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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr3 | genome | chr3:1572032..1574960 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G05480.1 ID=NO03G05480.1|Name=NO03G05480.1|organism=Nannochloropsis oceanica|type=mRNA|length=2517bp AGGTTCGCTGGGCGACTACTGGATAGAGCACCACCATCGTGGAGCGCCGT GAACCGGTGCTGTGCCATGGCGGCTCACTTTCACGCCAGGCTCCCGAGCG GTGCTTCCACGCTGGGAGGGGCGCTCTACATGGCGGCAACGGCGATGGAG TCGATCAGTGGCGAAGTCCATGCTTGTTCAGACTTGAAGCGGTACGTGGG AGTCACCAAGCGATTGCGGAATCGGAGCGCTTGCGCTGTGTGCTCCCAAG CCAAGGTAAAAGAAGTTAGAGGGGAGAAGGTTTCACAACGTTCACGACGA GAGGGCGGGTGGATGAAAGGGTCTTTTATTAGTTGCGCGGGACAAGGCTT GTGTCTTTTTCACTTTCTTTCTCACGCACCACCTGACATGCCTACACCCA TGTATGCGCTGTCGATTGCTCTCACTTATCCATCCTTGTCCATTACCACC GTACTCATTTTTTCAAATCAATAGGTGCGCTGCGATGGGAATATCCCCTG TTCCCGCTGCCTTCGCCTGTCCCACCCTTGTCGCCCTCAAAGTCCACTAA TCCAAGCCGAGCCCACCACCACATTGCTCGACATCGCCTTCCAGCAGGTG CAGTCTCAAGAGATCGGTGAATCGTACATGGACGTGTTCAGAAGAGTCAG CCGGGACTTTCTGCTCGACCGAGAAAGTGTCTACGCCGTGCTTCGAACCT GGATGAGACTGTCCGAATTGGCGGGCAGAGATGTCAGTTGGACGGTAGGC GATTCAATCCTCAAGACCCTTCGGTCCACGGGGATGAATGGGGGAAGGGG GCGAGGAGAGGAGCTGGTGTGTCAGCAGTGGAAGGGGGGGAGGGCGCGCG CGGACGCAGTGCAGGCAAGGTCGAGGGAGGCGAGTGAATTTCTGAAGCGT AGTGAGAGTTTTCGATATGAGGATGACAGCATCTCGCCCATGTGCATGTT TATATATACCTCCCTCCCTCCCTGTGGGTCCAGCGGCAATAAGGGGGCAC CATCAGCTGCACCCATGTCCGAGGACGACGAGCTGTTCATGGTCACTGCC TGCAACGACTCCTTTTACAAGGCCTTTACCACGATGCGCACTACGGCAGG AGGGAGGGAGGGCGGGCTGTCGCCCACCATGTTCGACGAGGCCGATGTGC TTGAGTACAAGACAAGCTTTTTTTTCCTCCTGGCGTCGCTAGTGCGACAG GTAGACCGAGCGATCTTCTTACAGTTGCTGCTGGAGGGGCTCCACATACT CTCGATCCATAAACGAGTCGAATTTGTCAAGATGTACAACGCGGAGGGCC TCGTCCACACGTACATCGTCAGTAGCAAGAAAGTTTGGTTGAGGGAGGGA GGGAGGGAGGGGGCGATGGGGGGGTTATATGCGCATGTGTTAAAACTCGA AGTGGCGCCTATCAGTAAGCATTTGAGAAAGAATGCAGGGCGAAAGGCGT TGCTGGGGGAGAGGGGTATCAAAAGGAGTCGAATTGCAGAGGGGCGAGCA GAAGCGGACGAGATGGACAAGGACGGTGGAGGAGAGATGACAGAAGAAGC AGGATCTTTACGTTCTCCATCTGCGGCGGGCTCTATGTTTCTAAAACAGT CTATAGTGCCCTTGCAGATCTTGCGAGCCGGACAGATGGCAGAAACTCGG GCGATAGGCGACCACAAGATCGGTATGGGGGGCGGGGGGGAAGAATGGAG AGGAGAGAGCAAGTGCACAAGTGATTGCAACGAGAAGGTATCCACTTTTG GGATGCACGGGATGAGTCTCATGTCATTACCTTTGCCGGCGCTGCAACGT AAACATTTTGACGAAATTGTTGCGTACATGCAGCGGGGGGGGGGCAACAT GTTTGCCATTCCCGACCGCTCCGTGTGGTTTAATGAAGGAGGGGGCGGTG TGCCTGAGCACTTGCACCTGCATCAACGGCTGCTGCGGAGGGGCAAGAAC AGGATGCAAGTGTCTTTAGCTGCTTACAGGGGAATGAAAAGCCGCCAGGG