NO03G04230.1, NO03G04230.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G04230.1
Unique Name	NO03G04230.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3927
Alignment location	chr3:1220275..1224281 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1220275..1224281 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G04230.1 vs.
Match: EWM29855.1 (negative elongation factor b-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1102.0 bits (2849), Expect = 0.000e+0
Identity = 676/1262 (53.57%), Postives = 827/1262 (65.53%), Query Frame = 0

Query:  107 MDGSECVVDGDTKKRALPKLSLGGGGSGGGG-ETGGKKLKLIAPPVTITASKPPGVGPALTLKSLVPEATASETSAPVRLKWGVALNSSATAKPKLVVGTTNRATVTTAHAP-----PSPLPQPPSSATLLRSPTPSTRMEVVVATPAVQTTSPSDTASTPISVMTAAKASAAAAEIPLSPAPAA-LSTQPILKRKTFITNTPKSSIRTLPSTSPKELTQIRGPPVGNAAGRSLIKRGLREGDPRAFIHRFQAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTDEQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILEGLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLSLSSSSNRSSNSSSSSSSSKGVNTNKRRQDNPSIAQLVSCVNTDDNDKLEQVVNRYVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTHLARALEEWVKEGTVEGKGLIQVQVHLKAILATCDSATAAAQEKRVAAAGNGAG-GVTAKAKGKKKTKMPTTDPTTGNGSSSSIGLTLKLP-GNLSAAAAEKAWSKIPSLENALEDSMNYLINLDADTRWFAKPVWEVWPDIEQAYIAVVPHPMDLGTMKKRIKAG------KEGGHGGFYTSFEAFDKDAERVFDNCMAFNPVGK--RDGEEE-----------------------ELGGGGGGAGGGGGDLVSKATTSTFVSTGED---IGGGGGGGGGGRDPTVPQPLQGRPRVEGQMWGQALMLLADPFVLHVLGKTVKQQLDEVYKSHGLPKDHPLLPSLLQLLFLGLDARRQLVLVLHKHKTPGPPAPPATPTMLLAKKGGKAGNVAPRPPNLPPGFSIPDARVSPLLVRDKDGELAAENDVQEAARTVLPSLLEIFAHVNLAQKYEGTTEGWEGQPHDKEEVQEKMLESVGRLYRSCKARQPSPLLLCMVSHSLCHSLATADDARTTPLAKTLAALLDHLNRKKRSEMLLATPDPQDRGLWICLASAGLLRVPRKK------------ARVTGAAPAAVAAKAAGGAAVNT-----SAATTTASTRPPLDHELRDLLLSLFVKQLPFIPEPCSLSFCHEQVMRLLLGWMARGAFLKPKRRDGGGEADEEREKKEENAVKLWVGEIVQGVGGSKAVREAWEKERFQPMRRHYERLFEAEPWAKVLVWGEEKEEAKEGNRLVTNKEGRKKNCGVKIEEGRERKR 1309
            +D  +  VD  +KKR LP L +G   +G    E   KK+KL+A     + S+P  + PAL LK++ P  ++   S P  L        S  ++P ++   +  A V   H       P+P P PP SA    +   S+ +    ++PA+    P   +S P++  +       A  +P  P  A+ +  QP+         +PKS          KEL   RGPPVGNAAGR LIKRGLR GDPRAFI RFQ ENGL  IPEA PALQ+LDVLGV RLQVY +L  DLRARL +R+DRC D+ QLE+LLA SFGYLT+ EL+++PERII KLRR+P+R LDRLAARP +LE LPM+VKQQ WEAHP LFRRGL  +++ Y+ +RASV+MPA+DVVALLSLSS+ +     S++ +  K V+ +KRRQ+NP +A LV+CVNT+D+ KL+QV + ++++EY SKGDPTLCTLF+DFQV LA  RSGRA +I+RLTHLARALEEWVK G VE K L QVQVHL+A+L++               +G