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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr3 | genome | chr3:370405..372831 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO03G01200.1 vs.
Match: EWM29535.1 (alcohol acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 851.3 bits (2198), Expect = 2.100e-243 Identity = 426/554 (76.90%), Postives = 471/554 (85.02%), Query Frame = 0
Query: 19 DDGHEWHDAREGDFPPLPSWSLSLPDPQQELRRRKT--ASTTTVAEQQTTIELSSVSASTSSSTASTPPPPPAVEKRWPIESRRPLGGFETFFHTTVPYGLGCIYYVIDFEGPPDTDLLAEAMSFQVKEHPNLRSRLLNGYLEVIPFSACPQIVIPYIESEDVVGHTERWMKEATVLKAGREPYLWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLMTGMASLSPLSPHERERKLEQVKALPQLPSADVQLYPRYNGYYLIYHFRGLFKELWKVFLRPRIPRPCKMTLTEKDRTTRMFSFVLDAPDFKRLLKTCKMQQTTVTGALVAATTQAMEGFIEPEPNPFKLKVEILVNFRGKASATKGSVESHMLYATPMDVMLEAGNTPETSLDFWNTARIAKQEIDAFATEPHRIVDALEFFYVMGHHPIAFPLIRLFGISPKQGRQKAISISNLGMTDKLFQPAGPWRLGRMQMGIDELLFGHSVFLAMASHEGRLNFTLSYIDPIVSRSMAEDYAQAVIRSLIEACPPLVGDVPPTPQTPVSITAKPAS 571
+DGHEWHDARE +F +PSW+LS P P ELR+RK AS +V T E SS +S SS S+P AV++ W IE+RR LGGFETFF TTVPYGLGCIYY++DFEGPPDTDLLAEAM FQVK+HPNLRSRL YLE + F CPQIV+PYIESEDVVG+TER MK A LKAGR+PYLWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLM GMASLSPLSPHERERKL QVKALPQL SAD QLYP+YNGYYL+YHFR LF+ELW+V LRPR+PRPC+MTLTE R TR SFVLDAPDFKRLLKTCK QT+VTGALVAAT+QAMEGFIE P+ FK+KVE+LVNFRGKASAT GS +SH LYA PMD++L AGN ET L+FW TAR AK+EIDAFATEPHRIVDALEFFY+MGHHPIA PLIRLFG SP+QGRQKA+SISNLG TDKLFQPAGPWRLGRMQMGIDELLFGHSVFLAMASHEGRLNF+LSYI+PIVS++MAE+Y+QAVIR+LI+ACPP D PPTPQTPVS K S
Sbjct: 8 EDGHEWHDAREEEFATVPSWALSSPHPLNELRQRKNPDASDKSVPLPPATPETSSTWSSWLSS--SSPTQSSAVKRDWSIEARRRLGGFETFFRTTVPYGLGCIYYIVDFEGPPDTDLLAEAMRFQVKQHPNLRSRLHGDYLEAVAFEDCPQIVVPYIESEDVVGYTERAMKAAKELKAGRDPYLWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLMEGMASLSPLSPHERERKLAQVKALPQLASADEQLYPQYNGYYLVYHFRTLFRELWRVVLRPRLPRPCQMTLTEAPRVTRCLSFVLDAPDFKRLLKTCKANQTSVTGALVAATSQAMEGFIEGPPSSFKMKVEVLVNFRGKASATLGSKDSHQLYAAPMDMLLPAGNKAETRLEFWRTAREAKREIDAFATEPHRIVDALEFFYIMGHHPIAMPLIRLFGASPRQGRQKALSISNLGSTDKLFQPAGPWRLGRMQMGIDELLFGHSVFLAMASHEGRLNFSLSYIEPIVSKAMAENYSQAVIRALIDACPPASEDAPPTPQTPVSRILKSKS 559