TTTCTGGAAGGTACCGTCGAATGCGGAGGGAAAGGACGAGTCAAATGAGC AGGAATGGCGACAGATCGAGAAAGGGCAGGTGGGCCAAGACCACCACCAC CACCACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTACAGCA CAAGTATGGACAGCAACAGCAAGTGAAGAGACACAGGCATAACCAGCTGT GGCAGCAGCAACTGCAGCAACACCAGCAGCCTGCTTCGATACCCTCCGCG CGTATACCTGCTGTGGTGGGACCACTGGGGTCGTGTTCCCCTTTGTCTCC GCTTTCTGTCCCCTCCTCCTTTTCCGTCCATGAGTCTACGCCGCCTATTT CTTATTCTATCTCTTCCCGCTGTCCTTCCCCCTCGTCATGCAACTTCCAT GTCTCCTGCCTCTTGTCCTCGCGCCGCTCTTCCCCCTACTCCTCCTGCTC GCCTGTCTGCGGTGCTTGTGGCCACAATTTCCCTGCCAACAACAATGACA GCTCTTGGGCTGTCTAA back to topprotein sequence of NO03G05480.1 >NO03G05480.1-protein ID=NO03G05480.1-protein|Name=NO03G05480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=630bp MDVFRRVSRDFLLDRESVYAVLRTWMRLSELAGRDVSWTVGDSILKTLRS TGMNGGRGRGEELVCQQWKGGRARADAVQARSREASEFLKRSESFRYEDD SISPMCMFIYTSLPPCGSSGNKGAPSAAPMSEDDELFMVTACNDSFYKAF TTMRTTAGGREGGLSPTMFDEADVLEYKTSFFFLLASLVRQVDRAIFLQL LLEGLHILSIHKRVEFVKMYNAEGLVHTYIVSSKKVWLREGGREGAMGGL YAHVLKLEVAPISKHLRKNAGRKALLGERGIKRSRIAEGRAEADEMDKDG GGEMTEEAGSLRSPSAAGSMFLKQSIVPLQILRAGQMAETRAIGDHKIGM GGGGEEWRGESKCTSDCNEKVSTFGMHGMSLMSLPLPALQRKHFDEIVAY MQRGGGNMFAIPDRSVWFNEGGGGVPEHLHLHQRLLRRGKNRMQVSLAAY RGMKSRQGFWKVPSNAEGKDESNEQEWRQIEKGQVGQDHHHHHHQQQQQQ QQQQQLQHKYGQQQQVKRHRHNQLWQQQLQQHQQPASIPSARIPAVVGPL GSCSPLSPLSVPSSFSVHESTPPISYSISSRCPSPSSCNFHVSCLLSSRR SSPYSSCSPVCGACGHNFPANNNDSSWAV* back to topmRNA from alignment at chr3:1572032..1574960+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G05480.1 ID=NO03G05480.1|Name=NO03G05480.1|organism=Nannochloropsis oceanica|type=mRNA|length=2929bp|location=Sequence derived from alignment at chr3:1572032..1574960+ (Nannochloropsis oceanica) AGGTTCGCTGGGCGACTACTGGATAGAGCACCACCATCGTGGAGCGCCGT
GAACCGGTGCTGTGCCATGGCGGCTCACTTTCACGCCAGGCTCCCGAGCG
GTGCTTCCACGCTGGGAGGGGCGCTCTACATGGCGGCAACGGCGATGGAG
TCGATCAGTGGCGAAGTCCATGCTTGTTCAGACTTGAAGCGGTACGTGGG
AGTCACCAAGCGATTGCGGAATCGGAGCGCTTGCGCTGTGTGCTCCCAAG
CCAAGGTAAAAGAAGTTAGAGGGGAGAAGGTTTCACAACGTTCACGACGA
GAGGGCGGGTGGATGAAAGGGTCTTTTATTAGTTGCGCGGGACAAGGCTT
GTGTCTTTTTCACTTTCTTTCTCACGCACCACCTGACATGCCTACACCCA
TGTATGCGCTGTCGATTGCTCTCACTTATCCATCCTTGTCCATTACCACC
GTACTCATTTTTTCAAATCAATAGGTGCGCTGCGATGGGAATATCCCCTG
TTCCCGCTGCCTTCGCCTGTCCCACCCTTGTCGCCCTCAAAGTCCACTAA
TCCAAGCCGAGCCCACCACCACATTGCTCGACATCGCCTTCCAGCAGGTG
CAGTCTCAAGAGGTAAGCTATCAACATGATAGAGTCATTCATTTTGGCAG
