NO03G01670.1, NO03G01670.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G01670.1
Unique NameNO03G01670.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length7091
Alignment locationchr3:522181..529384 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:522181..529384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO03G01670.1 vs.
Match: EWM29511.1 (growth hormone-regulated tbc protein 1, partial [Nannochloropsis gaditana])

HSP 1 Score: 719.2 bits (1855), Expect = 2.000e-203
Identity = 401/567 (70.72%), Postives = 437/567 (77.07%), Query Frame = 0
Query:  549 GYKNVEALKALVWDGVPADLRDSVYQWLSGAQAKREAVGVGYYSTLAKASEEENLGLGVV-GEEGE--DESWVCVSREREGAGVGGGG----GGGWREGKRHYGVEMGGGAAGLEVGGVKGGMEMDILMPELDAAWGAKVAMDIELDLGRAFADADAAINTAEGRAALRRVLRTYALRNPSVGYCQGMNFIAGLLLLVVSEETAFWSLAHMCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYRHCDGLYLNLELMAGHWLLVYFINIFPPPVALRILEVSMAEGSDVTFAVALAFLRGLEGELLACDDLHELSQLVRRRQAAMYDADVLLHAARVQLRHMRSTLRILRAWHLGDLMKHEDEIEQTSYRRQQQQ--EGGRAGAAGGGGRGGGGAAGGYMPYLGAGAGGGREAVEGSCSGVRTGGGGAGGV-----------VQRNDDRMRRLVRRSVARGLSLVGLSYWVSPHTRRHWDQMAFQVTHRLFLEEGRFRSMRFTPVLVDLMSWWMNWPILMRRTGGGELPAPNPASPPRRPAAGASRHLSPVRAIPLRRHSSSPVK 1096
            G ++   LK LVW G+P DLRD VY+WLSGA  KREA+GV YY TLA ASEEENLGLGV+ GEEGE  +E+WVCV+RERE AGVG GG    GG     +   G   GGG  G    G KGGM +D++MPELDAAWGAKVA DIELDLGRAF D+DAAINT EGRA LRRVLR YALRNPSVGYCQGMNFIAGLLLL VSEETAFW+LAH+CEEVSPLCFSPPLLGTRADMRALGELLKAELPALY HC  LYLNLE+MAGHWLLVYFINIFPPPVALRILE+SMAEGSDVTFAVALAFLRGLE ELLACDDLHELSQLVR RQA MYDAD LLH  RVQLR MRS LRILRAWHLGDLMKHEDE+++   R  QQ        GAAG G +  G  + G       G   GR     + + +R G    G V            Q+N+ +MRRL+RRSV RGLSL+GLSYWVSPHT RHWDQ+AFQVTHRLFLEEGRFRSMRFTPVLVDL+SWWMNWPILMRRTGGG+LPAP P SP RR + G S   SP R    RRHSSSP+K
Sbjct:   22 GVQSPGDLKGLVWQGIPPDLRDPVYEWLSGASCKREALGVNYYHTLAAASEEENLGLGVIGGEEGEEGEEAWVCVTREREDAGVGMGGTGVHGGEGLRWEGGAGSGTGGGYVGRRGAGGKGGMVVDVVMPELDAAWGAKVAQDIELDLGRAFTDSDAAINTPEGRARLRRVLRAYALRNPSVGYCQGMNFIAGLLLLAVSEETAFWTLAHVCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYEHCSALYLNLEMMAGHWLLVYFINIFPPPVALRILEISMAEGSDVTFAVALAFLRGLEAELLACDDLHELSQLVRIRQAGMYDADALLHQTRVQLRRMRSNLRILRAWHLGDLMKHEDEMDRVLCRAPQQARWRWRHRGAAGEGRQDEGNKSKG-------GDAPGRSHAGTTEADMRDGRSMNGWVYGSNESDRENLAQQNEQKMRRLMRRSVTRGLSLIGLSYWVSPHTWRHWDQLAFQVTHRLFLEEGRFRSMRFTPVLVDLVSWWMNWPILMRRTGGGDLPAPAPTSPVRRSSLGPSVAGSPPRVASNRRHSSSPIK 581          
The following BLAST results are available for this feature:
BLAST of NO03G01670.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29511.12.000e-20370.72growth hormone-regulated tbc protein 1, partial [N... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01670NO03G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G01670.1NO03G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G01670.1.cds1NO03G01670.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G01670.1.cds2NO03G01670.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G01670.1 ID=NO03G01670.1|Name=NO03G01670.1|organism=Nannochloropsis oceanica|type=mRNA|length=7091bp
