NO03G05360.1, NO03G05360.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G05360.1
Unique NameNO03G05360.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4111
Alignment locationchr3:1530006..1534116 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1530006..1534116 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO03G05360.1 vs.
Match: EWM29994.1 (exportin 4, partial [Nannochloropsis gaditana])

HSP 1 Score: 736.5 bits (1900), Expect = 1.500e-208
Identity = 398/644 (61.80%), Postives = 485/644 (75.31%), Query Frame = 0
Query:  703 SLSFSSSPSPESTSALLLETCGQVHLLATFLLQRVIHDPNDPILSPYLTEAVLWFLTRWARTYVLPDTRLYRNGILAPSLLQAFGGEAGQQQVDGLLRLAWGFLTHWHSESDVAEAAIGLLRAVLLVGGGASGPAALRCDTWKVILAAMEAEGAMLLQQQSQQQQQHQDGHGYGHGQLHQQQQQHPPHIPPELGYIRLRPNVRGELLEVIVGGVLSHENDPEAPRALMQVANPLETRLQHLLLKLSSAAATASMKGNATAATAAARARAALAQEVGEVAGLYAGLAKAVDHSGQALLACLVTRALEPLVGAATQCGPYPETMHAVLEFLRNYAEVHISSLGAEATMALLTAAGQALKAYAAHNLGRTRKDANSKEEAVADMLCVLELLSYLATKDFIDFSAEHEGKVAADAVADVVFFGLERMIPLMTEEYLDFPPLGKQYFTLVNSMVSTYTGRVALLPHPLFMQLVQSVMFGVQRPDSEIARDSLRALAGLASFHAKA----CQEAQNGGGGRAGLGVHVAAHPGLLSDCMHKLLHMVVYEGSIWDRLDAASSALLALVLCDRDAFLRMVHGILEQQPPGVKGRLRHEFEEMVKAIPPPQVPPAG-GGGKGRGMITDRQTKLAFRDRLKEFAKRVRPFMQMR 1342
            SL  ++S  P + +ALL++ C  +  LA FLLQR +  P+DP LSPYLTE +L F+ R+ARTY+LPD  LYRNGILAP+L+QAFGGEAG+ QV+  LR+AWGFLT W S+ +VA+AAI ++RAV+L GG   G AA+R + WK++L  MEAE   L Q   Q     Q+GHG+             P IPPELGY+RL  ++RGELLEV+VGG+L+ END EA + + QVA P+ETRL  L + L  +   + +             R+ L +EVG VAGLYAG+A+AVD++GQA L  L+T ALEPL+  AT C  YP+ +HAVL FLR+YAEV ISSLGA ATM+LLTA GQALKAYA+HN+GRTRKDANSKEEAV D+LCVLELLS++A+KDF+DFSAE EGK+AAD VADVVFFGLER+IPLM+EE L++PPLGKQYFTLVNSMVSTYT RVA LPHPLFMQL+QSVMFGVQRPDSEIARDSLRALAGLASFHA+      + A +  GG  GL  HV AHP L S+C  KLLH+VVYEGS+WDRLDAAS+ALLAL+LCDR+AFL ++ GILE+QPP VK RL  EF++++ AIPP      G  GG+ RG   DRQTKLAFR  L+ FA +VRPFMQMR
Sbjct:    3 SLLPATSLPPSTAAALLVDACTHLQHLAGFLLQRAVEVPDDPFLSPYLTETILSFVARFARTYLLPDPSLYRNGILAPTLVQAFGGEAGEGQVEQSLRIAWGFLTRWPSQREVAKAAIAVVRAVVLTGGEPLGRAAVRSEAWKMMLRDMEAEKHFLRQHGEQLVGNGQEGHGHAPSP--------SPQIPPELGYLRLASDLRGELLEVVVGGILARENDAEASQGIAQVAGPVETRLHFLYMGLKGSNGKSGV------------GRSGLVREVGVVAGLYAGMARAVDNTGQAYLPRLITHALEPLLDVATLCSAYPDALHAVLLFLRDYAEVQISSLGAPATMSLLTATGQALKAYASHNVGRTRKDANSKEEAVGDILCVLELLSHVASKDFVDFSAEQEGKLAADTVADVVFFGLERLIPLMSEELLEYPPLGKQYFTLVNSMVSTYTERVAFLPHPLFMQLLQSVMFGVQRPDSEIARDSLRALAGLASFHAQTVGSRVRSAGHANGGGRGLEAHVTAHPALFSECTRKLLHLVVYEGSVWDRLDAASNALLALILCDREAFLCLLAGILEEQPPSVKERLGQEFQKLMSAIPPRMEGGDGREGGRRRGPAWDRQTKLAFRHHLRAFATQVRPFMQMR 626          
