NO03G04940.1, NO03G04940.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G04940.1
Unique NameNO03G04940.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1066
Alignment locationchr3:1405446..1406511 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1405446..1406511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G04940.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04940NO03G04940Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G04940.1NO03G04940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G04940.1.cds1NO03G04940.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G04940.1 ID=NO03G04940.1|Name=NO03G04940.1|organism=Nannochloropsis oceanica|type=mRNA|length=1066bp
GGGAGGAGGGGGGGGGGGACAGGAGGAGAGGGTGAGCTTCGGTGCGTTTG
ACGCGAGGCAGGTGGCGATGTTCCAAAATGTTCAGGGATGGGATATGGAA
CGAGAGGGGGGTGGTGGGAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAG
CAGCAGTATGAGGGAAAGAGGGAGAGAGATTATGAGTATGAGGAACGGGA
GATGTATAGCTATGAGATGGCTTTTCCGGCGTTTCCCACGCAGCTCGTGG
AGGTGGCGAAGGTAGAGGAGGAAGAGGAGGAGAAGGAGGAGGAGGAAGAA
GAAGAGGTGGTAGTAGTGGTGGGGGAGGAGCAGGAGGAGGAGAAAGAGGA
GGAAGAGGAGGACGCAGTAGCAGCAGCAACAGCAGAGACAGCGGCAACCT
CAGGGGCGGTAGAGGAAGGCCAGGGCAGCACCAAGGGACGAGCAATCCTG
GAGCTGCTCGTTCAACCCAATGTCTCCACAACCCCCCCTCCTTCCCTTCC
TCCCTTGTTGACCTCAGCAGTTGAGAAAGGGAAGGCGGAACGGGCGGAAA
ATTACTTCCGAATTGAGACTCGCTGTCTCGCTCGGATTGAGGGTGATTCC
CGTACCAGGTGGACAGCAGCCATGGCTGCCCTTGAAAAGGGATATATCAT
ACTTGATGCCCACACTCGCATGTTTGTCATCCGTCCCGGCCTCGGCCTGG
ATGGTGACCCTCGCTCCCTCCCTCCCCCTCATACTTCTCTTGTCCTCGAA
TGTAGGGGGAGTGTTTCCACTTCCACTGTTGGCTGCTCCTCGTCCTCAAG
GGATAGCGAGGAGGGAAGGGGAGAGAAGAGAGATGGAGGGGGGGTAAGGG
ATGGAGGGCAGAGAGAGAGAAGATGCGACGGGAAGCGGGGACACAGATAT
GGGCCATATCACCGTGGGAGGAGAGATAAAGAAGGAGAAGGAGAAGGGGG
AAAGGGAGAAGGAGGGGGAGGAAGGTAGGGAAGCACCGTGGCCGCGAGCA
GCATAGGAACCAACAGCAGCAGCAGTCGAATGGTACGACAAATGCTCGCA
CTTTGCTATAAGGAGA
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protein sequence of NO03G04940.1

>NO03G04940.1-protein ID=NO03G04940.1-protein|Name=NO03G04940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=297bp
MGYGTRGGWWEQQQQQQQQQQQQYEGKRERDYEYEEREMYSYEMAFPAFP
TQLVEVAKVEEEEEEKEEEEEEEVVVVVGEEQEEEKEEEEEDAVAAATAE
TAATSGAVEEGQGSTKGRAILELLVQPNVSTTPPPSLPPLLTSAVEKGKA
ERAENYFRIETRCLARIEGDSRTRWTAAMAALEKGYIILDAHTRMFVIRP
GLGLDGDPRSLPPPHTSLVLECRGSVSTSTVGCSSSSRDSEEGRGEKRDG
GGVRDGGQRERRCDGKRGHRYGPYHRGRRDKEGEGEGGKGEGGGGR*
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mRNA from alignment at chr3:1405446..1406511-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G04940.1 ID=NO03G04940.1|Name=NO03G04940.1|organism=Nannochloropsis oceanica|type=mRNA|length=1066bp|location=Sequence derived from alignment at chr3:1405446..1406511- (Nannochloropsis oceanica)