GAG GVT  +   KK K       T      S GLTLKLP   LS   AEK+W+KIP+LE ALE+ M YL+ LDA TRWFAKPV E+WP I++AY+AVVPHPMDL +M+KR+KA       KE G    Y++F AFD DAERVFDNCMAFNP G     G E                        + G  G G  G G  LV+KATTSTFV  G++   +   G G    RDPTVP+ L GRPRVE   WG ALMLLADP VL VLGKT+KQ+LDEV++S GLPKDHP +PSLLQLL+LGLDARRQL LV  K K   PP PP  PT  L KKG K G  AP PP LPP FSIPDARVS     DK+GE AAENDVQEA RTVLPSLLE+ A+V +A KY   T+GWEGQPHDK+E++ KMLESVGRLYR+CKARQPSPLLLC+++H+LCHSLAT DD RTTPLAKTLAALLDHLNRK+RSEM LA PD QDR LWI LASAGLLRVP+KK            A  T A P      A GGA V       + A+T+AS RPPL+ ELRDL+L +FV QLPF   P S+SFCHEQV+RLLLGWMARGA   PK ++G    +E ++   +  V+ WV  IVQGVGG KA+ E WEKE F+ +RR YERLFEA PWA+ +V GE       G  +V+   G     GV+ +E  ++K+
Sbjct:  100 VDKYKANVDDASKKRGLPALRIGSIEAGRAATEDKKKKIKLVAQAGK-SGSQP--IVPALHLKNIAPGNSSGTASVPTILSG----RESVKSRPVVISTDSEAAPVPALHVTASAHIPTPCPFPPVSAPSQAAVVASSPVNDR-SSPAMAPLPPPSPSSAPMAGSSDPALHEEATPVPAIPDVASHVKVQPV--------GSPKS----------KELVPARGPPVGNAAGRMLIKRGLRAGDPRAFIQRFQEENGLRGIPEARPALQLLDVLGVSRLQVYRHLLADLRARLVDRLDRCQDQAQLERLLAHSFGYLTVPELRTVPERIITKLRRIPSRILDRLAARPGLLEELPMRVKQQVWEAHPALFRRGLGAILEEYVRHRASVMMPAYDVVALLSLSSTPS----PSAAGAPGKEVSPSKRRQENPCLAHLVACVNTEDDSKLDQVASHFIIDEYVSKGDPTLCTLFADFQVQLAHVRSGRAAVISRLTHLARALEEWVKAGRVEAKALAQVQVHLRAMLSS---------------SGTGAGRGVTPMSLSSKKEKKRKEADIT------SSGLTLKLPRAALSTPVAEKSWAKIPTLEQALEEGMGYLLKLDAPTRWFAKPVLELWPQIQEAYLAVVPHPMDLESMRKRVKASVGGVGEKERGGTAGYSTFAAFDSDAERVFDNCMAFNPPGSAFHSGAERMKKAWGKFKVKFEKTDVKRAMDRKKGAVGAGGLGDGSGLVTKATTSTFVGAGDEAELLSAAGRGTDKARDPTVPEALPGRPRVEAPTWGHALMLLADPCVLQVLGKTLKQELDEVFRSQGLPKDHPRVPSLLQLLYLGLDARRQLALVRLKTKAGVPPPPP--PTEPLHKKGNKKGKTAPSPPELPPCFSIPDARVSFWGFGDKEGEPAAENDVQEAVRTVLPSLLEVNAYVKVANKYATATDGWEGQPHDKDEIEGKMLESVGRLYRACKARQPSPLLLCVLTHALCHSLATGDDDRTTPLAKTLAALLDHLNRKRRSEMTLALPDMQDRALWIGLASAGLLRVPKKKNKAALAGEKANRAGATRAGPVGAGMPAVGGAGVGADRKAHATASTSASARPPLEPELRDLILGIFVNQLPFACSPRSISFCHEQVLRLLLGWMARGALEPPKGKEG---REEGKDGIGKRTVRNWVEGIVQGVGGHKAMWEVWEKEEFKCLRRQYERLFEATPWARGVVLGE------GGAGVVSESAGPD---GVRADESEQQKK 1296

The following BLAST results are available for this feature:

BLAST of NO03G04230.1 vs.

BLAST of NO03G04230.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29855.1	0.000e+0	53.57	negative elongation factor b-like protein [Nannoch...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G04230	NO03G04230	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04230.1	NO03G04230.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04230.1.cds1	NO03G04230.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04230.1.cds2	NO03G04230.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:1220275..1224281-