The following BLAST results are available for this feature:
BLAST of NO03G05360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29994.11.500e-20861.80exportin 4, partial [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G05360NO03G05360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G05360.1NO03G05360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G05360.1.cds1NO03G05360.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G05360.1 ID=NO03G05360.1|Name=NO03G05360.1|organism=Nannochloropsis oceanica|type=mRNA|length=4111bp
ATGGATGCCGCCCTCCAACACGTCGAACATACTTGTGCCCTCCTCCAATC
CGACCCCATGGGGGCCGGGCAAATTCTCCTCGCCCTCCGCAGCGACCCCG
AGGCAGTCTCCATCGCTCGCCATGTCCTGGAGCACTCCACAATGCCCGCT
GCCCACTTCCATGCCACTGGCATCCTCCAAGCCGCTTTACTCGGACGTTG
GACAGAGTTGCCTCTGGATGAGCGGGCGGCGGCACGAAATTACCTGGCGA
CCTTGCTATTGACGCATGGCGATCGATATGCCTCCTTTGTGACCTCTCAG
CTCTTGCAGACGTTTGCCGTGCTCTGGAAACGTGGCTGGGCCGAAGAGGG
AGCGGAGGGCAAGACACGCTTCTTTCAGCAGGTCCAAGCTTTGACACAGC
AAGCAAAACAAGGGCAGGACCATCACCACCAGCAAAATTGTAATGGAGGA
GCAGCAGAGGGAGCAGGACAGGATGAAATTGTGTTGGCAAGCAAATTTAT
CCTGGCCTTAGTCGGGGAGTTTAGCACTGCCAAGTCAGCAGCGTTGGGTC
TACCATTGGAATTTCATCGGCAGGCGCACAAGGCGTTCGAGACGTATGGA
CTCTTGCCGTGCTTGGAGCTGGGGATAGGGATGATGGCTGATGTAGTGGA
CGGGGTATTGGGTGTGACAACGCCTGCCGGTGGAGAGGGAGGAGCAGCAG
CAGCAGCTATTGCGGGGGAAAGAGCAGAATTGATTCTGGGGAGGCTCGAC
GCCGTCGTCCAGCTGTGCGTGGAAATTCTGTCGTGGGACTTCGGAGGCTT
TGATCCTCTGCACGAGCCTTCCTCCACTGCGCCCTCCTTCATCTCGCCCC
CCATCACCTGGCGTCCCTTCCTCCTCAAGCTAGAGCTTTTCGAAGCCTTA
ATCGAAGTCTACATTCGCATCCGTTCCTTCCGCATTTCTGGTGTCCACCA
ACGCGAGCAAGAAGCAAGGACCCATGCACTAAGGCAGCTTCTCACCCAGC
TCGCTTCTTTGCAGGGTCCGATTTTCCCCAACGGGCAAGAACGGGGGCTG
TACGCAGCTTTCTTGGTCAGGGCAGGCGTAGAATTGCTCTCGCAAAGTAT
GGAGGGCGCCATGGCTGCCGTGGGTGGAGTGTCAGCAGCGGGGAGAGCGG
AGGAGATGGAGAAGTTCGGGCCAGAGATTGTGGCCCTGGCTTCCTTTTTG
CAGGTGTGTGTGAGCAATTTCCGCTTGCCTGTGTTGGCGACTTTTTCTTT
TTTCCCCGACTTCTGTCGACGGTTGAGTGAGGTCGCGTGTCGGTTACTGA
GTGTAACGGCTGGGATGGCGTTGGAGTTCAGAGGGGCGGATGGCGATTGG
