NO03G02160.1, NO03G02160.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G02160.1
Unique Name	NO03G02160.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3147
Alignment location	chr3:641561..644707 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:641561..644707 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G02160.1 vs.
Match: EWM29682.1 (protein nlrc3 [Nannochloropsis gaditana])

HSP 1 Score: 852.4 bits (2201), Expect = 1.400e-243
Identity = 550/1039 (52.94%), Postives = 652/1039 (62.75%), Query Frame = 0

Query:    6 TTPATFSPQQPPSLAPP--AAAPPTPVAAAMAASLASSSSSSGAGLSPARHVYSFPPCVVGSGNGSSSRI-GDASSNSDNMRMGCVTPYISPTTRNRNGELALGRSSSAPLLAPGASATAAITEPDAKTLSMRDELQCSSGHLSRTGPSTVAGVGEV-QGSNTANSQASKLATTTFASTTRNTTKALLRKLGILSSNPLSSDKSS------------MAAGVGAAGAGAGKSEK-HIPRPHYEHQYQQQHQQQQDRAHHSSCNRFPSPSSPSCFISRNRTGELIPSKQNSKNINGNSHHGGVPTDLVLDNKHITGPQAKKLCTALGSDTTIVSLKVGCNELGDEGAAAVAQALAHHPSLVTLDLGFNGIGDRGAEALGRSLCLNRCLKTLYLSGNCIGAAGAQGLGQALRHNVSLEVLHLTGNAIGQGGAAALAEGLVQNRSLQRLYLAGNALGPRGSAELFRGLARNTGLVCLFLSDNGIGDEGAMALAGALVQHGRLQVLELGFNGLTAIGLAPLLAALKGCTSLQFLRLDNNEVDNRGAAEIARALPALPGLRLLDVGFNSIRTEGIAALMRSVAGHTGLRALTLSGNTLKTEGAKAVAEALLHNSTLQELHLDHTSVGQAGERFLASGLEGNPYPNLCVLTGLRLGYVLAHLGGAYPQALEALSNDQSLEFLRMRRREPAADYRHLVATAAATVTVSRGVVSFPPPPLPVHSMVFGQNGVREGG--RGEMGKASTTHSGSNCDEVAMMMLSTPPLPNFYSRSSNHQDRQGNRSHHHHNQEQQQQPQQQRQQYHHQPPPHPPRVNSPYTCPYPQSQTLPYPHTAPLPPSVIHGLVACTHAPFDPAELFSLHQFYFSPPPNPVGATPISNTSSPEQHYYHHRGALMGGGREKGDAEAAAFYAQQQQLQQQQQLLAARGAAGQPVQGFVVNGGGGEGGGEKLAVAGNNVMMMMRVESEAHLPPTKRQCNNTTRVRVGVYPRLQQQLEVMLKENGSQDGKVLVLLRQLRFLEESVGAGGEPPYTPEMLEGVLLDALAMA 1026
            TTPA ++PQQPPS+  P  A A   P  AAMAA +A   S     + PAR +Y F P   G+G G+ +   G  + N + +         S +TRNR+ +L L R SSAP+LA       A  E     + +  + +  + H      + V+G+ E  +G +              AS +R+TTKALLRKLGIL+  P S+   +            MA   GA+ AGA +      PR            +   RA HSS +        S +  R   G+      +  