NO03G04490.2, NO03G04490.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G04490.2
Unique NameNO03G04490.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1838
Alignment locationchr3:1290725..1292746 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1290725..1292746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G04490.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04490NO03G04490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G04490.2NO03G04490.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G04490.2.cds1NO03G04490.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G04490.2.cds2NO03G04490.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G04490.2 ID=NO03G04490.2|Name=NO03G04490.2|organism=Nannochloropsis oceanica|type=mRNA|length=1838bp
AGCCTACGTCCCCACTCCAATCACGCCACAACGACCAAACCAAAGCTCAA
GTCCCATGGTCTTCGCAAAACAGTACACGCGAAAAGATCTTGCCATCACG
GCGCCCACTGCAGGGCCTCGCGAAGTTGCTTCCCGCTCCTCTTCCCGAGT
GTTTGCCTCCCTCATGGGCATCGACGGCCTGTTTGACAACCACATTTCCC
CCGCCCTTGCCACCCGGGAGCTTCTCCGCCTGTCCGCGGCCTGCAAAGAG
CTGCAGAAGCCTGCCCGTGCCCTTGTTACAGAAGTGTGCATCCGTCGAGA
TATTGTACGTCGAAGCGCCGTCCCCCGCGCGGTGCGAATAGGCCTTCCCC
TCCTCCCTGGCCTTCGTGTCCTAGACCTGTCCTTCGTTTCCCTCGCTCCG
CGCGACTATACCGCCATGGCCAGTGCATTGCTCTCGCCTGGGACAAGAAC
AAATGCGCGGCTGAAGACTTTTCGCTTGAGGCAACGGGCGGGGTATTCAC
CTGGTCCAATTCCTCGGGAGTCAGATCTGTGCCTGCTTCGTTTTTTCCAA
GCCGTTGTGGCCACGCAGGCCTGGCCTCTACTAGAAGATTTAGACCTATC
AGGGCACTGCATAGGCGATGCTGCTGTCGAGCTTTTGGTGTCCTGGATGG
AAGGTACTGCGGGGGGCAGCAGCAGCAGCAGCGGTCAATGGCAGCAGCGT
CGGTTGAAGCGCCTCGGTCTGAGTACCATTAACATGTCGGAGGTAGGCTT
GATGCATCTACTAAAGCCATTGGCGAAGGGAAAATGTCCCGTTTTGTTGC
GCATGGACCTCTCCGGGAATTCTTGTGGAAGCAGTGGTGGTGGGGGTGAT
GGAGGAGGAGACATGGAGGGAGTAGGAGGCGTAGGGGAAGGGACGAAGAG
GAAGTACAAGGAGGCCCTGTGGACGGCAGCGTTGTGCGGAATGCCGCATT
TGCTGGAGCTGGATTTGAACGAGAGTGGGGTGGAGGGAGAGGTCACACTA
GCCTTGGCTCGATCCTTGACTCAAGGCGCCGGGCGGAAGATGAAGCGATT
GTCGCTGGGTGGATGTTCTCTGACGGATCAGGATACCCGGAAATTGTGGG
AGGTCGTGAGGGGAGGAGGAGTGCCGTGGCTACAGGACCTGAATTTGAGG
CAAGCATGCTTAGAGAGAGAGGCTTTCATGGGGTTGGCGGCTGGGCTGGA
AAGAGGGCGCTTGAGGTATCTGCGACGTTTGGACTTGTCGGAAAATCTGT
TGACGTATGAAGGTAGATTGCATCCTCCCTCACTACCCCTCTATTCCTAT
TCCCCTATTTTTTTGCTTTACTTTCCACACGCCCCGTTCTCGATAGGTGC
CAGCTAAGCCATGCTTGCTGACGTCCTCCTTCCCTTCCTCCCTTCCCCTC
TCCCTCCCTTCCCCCCTCACTCCTTTCCTCCCTCCCTCCTTCCCAGGCAT
GCAAGACATCGTGAAGGCCCTCCAAAATGGAGCAGCGCCACAGCTCCGTT
CACTCTGCTTGGGCAGCACTGGGCATGAATTCGAAGAAGTGAATGAGATG
GTGGGACTGTGGTGTGCCAAGCTGAAGAATGACGGAAATTGTCCTCAGTT
GGTGCTCCAAAGCAAGGAGGAAGGGAAGGGGGGAGGAGAGGGGGGAGGGG