GTGAAGGAGAGTGTCATGTGCCCAATGCATTTGCGTCTGCTCCTACAGGC
AAATTCCTCGTTCCCCCTGTTTTCTAGGCACTACAAAATCTGTGACTTTC
GGCCAAGGAGTTTGGATGCCTGGTGGCCAGCTGGTCATAGTTTTGCTTTC
TTTTCAACTGATGTCTCCCCCCTACTTCGCTTGCTAACCCGCCTCCCCCT
CCCACACAAAAGTAGCACACATCACATCTACAGGCTGCAAAAAAGGTACG
CCCTAGCCATGGGGCGCACGGCCAAGCGAGACCCGTCCTTGACCGTGGAG
ATGCGGGGACTACGGTGTTACAGCCAAGGCATCGAATCTATTCCCAAAAG
TGGGCTGTCACGGCGGCGAGCGTACTACTGGCTATTGACATATGAGGGGC
GGCATCGACGGTCGACTGCATTTCAACTTCCACCTGAAGGCCTATGGCCC
ACTCCGTTGGGCGCCGAGAGTTTTCGTGCCGAATGGGGACTGTTGAGTGA
CAGCGACAATGATAATGACGAGGAAGAGGAGAAGGTGGAGGAGGGTGATG
AGGAAAAGGAGGGTGACTGTAAAGGTGGGATCACGAGTGACGCAGCGAAT
GCAGCGTCCTCGGTTTCAGCACGACGACCCGCCTCGCGACTACCGCCGGA
GCGGCTACCCGGATCGGCAGCAGGGATGCTACAGGTCGATTTATTTGAAA
GCGGACCTGTAGGCCCCGGGCCAGCCAAGAACCGGGGGCAAGGGGCGGAG
GAGGAGGACGAGGAGGAAATGGACAGTTATTCCATTTACGACTTCAATGT
GTCACGGGTGGCGAGTGCGCGAGTGGAGCTTCGGGATGGGAGGGTAGATC
GATGGTATCCATGCACAGCACCGGTGACGGGGGAGGTGATTTCTGGAGTG
TTCATTCATGTGGCGACCTGGGTGGGGGAGACGGTGGCCTTGGTGGAGAA
GGAGGAGGAGGAAAGGGAAGGCGCGAGGGAGAAAGGGGGACAGCAGCGAA
AGAGCGGACAGAGACATATCAGCGTAGAGGGGGATGAAGACGTGGGGGGA
AAGCAAGGCAAGGAAGACGGGGAGAACGAAGGGTTAGAGGATTCTACTTC
CTACGCCAACGCAGAGGCTGGGGTGTCTTCTTTCTCCTCCTCTCCTTCCT
CACAACTCCCCAAAGCCATACCACACTCACCTCGTCCCGTGCTCCGAGAT
CATTTTGGCTTTCCAATCGCCGAGCACGCCGAGACTGAATTTCAGCATTT
ACAGAGCCTGGAAGAGCTACGAGCGATCGAGCAGCGGCTGCGGTGGGATC
GGATCAAATGTTTTCGTCCCTCGGCGCAACGGCGACGACGACACAGCGCG
GCTGCTCATGGTGGGGCTGGAGGAGGGGAAGGAGGGAGCTCTGTGCCTGT
AGTTTCGCCTGCCGAGACGGTAGGAAGGAGGCGAATTACCTCTACATCCA
CCGTATCTTCATCGTCCTTCTCCTCGTCGCCACTGCATCAAAGCGCGCAG
GCTGAGACCACTAACGGGGCGTGGGTCAATGACACTAGCACCGGCAGCAG
CAAGAGCACCAGCAGCAGCACCACCACCACCAGCAGCAGCAGCAGCATTA
GTGATACCACCACAAGCAGCACATATTGTAGCAGCAGCTTCCACAGCAGC
AGTAGTGGTGGCTACAAAAACGTCGAGGCGTTAAAGGCCTTAGTCTGGGA
CGGCGTACCCGCGGATCTTCGTGATTCTGTCTACCAATGGTTGAGCGGCG
CGCAAGCCAAACGAGAGGCAGTCGGTGTCGGTTACTATTCTACCTTGGCC
AAGGCAAGCGAAGAAGAAAATCTGGGTCTGGGGGTGGTCGGAGAGGAGGG
GGAGGATGAATCATGGGTGTGTGTCAGCAGGGAGAGGGAGGGAGCGGGGG
TCGGAGGTGGAGGTGGAGGAGGATGGAGGGAGGGAAAGAGGCATTACGGT
GTAGAAATGGGTGGGGGTGCGGCAGGATTAGAAGTAGGGGGAGTGAAGGG
GGGAATGGAGATGGATATTTTGATGCCGGAGCTGGATGCGGCGTGGGGGG
CGAAAGTGGCAATGGATATAGAGCTTGATTTGGGCCGGGCGTTCGCCGAT
GCCGATGCTGCGATTAATACAGCGGAGGGGAGGGCGGCGTTGCGGAGGGT
GCTGAGGACGTACGCATTAAGGAACCCGTCGGTGGGTTACTGCCAGGGGA
TGAATTTCATCGCTGGCTTGTTGCTGTTGGTGGTGAGTGAGGAGACTGCG
TTTTGGTCCCTGGCGCATATGTGCGAAGAAGTGAGCCCCTTGTGTTTTTC
CCCCCCCTTGCTGGGGACCCGGGCGGACATGCGGGCGTTGGGTGAATTGT
TAAAAGCAGAGCTGCCGGCGTTATATCGGCATTGTGATGGGTTGTATCTG
AATTTAGAGTTGATGGCAGGTCATTGGTTACTGGTGTACTTTATTAATAT
ATTCCCACCGCCTGTGGCGTTGAGGATCTTGGAGGTGAGTATGGCAGAAG
GTTCCGATGTGACATTCGCGGTTGCCTTGGCCTTCTTGAGGGGTTTGGAG
GGGGAGTTATTGGCATGCGATGATCTGCATGAGTTGAGTCAGTTGGTGCG
AAGGAGGCAAGCAGCCATGTATGATGCTGATGTGTTGTTGCACGCTGCTC
GGGTGCAACTGAGGCATATGAGGTCGACGTTACGCATTTTACGGGCGTGG
