAAGAGTGGAGGAATCAAA
AAGCGGGAAATGGCTGAAAAGCTTCGTAGACTCGTGGAAAAGAAGGAAGG
AGTTAAGGTGATGGATGATGCTTAGAAATGAGAGAGGTGCCTTGGGAAGA
CACCTTATGAAAAAGCAAACTCACGTGAATGGCAAGAAAGATACATAGAT
AGACAACTGATATGATAAGAAATCGATTCTTCATCACTTAGATTTAAATC
AGGCATCTAGAGGAAAGGGGGTAGAGATAAACCATTCACTTTTCGTTTTG
ACGTGGGTTTTTGAGCGTTCTCCGGGAAGAGTAGGGGAGTGAAGAGGAAG
CCACTTGCACTTTCTGTACCACCAACAGTGAAAACAAGTCAATAGGGACT
GACGGGAATCGGGAGAATTTTGAAATTTCTGACCATCCATATATTGACTG
AGATCCCTTTTATATGAGGGGTGAAAGAGAAAAGAGCGATTTTTGATTGG
GCCTCAAACTATCTCAAACGCCCCACTGCAAATAGGGACAAGGCCGTATC
CGTTTGCGATGGTTTATGAGAGCCGATTTTGAAGTGATCTAAATTAAGTG
CTCCGTAGCGGGCTTTTTGACATTTCCAGTATCAACTTACCAAAAAAAGA
AAATTAACAATTGATCGTTTACATATTCCCGTGGCTTTTCTTTTTTTTCC
AGGTCTTGTCTTGACTCCTCAATTTGCAAATGTCCACTTGCTTGGCATCT
TGCAAGCCAACTGAGTTTCTGACCAGACATGCTCATATATTGTCTCTCCG
AAAACTCATAAGCACAACATCAATGAACACACAACTGAACCTTTCCCGTG
TTGACTTTACCTGCTCAACAGAATACCCCCGCTGATATCGTCCTGAGGAA
GTGTGTCACTTCTTCTTATGTCGCCTACTGTTGGATTAGCGAAACATGAA
TTCCATATTACTTTCTCACAACACGTCTTTCTCATTATTGCGTCCACAGG
TCTAATATCTCAGCTACTCTGATGCTTTTTGTGTATCAACTGCGGTGTTT
TCCGTGTAAGCCTATATGCGGCTTTTATTGAATCTCTGGTGTTGTGTACG
TACTTTCCTGGTTAATTTCTTTTGTATCACATGCTTCATAACTTACTTCT
CCCACTGAGTCGTGGCCCAGATTCGAGACAAGGCTGGCGCATAGTTTACC
CCATCCTTCAATAGCACTACCTTGACAAAAATCTAATGGTATTCAACGTC
TTACTACCTTTCCGGATCTAGTACATTGTTAACCAATGTTATCATTACGT
GTCGACCATTGTTGGTCATGGCAAGAAAGCCTTACTAATTTAAAATCCTG
AAATCAATTACTGTTAATTATGGCTCCCTTCGTCTTCCTCTATTTTCTTT
TCCTCCTCCGTATTGAGCGCTTGTCGTTGCAACAATTCCCGCACCGTCCA
TGGTCCATTCTCTTCCTTTCGCAGCATTGTGCTCTTCCCAGCTCCCTCAC
CCTTGCCCAGCAACGCCGCCACATGTCCCGCCGTCTCAACCAAAGGCAAA
GCTACCCGGACACTAAATTTCTCCCATAGACCAAGGGCACACAGCGTCTT
TTGGTCCAGCGATGTGGTAGCCAGCACTACCCCCACTCGGGACATTTTTG
CAGGGGTACGACCGAGGACTGCAAGGAGGCTATGAAGACGTGGCAAAGAA
ACTCGACCGCCTTGTAGCGGCACGTACTGCGAAAGGCCCTCCAAGTCGTC
CAGCATCAGCAGGGAATGTGGGCATTGGTGCGCATCCTGTACAGCTTGGG
CTAGTGTGTCGCATGCGGCTTCTTCTCCCAAGCTCGCAAGTTCTTGCCCC
GTGAGATGTCGACGAAAGGTAAACCCGCCGGCCAAGGAGCCAAGGTGAGC
AAGCACAGCCGACTTCCCTGCGCCGGGAGGGCCTTGAAGAAGAATCGTCA
CAAGGGGCAGCTGGCCACCGTTACGAGCTTGATCGAGGGTAGTTAGTAGG
CCCTGGACGAGGGTCGGTACCTCGGGGCGGAAGGCCACAAACCCCATGCG