coding sequence from alignment at chr3:1220275..1224281-

mRNA sequence

>NO03G04230.1 ID=NO03G04230.1|Name=NO03G04230.1|organism=Nannochloropsis oceanica|type=mRNA|length=3927bp
ATGGAAGCAGCAGGAGAGGATGACAAGAAACCCCCCGATGCCAGCTTCAG
CAAACCAATATTCCTTTCTGTCCCCGAGAGCAGTGCTCCTGGCCCGACCG
TCCTCAAGCTACGAGCCACCGCCTTGACAGCCTCAGCTTCCGGCGGGTCC
TTGTCCGAAGCCAAATTGATGGACTCATCAAATAAAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCGACGGTCGAGGGGGGAGACAGTGGCAACCGTGTCC
ATGTCGATGGAAAGCAGCGTGTGCTGCCGACACTCCGAAAGGGGTCACCC
ACACAAACCACAGGTGCGATGGACGGAAGCGAATGTGTTGTCGATGGAGA
TACCAAGAAACGGGCATTGCCGAAGTTGAGTCTAGGTGGCGGTGGCAGCG
GTGGCGGAGGAGAAACAGGAGGGAAGAAACTTAAATTGATTGCCCCGCCC
GTGACGATTACAGCAAGCAAGCCGCCAGGCGTTGGTCCAGCCCTCACTTT
GAAGAGCCTTGTGCCTGAAGCTACAGCTAGTGAAACAAGCGCACCCGTGC
GGCTTAAATGGGGTGTTGCCCTCAATTCCTCTGCCACAGCAAAGCCCAAG
CTAGTTGTAGGGACGACAAATAGAGCAACAGTTACAACCGCGCACGCCCC
ACCATCTCCTCTTCCTCAGCCTCCGTCATCTGCTACTCTTCTGCGATCAC
CCACCCCTTCCACGCGCATGGAAGTAGTGGTAGCAACCCCTGCAGTCCAG
ACAACATCTCCCTCCGACACTGCCTCCACTCCTATATCCGTAATGACCGC
AGCAAAAGCATCAGCAGCTGCTGCTGAAATTCCACTCAGCCCAGCCCCTG
CCGCACTTTCCACACAGCCAATCCTCAAGAGGAAAACATTTATAACAAAC
ACCCCCAAGTCATCCATCCGCACCTTGCCTTCTACCAGCCCCAAGGAGCT
GACGCAGATCCGTGGTCCCCCAGTCGGAAACGCCGCCGGCCGGTCGCTTA
TCAAAAGAGGGCTGCGGGAAGGTGACCCCCGCGCGTTCATCCATCGTTTT
CAAGCGGAGAATGGTCTATTGTCCATTCCAGAAGCGGGGCCTGCACTGCA
GATGCTTGATGTGCTGGGTGTCCCTCGATTGCAAGTGTACCATAATTTAT
TTACTGATCTCCGGGCACGTTTGGAGGAGAGAGTGGATAGGTGTACGGAT
GAACAACAGCTGGAGAAGTTGTTGGCACAGAGCTTCGGGTATTTGACGAT
GGCGGAGCTGAAGTCAATCCCGGAGAGAATAATTGTAAAACTACGACGAG
TGCCGGCTCGATTTCTGGACCGACTGGCGGCGCGTCCGCAGATTCTGGAG
GGGCTGCCGATGAAAGTGAAGCAACAGGCGTGGGAGGCGCATCCAGGGTT
GTTTCGAAGGGGGTTGGTGGGTATGGTGGATGCATATTTGGGGAATCGAG
CCTCGGTTGTCATGCCGGCACATGATGTGGTCGCGTTGCTTTCCTTGAGC
AGCAGTAGCAATAGGAGCAGTAACAGCAGCAGTAGCAGTAGCAGCAGCAA
GGGGGTCAATACCAATAAACGGAGGCAGGATAACCCGTCCATTGCCCAAC
TCGTGTCCTGTGTTAATACTGACGATAATGACAAACTCGAGCAAGTCGTC
AATCGCTATGTCCTAGAGGAGTACGCGTCGAAGGGGGACCCCACCCTCTG
CACCCTCTTTTCCGACTTCCAAGTCTCCCTCGCTCAAGCCCGGTCAGGCC
GTGCCACCATCATCACGCGCCTCACCCACTTAGCACGTGCCCTGGAAGAG
TGGGTGAAGGAGGGAACAGTCGAAGGGAAGGGCTTGATTCAAGTCCAGGT
GCACCTAAAGGCAATTCTTGCCACTTGTGACTCAGCGACCGCGGCGGCAC
AGGAGAAGCGAGTAGCGGCTGCAGGGAATGGAGCTGGAGGGGTGACAGCG
AAGGCAAAGGGAAAAAAGAAGACTAAAATGCCCACAACTGATCCTACTAC
TGGTAACGGCAGCAGTAGCAGCATTGGCCTGACCCTCAAACTCCCCGGGA