ACGGAAGTGTGTGAAGAGGGGTGGGCTATGGAGGCGTTTGAGGTGCTGTT
GGAGACATGGGGTGTGATGGTAGGGGAGCCAGGGTTGGATCTGTTGGGGG
GAGGGGGAGGAGACAACAGCCCGCCGTTGGGGCCGGTGGGGGTGGGCGGG
GGGGAGGGAGGGGGGAAGTTGGATGGGAGTTATGGTAAGGGAGGGAGGGA
GTATGATGTGGTGGCTACAAGGAGGGTGATTGTGGAGGCGGCGACACCCA
TGTACCAGGCCTATCAAACGTGCCGTGTGACCTTGTCGCGGGTCGAAGCA
GCACGATCTGTGGCGGTGGAAGAGGACGAGGACGAGGTGGCTATAGCGGA
AATGGGCACCCAGGAGCAGGTGACTGGTGTGGCGGCCATAGGTCGCTTGG
CACCGGCCACGGCCTTGGCGTTTTTGAAGCATCTGTTGCTCGATCCCCCG
GGGGAGGGAGGGACGGAGGGAGGGGGGAAAGGCGGGTGTTTCCCGCGGTT
GCATTTGCTGTTGACTGCGGGAGGAGGAGAAGAAGTCGGGAGCGGGGAAG
GGATGGATCGGAGTTCAACGGGCGTGGCGGCCTTGATGGAGGAAGTGCGG
GTGCTGGTGCAAGGACTCGGCTTTTTAATTGCCGACGATTTCTCCGGGGA
ACAGCCCGCTATCCCCGAATCCATTCACCGTCTTTGCTTCCAAAGCTCCT
CCTACTCTTCGCCTCCCTTACTCGCATCCTCTTCCCTGTCCTCCTCCTCC
ACATCCTCCCTGTCCTTCTCCTCCTCCCCTTCTCCCGAGAGCACCTCGGC
CCTCCTCCTAGAAACCTGCGGACAGGTCCACCTCCTTGCCACTTTCCTCC
TTCAACGCGTCATCCACGACCCGAACGACCCCATTCTCTCCCCCTATCTC
ACCGAAGCGGTGCTCTGGTTCTTGACCCGCTGGGCACGAACGTACGTCCT
GCCTGACACCCGTCTCTATAGGAATGGCATATTAGCTCCGTCCCTCCTCC
AAGCGTTCGGGGGGGAGGCAGGGCAGCAACAAGTCGACGGATTGTTGAGG
CTCGCCTGGGGGTTTCTGACGCACTGGCACTCGGAGAGTGACGTGGCGGA
GGCAGCTATAGGACTGCTCCGAGCGGTGCTTCTGGTAGGGGGGGGGGCGT
CAGGACCCGCGGCCTTGAGGTGCGACACGTGGAAGGTAATCTTGGCAGCG
ATGGAGGCGGAGGGCGCAATGTTATTGCAGCAGCAATCGCAGCAGCAGCA
GCAGCATCAGGATGGTCACGGTTACGGTCATGGACAACTGCACCAGCAGC
AGCAGCAGCACCCTCCTCACATACCTCCGGAGCTGGGCTATATCCGTTTA
AGACCTAATGTGCGTGGAGAGCTCCTGGAGGTGATTGTCGGTGGGGTCCT
CTCCCATGAAAACGACCCGGAGGCACCTCGAGCACTCATGCAAGTGGCGA
ACCCCCTCGAAACTCGGCTCCAACACCTTCTTCTGAAGCTCTCCTCCGCT
GCTGCCACTGCTTCCATGAAAGGAAACGCCACCGCAGCAACCGCAGCGGC
AAGGGCGCGCGCAGCACTCGCACAGGAGGTTGGGGAGGTGGCTGGCCTCT
ACGCAGGTTTGGCCAAGGCGGTGGATCATTCGGGGCAGGCCCTCCTTGCG
TGTTTGGTAACCCGTGCGTTGGAGCCGTTGGTGGGCGCGGCCACTCAGTG
TGGCCCGTATCCGGAGACGATGCACGCCGTGCTTGAATTCTTGAGAAATT
ACGCCGAAGTCCATATTTCCAGTTTAGGTGCCGAGGCCACCATGGCGTTG
CTGACAGCAGCGGGTCAAGCGCTCAAAGCCTACGCAGCCCACAATTTGGG
GAGGACTAGGAAAGACGCCAATTCGAAGGAGGAGGCGGTGGCGGACATGT
TGTGTGTATTGGAGCTTTTATCGTATCTGGCAACGAAGGACTTTATTGAT
TTCTCGGCCGAACACGAGGGGAAAGTGGCGGCAGATGCAGTGGCGGATGT
GGTATTTTTTGGGCTGGAGCGGATGATTCCGTTAATGACGGAAGAATACC
TGGACTTCCCTCCTTTGGGAAAGCAGTATTTCACCCTGGTAAACTCGATG
GTGTCAACATACACGGGACGGGTGGCTTTGTTGCCGCATCCGCTGTTCAT