CACTTGGGGGATTTGATGAAACATGAGGATGAGATTGAGCAGACGTCTTA
TCGACGCCAGCAGCAGCAGGAGGGAGGGCGGGCCGGAGCAGCCGGCGGAG
GAGGGAGAGGAGGCGGAGGAGCGGCAGGAGGATACATGCCTTATCTGGGA
GCGGGGGCGGGTGGTGGTCGAGAGGCAGTGGAAGGAAGCTGTAGTGGGGT
TAGGACTGGAGGAGGTGGCGCGGGAGGAGTTGTACAACGGAATGATGATC
GGATGCGGCGCTTGGTGCGACGGTCTGTGGCAAGGGGGCTGTCGCTGGTG
GGCCTGTCGTACTGGGTGAGCCCGCACACGCGGCGGCATTGGGATCAGAT
GGCGTTTCAAGTCACACATCGCCTCTTTTTGGAAGAGGGTCGATTTCGCT
CCATGCGGTTCACGCCCGTGTTGGTTGACTTGATGTCGTGGTGGATGAAT
TGGCCCATCTTGATGAGACGTACGGGAGGGGGTGAACTACCTGCCCCTAA
CCCTGCCTCCCCTCCGCGCCGCCCAGCCGCTGGAGCGTCGAGGCACTTGA
GCCCTGTCCGCGCCATCCCCCTTCGCCGGCACAGCAGCAGTCCAGTCAAG
TAATGTACGCGAGAAGAAAAATGGAGAGACGAAGAAGCGCAAGAGGTAAA
ATGAGTGAGTGGGAAAAATCGTTTACAGACGGAACGGGAGTGAGCGGGCT
TTAAAATGGATCAAACTAGAAATCTGGTAAACGTGATAGGAGGCATAAAA
AAGGCATTGTATCTTGTTTGTCCGCATATCTGTGTATAAAGGCGCGTAAA
AATAGACGAAGGATAGCCAGCAGAACGAGATGTTTTAACTCAGCCAGCAG
CAACGCAAGCAGACAAAGAACAAGAAGCAGTGTATGTAAATAGCGAACCG
ACACGCCTACTGGGCAGTGATATTGACACGAAACAATCAGGAAACTGTTT
TATATTGCAATGGTTCTATGCGTGCCATCGCTGTCATGTCGAATTCTCGA
TAGTTTGGGGGAAATTAGTCGTCGTCCGTCTTGCTTCCCGAAGCGAATGC
AAGGTGACTTAATTCGACCAACAGTCGGCCATATAAACCAAACAGCTGCT
GCATCGCATGTCATTTATTTGATTTTACTTTTCGCGATAATTGACAATCA
TCTTGAGCTCTGCCGTGGAACGCGGTATCCAGTAGCGGGTCTTGGTGCCC
ATGCCCTTGCTCTTGAGCAGACGGTGGTCCAAAAGCTCATCAAACAGCTG
TCGAAGGTTCCCGTGGCTTCGAGAAATCATCTTATCCGCACATTGCTGCG
CCAAATCTTCAAAGGTAATCCCGCGTTCTGTTGATGCTGTTTCCGCACCC
GCCGCACCATCTACCCTCCCTCCCACACCATTGGTTGCCTCCTCCTTCCG
CCGGCGCTTGTTGGCCGCCGCCGTCTCCACGCGACGATTGGCCTCCTTCA
CCTCCTCCTCTAATTGACGGACAGCGAGGAATTGTAGCAGTTCCAAATGC
CGCTTCGTCACGCATTGCAACAGGTACTTGAGTCCTTCCCCTGCCGGCAG
GTACGATTGGCCCCCGTGTTTCTCGCTGGAATGGGCGGCTAGTTCCGGCA
CATACGGTGCTAGAGTCGTGACATCATGCCATACCCAGCTCATTGCCTCA
AGATGCTGCGCAGAGAAGAGCAATGGCGCATTTAAATGATCGACCGATGT
CACCAAATGCACGCCTGGACGATTGACCAGCTCAATTAAGGCTTCCAGCA
TGCTATGCCCCCCCTTATGCTGCCACATATTTCGACAATCCAAACTATGT
ATCACAAAAAACAACGGCACGTCTGGATCCCCCTGCTGCTGCTGCTGCGC
CGAGCGCAAGGTACAAGATCGTACTGCCGCCTTCTGTCGGCGCTTGCCCT
GATTGGAAGGCAACGACAACCCTCCCCCTCCCCCTCCACCTCCACCTCCC
CCGAAGCTCATCTCCCTTCCCCACAAGGACGAGAACGACAAAGACCCCGC
CACAGATCCCTTCTCTACCTCAGCCCCCGTCCCCCCTACCGCCGCTGTTG
CCCACAACGCCTCCACGCCCGCCCACCCTCCTGCTGTTGCCTCATCCACT
GCAGTCACGGGTCCATGCCCCATTTCTGTAGCCACCTCCAACAATCGGCT
CGCTTTCCCCGCCCTCGGGTCCAACCCGTCCACAACCACCACCGCTCCCT
CTTTCCTCAGGTATTCGGCAAATCTTTCCAAAATTGTCCTCTTAGAACCT
ACCCCATAAAGAAGTAGATTGAAACCTGCCAGCAAATCATCCACCCACGC
AGGAAATGTGGCAACATACCGATCCTCCAACTTCTTCCTTTCATCCGCAT
GGGAAGGCACAAGCGAACAAACGATTGAACGCACCTCCTGAATAGTGGGT
ACATCCAGCCTTCTTACTTGATTTAGTAACGCCATTGGCGGTTCTAGGCC
AATCACACCCCTGCTTTCCCCCCCCGGAAGCTGCTTCTTGAAAAATCGTT
CCGATCCTAGACAGGTCTGCGCGAACGCAGCACCTTCTGAAGCGGAGGCT
GCAGCAGCAGCGGCGGCAGGGGTAGGTCGTTTGCGTTTGGCGACGATGCG
GGTGCGGACGGAAGCTGGGAGAGGAGGAGAAGGAGGGGTTTTGTGTCTTG
CAGGCGCCGGAGGAGGGTGGGCTGCAGCTGGGGTCTTCTCCTTAACCTTG
CCTACGGCCTTGCTCTTGGCAGCGGCAGCAGCTTCCTGGTGGCAGACGAG
ATGCAGTGCCACTTTCTCATCCTGTTCTTCTTTTCCTTCAGCCCCTTCAT