ACCTCTCAGCCGCAGCTGCTGAGAAGGCTTGGTCCAAAATCCCGTCTCTC
GAAAACGCCCTCGAGGACTCGATGAATTATTTAATTAATCTCGATGCAGA
CACCCGATGGTTCGCTAAGCCTGTGTGGGAAGTGTGGCCTGACATAGAGC
AGGCCTACATAGCCGTTGTCCCTCACCCTATGGACCTGGGGACGATGAAA
AAGAGAATCAAGGCGGGAAAGGAGGGAGGTCACGGAGGATTCTATACCAG
TTTTGAGGCATTCGATAAGGACGCGGAGAGAGTGTTTGACAACTGCATGG
CCTTCAACCCCGTTGGAAAGCGCGATGGAGAAGAGGAAGAGTTGGGGGGG
GGAGGAGGAGGGGCAGGCGGAGGTGGGGGGGATTTGGTGAGTAAGGCGAC
GACGTCGACATTTGTGAGTACCGGGGAGGACATCGGTGGTGGAGGAGGAG
GAGGGGGAGGAGGGAGGGATCCGACGGTGCCGCAACCATTGCAGGGACGG
CCGAGGGTGGAAGGGCAGATGTGGGGGCAGGCACTAATGTTGTTGGCTGA
CCCCTTCGTGTTGCATGTGTTGGGCAAGACAGTGAAGCAACAGCTGGACG
AGGTGTATAAATCACATGGCCTCCCCAAGGATCACCCTCTCCTTCCCTCC
CTTCTTCAACTCCTCTTCCTGGGACTAGATGCCCGCCGACAACTAGTACT
AGTGCTTCACAAGCACAAAACCCCCGGCCCTCCCGCCCCTCCCGCCACCC
CTACTATGCTCTTGGCGAAGAAGGGAGGGAAGGCAGGCAATGTCGCCCCG
CGCCCCCCTAATCTTCCTCCAGGGTTTTCGATCCCTGACGCAAGAGTTAG
TCCGTTACTGGTCCGAGACAAGGATGGAGAGCTCGCGGCTGAGAATGATG
TACAAGAAGCTGCTCGAACTGTTTTACCCAGCTTATTAGAAATATTTGCG
CATGTGAACCTAGCACAGAAATACGAGGGAACGACGGAGGGATGGGAGGG
GCAGCCGCATGACAAGGAGGAGGTACAGGAAAAGATGCTTGAGAGCGTGG
GGAGGTTATACCGATCGTGTAAAGCTAGGCAGCCTTCTCCGCTTTTGTTG
TGCATGGTAAGTCATTCATTGTGTCATAGCCTCGCGACTGCTGATGATGC
AAGGACGACCCCTCTAGCCAAGACCCTGGCAGCACTGCTCGATCACTTGA
ACCGGAAAAAGAGGAGTGAGATGCTGCTTGCAACACCCGACCCCCAGGAC
CGGGGCCTGTGGATTTGTCTGGCGAGCGCCGGTTTGTTAAGAGTGCCGAG
AAAGAAGGCCAGGGTAACAGGAGCAGCACCAGCAGCAGTGGCAGCCAAGG
CGGCAGGTGGTGCTGCTGTCAATACTTCTGCAGCGACGACCACAGCCTCG
ACGCGTCCTCCCTTGGATCACGAACTTCGCGATTTGTTATTATCTCTGTT
TGTGAAGCAGCTACCATTTATACCTGAGCCTTGTTCTTTGTCATTTTGTC
ACGAGCAGGTTATGCGGTTGTTGTTGGGCTGGATGGCGCGAGGGGCGTTT
CTTAAGCCGAAGAGGAGGGATGGAGGAGGGGAGGCCGACGAGGAGAGGGA
GAAGAAAGAGGAGAATGCGGTGAAGCTGTGGGTTGGGGAAATTGTGCAAG
GAGTGGGCGGATCGAAGGCGGTAAGGGAGGCATGGGAAAAGGAAAGATTC
CAACCCATGAGAAGGCACTATGAAAGATTGTTTGAGGCGGAGCCTTGGGC
AAAAGTGTTGGTATGGGGGGAGGAAAAGGAGGAGGCGAAGGAGGGAAACA
GGTTGGTGACGAACAAGGAAGGAAGAAAGAAAAATTGTGGGGTGAAGATC
GAGGAGGGAAGGGAGAGGAAGAGATAG

protein sequence of NO03G04230.1

>NO03G04230.1-protein ID=NO03G04230.1-protein|Name=NO03G04230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1309bp
MEAAGEDDKKPPDASFSKPIFLSVPESSAPGPTVLKLRATALTASASGGS
LSEAKLMDSSNKAAAAAAAAAATVEGGDSGNRVHVDGKQRVLPTLRKGSP
TQTTGAMDGSECVVDGDTKKRALPKLSLGGGGSGGGGETGGKKLKLIAPP
VTITASKPPGVGPALTLKSLVPEATASETSAPVRLKWGVALNSSATAKPK
LVVGTTNRATVTTAHAPPSPLPQPPSSATLLRSPTPSTRMEVVVATPAVQ
TTSPSDTASTPISVMTAAKASAAAAEIPLSPAPAALSTQPILKRKTFITN
TPKSSIRTLPSTSPKELTQIRGPPVGNAAGRSLIKRGLREGDPRAFIHRF