GCAGTTGGTGCAGAGCGTCATGTTCGGGGTGCAACGACCCGATAGTGAGA
TTGCTCGGGATTCGTTGCGGGCATTGGCGGGGTTGGCCTCATTCCATGCT
AAAGCATGCCAGGAAGCTCAGAATGGAGGGGGCGGAAGGGCAGGCTTGGG
TGTGCATGTGGCGGCCCATCCAGGTTTGTTGTCGGATTGTATGCACAAGC
TGCTGCATATGGTGGTGTACGAGGGGAGCATTTGGGATAGGCTGGACGCG
GCCTCGAGTGCTCTCCTGGCTTTGGTCCTGTGTGATCGTGACGCATTCTT
ACGGATGGTTCATGGAATTTTGGAGCAGCAGCCACCAGGTGTCAAGGGCA
GGCTGCGGCACGAATTCGAAGAAATGGTCAAAGCGATCCCCCCTCCGCAG
GTGCCACCCGCCGGTGGAGGAGGAAAGGGGCGAGGGATGATAACGGACCG
ACAGACAAAACTGGCTTTTCGGGACCGTCTAAAAGAGTTTGCCAAGCGGG
TGCGGCCGTTTATGCAGATGCGGTGAAGGGAGGGAGGGAGAGAAGAGGGG
TGGAGGAGAAAGGGTAGGAAACAAATGCACAAAGAAAATAGCATTATGTT
TCCCGTTTGAA
back to top

protein sequence of NO03G05360.1

>NO03G05360.1-protein ID=NO03G05360.1-protein|Name=NO03G05360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1342bp
MDAALQHVEHTCALLQSDPMGAGQILLALRSDPEAVSIARHVLEHSTMPA
AHFHATGILQAALLGRWTELPLDERAAARNYLATLLLTHGDRYASFVTSQ
LLQTFAVLWKRGWAEEGAEGKTRFFQQVQALTQQAKQGQDHHHQQNCNGG
AAEGAGQDEIVLASKFILALVGEFSTAKSAALGLPLEFHRQAHKAFETYG
LLPCLELGIGMMADVVDGVLGVTTPAGGEGGAAAAAIAGERAELILGRLD
AVVQLCVEILSWDFGGFDPLHEPSSTAPSFISPPITWRPFLLKLELFEAL
IEVYIRIRSFRISGVHQREQEARTHALRQLLTQLASLQGPIFPNGQERGL
YAAFLVRAGVELLSQSMEGAMAAVGGVSAAGRAEEMEKFGPEIVALASFL
QVCVSNFRLPVLATFSFFPDFCRRLSEVACRLLSVTAGMALEFRGADGDW
TEVCEEGWAMEAFEVLLETWGVMVGEPGLDLLGGGGGDNSPPLGPVGVGG
GEGGGKLDGSYGKGGREYDVVATRRVIVEAATPMYQAYQTCRVTLSRVEA
ARSVAVEEDEDEVAIAEMGTQEQVTGVAAIGRLAPATALAFLKHLLLDPP
GEGGTEGGGKGGCFPRLHLLLTAGGGEEVGSGEGMDRSSTGVAALMEEVR
VLVQGLGFLIADDFSGEQPAIPESIHRLCFQSSSYSSPPLLASSSLSSSS
TSSLSFSSSPSPESTSALLLETCGQVHLLATFLLQRVIHDPNDPILSPYL
TEAVLWFLTRWARTYVLPDTRLYRNGILAPSLLQAFGGEAGQQQVDGLLR
LAWGFLTHWHSESDVAEAAIGLLRAVLLVGGGASGPAALRCDTWKVILAA
MEAEGAMLLQQQSQQQQQHQDGHGYGHGQLHQQQQQHPPHIPPELGYIRL
RPNVRGELLEVIVGGVLSHENDPEAPRALMQVANPLETRLQHLLLKLSSA
AATASMKGNATAATAAARARAALAQEVGEVAGLYAGLAKAVDHSGQALLA
CLVTRALEPLVGAATQCGPYPETMHAVLEFLRNYAEVHISSLGAEATMAL
LTAAGQALKAYAAHNLGRTRKDANSKEEAVADMLCVLELLSYLATKDFID
FSAEHEGKVAADAVADVVFFGLERMIPLMTEEYLDFPPLGKQYFTLVNSM
VSTYTGRVALLPHPLFMQLVQSVMFGVQRPDSEIARDSLRALAGLASFHA
KACQEAQNGGGGRAGLGVHVAAHPGLLSDCMHKLLHMVVYEGSIWDRLDA
ASSALLALVLCDRDAFLRMVHGILEQQPPGVKGRLRHEFEEMVKAIPPPQ
VPPAGGGGKGRGMITDRQTKLAFRDRLKEFAKRVRPFMQMR*
back to top