N        GVP DL L NK ITGPQAKKLC AL +DT++VSLKVGCNELGDEGA AVAQALAHHPSL+TLDLGFNGIGDRGAEAL  SL  NR LKTLYLSGNCIG  GAQ LG+AL+ N+SLEVLHLTGNA+  GGAA + +GL  NRSL+ LYLAGNALGP+GSAELF GLARN GL CLFLSD+GIGDEGA+ALAGAL++H RL+VLELGFN LTA+G+APLLAAL+GCT LQ LRLDNNEVDN GAAE+ARAL AL  L++LDVGFN++R++G+A LMR+VAGH  LRALTLSGNTLKTEGAKAVAEALL N+ LQEL+LDHTS+G AGERFLASGL GNP   LCVLTGLRLG VLA LGG  PQ L+ALSN+QSL FLR++RREP AD R LVA  AA +  +R   S   P  P    V G  G   G   +GE         G   DE AMMMLSTPPLP FYSRS       G   H H  ++Q                 HPP   +                   LPP++  GLV CT APFD AEL +LH FYFSPPPN VG T +   S P QHYYHHRG+L+GG R++ +AEAAA YAQQQ   +       R AAG   +                A+AGN VMMMMRVESEAHLPPTKRQCN  +RVRV  YP LQ++LEVML   G ++ +VL LLRQLRFLEE+VG   +P YTPE LE VLL +L+ A
Sbjct:    3 TTPAAYAPQQPPSIQTPPSATAQSMPHPAAMAAPIAPQPS-----IGPARCLYPFQPST-GNGMGNMNNPQGSDNGNENFIEAHSDALKDSSSTRNRS-DLVLSRPSSAPMLAE----ICAAAEGGGSDVPLTRDREAFAWHQKELPAAAVSGLDEEGKGGHVV------------ASASRSTTKALLRKLGILAP-PASTSACARSVATRAVQGWQMANKQGASEAGAARGPPTRGPRT----------LRAPARASHSSTD------PASAWKDRASNGQEESDIVDRVN--------GVPRDLELQNKRITGPQAKKLCAALATDTSLVSLKVGCNELGDEGAEAVAQALAHHPSLITLDLGFNGIGDRGAEALAGSLWSNRRLKTLYLSGNCIGVRGAQALGRALQQNMSLEVLHLTGNAVSAGGAALMGQGLAHNRSLRSLYLAGNALGPQGSAELFGGLARNAGLECLFLSDSGIGDEGAVALAGALLRHRRLRVLELGFNRLTAVGIAPLLAALQGCTHLQVLRLDNNEVDNGGAAEVARALHALTDLQVLDVGFNAMRSDGVATLMRAVAGHASLRALTLSGNTLKTEGAKAVAEALLQNNCLQELYLDHTSIGSAGERFLASGLAGNPCLGLCVLTGLRLGNVLARLGGGQPQGLDALSNEQSLAFLRLKRREPEADVRQLVAMVAARMPAARNSAS--SPRTPASWSVQGGGGCEGGAATKGEEKAGLGASGGGGWDETAMMMLSTPPLPTFYSRSG------GQEKHAHRPRDQ----------------VHPPDGMA----------------AGSLPPALACGLVNCTKAPFDGAELSALHHFYFSPPPNAVG-TAMGTVSPPGQHYYHHRGSLIGGRRDEAEAEAAAAYAQQQNALESASSGQERLAAGSASE-------------NAAAIAGNKVMMMMRVESEAHLPPTKRQCNLNSRVRVAAYPHLQRRLEVMLSNRGREEPQVLTLLRQLRFLEENVGPASKPCYTPETLENVLLRSLSTA 939

The following BLAST results are available for this feature:

BLAST of NO03G02160.1 vs.