QAENGLLSIPEAGPALQMLDVLGVPRLQVYHNLFTDLRARLEERVDRCTD
EQQLEKLLAQSFGYLTMAELKSIPERIIVKLRRVPARFLDRLAARPQILE
GLPMKVKQQAWEAHPGLFRRGLVGMVDAYLGNRASVVMPAHDVVALLSLS
SSSNRSSNSSSSSSSSKGVNTNKRRQDNPSIAQLVSCVNTDDNDKLEQVV
NRYVLEEYASKGDPTLCTLFSDFQVSLAQARSGRATIITRLTHLARALEE
WVKEGTVEGKGLIQVQVHLKAILATCDSATAAAQEKRVAAAGNGAGGVTA
KAKGKKKTKMPTTDPTTGNGSSSSIGLTLKLPGNLSAAAAEKAWSKIPSL
ENALEDSMNYLINLDADTRWFAKPVWEVWPDIEQAYIAVVPHPMDLGTMK
KRIKAGKEGGHGGFYTSFEAFDKDAERVFDNCMAFNPVGKRDGEEEELGG
GGGGAGGGGGDLVSKATTSTFVSTGEDIGGGGGGGGGGRDPTVPQPLQGR
PRVEGQMWGQALMLLADPFVLHVLGKTVKQQLDEVYKSHGLPKDHPLLPS
LLQLLFLGLDARRQLVLVLHKHKTPGPPAPPATPTMLLAKKGGKAGNVAP
RPPNLPPGFSIPDARVSPLLVRDKDGELAAENDVQEAARTVLPSLLEIFA
HVNLAQKYEGTTEGWEGQPHDKEEVQEKMLESVGRLYRSCKARQPSPLLL
CMVSHSLCHSLATADDARTTPLAKTLAALLDHLNRKKRSEMLLATPDPQD
RGLWICLASAGLLRVPRKKARVTGAAPAAVAAKAAGGAAVNTSAATTTAS
TRPPLDHELRDLLLSLFVKQLPFIPEPCSLSFCHEQVMRLLLGWMARGAF
LKPKRRDGGGEADEEREKKEENAVKLWVGEIVQGVGGSKAVREAWEKERF
QPMRRHYERLFEAEPWAKVLVWGEEKEEAKEGNRLVTNKEGRKKNCGVKI
EEGRERKR*

mRNA from alignment at chr3:1220275..1224281-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G04230.1 ID=NO03G04230.1|Name=NO03G04230.1|organism=Nannochloropsis oceanica|type=mRNA|length=4007bp|location=Sequence derived from alignment at chr3:1220275..1224281- (Nannochloropsis oceanica)
ATGGAAGCAGCAGGAGAGGATGACAAGAAACCCCCCGATGCCAGCTTCAG
CAAACCAATATTCCTTTCTGTCCCCGAGAGCAGTGCTCCTGGCCCGACCG
TCCTCAAGCTACGAGCCACCGCCTTGACAGCCTCAGCTTCCGGCGGGTCC
TTGTCCGAAGCCAAATTGATGGACTCATCAAATAAAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCGACGGTCGAGGGGGGAGACAGTGGCAACCGTGTCC
ATGTCGATGGAAAGCAGCGTGTGCTGCCGACACTCCGAAAGGGGTCACCC
ACACAAACCACAGGTGCGATGGACGGAAGCGAATGTGTTGTCGATGGAGA
TACCAAGAAACGGGCATTGCCGAAGTTGAGTCTAGGTGGCGGTGGCAGCG
GTGGCGGAGGAGAAACAGGAGGGAAGAAACTTAAATTGATTGCCCCGCCC
GTGACGATTACAGCAAGCAAGCCGCCAGGCGTTGGTCCAGCCCTCACTTT
GAAGAGCCTTGTGCCTGAAGCTACAGCTAGTGAAACAAGCGCACCCGTGC
GGCTTAAATGGGGTGTTGCCCTCAATTCCTCTGCCACAGCAAAGCCCAAG
CTAGTTGTAGGGACGACAAATAGAGCAACAGTTACAACCGCGCACGCCCC
ACCATCTCCTCTTCCTCAGCCTCCGTCATCTGCTACTCTTCTGCGATCAC
CCACCCCTTCCACGCGCATGGAAGTAGTGGTAGCAACCCCTGCAGTCCAG
ACAACATCTCCCTCCGACACTGCCTCCACTCCTATATCCGTAATGACCGC
AGCAAAAGCATCAGCAGCTGCTGCTGAAATTCCACTCAGCCCAGCCCCTG
CCGCACTTTCCACACAGCCAATCCTCAAGAGGAAAACATTTATAACAAAC
ACCCCCAAGTCATCCATCCGCACCTTGCCTTCTACCAGCCCCAAGGAGCT
GACGCAGATCCGTGGTCCCCCAGTCGGAAACGCCGCCGGCCGGTCGCTTA
TCAAAAGAGGGCTGCGGGAAGGTGACCCCCGCGCGTTCATCCATCGTTTT
CAAGCGGAGAATGGTCTATTGTCCATTCCAGAAGCGGGGCCTGCACTGCA