mRNA from alignment at chr3:1530006..1534116+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G05360.1 ID=NO03G05360.1|Name=NO03G05360.1|organism=Nannochloropsis oceanica|type=mRNA|length=4111bp|location=Sequence derived from alignment at chr3:1530006..1534116+ (Nannochloropsis oceanica)
ATGGATGCCGCCCTCCAACACGTCGAACATACTTGTGCCCTCCTCCAATC CGACCCCATGGGGGCCGGGCAAATTCTCCTCGCCCTCCGCAGCGACCCCG AGGCAGTCTCCATCGCTCGCCATGTCCTGGAGCACTCCACAATGCCCGCT GCCCACTTCCATGCCACTGGCATCCTCCAAGCCGCTTTACTCGGACGTTG GACAGAGTTGCCTCTGGATGAGCGGGCGGCGGCACGAAATTACCTGGCGA CCTTGCTATTGACGCATGGCGATCGATATGCCTCCTTTGTGACCTCTCAG CTCTTGCAGACGTTTGCCGTGCTCTGGAAACGTGGCTGGGCCGAAGAGGG AGCGGAGGGCAAGACACGCTTCTTTCAGCAGGTCCAAGCTTTGACACAGC AAGCAAAACAAGGGCAGGACCATCACCACCAGCAAAATTGTAATGGAGGA GCAGCAGAGGGAGCAGGACAGGATGAAATTGTGTTGGCAAGCAAATTTAT CCTGGCCTTAGTCGGGGAGTTTAGCACTGCCAAGTCAGCAGCGTTGGGTC TACCATTGGAATTTCATCGGCAGGCGCACAAGGCGTTCGAGACGTATGGA CTCTTGCCGTGCTTGGAGCTGGGGATAGGGATGATGGCTGATGTAGTGGA CGGGGTATTGGGTGTGACAACGCCTGCCGGTGGAGAGGGAGGAGCAGCAG CAGCAGCTATTGCGGGGGAAAGAGCAGAATTGATTCTGGGGAGGCTCGAC GCCGTCGTCCAGCTGTGCGTGGAAATTCTGTCGTGGGACTTCGGAGGCTT TGATCCTCTGCACGAGCCTTCCTCCACTGCGCCCTCCTTCATCTCGCCCC CCATCACCTGGCGTCCCTTCCTCCTCAAGCTAGAGCTTTTCGAAGCCTTA ATCGAAGTCTACATTCGCATCCGTTCCTTCCGCATTTCTGGTGTCCACCA ACGCGAGCAAGAAGCAAGGACCCATGCACTAAGGCAGCTTCTCACCCAGC TCGCTTCTTTGCAGGGTCCGATTTTCCCCAACGGGCAAGAACGGGGGCTG TACGCAGCTTTCTTGGTCAGGGCAGGCGTAGAATTGCTCTCGCAAAGTAT GGAGGGCGCCATGGCTGCCGTGGGTGGAGTGTCAGCAGCGGGGAGAGCGG AGGAGATGGAGAAGTTCGGGCCAGAGATTGTGGCCCTGGCTTCCTTTTTG CAGGTGTGTGTGAGCAATTTCCGCTTGCCTGTGTTGGCGACTTTTTCTTT TTTCCCCGACTTCTGTCGACGGTTGAGTGAGGTCGCGTGTCGGTTACTGA GTGTAACGGCTGGGATGGCGTTGGAGTTCAGAGGGGCGGATGGCGATTGG ACGGAAGTGTGTGAAGAGGGGTGGGCTATGGAGGCGTTTGAGGTGCTGTT GGAGACATGGGGTGTGATGGTAGGGGAGCCAGGGTTGGATCTGTTGGGGG GAGGGGGAGGAGACAACAGCCCGCCGTTGGGGCCGGTGGGGGTGGGCGGG GGGGAGGGAGGGGGGAAGTTGGATGGGAGTTATGGTAAGGGAGGGAGGGA GTATGATGTGGTGGCTACAAGGAGGGTGATTGTGGAGGCGGCGACACCCA TGTACCAGGCCTATCAAACGTGCCGTGTGACCTTGTCGCGGGTCGAAGCA GCACGATCTGTGGCGGTGGAAGAGGACGAGGACGAGGTGGCTATAGCGGA AATGGGCACCCAGGAGCAGGTGACTGGTGTGGCGGCCATAGGTCGCTTGG CACCGGCCACGGCCTTGGCGTTTTTGAAGCATCTGTTGCTCGATCCCCCG GGGGAGGGAGGGACGGAGGGAGGGGGGAAAGGCGGGTGTTTCCCGCGGTT GCATTTGCTGTTGACTGCGGGAGGAGGAGAAGAAGTCGGGAGCGGGGAAG GGATGGATCGGAGTTCAACGGGCGTGGCGGCCTTGATGGAGGAAGTGCGG