TCTCCTCCTCTTTCTCCAGCTCTTCTTTCTCCACAACTACCAGTTGCGGC
GGCGGTGGTGGCATCTTTCTCTTCATCGCCCCTACGATCTTTTTATAAAA
CGGCCCTGTCCCTAGCGCATGCAAATGGTCCAAAATTAAATCACGCCTCT
CCTTCACCTCCTCATCGGGCACCTCTAACACCTCCCCTTGCCCTTGTCCC
TCCGCTGCCACGTCATCCTTGTTGCTCTTCTTTTGTGGGTGCGTCCGCGG
GTCGAGCAACCACTTCAGGAACGCCAACATGGTATCAAAAAACACAGCTT
CGGCCGCCGTCCGCCCGTACTTGAAGAAGAACTTCTGCCGTTGTCCTATC
CGACGATCGGCCTGGTTCAAAACGCGGTAGAGCTGGCTCCAGGCATTCGA
GACGGTAGTGAAATGAACTTGAAGTTCTTCGTTCGTCGCCACCTCTTCCA
AGGCCAACCCCAGGCTGCTTGGGGTGTGCTCGGACAGGAAGTCGGCTTCG
TATTTCGCGGGGTCAAAAGCGGGAGGAGATGACCGGGAAGCACGATCTAG
TTGTTGCTTCTGTTGGGGCTGCTGCTGCTGCTTCGTGGTCGTGACTACCT
GTGCTTTAGTAGATGCCTTCTTCGTCGGCAGCGGCGGCGGTGGTGGCGGT
AGCGTTGCCACGGCCGCTTCCTTTTTGCGAGCAGCAGTGGGAGCAGAAGC
AGAAGCAGGTGCAGTCTTTGGCTTGGGTTGGGACGCGGCGGGCCGTCGGA
ATCTTCGTGTAGAGGCGGACATAGCTGCTGCTGCTCCTGACTTTGGTGCT
CCCGTCGTCATTGGAGACCGGCCTGCTGCGGGAGCAGATTTTTGTAGTGA
CGGCGGGGGAAACTTGAGTTGTACGGCAGCATGCGTCATATCATTGCTGC
CAGGCTCGTAGAAGAAGGCCAGAAAGTCACGAAAGAGCTCCAAATGCCCT
TGCATGTATTCATACAGACCCCGGAGGTCTAGCGGCTTGCTACTGCCGCC
ACTGCTCCCCGCGCCCCTGTCCTCCTCGCGCGGCACGAGCTTCCCGTGCA
ACTCCCTCCAGCCTTGGTGGGCCAAGAGCCATAGGCGCAGGTTGGCCAGC
TCGCCCCGCACCCGATTTCGCAGAGCATCCGCTTCTCCAGGCGTTATGGG
GGATGGTTGCTGCTTTTCTTCTGCCTGCTCCTCCTCCTCCAGTGGCTGCC
GGGACGGTGGGTCATTTTCACTGACATCGTCATAGTCGTCGTCTTCCCAC
ATCTATCGGGTGCGTGGGTAGGTGAGAGGCTGGGTGGTGGTGTGTTGGAA
GCTGTTGCTCGTGATGCTCGCCCGTTTTTTGTGTTCCTCGTTCGCCTGTC
GGCGATGCTGTGTGGGGCAAGAGAGGGCCGGCAGAGCATACGAATGGCAA
AGGAAATGACGTTAGGGCTGAAGTGGTGCACATTTGAGCGCGATGCGAGG
ATAGTGGGGCTATAGTCACCCAAAAAGGGCCGGAGGAAAGGCAAAAGGTT
GCAAAAGCAAGGTGTCGCCACAGGGTGGTGAGGTTGGGCGTGCGCCAGAA
GCAAGATGGACATGATTTACACACGTGCGATTTGATTTCAT
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protein sequence of NO03G01670.1

>NO03G01670.1-protein ID=NO03G01670.1-protein|Name=NO03G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1096bp
MCPMHLRLLLQANSSFPLFSRHYKICDFRPRSLDAWWPAGHSFAFFSTDV
SPLLRLLTRLPLPHKSSTHHIYRLQKRYALAMGRTAKRDPSLTVEMRGLR
CYSQGIESIPKSGLSRRRAYYWLLTYEGRHRRSTAFQLPPEGLWPTPLGA
ESFRAEWGLLSDSDNDNDEEEEKVEEGDEEKEGDCKGGITSDAANAASSV
SARRPASRLPPERLPGSAAGMLQVDLFESGPVGPGPAKNRGQGAEEEDEE
EMDSYSIYDFNVSRVASARVELRDGRVDRWYPCTAPVTGEVISGVFIHVA
TWVGETVALVEKEEEEREGAREKGGQQRKSGQRHISVEGDEDVGGKQGKE
DGENEGLEDSTSYANAEAGVSSFSSSPSSQLPKAIPHSPRPVLRDHFGFP
IAEHAETEFQHLQSLEELRAIEQRLRWDRIKCFRPSAQRRRRHSAAAHGG
AGGGEGGSSVPVVSPAETVGRRRITSTSTVSSSSFSSSPLHQSAQAETTN
GAWVNDTSTGSSKSTSSSTTTTSSSSSISDTTTSSTYCSSSFHSSSSGGY
KNVEALKALVWDGVPADLRDSVYQWLSGAQAKREAVGVGYYSTLAKASEE
ENLGLGVVGEEGEDESWVCVSREREGAGVGGGGGGGWREGKRHYGVEMGG
GAAGLEVGGVKGGMEMDILMPELDAAWGAKVAMDIELDLGRAFADADAAI
NTAEGRAALRRVLRTYALRNPSVGYCQGMNFIAGLLLLVVSEETAFWSLA
HMCEEVSPLCFSPPLLGTRADMRALGELLKAELPALYRHCDGLYLNLELM
AGHWLLVYFINIFPPPVALRILEVSMAEGSDVTFAVALAFLRGLEGELLA
CDDLHELSQLVRRRQAAMYDADVLLHAARVQLRHMRSTLRILRAWHLGDL
MKHEDEIEQTSYRRQQQQEGGRAGAAGGGGRGGGGAAGGYMPYLGAGAGG
GREAVEGSCSGVRTGGGGAGGVVQRNDDRMRRLVRRSVARGLSLVGLSYW
VSPHTRRHWDQMAFQVTHRLFLEEGRFRSMRFTPVLVDLMSWWMNWPILM