GATGCTTGATGTGCTGGGTGTCCCTCGATTGCAAGTGTACCATAATTTAT
TTACTGATCTCCGGGCACGTTTGGAGGAGAGAGTGGATAGGTGTACGGAT
GAACAACAGCTGGAGAAGTTGTTGGCACAGAGCTTCGGGTATTTGACGAT
GGCGGAGCTGAAGTCAATCCCGGAGAGAATAATTGTAAAACTACGACGAG
TGCCGGCTCGATTTCTGGACCGACTGGCGGCGCGTCCGCAGATTCTGGAG
GGGCTGCCGATGAAAGTGAAGCAACAGGCGTGGGAGGCGCATCCAGGGTT
GTTTCGAAGGGGGTTGGTGGGTATGGTGGATGCATATTTGGGGAATCGAG
CCTCGGTTGTCATGCCGGCACATGATGTGGTCGCGTTGCTTTCCTTGAGC
AGCAGTAGCAATAGGAGCAGTAACAGCAGCAGTAGCAGTAGCAGCAGCAA
GGGGGTCAATACCAATAAACGGAGGCAGGATAACCCGTCCATTGCCCAAC
TCGTGTCCTGTGTTAATACTGACGATAATGACAAACTCGAGCAAGTCGTC
AATCGCTATGTCCTAGAGGAGTACGCGTCGAAGGGGGACCCCACCCTCTG
CACCCTCTTTTCCGACTTCCAAGTCTCCCTCGCTCAAGCCCGGTCAGGCC
GTGCCACCATCATCACGCGCCTCACCCACTTAGCACGTGCCCTGGAAGAG
TGGGTGAAGGAGGGAACAGTCGAAGGGAAGGGCTTGATTCAAGTCCAGGT
GCACCTAAAGGCAATTCTTGCCACTTGTGACTCAGCGACCGCGGCGGCAC
AGGAGAAGCGAGTAGCGGCTGCAGGGAATGGAGCTGGAGGGGTGACAGCG
AAGGCAAAGGGAAAAAAGAAGACTAAAATGCCCACAACTGATCCTACTAC
TGGTAACGGCAGCAGTAGCAGCATTGGCCTGACCCTCAAACTCCCCGGGA
ACCTCTCAGCCGCAGCTGCTGAGAAGGCTTGGTCCAAAATCCCGTCTCTC
GAAAACGCCCTCGAGGACTCGATGAATTATTTAATTAATCTCGATGCAGA
CACCCGATGGTTCGCTAAGCCTGTGTGGGAAGTGTGGCCTGACATAGAGC
AGGCCTACATAGCCGTTGTCCCTCACCCTATGGACCTGGGGACGATGAAA
AAGAGAATCAAGGCGGGAAAGGAGGGAGGTCACGGAGGATTCTATACCAG
TTTTGAGGCATTCGATAAGGACGCGGAGAGAGTGTTTGACAACTGCATGG
CCTTCAACCCCGTTGGAAGTACGTTTTATGTGGGAGCGGAGAGGATGAAG
AAGAACTGGATGAAATATAAGGTAAAATTCAAAAATGTGGATGTGAAGAG
CGCGATGGAGAAGAGGAAGAGTTGGGGGGGGGAGGAGGAGGGGCAGGCGG
AGGTGGGGGGGATTTGGTGAGTAAGGCGACGACGTCGACATTTGTGAGTA
CCGGGGAGGACATCGGTGGTGGAGGAGGAGGAGGGGGAGGAGGGAGGGAT
CCGACGGTGCCGCAACCATTGCAGGGACGGCCGAGGGTGGAAGGGCAGAT
GTGGGGGCAGGCACTAATGTTGTTGGCTGACCCCTTCGTGTTGCATGTGT
TGGGCAAGACAGTGAAGCAACAGCTGGACGAGGTGTATAAATCACATGGC
CTCCCCAAGGATCACCCTCTCCTTCCCTCCCTTCTTCAACTCCTCTTCCT
GGGACTAGATGCCCGCCGACAACTAGTACTAGTGCTTCACAAGCACAAAA
CCCCCGGCCCTCCCGCCCCTCCCGCCACCCCTACTATGCTCTTGGCGAAG
AAGGGAGGGAAGGCAGGCAATGTCGCCCCGCGCCCCCCTAATCTTCCTCC
AGGGTTTTCGATCCCTGACGCAAGAGTTAGTCCGTTACTGGTCCGAGACA
AGGATGGAGAGCTCGCGGCTGAGAATGATGTACAAGAAGCTGCTCGAACT
GTTTTACCCAGCTTATTAGAAATATTTGCGCATGTGAACCTAGCACAGAA
ATACGAGGGAACGACGGAGGGATGGGAGGGGCAGCCGCATGACAAGGAGG
AGGTACAGGAAAAGATGCTTGAGAGCGTGGGGAGGTTATACCGATCGTGT
AAAGCTAGGCAGCCTTCTCCGCTTTTGTTGTGCATGGTAAGTCATTCATT
GTGTCATAGCCTCGCGACTGCTGATGATGCAAGGACGACCCCTCTAGCCA
AGACCCTGGCAGCACTGCTCGATCACTTGAACCGGAAAAAGAGGAGTGAG
ATGCTGCTTGCAACACCCGACCCCCAGGACCGGGGCCTGTGGATTTGTCT
GGCGAGCGCCGGTTTGTTAAGAGTGCCGAGAAAGAAGGCCAGGGTAACAG
GAGCAGCACCAGCAGCAGTGGCAGCCAAGGCGGCAGGTGGTGCTGCTGTC