BLAST of NO03G02160.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29682.1	1.400e-243	52.94	protein nlrc3 [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G02160	NO03G02160	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G02160.1	NO03G02160.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G02160.1.cds1	NO03G02160.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:641561..644707-
coding sequence from alignment at chr3:641561..644707-

mRNA sequence

>NO03G02160.1 ID=NO03G02160.1|Name=NO03G02160.1|organism=Nannochloropsis oceanica|type=mRNA|length=3147bp
ATGGCAACCACTACCACCACCCCTGCGACATTCTCCCCGCAGCAGCCCCC
ATCACTAGCACCACCAGCAGCAGCACCCCCAACGCCGGTGGCCGCCGCAA
TGGCTGCGTCGCTTGCGAGCTCGTCCTCCTCTTCCGGGGCGGGCCTATCT
CCCGCCCGACACGTGTACTCTTTTCCTCCCTGCGTCGTAGGCAGCGGAAA
CGGCAGTAGTAGCAGAATTGGTGATGCGAGCAGCAACAGTGATAATATGC
GCATGGGTTGCGTTACTCCTTACATCTCCCCCACCACTCGAAACCGGAAT
GGCGAACTCGCCTTGGGCCGCTCGTCGAGCGCACCCTTGCTAGCACCAGG
CGCATCAGCAACAGCAGCTATCACAGAACCAGACGCCAAGACCCTCTCGA
TGAGAGACGAATTGCAGTGCAGTAGCGGTCATTTATCGCGAACGGGACCG
TCGACGGTTGCTGGAGTAGGAGAGGTTCAGGGGAGCAACACTGCCAACAG
CCAGGCGTCAAAGTTAGCGACCACAACTTTCGCCTCCACGACCCGCAACA
CCACCAAAGCCTTGCTTCGAAAACTCGGCATTTTGTCATCGAATCCCTTG
TCATCCGACAAAAGCAGCATGGCTGCCGGAGTAGGAGCAGCAGGAGCAGG
AGCAGGGAAATCCGAGAAACACATACCACGACCACATTACGAGCATCAGT
ATCAGCAGCAACATCAGCAGCAACAGGACCGAGCGCACCATAGCAGCTGT
AACAGATTCCCATCTCCCTCTTCTCCATCATGCTTCATTAGCAGAAATAG
GACAGGGGAGCTGATACCCTCGAAACAAAACAGCAAAAACATAAACGGCA
ACAGCCACCATGGCGGTGTGCCCACCGACCTTGTCCTAGATAACAAGCAC
ATTACCGGCCCTCAGGCAAAAAAACTCTGTACGGCCTTAGGCAGCGACAC
GACCATTGTCAGCCTGAAGGTCGGTTGCAACGAATTAGGAGACGAAGGAG
CAGCAGCTGTGGCCCAAGCGCTGGCGCACCACCCTTCGTTAGTAACACTC
GATTTGGGATTTAATGGAATAGGAGATCGAGGAGCAGAAGCTTTGGGTCG
AAGTCTCTGCTTGAATCGTTGTCTGAAAACGCTATATCTATCTGGGAATT
GTATTGGTGCCGCAGGCGCTCAGGGACTTGGACAGGCTTTACGGCACAAT
GTCAGCTTGGAGGTGCTTCATCTGACAGGGAATGCGATAGGACAAGGGGG
GGCAGCGGCCTTAGCAGAAGGGTTAGTACAAAACCGGTCGCTCCAAAGAC
TTTATCTGGCGGGCAACGCGTTGGGTCCGCGCGGAAGTGCCGAGCTTTTC
CGTGGGTTGGCGCGAAACACGGGTTTGGTGTGTTTGTTTTTGAGTGATAA