RRTGGGELPAPNPASPPRRPAAGASRHLSPVRAIPLRRHSSSPVK*
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mRNA from alignment at chr3:522181..529384-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G01670.1 ID=NO03G01670.1|Name=NO03G01670.1|organism=Nannochloropsis oceanica|type=mRNA|length=7204bp|location=Sequence derived from alignment at chr3:522181..529384- (Nannochloropsis oceanica)
GTGAAGGAGAGTGTCATGTGCCCAATGCATTTGCGTCTGCTCCTACAGGC AAATTCCTCGTTCCCCCTGTTTTCTAGGCACTACAAAATCTGTGACTTTC GGCCAAGGAGTTTGGATGCCTGGTGGCCAGCTGGTCATAGTTTTGCTTTC TTTTCAACTGATGTCTCCCCCCTACTTCGCTTGCTAACCCGCCTCCCCCT CCCACACAAAAGTAGCACACATCACATCTACAGGCTGCAAAAAAGGTACG CCCTAGCCATGGGGCGCACGGCCAAGCGAGACCCGTCCTTGACCGTGGAG ATGCGGGGACTACGGTGTTACAGCCAAGGTAAAATGCTCTTTGAGAGCTA GTTAGGAAGCCCGCCCCCTGATTTGATGATGGGGCCCGATGACTAATGAT GCAACCAGACCATGTGCACCCCCCAATCACACTCCACACAGGCATCGAAT CTATTCCCAAAAGTGGGCTGTCACGGCGGCGAGCGTACTACTGGCTATTG ACATATGAGGGGCGGCATCGACGGTCGACTGCATTTCAACTTCCACCTGA AGGCCTATGGCCCACTCCGTTGGGCGCCGAGAGTTTTCGTGCCGAATGGG GACTGTTGAGTGACAGCGACAATGATAATGACGAGGAAGAGGAGAAGGTG GAGGAGGGTGATGAGGAAAAGGAGGGTGACTGTAAAGGTGGGATCACGAG TGACGCAGCGAATGCAGCGTCCTCGGTTTCAGCACGACGACCCGCCTCGC GACTACCGCCGGAGCGGCTACCCGGATCGGCAGCAGGGATGCTACAGGTC GATTTATTTGAAAGCGGACCTGTAGGCCCCGGGCCAGCCAAGAACCGGGG GCAAGGGGCGGAGGAGGAGGACGAGGAGGAAATGGACAGTTATTCCATTT ACGACTTCAATGTGTCACGGGTGGCGAGTGCGCGAGTGGAGCTTCGGGAT GGGAGGGTAGATCGATGGTATCCATGCACAGCACCGGTGACGGGGGAGGT GATTTCTGGAGTGTTCATTCATGTGGCGACCTGGGTGGGGGAGACGGTGG CCTTGGTGGAGAAGGAGGAGGAGGAAAGGGAAGGCGCGAGGGAGAAAGGG GGACAGCAGCGAAAGAGCGGACAGAGACATATCAGCGTAGAGGGGGATGA AGACGTGGGGGGAAAGCAAGGCAAGGAAGACGGGGAGAACGAAGGGTTAG AGGATTCTACTTCCTACGCCAACGCAGAGGCTGGGGTGTCTTCTTTCTCC TCCTCTCCTTCCTCACAACTCCCCAAAGCCATACCACACTCACCTCGTCC CGTGCTCCGAGATCATTTTGGCTTTCCAATCGCCGAGCACGCCGAGACTG AATTTCAGCATTTACAGAGCCTGGAAGAGCTACGAGCGATCGAGCAGCGG CTGCGGTGGGATCGGATCAAATGTTTTCGTCCCTCGGCGCAACGGCGACG ACGACACAGCGCGGCTGCTCATGGTGGGGCTGGAGGAGGGGAAGGAGGGA GCTCTGTGCCTGTAGTTTCGCCTGCCGAGACGGTAGGAAGGAGGCGAATT ACCTCTACATCCACCGTATCTTCATCGTCCTTCTCCTCGTCGCCACTGCA TCAAAGCGCGCAGGCTGAGACCACTAACGGGGCGTGGGTCAATGACACTA GCACCGGCAGCAGCAAGAGCACCAGCAGCAGCACCACCACCACCAGCAGC AGCAGCAGCATTAGTGATACCACCACAAGCAGCACATATTGTAGCAGCAG CTTCCACAGCAGCAGTAGTGGTGGCTACAAAAACGTCGAGGCGTTAAAGG CCTTAGTCTGGGACGGCGTACCCGCGGATCTTCGTGATTCTGTCTACCAA TGGTTGAGCGGCGCGCAAGCCAAACGAGAGGCAGTCGGTGTCGGTTACTA TTCTACCTTGGCCAAGGCAAGCGAAGAAGAAAATCTGGGTCTGGGGGTGG TCGGAGAGGAGGGGGAGGATGAATCATGGGTGTGTGTCAGCAGGGAGAGG GAGGGAGCGGGGGTCGGAGGTGGAGGTGGAGGAGGATGGAGGGAGGGAAA GAGGCATTACGGTGTAGAAATGGGTGGGGGTGCGGCAGGATTAGAAGTAG GGGGAGTGAAGGGGGGAATGGAGATGGATATTTTGATGCCGGAGCTGGAT GCGGCGTGGGGGGCGAAAGTGGCAATGGATATAGAGCTTGATTTGGGCCG GGCGTTCGCCGATGCCGATGCTGCGATTAATACAGCGGAGGGGAGGGCGG CGTTGCGGAGGGTGCTGAGGACGTACGCATTAAGGAACCCGTCGGTGGGT TACTGCCAGGGGATGAATTTCATCGCTGGCTTGTTGCTGTTGGTGGTGAG TGAGGAGACTGCGTTTTGGTCCCTGGCGCATATGTGCGAAGAAGTGAGCC