AACAGATCAGTCATGCTGAAGCGCTCTTTCCTCGCACGGCTGCAGTGAGT
GACTTCTTATTCTTTTTCTTTTTCTCATTCTTATTCTAACTCACTCTTAT
TCTTATCCTTATCCTTGATCTTTTTCATGGCATGTTTAAGGCCAACAATC
CCTTCCTCCCTCCCTCCTTCCTTCCCTCCATCCCTTCCGCATACTTTCCG
CAGCCTTGCTAAATCCCCCCCTGCTCGCTTTCCCTTCCTCTTCCTTTTTT
CCCATCCCCTCTCCACAAGCGCGTACCAACAACTCAGAGCCTGAATGTGT
ACCCCTTAATCACAGTCTCAAGCTTCAACCTGACCCTCTTCTGTCCCCCC
ATTAATCCATCTCTCCCTCCCTAGATCGGTGAATCGTACATGGACGTGTT
CAGAAGAGTCAGCCGGGACTTTCTGCTCGACCGAGAAAGTGTCTACGCCG
TGCTTCGAACCTGGATGAGACTGTCCGAATTGGCGGGCAGAGATGTCAGT
TGGACGGTAGGCGATTCAATCCTCAAGACCCTTCGGTCCACGGGGATGAA
TGGGGGAAGGGGGCGAGGAGAGGAGCTGGTGTGTCAGCAGTGGAAGGGGG
GGAGGGCGCGCGCGGACGCAGTGCAGGCAAGGTCGAGGGAGGCGAGTGAA
TTTCTGAAGCGTAGTGAGAGTTTTCGATATGAGGATGACAGCATCTCGCC
CATGTGCATGTTTATATATACCTCCCTCCCTCCCTGTGGGTCCAGCGGCA
ATAAGGGGGCACCATCAGCTGCACCCATGTCCGAGGACGACGAGCTGTTC
ATGGTCACTGCCTGCAACGACTCCTTTTACAAGGCCTTTACCACGATGCG
CACTACGGCAGGAGGGAGGGAGGGCGGGCTGTCGCCCACCATGTTCGACG
AGGCCGATGTGCTTGAGTACAAGACAAGCTTTTTTTTCCTCCTGGCGTCG
CTAGTGCGACAGGTAGACCGAGCGATCTTCTTACAGTTGCTGCTGGAGGG
GCTCCACATACTCTCGATCCATAAACGAGTCGAATTTGTCAAGATGTACA
ACGCGGAGGGCCTCGTCCACACGTACATCGTCAGTAGCAAGAAAGTTTGG
TTGAGGGAGGGAGGGAGGGAGGGGGCGATGGGGGGGTTATATGCGCATGT
GTTAAAACTCGAAGTGGCGCCTATCAGTAAGCATTTGAGAAAGAATGCAG
GGCGAAAGGCGTTGCTGGGGGAGAGGGGTATCAAAAGGAGTCGAATTGCA
GAGGGGCGAGCAGAAGCGGACGAGATGGACAAGGACGGTGGAGGAGAGAT
GACAGAAGAAGCAGGATCTTTACGTTCTCCATCTGCGGCGGGCTCTATGT
TTCTAAAACAGTCTATAGTGCCCTTGCAGATCTTGCGAGCCGGACAGATG
GCAGAAACTCGGGCGATAGGCGACCACAAGATCGGTATGGGGGGCGGGGG
GGAAGAATGGAGAGGAGAGAGCAAGTGCACAAGTGATTGCAACGAGAAGG
TATCCACTTTTGGGATGCACGGGATGAGTCTCATGTCATTACCTTTGCCG
GCGCTGCAACGTAAACATTTTGACGAAATTGTTGCGTACATGCAGCGGGG
GGGGGGCAACATGTTTGCCATTCCCGACCGCTCCGTGTGGTTTAATGAAG
GAGGGGGCGGTGTGCCTGAGCACTTGCACCTGCATCAACGGCTGCTGCGG
AGGGGCAAGAACAGGATGCAAGTGTCTTTAGCTGCTTACAGGGGAATGAA
AAGCCGCCAGGGTTTCTGGAAGGTACCGTCGAATGCGGAGGGAAAGGACG
AGTCAAATGAGCAGGAATGGCGACAGATCGAGAAAGGGCAGGTGGGCCAA
GACCACCACCACCACCACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAACTACAGCACAAGTATGGACAGCAACAGCAAGTGAAGAGACACAGGC
ATAACCAGCTGTGGCAGCAGCAACTGCAGCAACACCAGCAGCCTGCTTCG
ATACCCTCCGCGCGTATACCTGCTGTGGTGGGACCACTGGGGTCGTGTTC
CCCTTTGTCTCCGCTTTCTGTCCCCTCCTCCTTTTCCGTCCATGAGTCTA
CGCCGCCTATTTCTTATTCTATCTCTTCCCGCTGTCCTTCCCCCTCGTCA
TGCAACTTCCATGTCTCCTGCCTCTTGTCCTCGCGCCGCTCTTCCCCCTA
CTCCTCCTGCTCGCCTGTCTGCGGTGCTTGTGGCCACAATTTCCCTGCCA