TTGGTGCGTGGCCCACTGCTGGCTCGCAGCGCCAAAGTGGGGCTTTGCTT
CGCGGAGCGCCCGCAGCAAGTCAAGCATACACAAGTTCAATTTCGACGAT
GATAAGTCGCTTTTAATTACATCAGCATCCAGCACATCATGCTTACGACT
GACCTGTCGCTGTAAGGCAAAAGACAAGCCTCCCTTGACGACGCCCTCGA
TCTCCGCGCCAGTAAAATTAGGCGTCAATCGTGCGAGCTGGTGGAAGTCT
ACGTCGGCGGACAAGCAACCCTCGTTGGCAAAACCCCGGGTATGAATATG
AAATATCTGTGCCCGGCCTGCTTCGTCGGGTAGACCAACCTCCACATGGA
CCTCAAGACGGCCTGGGCGTAAGAGTGCGTCATCCAGGAGGTCTTTCCGG
TTGGTGGTGCCGATGCACAATATGTTGTCAAAGGCCGCCAACCCGTCGAT
CTTGGAAAGAAGCTGGTTAACGCAGCTGTCCAGAACTCCCGACGAATCCC
GCAGCGTCCCCCGCTTTCGCGTCAAGGCGTCTATCTCGTCAAATATGATT
ACGTGCAAGGCCGAGGCGCTGCCTTTCTCCTTGAATTCTTGTTCAGCGTC
CTGGAAAATGGCCCGGATATTCTCTTCGCTCTTACCCACCCACATGGACA
GAAGCTCTGGCCCAGAAATGAGTTTAGGTTTAGCAGCATGCAGTAATGCG
GCGAGTTGACGTGCCACGAGCGTCTTACCCGTGCCTGGTGGCCCGTGTAA
CAAAATGCCCCGGACGTGCTTGACGCCAAGTCGCTTGGCCATGTCCGGAG
ACAGGAGGCGCGATGCCAAGGCCCGGCGCAGCAAGGTTATAACGGGGCCA
TCCAGGCCACCAATGTCCAGCTGATGTAGGAGTGCAGATGTGTTCTTGGA
GGCAGAGTTGGTAGTGATTGCGGCTTCGGTATCCTCACCTTCATTCATGA
GAAGCTCGCGCAGGAGGGCCAGGGATGTGTTCGGTGTCGGAGAAGTGGGA
GTTTGGGGAGCTTGGGGTGTACGAGCCATGGCATGTTTGCCGCGTGCCAT
GATTATTCGATAGAGAAAGTTTGCTGTGCTGGTATCAGTGTGTGGGGGAA
GAGGGTAAGGGCGTCGTCGAATAAGGAGGAGGTTGTGGGAGTGATGAAAG
CGCTTCGTGCAGAAGATCGAGAACAATGCAAGATGGAAAGTGCAAGAGAG
AAGTATCTTGTGTGTTGTTGACAATGCCTGCATTAAATACATGCACGAGG
CTTCTTAGATGGAGGAAAGTGGGGCGCGTACATCGTCGCCGGAAAAGTGA
GGTTGAGACAGAGGCGTTTGGTACGAGGGAGGAGAAAGGGGTGATGATGG
TTGGATTATCGTGCTGCAATATTATTTCTTAATAGGTTTAACACCAACCA
GGACATTGAATTAAAATGCAGGAGACTTGACGCTAAGGGAGCCAAGAAAC
TCGCACCGAACAAAACGCCGCCGGACAAGAGGCAAACGTAAAGCGTATGC
TCTTCTGCTGCTGCTAAATTGCATGGATGATTCAGTGAAAGAGCGTGGAC
AGAGGGTTGAAAATGCTGTCAAGGCCCAAG
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protein sequence of NO03G05540.1

>NO03G05540.1-protein ID=NO03G05540.1-protein|Name=NO03G05540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=556bp
MHAGRILSISVPNGSSVPDVSFSFHHQRQQQQQQQQQQESRAEEQEETVR
CHQSRNESSLTAGRVLSASSFVMEKGRGDKNEAGVGGAGKARGGIPRLGQ
SPNAEDDAALVRLLAGLQREADYLTNRHSTSSSSSSSCGDSPFITPVGSH
HFQGAHLEALEALLESNEGTDIELHPSFRPSSSSSFTPSSYPSSSTTVFP