TTGTCTCGATGGAGGTGGAAGAAGACAAGGAAGAGGAGGAGGTAGAGCAG
GAGGAGAAGGAGAACAAAGGAAATAAGGCCGGTGGAGCGGCTAACGCTCG
AAAGTGGGTGAAAGCGTGTGTCAGTGCATGACATGACGCTGACGAGACAC
AGGAAACCCTGCGAGGCACTCAAAGAACCAGAGAAGAG
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protein sequence of NO03G04490.2

>NO03G04490.2-protein ID=NO03G04490.2-protein|Name=NO03G04490.2|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MVFAKQYTRKDLAITAPTAGPREVASRSSSRVFASLMGIDGLFDNHISPA
LATRELLRLSAACKELQKPARALVTEVCIRRDIVRRSAVPRAVRIGLPLL
PGLRVLDLSFVSLAPRDYTAMASALLSPGTRTNARLKTFRLRQRAGYSPG
PIPRESDLCLLRFFQAVVATQAWPLLEDLDLSGHCIGDAAVELLVSWMEG
TAGGSSSSSGQWQQRRLKRLGLSTINMSEVGLMHLLKPLAKGKCPVLLRM
DLSGNSCGSSGGGGDGGGDMEGVGGVGEGTKRKYKEALWTAALCGMPHLL
ELDLNESGVEGEVTLALARSLTQGAGRKMKRLSLGGCSLTDQDTRKLWEV
VRGGGVPWLQDLNLRQACLEREAFMGLAAGLERGRLRYLRRLDLSENLLT
YEGRLHPPSLPLYSYSPIFLLYFPHAPFSIGAS*
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mRNA from alignment at chr3:1290725..1292746-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G04490.2 ID=NO03G04490.2|Name=NO03G04490.2|organism=Nannochloropsis oceanica|type=mRNA|length=2022bp|location=Sequence derived from alignment at chr3:1290725..1292746- (Nannochloropsis oceanica)
AGCCTACGTCCCCACTCCAATCACGCCACAACGACCAAACCAAAGCTCAA
GTCCCATGGTCTTCGCAAAACAGTACACGCGAAAAGATCTTGCCATCACG
GCGCCCACTGCAGGGCCTCGCGAAGTTGCTTCCCGCTCCTCTTCCCGAGT
GTTTGCCTCCCTCATGGGCATCGACGGCCTGTTTGACAACCACATTTCCC
CCGCCCTTGCCACCCGGGAGCTTCTCCGCCTGTCCGCGGCCTGCAAAGAG
CTGCAGAAGCCTGCCCGTGCCCTTGTTACAGAAGTGTGCATCCGTCGAGA
TATTGTACGTCGAAGCGCCGTCCCCCGCGCGGTGCGAATAGGCCTTCCCC
TCCTCCCTGGCCTTCGTGTCCTAGACCTGTCCTTCGTTTCCCTCGCTCCG
CGCGACTATACCGCCATGGCCAGTGCATTGCTCTCGCCTGGGACAAGAAC
AAATGCGCGGCTGAAGACTTTTCGCTTGAGGCAACGGGCGGGGTATTCAC
CTGGTCCAATTCCTCGGGTAAGGTTTGGGTAAAGTATGTTGGTCGACAGC
ACCTACAGCAGCAGCAGCAGTAGTAGCTTCACCGCCAATACCACTACTTT
CATATTATCACCTAACTGCGTATGTACACTTTCAAAAACAAACAAATAAA
GAAGAAAATGCTACCTTCCCTCCTCTTACCCCGACGATAAAAACAAAACA
GGAGTCAGATCTGTGCCTGCTTCGTTTTTTCCAAGCCGTTGTGGCCACGC
AGGCCTGGCCTCTACTAGAAGATTTAGACCTATCAGGGCACTGCATAGGC
GATGCTGCTGTCGAGCTTTTGGTGTCCTGGATGGAAGGTACTGCGGGGGG
CAGCAGCAGCAGCAGCGGTCAATGGCAGCAGCGTCGGTTGAAGCGCCTCG
GTCTGAGTACCATTAACATGTCGGAGGTAGGCTTGATGCATCTACTAAAG
CCATTGGCGAAGGGAAAATGTCCCGTTTTGTTGCGCATGGACCTCTCCGG
GAATTCTTGTGGAAGCAGTGGTGGTGGGGGTGATGGAGGAGGAGACATGG
AGGGAGTAGGAGGCGTAGGGGAAGGGACGAAGAGGAAGTACAAGGAGGCC
CTGTGGACGGCAGCGTTGTGCGGAATGCCGCATTTGCTGGAGCTGGATTT
GAACGAGAGTGGGGTGGAGGGAGAGGTCACACTAGCCTTGGCTCGATCCT
TGACTCAAGGCGCCGGGCGGAAGATGAAGCGATTGTCGCTGGGTGGATGT
TCTCTGACGGATCAGGATACCCGGAAATTGTGGGAGGTCGTGAGGGGAGG