ACAACAATGACAGCTCTTGGGCTGTCTAA back to topCoding sequence (CDS) from alignment at chr3:1572032..1574960+ >NO03G05480.1 ID=NO03G05480.1|Name=NO03G05480.1|organism=Nannochloropsis oceanica|type=CDS|length=1890bp|location=Sequence derived from alignment at chr3:1572032..1574960+ (Nannochloropsis oceanica) ATGGACGTGTTCAGAAGAGTCAGCCGGGACTTTCTGCTCGACCGAGAAAG TGTCTACGCCGTGCTTCGAACCTGGATGAGACTGTCCGAATTGGCGGGCA GAGATGTCAGTTGGACGGTAGGCGATTCAATCCTCAAGACCCTTCGGTCC ACGGGGATGAATGGGGGAAGGGGGCGAGGAGAGGAGCTGGTGTGTCAGCA GTGGAAGGGGGGGAGGGCGCGCGCGGACGCAGTGCAGGCAAGGTCGAGGG AGGCGAGTGAATTTCTGAAGCGTAGTGAGAGTTTTCGATATGAGGATGAC AGCATCTCGCCCATGTGCATGTTTATATATACCTCCCTCCCTCCCTGTGG GTCCAGCGGCAATAAGGGGGCACCATCAGCTGCACCCATGTCCGAGGACG ACGAGCTGTTCATGGTCACTGCCTGCAACGACTCCTTTTACAAGGCCTTT ACCACGATGCGCACTACGGCAGGAGGGAGGGAGGGCGGGCTGTCGCCCAC CATGTTCGACGAGGCCGATGTGCTTGAGTACAAGACAAGCTTTTTTTTCC TCCTGGCGTCGCTAGTGCGACAGGTAGACCGAGCGATCTTCTTACAGTTG CTGCTGGAGGGGCTCCACATACTCTCGATCCATAAACGAGTCGAATTTGT CAAGATGTACAACGCGGAGGGCCTCGTCCACACGTACATCGTCAGTAGCA AGAAAGTTTGGTTGAGGGAGGGAGGGAGGGAGGGGGCGATGGGGGGGTTA TATGCGCATGTGTTAAAACTCGAAGTGGCGCCTATCAGTAAGCATTTGAG AAAGAATGCAGGGCGAAAGGCGTTGCTGGGGGAGAGGGGTATCAAAAGGA GTCGAATTGCAGAGGGGCGAGCAGAAGCGGACGAGATGGACAAGGACGGT GGAGGAGAGATGACAGAAGAAGCAGGATCTTTACGTTCTCCATCTGCGGC GGGCTCTATGTTTCTAAAACAGTCTATAGTGCCCTTGCAGATCTTGCGAG CCGGACAGATGGCAGAAACTCGGGCGATAGGCGACCACAAGATCGGTATG GGGGGCGGGGGGGAAGAATGGAGAGGAGAGAGCAAGTGCACAAGTGATTG CAACGAGAAGGTATCCACTTTTGGGATGCACGGGATGAGTCTCATGTCAT TACCTTTGCCGGCGCTGCAACGTAAACATTTTGACGAAATTGTTGCGTAC ATGCAGCGGGGGGGGGGCAACATGTTTGCCATTCCCGACCGCTCCGTGTG GTTTAATGAAGGAGGGGGCGGTGTGCCTGAGCACTTGCACCTGCATCAAC GGCTGCTGCGGAGGGGCAAGAACAGGATGCAAGTGTCTTTAGCTGCTTAC AGGGGAATGAAAAGCCGCCAGGGTTTCTGGAAGGTACCGTCGAATGCGGA GGGAAAGGACGAGTCAAATGAGCAGGAATGGCGACAGATCGAGAAAGGGC AGGTGGGCCAAGACCACCACCACCACCACCACCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAACTACAGCACAAGTATGGACAGCAACAGCAAGTGAA GAGACACAGGCATAACCAGCTGTGGCAGCAGCAACTGCAGCAACACCAGC AGCCTGCTTCGATACCCTCCGCGCGTATACCTGCTGTGGTGGGACCACTG GGGTCGTGTTCCCCTTTGTCTCCGCTTTCTGTCCCCTCCTCCTTTTCCGT CCATGAGTCTACGCCGCCTATTTCTTATTCTATCTCTTCCCGCTGTCCTT CCCCCTCGTCATGCAACTTCCATGTCTCCTGCCTCTTGTCCTCGCGCCGC TCTTCCCCCTACTCCTCCTGCTCGCCTGTCTGCGGTGCTTGTGGCCACAA TTTCCCTGCCAACAACAATGACAGCTCTTGGGCTGTCTAA back to top
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