PPLTLHSKITRHGTRIFRPKTRVQVPWSYPVTHALATFLYTGRLVVSTAH
LADTYRAAQEAGVRSLAYLLRTHPFYALRLTSAEKASHVRRFAVVSGNER
LSALCDAYTRRLASHKTTYTLVAPVPFAWLRARPLLIGDKSLLLAFSHRP
SPVHETSSNIVLSIQDHLPSSSPPSSLPLSLCHNTCLRLDKDPSTPWSPT
WFAASSPLPPSPSPACMEGDKNGLVWLYVLCSQAHAPVVLKALLRELSVS
KALCDAEPQAGVEGGREEAVEGGGGERSDSVSSTASSESSLASFSSYSSS
SSVSSEEGGEEDGGGKGTMMKREWRRGRRRKKTGCRRREMRSRWRREGGR
GGKCE*
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mRNA from alignment at chr3:1587797..1595053+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G05540.1 ID=NO03G05540.1|Name=NO03G05540.1|organism=Nannochloropsis oceanica|type=mRNA|length=7257bp|location=Sequence derived from alignment at chr3:1587797..1595053+ (Nannochloropsis oceanica)
CTCATGAAAAGAAGCAGAGCAGAGCGGGGAATTTCAGTTCAACAAAAAGC AAAAGCAAAAACCCCACCAGCAGTCGGCCTGCTTTGAGTTCGACTTGAAA GATGCTCCGCAGTGCAGCATTGATGCTTAAGTGCGGTGATGCATGCCTTG GTGACATGATTGTGGCTGTGGCCCGTCCAACATGTAATCATCTACAGCCG CAAGCCTATCTCCTTTTCAATTCGCTCCAGTGGGCGCCTGCAAACCAGTT TGTCAGGAAACCAATCAACAGCGGTATAGGACAGCAACACACACACACAT AAACGTATATTTTATATTCACAGTGCCCGAGGGCAAGGGGATACATTTTT CCTCAGGACCTAGCTGGCTGGGTGGTCGGCATTGGCTCTGGTTGAACACA CACGCACGCATTATTCCATCTCTTTACTTTGATTCGTTCGTTCATCTTCC CACCATTCCTGTCCAAAGTAGTCCATTAGGTACTAATTCCATGCACGCGG GTCGCATCCTTTCCATCTCTGTGCCCAATGGTAGTAGCGTGCCGGACGTC TCCTTTTCCTTCCATCATCAACGGCAGCAGCAGCAACAGCAACAGCAACA ACAGGAAAGCCGGGCGGAGGAGCAGGAGGAGACAGTGCGATGCCACCAAA GCCGAAATGAGTCCTCGTTGACGGCTGGGAGGGTATTGTCCGCTTCCTCT TTCGTGATGGAAAAGGGGCGGGGTGACAAGAATGAAGCAGGAGTAGGTGG GGCAGGGAAGGCAAGGGGAGGGATACCTCGCTTGGGACAGTCACCCAATG CCGAAGATGATGCGGCACTTGTTCGTCTCCTCGCAGGGCTTCAAAGGGAG GCTGATTACCTCACAAACAGGCACAGTACTAGCAGCAGTAGCAGCAGCAG CTGTGGTGATAGCCCTTTCATCACACCAGTGGGATCCCACCACTTCCAAG GCGCCCATCTGGAAGCCTTGGAAGCCCTCCTTGAGTCCAATGAAGGCACC GACATCGAACTCCACCCCTCCTTCCGCCCTTCCTCGTCCTCTTCCTTCAC TCCCTCCTCCTATCCCTCCTCCTCCACCACCGTCTTCCCCCCCCCATTGA CCCTCCATTCCAAAATCACCCGTCACGGAACCCGCATCTTTCGACCCAAA ACCCGAGTCCAGGTTCCCTGGTCCTACCCCGTCACACATGCCCTCGCCAC CTTCCTCTATACGGGCCGCCTCGTCGTCTCCACTGCCCACCTGGCCGACA CCTACCGCGCCGCGCAAGAGGCCGGGGTACGGTCTTTGGCCTACCTCCTA