TGGAATCGGAGACGAGGGGGCCATGGCGCTGGCAGGGGCGTTGGTGCAGC
ACGGGCGGTTGCAGGTGTTGGAGTTGGGTTTCAACGGATTGACTGCCATA
GGATTGGCTCCTCTCCTTGCTGCCTTGAAAGGTTGCACCTCCCTCCAATT
TCTTCGGTTGGACAACAATGAAGTGGACAATCGAGGCGCGGCGGAAATAG
CTCGTGCGCTGCCGGCACTACCCGGGCTGAGACTTTTGGATGTTGGATTC
AACTCGATTCGAACGGAGGGGATAGCGGCGCTCATGCGGTCTGTTGCAGG
GCATACGGGCCTCCGAGCGCTGACGTTATCCGGTAATACGCTCAAGACGG
AGGGAGCGAAGGCTGTTGCTGAGGCGCTGTTGCACAATAGCACCTTGCAA
GAGCTTCACCTCGATCATACATCCGTGGGGCAGGCGGGTGAGAGGTTTTT
GGCCTCTGGATTGGAAGGGAATCCGTACCCGAACTTGTGCGTGTTGACGG
GGTTGAGGCTCGGCTATGTCCTGGCGCATTTGGGAGGAGCATACCCGCAG
GCGTTGGAGGCTTTGAGCAACGATCAAAGCCTGGAGTTTTTGCGGATGAG
ACGCCGGGAGCCCGCGGCAGATTATCGGCATTTGGTAGCAACAGCTGCGG
CAACTGTGACCGTTTCTCGGGGCGTCGTATCGTTTCCTCCTCCTCCACTA
CCAGTGCATTCGATGGTGTTCGGACAGAATGGAGTTAGAGAGGGAGGAAG
AGGGGAAATGGGGAAAGCGAGCACTACTCACAGTGGAAGCAACTGTGACG
AAGTAGCCATGATGATGCTGAGCACCCCGCCCTTGCCAAACTTTTATTCC
CGGAGCAGCAATCATCAAGACAGACAGGGGAATCGTTCTCACCACCACCA
CAACCAGGAGCAGCAGCAGCAGCCGCAGCAGCAGCGGCAGCAGTACCACC
ATCAGCCACCACCACATCCCCCCCGCGTCAATTCCCCCTATACCTGCCCC
TATCCTCAGTCCCAAACCCTACCCTATCCACACACCGCTCCCCTTCCTCC
TTCTGTCATACACGGACTTGTGGCCTGCACACATGCCCCTTTCGACCCTG
CTGAACTCTTCTCCTTGCACCAATTCTACTTCTCCCCCCCACCCAATCCT
GTTGGGGCGACCCCAATAAGCAATACATCATCTCCAGAACAGCATTACTA
TCACCATCGTGGGGCTCTGATGGGAGGAGGGAGGGAGAAAGGGGACGCGG
AAGCTGCCGCATTTTATGCGCAGCAGCAGCAACTACAACAACAACAGCAA
TTGTTGGCAGCGAGAGGGGCGGCGGGACAACCAGTGCAGGGGTTTGTGGT
TAATGGAGGAGGAGGGGAAGGAGGAGGGGAGAAGTTAGCAGTTGCTGGGA
ATAATGTCATGATGATGATGAGGGTCGAGAGCGAGGCGCACTTGCCACCG
ACGAAGAGGCAATGTAACAACACGACACGGGTGCGTGTGGGGGTTTACCC
GCGCTTGCAGCAGCAATTGGAGGTCATGTTGAAGGAGAATGGGAGCCAGG
ATGGGAAAGTGTTGGTGTTGTTGAGACAGTTGCGGTTTTTGGAAGAAAGC
GTGGGGGCGGGCGGGGAGCCACCTTACACACCCGAGATGCTCGAAGGTGT
TTTGTTGGATGCCTTGGCGATGGCGGAGGTTGGGTTGCTCCCCGGGGGGG
GAAACGGAGGGGGGGGAGGGCAGAAAGGGCAAAGCAATTTTAGATGA

protein sequence of NO03G02160.1

>NO03G02160.1-protein ID=NO03G02160.1-protein|Name=NO03G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1049bp
MATTTTTPATFSPQQPPSLAPPAAAPPTPVAAAMAASLASSSSSSGAGLS