GTGCTGGTGCAAGGACTCGGCTTTTTAATTGCCGACGATTTCTCCGGGGA ACAGCCCGCTATCCCCGAATCCATTCACCGTCTTTGCTTCCAAAGCTCCT CCTACTCTTCGCCTCCCTTACTCGCATCCTCTTCCCTGTCCTCCTCCTCC ACATCCTCCCTGTCCTTCTCCTCCTCCCCTTCTCCCGAGAGCACCTCGGC CCTCCTCCTAGAAACCTGCGGACAGGTCCACCTCCTTGCCACTTTCCTCC TTCAACGCGTCATCCACGACCCGAACGACCCCATTCTCTCCCCCTATCTC ACCGAAGCGGTGCTCTGGTTCTTGACCCGCTGGGCACGAACGTACGTCCT GCCTGACACCCGTCTCTATAGGAATGGCATATTAGCTCCGTCCCTCCTCC AAGCGTTCGGGGGGGAGGCAGGGCAGCAACAAGTCGACGGATTGTTGAGG CTCGCCTGGGGGTTTCTGACGCACTGGCACTCGGAGAGTGACGTGGCGGA GGCAGCTATAGGACTGCTCCGAGCGGTGCTTCTGGTAGGGGGGGGGGCGT CAGGACCCGCGGCCTTGAGGTGCGACACGTGGAAGGTAATCTTGGCAGCG ATGGAGGCGGAGGGCGCAATGTTATTGCAGCAGCAATCGCAGCAGCAGCA GCAGCATCAGGATGGTCACGGTTACGGTCATGGACAACTGCACCAGCAGC AGCAGCAGCACCCTCCTCACATACCTCCGGAGCTGGGCTATATCCGTTTA AGACCTAATGTGCGTGGAGAGCTCCTGGAGGTGATTGTCGGTGGGGTCCT CTCCCATGAAAACGACCCGGAGGCACCTCGAGCACTCATGCAAGTGGCGA ACCCCCTCGAAACTCGGCTCCAACACCTTCTTCTGAAGCTCTCCTCCGCT GCTGCCACTGCTTCCATGAAAGGAAACGCCACCGCAGCAACCGCAGCGGC AAGGGCGCGCGCAGCACTCGCACAGGAGGTTGGGGAGGTGGCTGGCCTCT ACGCAGGTTTGGCCAAGGCGGTGGATCATTCGGGGCAGGCCCTCCTTGCG TGTTTGGTAACCCGTGCGTTGGAGCCGTTGGTGGGCGCGGCCACTCAGTG TGGCCCGTATCCGGAGACGATGCACGCCGTGCTTGAATTCTTGAGAAATT ACGCCGAAGTCCATATTTCCAGTTTAGGTGCCGAGGCCACCATGGCGTTG CTGACAGCAGCGGGTCAAGCGCTCAAAGCCTACGCAGCCCACAATTTGGG GAGGACTAGGAAAGACGCCAATTCGAAGGAGGAGGCGGTGGCGGACATGT TGTGTGTATTGGAGCTTTTATCGTATCTGGCAACGAAGGACTTTATTGAT TTCTCGGCCGAACACGAGGGGAAAGTGGCGGCAGATGCAGTGGCGGATGT GGTATTTTTTGGGCTGGAGCGGATGATTCCGTTAATGACGGAAGAATACC TGGACTTCCCTCCTTTGGGAAAGCAGTATTTCACCCTGGTAAACTCGATG GTGTCAACATACACGGGACGGGTGGCTTTGTTGCCGCATCCGCTGTTCAT GCAGTTGGTGCAGAGCGTCATGTTCGGGGTGCAACGACCCGATAGTGAGA TTGCTCGGGATTCGTTGCGGGCATTGGCGGGGTTGGCCTCATTCCATGCT AAAGCATGCCAGGAAGCTCAGAATGGAGGGGGCGGAAGGGCAGGCTTGGG TGTGCATGTGGCGGCCCATCCAGGTTTGTTGTCGGATTGTATGCACAAGC TGCTGCATATGGTGGTGTACGAGGGGAGCATTTGGGATAGGCTGGACGCG GCCTCGAGTGCTCTCCTGGCTTTGGTCCTGTGTGATCGTGACGCATTCTT ACGGATGGTTCATGGAATTTTGGAGCAGCAGCCACCAGGTGTCAAGGGCA GGCTGCGGCACGAATTCGAAGAAATGGTCAAAGCGATCCCCCCTCCGCAG GTGCCACCCGCCGGTGGAGGAGGAAAGGGGCGAGGGATGATAACGGACCG ACAGACAAAACTGGCTTTTCGGGACCGTCTAAAAGAGTTTGCCAAGCGGG TGCGGCCGTTTATGCAGATGCGGTGAAGGGAGGGAGGGAGAGAAGAGGGG TGGAGGAGAAAGGGTAGGAAACAAATGCACAAAGAAAATAGCATTATGTT TCCCGTTTGAA