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G01200.1 ID=NO03G01200.1|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2427bp ACAGGGCCAACCATGTCCAGCCCTACCCCTACACTCGCGCCTGCCCCTGC CTCCAAAGCGCAAGCGGACGACGGGCACGAGTGGCATGACGCCCGGGAAG GGGACTTCCCGCCGCTTCCATCTTGGTCTTTATCCCTCCCCGACCCACAA CAAGAGCTTCGTCGACGTAAAACTGCTTCGACCACTACCGTCGCTGAGCA ACAGACCACTATTGAGTTGTCGTCCGTCTCGGCTTCCACCAGCTCTAGCA CCGCTTCCACGCCTCCCCCTCCTCCAGCCGTGGAAAAGCGGTGGCCTATC GAGTCCCGACGGCCCCTGGGTGGGTTTGAAACATTCTTCCATACCACGGT GCCCTACGGACTCGGCTGCATCTACTATGTCATTGACTTTGAAGGACCTC CCGACACGGACCTGCTGGCCGAAGCCATGAGTTTCCAAGTCAAGGAGCAT CCCAACCTCCGTTCTCGCCTCCTCAATGGCTATTTGGAAGTCATTCCTTT TAGTGCGTGTCCACAGATTGTTATCCCTTACATCGAATCAGAAGACGTGG TGGGGCACACGGAACGATGGATGAAGGAAGCAACAGTCCTCAAGGCCGGC CGTGAGCCCTACCTGTGGCAGCTGGCCCTGCACCATACACCCTCCTCCGA GTCGCACCACCTCCTCTTTCTTATCCATCACGCCATTTCCGACGGTGATT CCATCCTGCGCTGCCTTCAGTCCCTGATGACCGGCATGGCCTCCCTGTCC CCCCTGTCCCCCCATGAGCGCGAGCGAAAATTGGAGCAAGTCAAGGCCTT GCCGCAGCTCCCCAGCGCTGACGTCCAGTTGTACCCGCGCTACAATGGCT ACTACCTCATTTACCACTTTCGGGGCTTGTTCAAAGAGCTCTGGAAAGTC TTCCTCCGCCCTCGCATTCCTCGGCCATGCAAAATGACGCTTACGGAAAA GGACCGGACTACTCGCATGTTCTCCTTCGTCCTGGACGCACCCGACTTCA AGCGGCTGCTCAAAACGTGCAAGATGCAGCAAACTACCGTGACAGGCGCC TTGGTCGCAGCCACCACGCAGGCGATGGAAGGGTTCATTGAACCGGAGCC GAACCCGTTCAAGTTGAAGGTGGAGATTTTGGTCAATTTCCGCGGCAAGG CGAGTGCTACCAAGGGGTCAGTTGAGTCCCATATGCTCTATGCGACTCCC ATGGACGTGATGCTCGAGGCGGGTAACACCCCGGAGACGAGTCTGGATTT CTGGAACACGGCTCGGATTGCCAAGCAAGAAATTGACGCATTTGCTACGG AGCCGCACCGCATTGTGGATGCCTTAGAGTTCTTCTACGTGATGGGACAT CACCCTATCGCCTTCCCCCTGATTCGACTGTTTGGCATTTCTCCCAAGCA GGGACGACAGAAGGCTATTTCTATCTCCAATTTAGGAATGACGGATAAGC TCTTTCAGCCCGCGGGGCCCTGGAGGCTAGGGCGTATGCAGATGGGGATC GATGAGCTCTTGTTTGGACACAGTGTCTTCCTAGCCATGGCGTCCCATGA AGGACGTTTGAATTTCACTCTATCTTATATTGATCCGATTGTTTCGCGGT CCATGGCGGAGGACTATGCGCAGGCTGTCATCCGCTCATTGATTGAAGCT TGCCCCCCGTTGGTGGGGGACGTGCCACCTACGCCGCAGACGCCTGTGTC GATTACAGCCAAGCCTGCTTCTTCCTCTCACTCTACGGCAATCAATTTGC TGAGCCAAGAGCCGCGGGGAGGGGGATTGGTCAGTGGTGCGGGCGGGGCG GGTAGACTTGGAGCTGTTGGGGCTTCGGGCCCTGGGTCTACGAGCGCAGG TGGCTCGCCTCGGGCAGCAACAGGAGCAGGAGCAGGAGGAGCAGGAGCAG GAGCAGGAGGGTCAGTAGTGACCAGTGGAAGGGCAGGCGAGATGGGAGTC GTGAGCCCGGCGGCGGGAGGAGGGTCTAGCGCGTTGTCCTCCTCATCGGG TGCCAGGCCCAAGGTGCCGCGGATGGTGGCAGGCTCTTAAAGCCAAAAAA