PARHVYSFPPCVVGSGNGSSSRIGDASSNSDNMRMGCVTPYISPTTRNRN
GELALGRSSSAPLLAPGASATAAITEPDAKTLSMRDELQCSSGHLSRTGP
STVAGVGEVQGSNTANSQASKLATTTFASTTRNTTKALLRKLGILSSNPL
SSDKSSMAAGVGAAGAGAGKSEKHIPRPHYEHQYQQQHQQQQDRAHHSSC
NRFPSPSSPSCFISRNRTGELIPSKQNSKNINGNSHHGGVPTDLVLDNKH
ITGPQAKKLCTALGSDTTIVSLKVGCNELGDEGAAAVAQALAHHPSLVTL
DLGFNGIGDRGAEALGRSLCLNRCLKTLYLSGNCIGAAGAQGLGQALRHN
VSLEVLHLTGNAIGQGGAAALAEGLVQNRSLQRLYLAGNALGPRGSAELF
RGLARNTGLVCLFLSDNGIGDEGAMALAGALVQHGRLQVLELGFNGLTAI
GLAPLLAALKGCTSLQFLRLDNNEVDNRGAAEIARALPALPGLRLLDVGF
NSIRTEGIAALMRSVAGHTGLRALTLSGNTLKTEGAKAVAEALLHNSTLQ
ELHLDHTSVGQAGERFLASGLEGNPYPNLCVLTGLRLGYVLAHLGGAYPQ
ALEALSNDQSLEFLRMRRREPAADYRHLVATAAATVTVSRGVVSFPPPPL
PVHSMVFGQNGVREGGRGEMGKASTTHSGSNCDEVAMMMLSTPPLPNFYS
RSSNHQDRQGNRSHHHHNQEQQQQPQQQRQQYHHQPPPHPPRVNSPYTCP
YPQSQTLPYPHTAPLPPSVIHGLVACTHAPFDPAELFSLHQFYFSPPPNP
VGATPISNTSSPEQHYYHHRGALMGGGREKGDAEAAAFYAQQQQLQQQQQ
LLAARGAAGQPVQGFVVNGGGGEGGGEKLAVAGNNVMMMMRVESEAHLPP
TKRQCNNTTRVRVGVYPRLQQQLEVMLKENGSQDGKVLVLLRQLRFLEES
VGAGGEPPYTPEMLEGVLLDALAMAEVGLLPGGGNGGGGGQKGQSNFR*

mRNA from alignment at chr3:641561..644707-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G02160.1 ID=NO03G02160.1|Name=NO03G02160.1|organism=Nannochloropsis oceanica|type=mRNA|length=3147bp|location=Sequence derived from alignment at chr3:641561..644707- (Nannochloropsis oceanica)
ATGGCAACCACTACCACCACCCCTGCGACATTCTCCCCGCAGCAGCCCCC
ATCACTAGCACCACCAGCAGCAGCACCCCCAACGCCGGTGGCCGCCGCAA
TGGCTGCGTCGCTTGCGAGCTCGTCCTCCTCTTCCGGGGCGGGCCTATCT
CCCGCCCGACACGTGTACTCTTTTCCTCCCTGCGTCGTAGGCAGCGGAAA
CGGCAGTAGTAGCAGAATTGGTGATGCGAGCAGCAACAGTGATAATATGC
GCATGGGTTGCGTTACTCCTTACATCTCCCCCACCACTCGAAACCGGAAT
GGCGAACTCGCCTTGGGCCGCTCGTCGAGCGCACCCTTGCTAGCACCAGG
CGCATCAGCAACAGCAGCTATCACAGAACCAGACGCCAAGACCCTCTCGA
TGAGAGACGAATTGCAGTGCAGTAGCGGTCATTTATCGCGAACGGGACCG
TCGACGGTTGCTGGAGTAGGAGAGGTTCAGGGGAGCAACACTGCCAACAG
CCAGGCGTCAAAGTTAGCGACCACAACTTTCGCCTCCACGACCCGCAACA
CCACCAAAGCCTTGCTTCGAAAACTCGGCATTTTGTCATCGAATCCCTTG
TCATCCGACAAAAGCAGCATGGCTGCCGGAGTAGGAGCAGCAGGAGCAGG
AGCAGGGAAATCCGAGAAACACATACCACGACCACATTACGAGCATCAGT