CGCACGCATCCTTTCTACGCCTTGCGCTTGACGAGTGCCGAAAAAGCGAG GTGAGGATGGAGAGGGAAAGAGGCGGAGGGGAAGGAGGAGACATCGGTCG TGTGTATTAAAGTGTGTGTATGTGCTTAAGCATGCATCTTGGATTTCTTT AATACGTCCTCTAACTCCCTCCCCGTCCCTTCCCTCGATCCCTCCCTCCC TCGATCCCTCCCTCGATCCCTCCCCCTCTCCCTCCAGCCACGTTCGCCGC TTCGCCGTAGTTTCCGGGAACGAAAGGCTCAGTGCCCTCTGCGATGCTTA CACGCGCCGGCTGGCCTCCCATAAAACCACATACACGCTGGTGGCCCCTG TGCCTTTTGCCTGGCTTCGGGCCCGCCCGCTTTTGATAGGGGACAAGGTC AGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG GGTGGTTCTTGTTACCGTGCTGTAAACAAGCGCATCGTTATTGATTCATC CTCCCCTCCCTTCCCTCCCTCCTACCGCCAGTCCCTCCTCCTCGCATTCA GCCACCGCCCTTCCCCCGTCCACGAAACGTCCAGCAATATCGTCCTCTCC ATACAAGATCACCTCCCCTCTTCCTCGCCCCCCTCCTCCCTCCCGCTTTC TCTTTGTCACAACACCTGCCTCCGCCTCGACAAGGACCCTTCCACCCCCT GGTCCCCGACCTGGTTCGCCGCCTCGTCTCCTCTCCCTCCCTCCCCCTCA CCCGCCTGTATGGAGGGTGACAAAAACGGACTTGTGTGGCTTTACGTCTT ATGCTCTCAGGCACATGCACCGGTCGTGCTCAAGGCGCTCCTCAGGTAGG GGAAAGGAGGGGATGAGGGAGGGAGGGAGGAAAGAGATAGACTGAGGGAG ACTTAATTAATCCATGAGAGGGGAGAAGAAAGCGAACAGCCTAGCTACAT GTCTGTACGTATGTGTACTTATTCATGCATGTCTTAACAGGGAGCTTAGC GTGTCCAAGGCACTGTGCGACGCCGAGCCCCAGGCAGGGGTTGAGGGAGG GAGGGAGGAAGCGGTAGAGGGAGGAGGAGGGGAGCGATCAGATTCAGTCT CGTCCACGGCATCGAGCGAGTCGTCTTTGGCTTCCTTCTCCTCCTACTCC TCCTCCTCTTCCGTTAGCAGTGAGGAAGGGGGAGAAGAAGATGGGGGGGG GAAGGGAACAATGATGAAGAGGGAATGGAGGCGGGGCAGGAGGAGGAAAA AGACGGGATGCAGGCGGCGGGAAATGAGATCGAGATGGAGGAGGGAGGGA GGAAGAGGGGGAAAGTGCGAGTGAAGAGTAGTCGAGGGATTATCTACAGC ATTCGTTTTGAAGAGCACAAAGTGTCCTCCCTCCCTTCTTCCTCCTCGCC GCATCACCGTCGTCATCACCACCACCACCACCACCACCACCACCACCACC TCAACAACAATAACAACAATATCAACAAGAAGAAGAACAGTTTCAAGGTT CTCTCGCTTTGGGCTTGGGGCGCTGCAACGAAGAAGGACGGAACGGATTA TGAAGACGAGGAAGGGAAGGAGGACGGGGAGGAAGAAGTCTTTGCTACCT TGGAAGCTTACATGCCGCAGATGCCAGTGGATACGTTTTCCTCCTCCTCT ACCACCACCATCAAAGCCACCCTCCGCGTTGTGGATCCCCCTCTGCCCCT CCTGGCCCACGTGCTGGCCGGGACAGATGCTGTGTCTGTCGACTGGGAGG TGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAAGGGTGCAGAGTTTAT CGATTTGAGCTTATTGACGGGGAGATACTGACATACACCAACATCTACAA ATAAACACAGGGAAATGCTCTCCTCCTCCCCCACCTGCCGCTGCCGACCC TTGAGGTCCTCCTCGTCCGCTTTCTCCTGCTGTCCTATTCCTCCCCCTCC TCTTCCTTATCCCTCTCTGTTTCCCTCCTCGAAAGGCATAAAAACAATTC