back to top

Coding sequence (CDS) from alignment at chr3:1530006..1534116+

>NO03G05360.1 ID=NO03G05360.1|Name=NO03G05360.1|organism=Nannochloropsis oceanica|type=CDS|length=4026bp|location=Sequence derived from alignment at chr3:1530006..1534116+ (Nannochloropsis oceanica)
ATGGATGCCGCCCTCCAACACGTCGAACATACTTGTGCCCTCCTCCAATC
CGACCCCATGGGGGCCGGGCAAATTCTCCTCGCCCTCCGCAGCGACCCCG
AGGCAGTCTCCATCGCTCGCCATGTCCTGGAGCACTCCACAATGCCCGCT
GCCCACTTCCATGCCACTGGCATCCTCCAAGCCGCTTTACTCGGACGTTG
GACAGAGTTGCCTCTGGATGAGCGGGCGGCGGCACGAAATTACCTGGCGA
CCTTGCTATTGACGCATGGCGATCGATATGCCTCCTTTGTGACCTCTCAG
CTCTTGCAGACGTTTGCCGTGCTCTGGAAACGTGGCTGGGCCGAAGAGGG
AGCGGAGGGCAAGACACGCTTCTTTCAGCAGGTCCAAGCTTTGACACAGC
AAGCAAAACAAGGGCAGGACCATCACCACCAGCAAAATTGTAATGGAGGA
GCAGCAGAGGGAGCAGGACAGGATGAAATTGTGTTGGCAAGCAAATTTAT
CCTGGCCTTAGTCGGGGAGTTTAGCACTGCCAAGTCAGCAGCGTTGGGTC
TACCATTGGAATTTCATCGGCAGGCGCACAAGGCGTTCGAGACGTATGGA
CTCTTGCCGTGCTTGGAGCTGGGGATAGGGATGATGGCTGATGTAGTGGA
CGGGGTATTGGGTGTGACAACGCCTGCCGGTGGAGAGGGAGGAGCAGCAG
CAGCAGCTATTGCGGGGGAAAGAGCAGAATTGATTCTGGGGAGGCTCGAC
GCCGTCGTCCAGCTGTGCGTGGAAATTCTGTCGTGGGACTTCGGAGGCTT
TGATCCTCTGCACGAGCCTTCCTCCACTGCGCCCTCCTTCATCTCGCCCC
CCATCACCTGGCGTCCCTTCCTCCTCAAGCTAGAGCTTTTCGAAGCCTTA
ATCGAAGTCTACATTCGCATCCGTTCCTTCCGCATTTCTGGTGTCCACCA
ACGCGAGCAAGAAGCAAGGACCCATGCACTAAGGCAGCTTCTCACCCAGC
TCGCTTCTTTGCAGGGTCCGATTTTCCCCAACGGGCAAGAACGGGGGCTG
TACGCAGCTTTCTTGGTCAGGGCAGGCGTAGAATTGCTCTCGCAAAGTAT
GGAGGGCGCCATGGCTGCCGTGGGTGGAGTGTCAGCAGCGGGGAGAGCGG
AGGAGATGGAGAAGTTCGGGCCAGAGATTGTGGCCCTGGCTTCCTTTTTG
CAGGTGTGTGTGAGCAATTTCCGCTTGCCTGTGTTGGCGACTTTTTCTTT
TTTCCCCGACTTCTGTCGACGGTTGAGTGAGGTCGCGTGTCGGTTACTGA
GTGTAACGGCTGGGATGGCGTTGGAGTTCAGAGGGGCGGATGGCGATTGG
ACGGAAGTGTGTGAAGAGGGGTGGGCTATGGAGGCGTTTGAGGTGCTGTT
GGAGACATGGGGTGTGATGGTAGGGGAGCCAGGGTTGGATCTGTTGGGGG
GAGGGGGAGGAGACAACAGCCCGCCGTTGGGGCCGGTGGGGGTGGGCGGG
GGGGAGGGAGGGGGGAAGTTGGATGGGAGTTATGGTAAGGGAGGGAGGGA
GTATGATGTGGTGGCTACAAGGAGGGTGATTGTGGAGGCGGCGACACCCA
TGTACCAGGCCTATCAAACGTGCCGTGTGACCTTGTCGCGGGTCGAAGCA
GCACGATCTGTGGCGGTGGAAGAGGACGAGGACGAGGTGGCTATAGCGGA
AATGGGCACCCAGGAGCAGGTGACTGGTGTGGCGGCCATAGGTCGCTTGG
CACCGGCCACGGCCTTGGCGTTTTTGAAGCATCTGTTGCTCGATCCCCCG
GGGGAGGGAGGGACGGAGGGAGGGGGGAAAGGCGGGTGTTTCCCGCGGTT
GCATTTGCTGTTGACTGCGGGAGGAGGAGAAGAAGTCGGGAGCGGGGAAG