ATCAGCAGCAACATCAGCAGCAACAGGACCGAGCGCACCATAGCAGCTGT
AACAGATTCCCATCTCCCTCTTCTCCATCATGCTTCATTAGCAGAAATAG
GACAGGGGAGCTGATACCCTCGAAACAAAACAGCAAAAACATAAACGGCA
ACAGCCACCATGGCGGTGTGCCCACCGACCTTGTCCTAGATAACAAGCAC
ATTACCGGCCCTCAGGCAAAAAAACTCTGTACGGCCTTAGGCAGCGACAC
GACCATTGTCAGCCTGAAGGTCGGTTGCAACGAATTAGGAGACGAAGGAG
CAGCAGCTGTGGCCCAAGCGCTGGCGCACCACCCTTCGTTAGTAACACTC
GATTTGGGATTTAATGGAATAGGAGATCGAGGAGCAGAAGCTTTGGGTCG
AAGTCTCTGCTTGAATCGTTGTCTGAAAACGCTATATCTATCTGGGAATT
GTATTGGTGCCGCAGGCGCTCAGGGACTTGGACAGGCTTTACGGCACAAT
GTCAGCTTGGAGGTGCTTCATCTGACAGGGAATGCGATAGGACAAGGGGG
GGCAGCGGCCTTAGCAGAAGGGTTAGTACAAAACCGGTCGCTCCAAAGAC
TTTATCTGGCGGGCAACGCGTTGGGTCCGCGCGGAAGTGCCGAGCTTTTC
CGTGGGTTGGCGCGAAACACGGGTTTGGTGTGTTTGTTTTTGAGTGATAA
TGGAATCGGAGACGAGGGGGCCATGGCGCTGGCAGGGGCGTTGGTGCAGC
ACGGGCGGTTGCAGGTGTTGGAGTTGGGTTTCAACGGATTGACTGCCATA
GGATTGGCTCCTCTCCTTGCTGCCTTGAAAGGTTGCACCTCCCTCCAATT
TCTTCGGTTGGACAACAATGAAGTGGACAATCGAGGCGCGGCGGAAATAG
CTCGTGCGCTGCCGGCACTACCCGGGCTGAGACTTTTGGATGTTGGATTC
AACTCGATTCGAACGGAGGGGATAGCGGCGCTCATGCGGTCTGTTGCAGG
GCATACGGGCCTCCGAGCGCTGACGTTATCCGGTAATACGCTCAAGACGG
AGGGAGCGAAGGCTGTTGCTGAGGCGCTGTTGCACAATAGCACCTTGCAA
GAGCTTCACCTCGATCATACATCCGTGGGGCAGGCGGGTGAGAGGTTTTT
GGCCTCTGGATTGGAAGGGAATCCGTACCCGAACTTGTGCGTGTTGACGG
GGTTGAGGCTCGGCTATGTCCTGGCGCATTTGGGAGGAGCATACCCGCAG
GCGTTGGAGGCTTTGAGCAACGATCAAAGCCTGGAGTTTTTGCGGATGAG
ACGCCGGGAGCCCGCGGCAGATTATCGGCATTTGGTAGCAACAGCTGCGG
CAACTGTGACCGTTTCTCGGGGCGTCGTATCGTTTCCTCCTCCTCCACTA
CCAGTGCATTCGATGGTGTTCGGACAGAATGGAGTTAGAGAGGGAGGAAG
AGGGGAAATGGGGAAAGCGAGCACTACTCACAGTGGAAGCAACTGTGACG
AAGTAGCCATGATGATGCTGAGCACCCCGCCCTTGCCAAACTTTTATTCC
CGGAGCAGCAATCATCAAGACAGACAGGGGAATCGTTCTCACCACCACCA
CAACCAGGAGCAGCAGCAGCAGCCGCAGCAGCAGCGGCAGCAGTACCACC
ATCAGCCACCACCACATCCCCCCCGCGTCAATTCCCCCTATACCTGCCCC
TATCCTCAGTCCCAAACCCTACCCTATCCACACACCGCTCCCCTTCCTCC
TTCTGTCATACACGGACTTGTGGCCTGCACACATGCCCCTTTCGACCCTG
CTGAACTCTTCTCCTTGCACCAATTCTACTTCTCCCCCCCACCCAATCCT
GTTGGGGCGACCCCAATAAGCAATACATCATCTCCAGAACAGCATTACTA
TCACCATCGTGGGGCTCTGATGGGAGGAGGGAGGGAGAAAGGGGACGCGG