GGGAGGAGGGGGGGGGGGACAGGAGGAGAGGGTGAGCTTCGGTGCGTTTG
ACGCGAGGCAGGTGGCGATGTTCCAAAATGTTCAGGGATGGGATATGGAA
CGAGAGGGGGGTGGTGGGAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAG
CAGCAGTATGAGGGAAAGAGGGAGAGAGATTATGAGTATGAGGAACGGGA
GATGTATAGCTATGAGATGGCTTTTCCGGCGTTTCCCACGCAGCTCGTGG
AGGTGGCGAAGGTAGAGGAGGAAGAGGAGGAGAAGGAGGAGGAGGAAGAA
GAAGAGGTGGTAGTAGTGGTGGGGGAGGAGCAGGAGGAGGAGAAAGAGGA
GGAAGAGGAGGACGCAGTAGCAGCAGCAACAGCAGAGACAGCGGCAACCT
CAGGGGCGGTAGAGGAAGGCCAGGGCAGCACCAAGGGACGAGCAATCCTG
GAGCTGCTCGTTCAACCCAATGTCTCCACAACCCCCCCTCCTTCCCTTCC
TCCCTTGTTGACCTCAGCAGTTGAGAAAGGGAAGGCGGAACGGGCGGAAA
ATTACTTCCGAATTGAGACTCGCTGTCTCGCTCGGATTGAGGGTGATTCC
CGTACCAGGTGGACAGCAGCCATGGCTGCCCTTGAAAAGGGATATATCAT
ACTTGATGCCCACACTCGCATGTTTGTCATCCGTCCCGGCCTCGGCCTGG
ATGGTGACCCTCGCTCCCTCCCTCCCCCTCATACTTCTCTTGTCCTCGAA
TGTAGGGGGAGTGTTTCCACTTCCACTGTTGGCTGCTCCTCGTCCTCAAG
GGATAGCGAGGAGGGAAGGGGAGAGAAGAGAGATGGAGGGGGGGTAAGGG
ATGGAGGGCAGAGAGAGAGAAGATGCGACGGGAAGCGGGGACACAGATAT
GGGCCATATCACCGTGGGAGGAGAGATAAAGAAGGAGAAGGAGAAGGGGG
AAAGGGAGAAGGAGGGGGAGGAAGGTAGGGAAGCACCGTGGCCGCGAGCA
GCATAGGAACCAACAGCAGCAGCAGTCGAATGGTACGACAAATGCTCGCA
CTTTGCTATAAGGAGA
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Coding sequence (CDS) from alignment at chr3:1405446..1406511-

>NO03G04940.1 ID=NO03G04940.1|Name=NO03G04940.1|organism=Nannochloropsis oceanica|type=CDS|length=891bp|location=Sequence derived from alignment at chr3:1405446..1406511- (Nannochloropsis oceanica)
ATGGGATATGGAACGAGAGGGGGGTGGTGGGAGCAGCAGCAACAGCAGCA
GCAGCAGCAGCAGCAGCAGTATGAGGGAAAGAGGGAGAGAGATTATGAGT
ATGAGGAACGGGAGATGTATAGCTATGAGATGGCTTTTCCGGCGTTTCCC
ACGCAGCTCGTGGAGGTGGCGAAGGTAGAGGAGGAAGAGGAGGAGAAGGA
GGAGGAGGAAGAAGAAGAGGTGGTAGTAGTGGTGGGGGAGGAGCAGGAGG
AGGAGAAAGAGGAGGAAGAGGAGGACGCAGTAGCAGCAGCAACAGCAGAG
ACAGCGGCAACCTCAGGGGCGGTAGAGGAAGGCCAGGGCAGCACCAAGGG
ACGAGCAATCCTGGAGCTGCTCGTTCAACCCAATGTCTCCACAACCCCCC
CTCCTTCCCTTCCTCCCTTGTTGACCTCAGCAGTTGAGAAAGGGAAGGCG
GAACGGGCGGAAAATTACTTCCGAATTGAGACTCGCTGTCTCGCTCGGAT
TGAGGGTGATTCCCGTACCAGGTGGACAGCAGCCATGGCTGCCCTTGAAA
AGGGATATATCATACTTGATGCCCACACTCGCATGTTTGTCATCCGTCCC
GGCCTCGGCCTGGATGGTGACCCTCGCTCCCTCCCTCCCCCTCATACTTC
TCTTGTCCTCGAATGTAGGGGGAGTGTTTCCACTTCCACTGTTGGCTGCT
CCTCGTCCTCAAGGGATAGCGAGGAGGGAAGGGGAGAGAAGAGAGATGGA
GGGGGGGTAAGGGATGGAGGGCAGAGAGAGAGAAGATGCGACGGGAAGCG
GGGACACAGATATGGGCCATATCACCGTGGGAGGAGAGATAAAGAAGGAG
AAGGAGAAGGGGGAAAGGGAGAAGGAGGGGGAGGAAGGTAG
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Synonyms
Publications