AATACTTCTGCAGCGACGACCACAGCCTCGACGCGTCCTCCCTTGGATCA
CGAACTTCGCGATTTGTTATTATCTCTGTTTGTGAAGCAGCTACCATTTA
TACCTGAGCCTTGTTCTTTGTCATTTTGTCACGAGCAGGTTATGCGGTTG
TTGTTGGGCTGGATGGCGCGAGGGGCGTTTCTTAAGCCGAAGAGGAGGGA
TGGAGGAGGGGAGGCCGACGAGGAGAGGGAGAAGAAAGAGGAGAATGCGG
TGAAGCTGTGGGTTGGGGAAATTGTGCAAGGAGTGGGCGGATCGAAGGCG
GTAAGGGAGGCATGGGAAAAGGAAAGATTCCAACCCATGAGAAGGCACTA
TGAAAGATTGTTTGAGGCGGAGCCTTGGGCAAAAGTGTTGGTATGGGGGG
AGGAAAAGGAGGAGGCGAAGGAGGGAAACAGGTTGGTGACGAACAAGGAA
GGAAGAAAGAAAAATTGTGGGGTGAAGATCGAGGAGGGAAGGGAGAGGAA
GAGATAG

Coding sequence (CDS) from alignment at chr3:1220275..1224281-

>NO03G04230.1 ID=NO03G04230.1|Name=NO03G04230.1|organism=Nannochloropsis oceanica|type=CDS|length=3927bp|location=Sequence derived from alignment at chr3:1220275..1224281- (Nannochloropsis oceanica)
ATGGAAGCAGCAGGAGAGGATGACAAGAAACCCCCCGATGCCAGCTTCAG
CAAACCAATATTCCTTTCTGTCCCCGAGAGCAGTGCTCCTGGCCCGACCG
TCCTCAAGCTACGAGCCACCGCCTTGACAGCCTCAGCTTCCGGCGGGTCC
TTGTCCGAAGCCAAATTGATGGACTCATCAAATAAAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCGACGGTCGAGGGGGGAGACAGTGGCAACCGTGTCC
ATGTCGATGGAAAGCAGCGTGTGCTGCCGACACTCCGAAAGGGGTCACCC
ACACAAACCACAGGTGCGATGGACGGAAGCGAATGTGTTGTCGATGGAGA
TACCAAGAAACGGGCATTGCCGAAGTTGAGTCTAGGTGGCGGTGGCAGCG
GTGGCGGAGGAGAAACAGGAGGGAAGAAACTTAAATTGATTGCCCCGCCC
GTGACGATTACAGCAAGCAAGCCGCCAGGCGTTGGTCCAGCCCTCACTTT
GAAGAGCCTTGTGCCTGAAGCTACAGCTAGTGAAACAAGCGCACCCGTGC
GGCTTAAATGGGGTGTTGCCCTCAATTCCTCTGCCACAGCAAAGCCCAAG
CTAGTTGTAGGGACGACAAATAGAGCAACAGTTACAACCGCGCACGCCCC
ACCATCTCCTCTTCCTCAGCCTCCGTCATCTGCTACTCTTCTGCGATCAC
CCACCCCTTCCACGCGCATGGAAGTAGTGGTAGCAACCCCTGCAGTCCAG
ACAACATCTCCCTCCGACACTGCCTCCACTCCTATATCCGTAATGACCGC
AGCAAAAGCATCAGCAGCTGCTGCTGAAATTCCACTCAGCCCAGCCCCTG
CCGCACTTTCCACACAGCCAATCCTCAAGAGGAAAACATTTATAACAAAC
ACCCCCAAGTCATCCATCCGCACCTTGCCTTCTACCAGCCCCAAGGAGCT
GACGCAGATCCGTGGTCCCCCAGTCGGAAACGCCGCCGGCCGGTCGCTTA
TCAAAAGAGGGCTGCGGGAAGGTGACCCCCGCGCGTTCATCCATCGTTTT
CAAGCGGAGAATGGTCTATTGTCCATTCCAGAAGCGGGGCCTGCACTGCA
GATGCTTGATGTGCTGGGTGTCCCTCGATTGCAAGTGTACCATAATTTAT
TTACTGATCTCCGGGCACGTTTGGAGGAGAGAGTGGATAGGTGTACGGAT
GAACAACAGCTGGAGAAGTTGTTGGCACAGAGCTTCGGGTATTTGACGAT
GGCGGAGCTGAAGTCAATCCCGGAGAGAATAATTGTAAAACTACGACGAG
TGCCGGCTCGATTTCTGGACCGACTGGCGGCGCGTCCGCAGATTCTGGAG
GGGCTGCCGATGAAAGTGAAGCAACAGGCGTGGGAGGCGCATCCAGGGTT
GTTTCGAAGGGGGTTGGTGGGTATGGTGGATGCATATTTGGGGAATCGAG
CCTCGGTTGTCATGCCGGCACATGATGTGGTCGCGTTGCTTTCCTTGAGC
AGCAGTAGCAATAGGAGCAGTAACAGCAGCAGTAGCAGTAGCAGCAGCAA
GGGGGTCAATACCAATAAACGGAGGCAGGATAACCCGTCCATTGCCCAAC