AAGCTGCCGCATTTTATGCGCAGCAGCAGCAACTACAACAACAACAGCAA
TTGTTGGCAGCGAGAGGGGCGGCGGGACAACCAGTGCAGGGGTTTGTGGT
TAATGGAGGAGGAGGGGAAGGAGGAGGGGAGAAGTTAGCAGTTGCTGGGA
ATAATGTCATGATGATGATGAGGGTCGAGAGCGAGGCGCACTTGCCACCG
ACGAAGAGGCAATGTAACAACACGACACGGGTGCGTGTGGGGGTTTACCC
GCGCTTGCAGCAGCAATTGGAGGTCATGTTGAAGGAGAATGGGAGCCAGG
ATGGGAAAGTGTTGGTGTTGTTGAGACAGTTGCGGTTTTTGGAAGAAAGC
GTGGGGGCGGGCGGGGAGCCACCTTACACACCCGAGATGCTCGAAGGTGT
TTTGTTGGATGCCTTGGCGATGGCGGAGGTTGGGTTGCTCCCCGGGGGGG
GAAACGGAGGGGGGGGAGGGCAGAAAGGGCAAAGCAATTTTAGATGA

Coding sequence (CDS) from alignment at chr3:641561..644707-

>NO03G02160.1 ID=NO03G02160.1|Name=NO03G02160.1|organism=Nannochloropsis oceanica|type=CDS|length=3147bp|location=Sequence derived from alignment at chr3:641561..644707- (Nannochloropsis oceanica)
ATGGCAACCACTACCACCACCCCTGCGACATTCTCCCCGCAGCAGCCCCC
ATCACTAGCACCACCAGCAGCAGCACCCCCAACGCCGGTGGCCGCCGCAA
TGGCTGCGTCGCTTGCGAGCTCGTCCTCCTCTTCCGGGGCGGGCCTATCT
CCCGCCCGACACGTGTACTCTTTTCCTCCCTGCGTCGTAGGCAGCGGAAA
CGGCAGTAGTAGCAGAATTGGTGATGCGAGCAGCAACAGTGATAATATGC
GCATGGGTTGCGTTACTCCTTACATCTCCCCCACCACTCGAAACCGGAAT
GGCGAACTCGCCTTGGGCCGCTCGTCGAGCGCACCCTTGCTAGCACCAGG
CGCATCAGCAACAGCAGCTATCACAGAACCAGACGCCAAGACCCTCTCGA
TGAGAGACGAATTGCAGTGCAGTAGCGGTCATTTATCGCGAACGGGACCG
TCGACGGTTGCTGGAGTAGGAGAGGTTCAGGGGAGCAACACTGCCAACAG
CCAGGCGTCAAAGTTAGCGACCACAACTTTCGCCTCCACGACCCGCAACA
CCACCAAAGCCTTGCTTCGAAAACTCGGCATTTTGTCATCGAATCCCTTG
TCATCCGACAAAAGCAGCATGGCTGCCGGAGTAGGAGCAGCAGGAGCAGG
AGCAGGGAAATCCGAGAAACACATACCACGACCACATTACGAGCATCAGT
ATCAGCAGCAACATCAGCAGCAACAGGACCGAGCGCACCATAGCAGCTGT
AACAGATTCCCATCTCCCTCTTCTCCATCATGCTTCATTAGCAGAAATAG
GACAGGGGAGCTGATACCCTCGAAACAAAACAGCAAAAACATAAACGGCA
ACAGCCACCATGGCGGTGTGCCCACCGACCTTGTCCTAGATAACAAGCAC
ATTACCGGCCCTCAGGCAAAAAAACTCTGTACGGCCTTAGGCAGCGACAC
GACCATTGTCAGCCTGAAGGTCGGTTGCAACGAATTAGGAGACGAAGGAG
CAGCAGCTGTGGCCCAAGCGCTGGCGCACCACCCTTCGTTAGTAACACTC
GATTTGGGATTTAATGGAATAGGAGATCGAGGAGCAGAAGCTTTGGGTCG
AAGTCTCTGCTTGAATCGTTGTCTGAAAACGCTATATCTATCTGGGAATT
GTATTGGTGCCGCAGGCGCTCAGGGACTTGGACAGGCTTTACGGCACAAT