AATTTCCAACGAGGATGAAAAAGGAGGGCTGGAGCAAGGAAATACCGGTG TGACCGGCCTTCTCCATCCCTCCCTCACCCTTGAACCGGAGGACGCCGAG GGGGAAATGGCCTTCTCCTTCAACAGGAGCAAGACTTCGAGATCCCGCTT GGAGAACAATCTAATTGAGGGAGGAAGAGAGGGCGGAGAGGAGGAGAGGA ATAATTATTATAGTCGTCATTGGCACCATATTCCTGCGCGGGAGATGAAA CGGTTGGTGCATGTGAAGGGGTGGGGAGGAGGGGGAGGGCGGGCTTAGGG ATCGCCTAGGAAGGAGGGGATATGGATATTTTTACATCAGAAGTCTGAAA TAGTGCGCGAAGAGTGGAGGAATCAAAAAGCGGGAAATGGCTGAAAAGCT TCGTAGACTCGTGGAAAAGAAGGAAGGAGTTAAGGTGATGGATGATGCTT AGAAATGAGAGAGGTGCCTTGGGAAGACACCTTATGAAAAAGCAAACTCA CGTGAATGGCAAGAAAGATACATAGATAGACAACTGATATGATAAGAAAT CGATTCTTCATCACTTAGATTTAAATCAGGCATCTAGAGGAAAGGGGGTA GAGATAAACCATTCACTTTTCGTTTTGACGTGGGTTTTTGAGCGTTCTCC GGGAAGAGTAGGGGAGTGAAGAGGAAGCCACTTGCACTTTCTGTACCACC AACAGTGAAAACAAGTCAATAGGGACTGACGGGAATCGGGAGAATTTTGA AATTTCTGACCATCCATATATTGACTGAGATCCCTTTTATATGAGGGGTG AAAGAGAAAAGAGCGATTTTTGATTGGGCCTCAAACTATCTCAAACGCCC CACTGCAAATAGGGACAAGGCCGTATCCGTTTGCGATGGTTTATGAGAGC CGATTTTGAAGTGATCTAAATTAAGTGCTCCGTAGCGGGCTTTTTGACAT TTCCAGTATCAACTTACCAAAAAAAGAAAATTAACAATTGATCGTTTACA TATTCCCGTGGCTTTTCTTTTTTTTCCAGGTCTTGTCTTGACTCCTCAAT TTGCAAATGTCCACTTGCTTGGCATCTTGCAAGCCAACTGAGTTTCTGAC CAGACATGCTCATATATTGTCTCTCCGAAAACTCATAAGCACAACATCAA TGAACACACAACTGAACCTTTCCCGTGTTGACTTTACCTGCTCAACAGAA TACCCCCGCTGATATCGTCCTGAGGAAGTGTGTCACTTCTTCTTATGTCG CCTACTGTTGGATTAGCGAAACATGAATTCCATATTACTTTCTCACAACA CGTCTTTCTCATTATTGCGTCCACAGGTCTAATATCTCAGCTACTCTGAT GCTTTTTGTGTATCAACTGCGGTGTTTTCCGTGTAAGCCTATATGCGGCT TTTATTGAATCTCTGGTGTTGTGTACGTACTTTCCTGGTTAATTTCTTTT GTATCACATGCTTCATAACTTACTTCTCCCACTGAGTCGTGGCCCAGATT CGAGACAAGGCTGGCGCATAGTTTACCCCATCCTTCAATAGCACTACCTT GACAAAAATCTAATGGTATTCAACGTCTTACTACCTTTCCGGATCTAGTA CATTGTTAACCAATGTTATCATTACGTGTCGACCATTGTTGGTCATGGCA AGAAAGCCTTACTAATTTAAAATCCTGAAATCAATTACTGTTAATTATGG CTCCCTTCGTCTTCCTCTATTTTCTTTTCCTCCTCCGTATTGAGCGCTTG TCGTTGCAACAATTCCCGCACCGTCCATGGTCCATTCTCTTCCTTTCGCA GCATTGTGCTCTTCCCAGCTCCCTCACCCTTGCCCAGCAACGCCGCCACA TGTCCCGCCGTCTCAACCAAAGGCAAAGCTACCCGGACACTAAATTTCTC CCATAGACCAAGGGCACACAGCGTCTTTTGGTCCAGCGATGTGGTAGCCA GCACTACCCCCACTCGGGACATTTTTGCAGGGGTACGACCGAGGACTGCA