CCTTGTGTTTTTCCCCCCCCTTGCTGGGGACCCGGGCGGACATGCGGGCG TTGGGTGAATTGTTAAAAGCAGAGCTGCCGGCGTTATATCGGCATTGTGA TGGGTTGTATCTGAATTTAGAGTTGATGGCAGGTCATTGGTTACTGGTGT ACTTTATTAATATATTCCCACCGCCTGTGGCGTTGAGGATCTTGGAGGTG AGTATGGCAGAAGGTTCCGATGTGACATTCGCGGTTGCCTTGGCCTTCTT GAGGGGTTTGGAGGGGGAGTTATTGGCATGCGATGATCTGCATGAGTTGA GTCAGTTGGTGCGAAGGAGGCAAGCAGCCATGTATGATGCTGATGTGTTG TTGCACGCTGCTCGGGTGCAACTGAGGCATATGAGGTCGACGTTACGCAT TTTACGGGCGTGGCACTTGGGGGATTTGATGAAACATGAGGATGAGATTG AGCAGACGTCTTATCGACGCCAGCAGCAGCAGGAGGGAGGGCGGGCCGGA GCAGCCGGCGGAGGAGGGAGAGGAGGCGGAGGAGCGGCAGGAGGATACAT GCCTTATCTGGGAGCGGGGGCGGGTGGTGGTCGAGAGGCAGTGGAAGGAA GCTGTAGTGGGGTTAGGACTGGAGGAGGTGGCGCGGGAGGAGTTGTACAA CGGAATGATGATCGGATGCGGCGCTTGGTGCGACGGTCTGTGGCAAGGGG GCTGTCGCTGGTGGGCCTGTCGTACTGGGTGAGCCCGCACACGCGGCGGC ATTGGGATCAGATGGCGTTTCAAGTCACACATCGCCTCTTTTTGGAAGAG GGTCGATTTCGCTCCATGCGGTTCACGCCCGTGTTGGTTGACTTGATGTC GTGGTGGATGAATTGGCCCATCTTGATGAGACGTACGGGAGGGGGTGAAC TACCTGCCCCTAACCCTGCCTCCCCTCCGCGCCGCCCAGCCGCTGGAGCG TCGAGGCACTTGAGCCCTGTCCGCGCCATCCCCCTTCGCCGGCACAGCAG CAGTCCAGTCAAGTAATGTACGCGAGAAGAAAAATGGAGAGACGAAGAAG CGCAAGAGGTAAAATGAGTGAGTGGGAAAAATCGTTTACAGACGGAACGG GAGTGAGCGGGCTTTAAAATGGATCAAACTAGAAATCTGGTAAACGTGAT AGGAGGCATAAAAAAGGCATTGTATCTTGTTTGTCCGCATATCTGTGTAT AAAGGCGCGTAAAAATAGACGAAGGATAGCCAGCAGAACGAGATGTTTTA ACTCAGCCAGCAGCAACGCAAGCAGACAAAGAACAAGAAGCAGTGTATGT AAATAGCGAACCGACACGCCTACTGGGCAGTGATATTGACACGAAACAAT CAGGAAACTGTTTTATATTGCAATGGTTCTATGCGTGCCATCGCTGTCAT GTCGAATTCTCGATAGTTTGGGGGAAATTAGTCGTCGTCCGTCTTGCTTC CCGAAGCGAATGCAAGGTGACTTAATTCGACCAACAGTCGGCCATATAAA CCAAACAGCTGCTGCATCGCATGTCATTTATTTGATTTTACTTTTCGCGA TAATTGACAATCATCTTGAGCTCTGCCGTGGAACGCGGTATCCAGTAGCG GGTCTTGGTGCCCATGCCCTTGCTCTTGAGCAGACGGTGGTCCAAAAGCT CATCAAACAGCTGTCGAAGGTTCCCGTGGCTTCGAGAAATCATCTTATCC GCACATTGCTGCGCCAAATCTTCAAAGGTAATCCCGCGTTCTGTTGATGC TGTTTCCGCACCCGCCGCACCATCTACCCTCCCTCCCACACCATTGGTTG CCTCCTCCTTCCGCCGGCGCTTGTTGGCCGCCGCCGTCTCCACGCGACGA TTGGCCTCCTTCACCTCCTCCTCTAATTGACGGACAGCGAGGAATTGTAG CAGTTCCAAATGCCGCTTCGTCACGCATTGCAACAGGTACTTGAGTCCTT CCCCTGCCGGCAGGTACGATTGGCCCCCGTGTTTCTCGCTGGAATGGGCG GCTAGTTCCGGCACATACGGTGCTAGAGTCGTGACATCATGCCATACCCA GCTCATTGCCTCAAGATGCTGCGCAGAGAAGAGCAATGGCGCATTTAAAT GATCGACCGATGTCACCAAATGCACGCCTGGACGATTGACCAGCTCAATT AAGGCTTCCAGCATGCTATGCCCCCCCTTATGCTGCCACATATTTCGACA ATCCAAACTATGTATCACAAAAAACAACGGCACGTCTGGATCCCCCTGCT GCTGCTGCTGCGCCGAGCGCAAGGTACAAGATCGTACTGCCGCCTTCTGT CGGCGCTTGCCCTGATTGGAAGGCAACGACAACCCTCCCCCTCCCCCTCC ACCTCCACCTCCCCCGAAGCTCATCTCCCTTCCCCACAAGGACGAGAACG ACAAAGACCCCGCCACAGATCCCTTCTCTACCTCAGCCCCCGTCCCCCCT ACCGCCGCTGTTGCCCACAACGCCTCCACGCCCGCCCACCCTCCTGCTGT TGCCTCATCCACTGCAGTCACGGGTCCATGCCCCATTTCTGTAGCCACCT CCAACAATCGGCTCGCTTTCCCCGCCCTCGGGTCCAACCCGTCCACAACC ACCACCGCTCCCTCTTTCCTCAGGTATTCGGCAAATCTTTCCAAAATTGT CCTCTTAGAACCTACCCCATAAAGAAGTAGATTGAAACCTGCCAGCAAAT CATCCACCCACGCAGGAAATGTGGCAACATACCGATCCTCCAACTTCTTC CTTTCATCCGCATGGGAAGGCACAAGCGAACAAACGATTGAACGCACCTC CTGAATAGTGGGTACATCCAGCCTTCTTACTTGATTTAGTAACGCCATTG