TCGTGTCCTGTGTTAATACTGACGATAATGACAAACTCGAGCAAGTCGTC
AATCGCTATGTCCTAGAGGAGTACGCGTCGAAGGGGGACCCCACCCTCTG
CACCCTCTTTTCCGACTTCCAAGTCTCCCTCGCTCAAGCCCGGTCAGGCC
GTGCCACCATCATCACGCGCCTCACCCACTTAGCACGTGCCCTGGAAGAG
TGGGTGAAGGAGGGAACAGTCGAAGGGAAGGGCTTGATTCAAGTCCAGGT
GCACCTAAAGGCAATTCTTGCCACTTGTGACTCAGCGACCGCGGCGGCAC
AGGAGAAGCGAGTAGCGGCTGCAGGGAATGGAGCTGGAGGGGTGACAGCG
AAGGCAAAGGGAAAAAAGAAGACTAAAATGCCCACAACTGATCCTACTAC
TGGTAACGGCAGCAGTAGCAGCATTGGCCTGACCCTCAAACTCCCCGGGA
ACCTCTCAGCCGCAGCTGCTGAGAAGGCTTGGTCCAAAATCCCGTCTCTC
GAAAACGCCCTCGAGGACTCGATGAATTATTTAATTAATCTCGATGCAGA
CACCCGATGGTTCGCTAAGCCTGTGTGGGAAGTGTGGCCTGACATAGAGC
AGGCCTACATAGCCGTTGTCCCTCACCCTATGGACCTGGGGACGATGAAA
AAGAGAATCAAGGCGGGAAAGGAGGGAGGTCACGGAGGATTCTATACCAG
TTTTGAGGCATTCGATAAGGACGCGGAGAGAGTGTTTGACAACTGCATGG
CCTTCAACCCCGTTGGAAAGCGCGATGGAGAAGAGGAAGAGTTGGGGGGG
GGAGGAGGAGGGGCAGGCGGAGGTGGGGGGGATTTGGTGAGTAAGGCGAC
GACGTCGACATTTGTGAGTACCGGGGAGGACATCGGTGGTGGAGGAGGAG
GAGGGGGAGGAGGGAGGGATCCGACGGTGCCGCAACCATTGCAGGGACGG
CCGAGGGTGGAAGGGCAGATGTGGGGGCAGGCACTAATGTTGTTGGCTGA
CCCCTTCGTGTTGCATGTGTTGGGCAAGACAGTGAAGCAACAGCTGGACG
AGGTGTATAAATCACATGGCCTCCCCAAGGATCACCCTCTCCTTCCCTCC
CTTCTTCAACTCCTCTTCCTGGGACTAGATGCCCGCCGACAACTAGTACT
AGTGCTTCACAAGCACAAAACCCCCGGCCCTCCCGCCCCTCCCGCCACCC
CTACTATGCTCTTGGCGAAGAAGGGAGGGAAGGCAGGCAATGTCGCCCCG
CGCCCCCCTAATCTTCCTCCAGGGTTTTCGATCCCTGACGCAAGAGTTAG
TCCGTTACTGGTCCGAGACAAGGATGGAGAGCTCGCGGCTGAGAATGATG
TACAAGAAGCTGCTCGAACTGTTTTACCCAGCTTATTAGAAATATTTGCG
CATGTGAACCTAGCACAGAAATACGAGGGAACGACGGAGGGATGGGAGGG
GCAGCCGCATGACAAGGAGGAGGTACAGGAAAAGATGCTTGAGAGCGTGG
GGAGGTTATACCGATCGTGTAAAGCTAGGCAGCCTTCTCCGCTTTTGTTG
TGCATGGTAAGTCATTCATTGTGTCATAGCCTCGCGACTGCTGATGATGC
AAGGACGACCCCTCTAGCCAAGACCCTGGCAGCACTGCTCGATCACTTGA
ACCGGAAAAAGAGGAGTGAGATGCTGCTTGCAACACCCGACCCCCAGGAC
CGGGGCCTGTGGATTTGTCTGGCGAGCGCCGGTTTGTTAAGAGTGCCGAG
AAAGAAGGCCAGGGTAACAGGAGCAGCACCAGCAGCAGTGGCAGCCAAGG
CGGCAGGTGGTGCTGCTGTCAATACTTCTGCAGCGACGACCACAGCCTCG
ACGCGTCCTCCCTTGGATCACGAACTTCGCGATTTGTTATTATCTCTGTT
TGTGAAGCAGCTACCATTTATACCTGAGCCTTGTTCTTTGTCATTTTGTC
ACGAGCAGGTTATGCGGTTGTTGTTGGGCTGGATGGCGCGAGGGGCGTTT
CTTAAGCCGAAGAGGAGGGATGGAGGAGGGGAGGCCGACGAGGAGAGGGA
GAAGAAAGAGGAGAATGCGGTGAAGCTGTGGGTTGGGGAAATTGTGCAAG
GAGTGGGCGGATCGAAGGCGGTAAGGGAGGCATGGGAAAAGGAAAGATTC
CAACCCATGAGAAGGCACTATGAAAGATTGTTTGAGGCGGAGCCTTGGGC
AAAAGTGTTGGTATGGGGGGAGGAAAAGGAGGAGGCGAAGGAGGGAAACA
GGTTGGTGACGAACAAGGAAGGAAGAAAGAAAAATTGTGGGGTGAAGATC
GAGGAGGGAAGGGAGAGGAAGAGATAG

Synonyms

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