AGGAGGCTATGAAGACGTGGCAAAGAAACTCGACCGCCTTGTAGCGGCAC GTACTGCGAAAGGCCCTCCAAGTCGTCCAGCATCAGCAGGGAATGTGGGC ATTGGTGCGCATCCTGTACAGCTTGGGCTAGTGTGTCGCATGCGGCTTCT TCTCCCAAGCTCGCAAGTTCTTGCCCCGTGAGATGTCGACGAAAGGTAAA CCCGCCGGCCAAGGAGCCAAGGTGAGCAAGCACAGCCGACTTCCCTGCGC CGGGAGGGCCTTGAAGAAGAATCGTCACAAGGGGCAGCTGGCCACCGTTA CGAGCTTGATCGAGGGTAGTTAGTAGGCCCTGGACGAGGGTCGGTACCTC GGGGCGGAAGGCCACAAACCCCATGCGTTGGTGCGTGGCCCACTGCTGGC TCGCAGCGCCAAAGTGGGGCTTTGCTTCGCGGAGCGCCCGCAGCAAGTCA AGCATACACAAGTTCAATTTCGACGATGATAAGTCGCTTTTAATTACATC AGCATCCAGCACATCATGCTTACGACTGACCTGTCGCTGTAAGGCAAAAG ACAAGCCTCCCTTGACGACGCCCTCGATCTCCGCGCCAGTAAAATTAGGC GTCAATCGTGCGAGCTGGTGGAAGTCTACGTCGGCGGACAAGCAACCCTC GTTGGCAAAACCCCGGGTATGAATATGAAATATCTGTGCCCGGCCTGCTT CGTCGGGTAGACCAACCTCCACATGGACCTCAAGACGGCCTGGGCGTAAG AGTGCGTCATCCAGGAGGTCTTTCCGGTTGGTGGTGCCGATGCACAATAT GTTGTCAAAGGCCGCCAACCCGTCGATCTTGGAAAGAAGCTGGTTAACGC AGCTGTCCAGAACTCCCGACGAATCCCGCAGCGTCCCCCGCTTTCGCGTC AAGGCGTCTATCTCGTCAAATATGATTACGTGCAAGGCCGAGGCGCTGCC TTTCTCCTTGAATTCTTGTTCAGCGTCCTGGAAAATGGCCCGGATATTCT CTTCGCTCTTACCCACCCACATGGACAGAAGCTCTGGCCCAGAAATGAGT TTAGGTTTAGCAGCATGCAGTAATGCGGCGAGTTGACGTGCCACGAGCGT CTTACCCGTGCCTGGTGGCCCGTGTAACAAAATGCCCCGGACGTGCTTGA CGCCAAGTCGCTTGGCCATGTCCGGAGACAGGAGGCGCGATGCCAAGGCC CGGCGCAGCAAGGTTATAACGGGGCCATCCAGGCCACCAATGTCCAGCTG ATGTAGGAGTGCAGATGTGTTCTTGGAGGCAGAGTTGGTAGTGATTGCGG CTTCGGTATCCTCACCTTCATTCATGAGAAGCTCGCGCAGGAGGGCCAGG GATGTGTTCGGTGTCGGAGAAGTGGGAGTTTGGGGAGCTTGGGGTGTACG AGCCATGGCATGTTTGCCGCGTGCCATGATTATTCGATAGAGAAAGTTTG CTGTGCTGGTATCAGTGTGTGGGGGAAGAGGGTAAGGGCGTCGTCGAATA AGGAGGAGGTTGTGGGAGTGATGAAAGCGCTTCGTGCAGAAGATCGAGAA CAATGCAAGATGGAAAGTGCAAGAGAGAAGTATCTTGTGTGTTGTTGACA ATGCCTGCATTAAATACATGCACGAGGCTTCTTAGATGGAGGAAAGTGGG GCGCGTACATCGTCGCCGGAAAAGTGAGGTTGAGACAGAGGCGTTTGGTA CGAGGGAGGAGAAAGGGGTGATGATGGTTGGATTATCGTGCTGCAATATT ATTTCTTAATAGGTTTAACACCAACCAGGACATTGAATTAAAATGCAGGA GACTTGACGCTAAGGGAGCCAAGAAACTCGCACCGAACAAAACGCCGCCG GACAAGAGGCAAACGTAAAGCGTATGCTCTTCTGCTGCTGCTAAATTGCA TGGATGATTCAGTGAAAGAGCGTGGACAGAGGGTTGAAAATGCTGTCAAG GCCCAAG