GCGGTTCTAGGCCAATCACACCCCTGCTTTCCCCCCCCGGAAGCTGCTTC TTGAAAAATCGTTCCGATCCTAGACAGGTCTGCGCGAACGCAGCACCTTC TGAAGCGGAGGCTGCAGCAGCAGCGGCGGCAGGGGTAGGTCGTTTGCGTT TGGCGACGATGCGGGTGCGGACGGAAGCTGGGAGAGGAGGAGAAGGAGGG GTTTTGTGTCTTGCAGGCGCCGGAGGAGGGTGGGCTGCAGCTGGGGTCTT CTCCTTAACCTTGCCTACGGCCTTGCTCTTGGCAGCGGCAGCAGCTTCCT GGTGGCAGACGAGATGCAGTGCCACTTTCTCATCCTGTTCTTCTTTTCCT TCAGCCCCTTCATTCTCCTCCTCTTTCTCCAGCTCTTCTTTCTCCACAAC TACCAGTTGCGGCGGCGGTGGTGGCATCTTTCTCTTCATCGCCCCTACGA TCTTTTTATAAAACGGCCCTGTCCCTAGCGCATGCAAATGGTCCAAAATT AAATCACGCCTCTCCTTCACCTCCTCATCGGGCACCTCTAACACCTCCCC TTGCCCTTGTCCCTCCGCTGCCACGTCATCCTTGTTGCTCTTCTTTTGTG GGTGCGTCCGCGGGTCGAGCAACCACTTCAGGAACGCCAACATGGTATCA AAAAACACAGCTTCGGCCGCCGTCCGCCCGTACTTGAAGAAGAACTTCTG CCGTTGTCCTATCCGACGATCGGCCTGGTTCAAAACGCGGTAGAGCTGGC TCCAGGCATTCGAGACGGTAGTGAAATGAACTTGAAGTTCTTCGTTCGTC GCCACCTCTTCCAAGGCCAACCCCAGGCTGCTTGGGGTGTGCTCGGACAG GAAGTCGGCTTCGTATTTCGCGGGGTCAAAAGCGGGAGGAGATGACCGGG AAGCACGATCTAGTTGTTGCTTCTGTTGGGGCTGCTGCTGCTGCTTCGTG GTCGTGACTACCTGTGCTTTAGTAGATGCCTTCTTCGTCGGCAGCGGCGG CGGTGGTGGCGGTAGCGTTGCCACGGCCGCTTCCTTTTTGCGAGCAGCAG TGGGAGCAGAAGCAGAAGCAGGTGCAGTCTTTGGCTTGGGTTGGGACGCG GCGGGCCGTCGGAATCTTCGTGTAGAGGCGGACATAGCTGCTGCTGCTCC TGACTTTGGTGCTCCCGTCGTCATTGGAGACCGGCCTGCTGCGGGAGCAG ATTTTTGTAGTGACGGCGGGGGAAACTTGAGTTGTACGGCAGCATGCGTC ATATCATTGCTGCCAGGCTCGTAGAAGAAGGCCAGAAAGTCACGAAAGAG CTCCAAATGCCCTTGCATGTATTCATACAGACCCCGGAGGTCTAGCGGCT TGCTACTGCCGCCACTGCTCCCCGCGCCCCTGTCCTCCTCGCGCGGCACG AGCTTCCCGTGCAACTCCCTCCAGCCTTGGTGGGCCAAGAGCCATAGGCG CAGGTTGGCCAGCTCGCCCCGCACCCGATTTCGCAGAGCATCCGCTTCTC CAGGCGTTATGGGGGATGGTTGCTGCTTTTCTTCTGCCTGCTCCTCCTCC TCCAGTGGCTGCCGGGACGGTGGGTCATTTTCACTGACATCGTCATAGTC GTCGTCTTCCCACATCTATCGGGTGCGTGGGTAGGTGAGAGGCTGGGTGG TGGTGTGTTGGAAGCTGTTGCTCGTGATGCTCGCCCGTTTTTTGTGTTCC TCGTTCGCCTGTCGGCGATGCTGTGTGGGGCAAGAGAGGGCCGGCAGAGC ATACGAATGGCAAAGGAAATGACGTTAGGGCTGAAGTGGTGCACATTTGA GCGCGATGCGAGGATAGTGGGGCTATAGTCACCCAAAAAGGGCCGGAGGA AAGGCAAAAGGTTGCAAAAGCAAGGTGTCGCCACAGGGTGGTGAGGTTGG GCGTGCGCCAGAAGCAAGATGGACATGATTTACACACGTGCGATTTGATT TCAT
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Coding sequence (CDS) from alignment at chr3:522181..529384-

>NO03G01670.1 ID=NO03G01670.1|Name=NO03G01670.1|organism=Nannochloropsis oceanica|type=CDS|length=3288bp|location=Sequence derived from alignment at chr3:522181..529384- (Nannochloropsis oceanica)
ATGTGCCCAATGCATTTGCGTCTGCTCCTACAGGCAAATTCCTCGTTCCC
CCTGTTTTCTAGGCACTACAAAATCTGTGACTTTCGGCCAAGGAGTTTGG
ATGCCTGGTGGCCAGCTGGTCATAGTTTTGCTTTCTTTTCAACTGATGTC
TCCCCCCTACTTCGCTTGCTAACCCGCCTCCCCCTCCCACACAAAAGTAG
CACACATCACATCTACAGGCTGCAAAAAAGGTACGCCCTAGCCATGGGGC
GCACGGCCAAGCGAGACCCGTCCTTGACCGTGGAGATGCGGGGACTACGG
TGTTACAGCCAAGGCATCGAATCTATTCCCAAAAGTGGGCTGTCACGGCG
GCGAGCGTACTACTGGCTATTGACATATGAGGGGCGGCATCGACGGTCGA
CTGCATTTCAACTTCCACCTGAAGGCCTATGGCCCACTCCGTTGGGCGCC
GAGAGTTTTCGTGCCGAATGGGGACTGTTGAGTGACAGCGACAATGATAA
TGACGAGGAAGAGGAGAAGGTGGAGGAGGGTGATGAGGAAAAGGAGGGTG