GTCAGCTTGGAGGTGCTTCATCTGACAGGGAATGCGATAGGACAAGGGGG
GGCAGCGGCCTTAGCAGAAGGGTTAGTACAAAACCGGTCGCTCCAAAGAC
TTTATCTGGCGGGCAACGCGTTGGGTCCGCGCGGAAGTGCCGAGCTTTTC
CGTGGGTTGGCGCGAAACACGGGTTTGGTGTGTTTGTTTTTGAGTGATAA
TGGAATCGGAGACGAGGGGGCCATGGCGCTGGCAGGGGCGTTGGTGCAGC
ACGGGCGGTTGCAGGTGTTGGAGTTGGGTTTCAACGGATTGACTGCCATA
GGATTGGCTCCTCTCCTTGCTGCCTTGAAAGGTTGCACCTCCCTCCAATT
TCTTCGGTTGGACAACAATGAAGTGGACAATCGAGGCGCGGCGGAAATAG
CTCGTGCGCTGCCGGCACTACCCGGGCTGAGACTTTTGGATGTTGGATTC
AACTCGATTCGAACGGAGGGGATAGCGGCGCTCATGCGGTCTGTTGCAGG
GCATACGGGCCTCCGAGCGCTGACGTTATCCGGTAATACGCTCAAGACGG
AGGGAGCGAAGGCTGTTGCTGAGGCGCTGTTGCACAATAGCACCTTGCAA
GAGCTTCACCTCGATCATACATCCGTGGGGCAGGCGGGTGAGAGGTTTTT
GGCCTCTGGATTGGAAGGGAATCCGTACCCGAACTTGTGCGTGTTGACGG
GGTTGAGGCTCGGCTATGTCCTGGCGCATTTGGGAGGAGCATACCCGCAG
GCGTTGGAGGCTTTGAGCAACGATCAAAGCCTGGAGTTTTTGCGGATGAG
ACGCCGGGAGCCCGCGGCAGATTATCGGCATTTGGTAGCAACAGCTGCGG
CAACTGTGACCGTTTCTCGGGGCGTCGTATCGTTTCCTCCTCCTCCACTA
CCAGTGCATTCGATGGTGTTCGGACAGAATGGAGTTAGAGAGGGAGGAAG
AGGGGAAATGGGGAAAGCGAGCACTACTCACAGTGGAAGCAACTGTGACG
AAGTAGCCATGATGATGCTGAGCACCCCGCCCTTGCCAAACTTTTATTCC
CGGAGCAGCAATCATCAAGACAGACAGGGGAATCGTTCTCACCACCACCA
CAACCAGGAGCAGCAGCAGCAGCCGCAGCAGCAGCGGCAGCAGTACCACC
ATCAGCCACCACCACATCCCCCCCGCGTCAATTCCCCCTATACCTGCCCC
TATCCTCAGTCCCAAACCCTACCCTATCCACACACCGCTCCCCTTCCTCC
TTCTGTCATACACGGACTTGTGGCCTGCACACATGCCCCTTTCGACCCTG
CTGAACTCTTCTCCTTGCACCAATTCTACTTCTCCCCCCCACCCAATCCT
GTTGGGGCGACCCCAATAAGCAATACATCATCTCCAGAACAGCATTACTA
TCACCATCGTGGGGCTCTGATGGGAGGAGGGAGGGAGAAAGGGGACGCGG
AAGCTGCCGCATTTTATGCGCAGCAGCAGCAACTACAACAACAACAGCAA
TTGTTGGCAGCGAGAGGGGCGGCGGGACAACCAGTGCAGGGGTTTGTGGT
TAATGGAGGAGGAGGGGAAGGAGGAGGGGAGAAGTTAGCAGTTGCTGGGA
ATAATGTCATGATGATGATGAGGGTCGAGAGCGAGGCGCACTTGCCACCG
ACGAAGAGGCAATGTAACAACACGACACGGGTGCGTGTGGGGGTTTACCC
GCGCTTGCAGCAGCAATTGGAGGTCATGTTGAAGGAGAATGGGAGCCAGG
ATGGGAAAGTGTTGGTGTTGTTGAGACAGTTGCGGTTTTTGGAAGAAAGC
GTGGGGGCGGGCGGGGAGCCACCTTACACACCCGAGATGCTCGAAGGTGT
TTTGTTGGATGCCTTGGCGATGGCGGAGGTTGGGTTGCTCCCCGGGGGGG
GAAACGGAGGGGGGGGAGGGCAGAAAGGGCAAAGCAATTTTAGATGA

Synonyms

Publications