AGGAGTGCCGTGGCTACAGGACCTGAATTTGAGGCAAGCATGCTTAGAGA
GAGAGGCTTTCATGGGGTTGGCGGCTGGGCTGGAAAGAGGGCGCTTGAGG
TATCTGCGACGTTTGGACTTGTCGGAAAATCTGTTGACGTATGAAGGTAG
ATTGCATCCTCCCTCACTACCCCTCTATTCCTATTCCCCTATTTTTTTGC
TTTACTTTCCACACGCCCCGTTCTCGATAGGTGCCAGCTAAGCCATGCTT
GCTGACGTCCTCCTTCCCTTCCTCCCTTCCCCTCTCCCTCCCTTCCCCCC
TCACTCCTTTCCTCCCTCCCTCCTTCCCAGGCATGCAAGACATCGTGAAG
GCCCTCCAAAATGGAGCAGCGCCACAGCTCCGTTCACTCTGCTTGGGCAG
CACTGGGCATGAATTCGAAGAAGTGAATGAGATGGTGGGACTGTGGTGTG
CCAAGCTGAAGAATGACGGAAATTGTCCTCAGTTGGTGCTCCAAAGCAAG
GAGGAAGGGAAGGGGGGAGGAGAGGGGGGAGGGGTTGTCTCGATGGAGGT
GGAAGAAGACAAGGAAGAGGAGGAGGTAGAGCAGGAGGAGAAGGAGAACA
AAGGAAATAAGGCCGGTGGAGCGGCTAACGCTCGAAAGTGGGTGAAAGCG
TGTGTCAGTGCATGACATGACGCTGACGAGACACAGGAAACCCTGCGAGG
CACTCAAAGAACCAGAGAAGAG
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Coding sequence (CDS) from alignment at chr3:1290725..1292746-

>NO03G04490.2 ID=NO03G04490.2|Name=NO03G04490.2|organism=Nannochloropsis oceanica|type=CDS|length=1302bp|location=Sequence derived from alignment at chr3:1290725..1292746- (Nannochloropsis oceanica)
ATGGTCTTCGCAAAACAGTACACGCGAAAAGATCTTGCCATCACGGCGCC
CACTGCAGGGCCTCGCGAAGTTGCTTCCCGCTCCTCTTCCCGAGTGTTTG
CCTCCCTCATGGGCATCGACGGCCTGTTTGACAACCACATTTCCCCCGCC
CTTGCCACCCGGGAGCTTCTCCGCCTGTCCGCGGCCTGCAAAGAGCTGCA
GAAGCCTGCCCGTGCCCTTGTTACAGAAGTGTGCATCCGTCGAGATATTG
TACGTCGAAGCGCCGTCCCCCGCGCGGTGCGAATAGGCCTTCCCCTCCTC
CCTGGCCTTCGTGTCCTAGACCTGTCCTTCGTTTCCCTCGCTCCGCGCGA
CTATACCGCCATGGCCAGTGCATTGCTCTCGCCTGGGACAAGAACAAATG
CGCGGCTGAAGACTTTTCGCTTGAGGCAACGGGCGGGGTATTCACCTGGT
CCAATTCCTCGGGAGTCAGATCTGTGCCTGCTTCGTTTTTTCCAAGCCGT
TGTGGCCACGCAGGCCTGGCCTCTACTAGAAGATTTAGACCTATCAGGGC
ACTGCATAGGCGATGCTGCTGTCGAGCTTTTGGTGTCCTGGATGGAAGGT
ACTGCGGGGGGCAGCAGCAGCAGCAGCGGTCAATGGCAGCAGCGTCGGTT
GAAGCGCCTCGGTCTGAGTACCATTAACATGTCGGAGGTAGGCTTGATGC
ATCTACTAAAGCCATTGGCGAAGGGAAAATGTCCCGTTTTGTTGCGCATG
GACCTCTCCGGGAATTCTTGTGGAAGCAGTGGTGGTGGGGGTGATGGAGG
AGGAGACATGGAGGGAGTAGGAGGCGTAGGGGAAGGGACGAAGAGGAAGT
ACAAGGAGGCCCTGTGGACGGCAGCGTTGTGCGGAATGCCGCATTTGCTG
GAGCTGGATTTGAACGAGAGTGGGGTGGAGGGAGAGGTCACACTAGCCTT
GGCTCGATCCTTGACTCAAGGCGCCGGGCGGAAGATGAAGCGATTGTCGC
TGGGTGGATGTTCTCTGACGGATCAGGATACCCGGAAATTGTGGGAGGTC
GTGAGGGGAGGAGGAGTGCCGTGGCTACAGGACCTGAATTTGAGGCAAGC
ATGCTTAGAGAGAGAGGCTTTCATGGGGTTGGCGGCTGGGCTGGAAAGAG
GGCGCTTGAGGTATCTGCGACGTTTGGACTTGTCGGAAAATCTGTTGACG
TATGAAGGTAGATTGCATCCTCCCTCACTACCCCTCTATTCCTATTCCCC
TATTTTTTTGCTTTACTTTCCACACGCCCCGTTCTCGATAGGTGCCAGCT
AA
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Synonyms
Publications