ACTGTAAAGGTGGGATCACGAGTGACGCAGCGAATGCAGCGTCCTCGGTT
TCAGCACGACGACCCGCCTCGCGACTACCGCCGGAGCGGCTACCCGGATC
GGCAGCAGGGATGCTACAGGTCGATTTATTTGAAAGCGGACCTGTAGGCC
CCGGGCCAGCCAAGAACCGGGGGCAAGGGGCGGAGGAGGAGGACGAGGAG
GAAATGGACAGTTATTCCATTTACGACTTCAATGTGTCACGGGTGGCGAG
TGCGCGAGTGGAGCTTCGGGATGGGAGGGTAGATCGATGGTATCCATGCA
CAGCACCGGTGACGGGGGAGGTGATTTCTGGAGTGTTCATTCATGTGGCG
ACCTGGGTGGGGGAGACGGTGGCCTTGGTGGAGAAGGAGGAGGAGGAAAG
GGAAGGCGCGAGGGAGAAAGGGGGACAGCAGCGAAAGAGCGGACAGAGAC
ATATCAGCGTAGAGGGGGATGAAGACGTGGGGGGAAAGCAAGGCAAGGAA
GACGGGGAGAACGAAGGGTTAGAGGATTCTACTTCCTACGCCAACGCAGA
GGCTGGGGTGTCTTCTTTCTCCTCCTCTCCTTCCTCACAACTCCCCAAAG
CCATACCACACTCACCTCGTCCCGTGCTCCGAGATCATTTTGGCTTTCCA
ATCGCCGAGCACGCCGAGACTGAATTTCAGCATTTACAGAGCCTGGAAGA
GCTACGAGCGATCGAGCAGCGGCTGCGGTGGGATCGGATCAAATGTTTTC
GTCCCTCGGCGCAACGGCGACGACGACACAGCGCGGCTGCTCATGGTGGG
GCTGGAGGAGGGGAAGGAGGGAGCTCTGTGCCTGTAGTTTCGCCTGCCGA
GACGGTAGGAAGGAGGCGAATTACCTCTACATCCACCGTATCTTCATCGT
CCTTCTCCTCGTCGCCACTGCATCAAAGCGCGCAGGCTGAGACCACTAAC
GGGGCGTGGGTCAATGACACTAGCACCGGCAGCAGCAAGAGCACCAGCAG
CAGCACCACCACCACCAGCAGCAGCAGCAGCATTAGTGATACCACCACAA
GCAGCACATATTGTAGCAGCAGCTTCCACAGCAGCAGTAGTGGTGGCTAC
AAAAACGTCGAGGCGTTAAAGGCCTTAGTCTGGGACGGCGTACCCGCGGA
TCTTCGTGATTCTGTCTACCAATGGTTGAGCGGCGCGCAAGCCAAACGAG
AGGCAGTCGGTGTCGGTTACTATTCTACCTTGGCCAAGGCAAGCGAAGAA
GAAAATCTGGGTCTGGGGGTGGTCGGAGAGGAGGGGGAGGATGAATCATG
GGTGTGTGTCAGCAGGGAGAGGGAGGGAGCGGGGGTCGGAGGTGGAGGTG
GAGGAGGATGGAGGGAGGGAAAGAGGCATTACGGTGTAGAAATGGGTGGG
GGTGCGGCAGGATTAGAAGTAGGGGGAGTGAAGGGGGGAATGGAGATGGA
TATTTTGATGCCGGAGCTGGATGCGGCGTGGGGGGCGAAAGTGGCAATGG
ATATAGAGCTTGATTTGGGCCGGGCGTTCGCCGATGCCGATGCTGCGATT
AATACAGCGGAGGGGAGGGCGGCGTTGCGGAGGGTGCTGAGGACGTACGC
ATTAAGGAACCCGTCGGTGGGTTACTGCCAGGGGATGAATTTCATCGCTG
GCTTGTTGCTGTTGGTGGTGAGTGAGGAGACTGCGTTTTGGTCCCTGGCG
CATATGTGCGAAGAAGTGAGCCCCTTGTGTTTTTCCCCCCCCTTGCTGGG
GACCCGGGCGGACATGCGGGCGTTGGGTGAATTGTTAAAAGCAGAGCTGC
CGGCGTTATATCGGCATTGTGATGGGTTGTATCTGAATTTAGAGTTGATG
GCAGGTCATTGGTTACTGGTGTACTTTATTAATATATTCCCACCGCCTGT
GGCGTTGAGGATCTTGGAGGTGAGTATGGCAGAAGGTTCCGATGTGACAT
TCGCGGTTGCCTTGGCCTTCTTGAGGGGTTTGGAGGGGGAGTTATTGGCA
TGCGATGATCTGCATGAGTTGAGTCAGTTGGTGCGAAGGAGGCAAGCAGC
CATGTATGATGCTGATGTGTTGTTGCACGCTGCTCGGGTGCAACTGAGGC
ATATGAGGTCGACGTTACGCATTTTACGGGCGTGGCACTTGGGGGATTTG
ATGAAACATGAGGATGAGATTGAGCAGACGTCTTATCGACGCCAGCAGCA
GCAGGAGGGAGGGCGGGCCGGAGCAGCCGGCGGAGGAGGGAGAGGAGGCG
GAGGAGCGGCAGGAGGATACATGCCTTATCTGGGAGCGGGGGCGGGTGGT
GGTCGAGAGGCAGTGGAAGGAAGCTGTAGTGGGGTTAGGACTGGAGGAGG
TGGCGCGGGAGGAGTTGTACAACGGAATGATGATCGGATGCGGCGCTTGG
TGCGACGGTCTGTGGCAAGGGGGCTGTCGCTGGTGGGCCTGTCGTACTGG
GTGAGCCCGCACACGCGGCGGCATTGGGATCAGATGGCGTTTCAAGTCAC
ACATCGCCTCTTTTTGGAAGAGGGTCGATTTCGCTCCATGCGGTTCACGC
CCGTGTTGGTTGACTTGATGTCGTGGTGGATGAATTGGCCCATCTTGATG
AGACGTACGGGAGGGGGTGAACTACCTGCCCCTAACCCTGCCTCCCCTCC
GCGCCGCCCAGCCGCTGGAGCGTCGAGGCACTTGAGCCCTGTCCGCGCCA
TCCCCCTTCGCCGGCACAGCAGCAGTCCAGTCAAGTAA
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Synonyms
Publications