GGATGGATCGGAGTTCAACGGGCGTGGCGGCCTTGATGGAGGAAGTGCGG
GTGCTGGTGCAAGGACTCGGCTTTTTAATTGCCGACGATTTCTCCGGGGA
ACAGCCCGCTATCCCCGAATCCATTCACCGTCTTTGCTTCCAAAGCTCCT
CCTACTCTTCGCCTCCCTTACTCGCATCCTCTTCCCTGTCCTCCTCCTCC
ACATCCTCCCTGTCCTTCTCCTCCTCCCCTTCTCCCGAGAGCACCTCGGC
CCTCCTCCTAGAAACCTGCGGACAGGTCCACCTCCTTGCCACTTTCCTCC
TTCAACGCGTCATCCACGACCCGAACGACCCCATTCTCTCCCCCTATCTC
ACCGAAGCGGTGCTCTGGTTCTTGACCCGCTGGGCACGAACGTACGTCCT
GCCTGACACCCGTCTCTATAGGAATGGCATATTAGCTCCGTCCCTCCTCC
AAGCGTTCGGGGGGGAGGCAGGGCAGCAACAAGTCGACGGATTGTTGAGG
CTCGCCTGGGGGTTTCTGACGCACTGGCACTCGGAGAGTGACGTGGCGGA
GGCAGCTATAGGACTGCTCCGAGCGGTGCTTCTGGTAGGGGGGGGGGCGT
CAGGACCCGCGGCCTTGAGGTGCGACACGTGGAAGGTAATCTTGGCAGCG
ATGGAGGCGGAGGGCGCAATGTTATTGCAGCAGCAATCGCAGCAGCAGCA
GCAGCATCAGGATGGTCACGGTTACGGTCATGGACAACTGCACCAGCAGC
AGCAGCAGCACCCTCCTCACATACCTCCGGAGCTGGGCTATATCCGTTTA
AGACCTAATGTGCGTGGAGAGCTCCTGGAGGTGATTGTCGGTGGGGTCCT
CTCCCATGAAAACGACCCGGAGGCACCTCGAGCACTCATGCAAGTGGCGA
ACCCCCTCGAAACTCGGCTCCAACACCTTCTTCTGAAGCTCTCCTCCGCT
GCTGCCACTGCTTCCATGAAAGGAAACGCCACCGCAGCAACCGCAGCGGC
AAGGGCGCGCGCAGCACTCGCACAGGAGGTTGGGGAGGTGGCTGGCCTCT
ACGCAGGTTTGGCCAAGGCGGTGGATCATTCGGGGCAGGCCCTCCTTGCG
TGTTTGGTAACCCGTGCGTTGGAGCCGTTGGTGGGCGCGGCCACTCAGTG
TGGCCCGTATCCGGAGACGATGCACGCCGTGCTTGAATTCTTGAGAAATT
ACGCCGAAGTCCATATTTCCAGTTTAGGTGCCGAGGCCACCATGGCGTTG
CTGACAGCAGCGGGTCAAGCGCTCAAAGCCTACGCAGCCCACAATTTGGG
GAGGACTAGGAAAGACGCCAATTCGAAGGAGGAGGCGGTGGCGGACATGT
TGTGTGTATTGGAGCTTTTATCGTATCTGGCAACGAAGGACTTTATTGAT
TTCTCGGCCGAACACGAGGGGAAAGTGGCGGCAGATGCAGTGGCGGATGT
GGTATTTTTTGGGCTGGAGCGGATGATTCCGTTAATGACGGAAGAATACC
TGGACTTCCCTCCTTTGGGAAAGCAGTATTTCACCCTGGTAAACTCGATG
GTGTCAACATACACGGGACGGGTGGCTTTGTTGCCGCATCCGCTGTTCAT
GCAGTTGGTGCAGAGCGTCATGTTCGGGGTGCAACGACCCGATAGTGAGA
TTGCTCGGGATTCGTTGCGGGCATTGGCGGGGTTGGCCTCATTCCATGCT
AAAGCATGCCAGGAAGCTCAGAATGGAGGGGGCGGAAGGGCAGGCTTGGG
TGTGCATGTGGCGGCCCATCCAGGTTTGTTGTCGGATTGTATGCACAAGC
TGCTGCATATGGTGGTGTACGAGGGGAGCATTTGGGATAGGCTGGACGCG
GCCTCGAGTGCTCTCCTGGCTTTGGTCCTGTGTGATCGTGACGCATTCTT
ACGGATGGTTCATGGAATTTTGGAGCAGCAGCCACCAGGTGTCAAGGGCA
GGCTGCGGCACGAATTCGAAGAAATGGTCAAAGCGATCCCCCCTCCGCAG
GTGCCACCCGCCGGTGGAGGAGGAAAGGGGCGAGGGATGATAACGGACCG
ACAGACAAAACTGGCTTTTCGGGACCGTCTAAAAGAGTTTGCCAAGCGGG
TGCGGCCGTTTATGCAGATGCGGTGA
back to top
Synonyms
Publications