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Coding sequence (CDS) from alignment at chr3:1587797..1595053+

>NO03G05540.1 ID=NO03G05540.1|Name=NO03G05540.1|organism=Nannochloropsis oceanica|type=CDS|length=1668bp|location=Sequence derived from alignment at chr3:1587797..1595053+ (Nannochloropsis oceanica)
ATGCACGCGGGTCGCATCCTTTCCATCTCTGTGCCCAATGGTAGTAGCGT
GCCGGACGTCTCCTTTTCCTTCCATCATCAACGGCAGCAGCAGCAACAGC
AACAGCAACAACAGGAAAGCCGGGCGGAGGAGCAGGAGGAGACAGTGCGA
TGCCACCAAAGCCGAAATGAGTCCTCGTTGACGGCTGGGAGGGTATTGTC
CGCTTCCTCTTTCGTGATGGAAAAGGGGCGGGGTGACAAGAATGAAGCAG
GAGTAGGTGGGGCAGGGAAGGCAAGGGGAGGGATACCTCGCTTGGGACAG
TCACCCAATGCCGAAGATGATGCGGCACTTGTTCGTCTCCTCGCAGGGCT
TCAAAGGGAGGCTGATTACCTCACAAACAGGCACAGTACTAGCAGCAGTA
GCAGCAGCAGCTGTGGTGATAGCCCTTTCATCACACCAGTGGGATCCCAC
CACTTCCAAGGCGCCCATCTGGAAGCCTTGGAAGCCCTCCTTGAGTCCAA
TGAAGGCACCGACATCGAACTCCACCCCTCCTTCCGCCCTTCCTCGTCCT
CTTCCTTCACTCCCTCCTCCTATCCCTCCTCCTCCACCACCGTCTTCCCC
CCCCCATTGACCCTCCATTCCAAAATCACCCGTCACGGAACCCGCATCTT
TCGACCCAAAACCCGAGTCCAGGTTCCCTGGTCCTACCCCGTCACACATG
CCCTCGCCACCTTCCTCTATACGGGCCGCCTCGTCGTCTCCACTGCCCAC
CTGGCCGACACCTACCGCGCCGCGCAAGAGGCCGGGGTACGGTCTTTGGC
CTACCTCCTACGCACGCATCCTTTCTACGCCTTGCGCTTGACGAGTGCCG
AAAAAGCGAGCCACGTTCGCCGCTTCGCCGTAGTTTCCGGGAACGAAAGG
CTCAGTGCCCTCTGCGATGCTTACACGCGCCGGCTGGCCTCCCATAAAAC
CACATACACGCTGGTGGCCCCTGTGCCTTTTGCCTGGCTTCGGGCCCGCC
CGCTTTTGATAGGGGACAAGTCCCTCCTCCTCGCATTCAGCCACCGCCCT
TCCCCCGTCCACGAAACGTCCAGCAATATCGTCCTCTCCATACAAGATCA
CCTCCCCTCTTCCTCGCCCCCCTCCTCCCTCCCGCTTTCTCTTTGTCACA
ACACCTGCCTCCGCCTCGACAAGGACCCTTCCACCCCCTGGTCCCCGACC
TGGTTCGCCGCCTCGTCTCCTCTCCCTCCCTCCCCCTCACCCGCCTGTAT
GGAGGGTGACAAAAACGGACTTGTGTGGCTTTACGTCTTATGCTCTCAGG
CACATGCACCGGTCGTGCTCAAGGCGCTCCTCAGGGAGCTTAGCGTGTCC
AAGGCACTGTGCGACGCCGAGCCCCAGGCAGGGGTTGAGGGAGGGAGGGA
GGAAGCGGTAGAGGGAGGAGGAGGGGAGCGATCAGATTCAGTCTCGTCCA
CGGCATCGAGCGAGTCGTCTTTGGCTTCCTTCTCCTCCTACTCCTCCTCC
TCTTCCGTTAGCAGTGAGGAAGGGGGAGAAGAAGATGGGGGGGGGAAGGG
AACAATGATGAAGAGGGAATGGAGGCGGGGCAGGAGGAGGAAAAAGACGG
GATGCAGGCGGCGGGAAATGAGATCGAGATGGAGGAGGGAGGGAGGAAGA
GGGGGAAAGTGCGAGTGA
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Synonyms
Publications