GACTTATAGATTATGGTTGGAGGGAGAGGGGGAAAAAGAGAAGAGGATAA TCGAATGCGTAGGTCTTAACATTCGAGCATTACTTAATATACTTTAGTAC CACCTTTATATGCGATACATGTACGTGGTATGGGGCTGCACTTTCCTGTC AGCTGTCGGAGAAACGGCGGATGCACACACCTTCCCATCTCCACCCGGAA AAGGGCGGGGGAGAGTGTCCTTTATTATAGCTATCACGATTTGTAAAGTG AGGATAATTACGTGACAGCCGCATACTAGAAATCAATATTAAAACAAGCT AGGCAGGGAGATACAGAGCTCTAGATGGTAAGAGAACAAATATACAACAA ATTATACTGACATAGTTTTTGATGCCA back to topprotein sequence of NO03G01200.1 >NO03G01200.1-protein ID=NO03G01200.1-protein|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=676bp MSSPTPTLAPAPASKAQADDGHEWHDAREGDFPPLPSWSLSLPDPQQELR RRKTASTTTVAEQQTTIELSSVSASTSSSTASTPPPPPAVEKRWPIESRR PLGGFETFFHTTVPYGLGCIYYVIDFEGPPDTDLLAEAMSFQVKEHPNLR SRLLNGYLEVIPFSACPQIVIPYIESEDVVGHTERWMKEATVLKAGREPY LWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLMTGMASLSPLSP HERERKLEQVKALPQLPSADVQLYPRYNGYYLIYHFRGLFKELWKVFLRP RIPRPCKMTLTEKDRTTRMFSFVLDAPDFKRLLKTCKMQQTTVTGALVAA TTQAMEGFIEPEPNPFKLKVEILVNFRGKASATKGSVESHMLYATPMDVM LEAGNTPETSLDFWNTARIAKQEIDAFATEPHRIVDALEFFYVMGHHPIA FPLIRLFGISPKQGRQKAISISNLGMTDKLFQPAGPWRLGRMQMGIDELL FGHSVFLAMASHEGRLNFTLSYIDPIVSRSMAEDYAQAVIRSLIEACPPL VGDVPPTPQTPVSITAKPASSSHSTAINLLSQEPRGGGLVSGAGGAGRLG AVGASGPGSTSAGGSPRAATGAGAGGAGAGAGGSVVTSGRAGEMGVVSPA AGGGSSALSSSSGARPKVPRMVAGS* back to topmRNA from alignment at chr3:370405..372831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G01200.1 ID=NO03G01200.1|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2427bp|location=Sequence derived from alignment at chr3:370405..372831- (Nannochloropsis oceanica) ACAGGGCCAACCATGTCCAGCCCTACCCCTACACTCGCGCCTGCCCCTGC
CTCCAAAGCGCAAGCGGACGACGGGCACGAGTGGCATGACGCCCGGGAAG
GGGACTTCCCGCCGCTTCCATCTTGGTCTTTATCCCTCCCCGACCCACAA
CAAGAGCTTCGTCGACGTAAAACTGCTTCGACCACTACCGTCGCTGAGCA
ACAGACCACTATTGAGTTGTCGTCCGTCTCGGCTTCCACCAGCTCTAGCA
CCGCTTCCACGCCTCCCCCTCCTCCAGCCGTGGAAAAGCGGTGGCCTATC
GAGTCCCGACGGCCCCTGGGTGGGTTTGAAACATTCTTCCATACCACGGT
GCCCTACGGACTCGGCTGCATCTACTATGTCATTGACTTTGAAGGACCTC
CCGACACGGACCTGCTGGCCGAAGCCATGAGTTTCCAAGTCAAGGAGCAT
CCCAACCTCCGTTCTCGCCTCCTCAATGGCTATTTGGAAGTCATTCCTTT
TAGTGCGTGTCCACAGATTGTTATCCCTTACATCGAATCAGAAGACGTGG
TGGGGCACACGGAACGATGGATGAAGGAAGCAACAGTCCTCAAGGCCGGC
CGTGAGCCCTACCTGTGGCAGCTGGCCCTGCACCATACACCCTCCTCCGA
GTCGCACCACCTCCTCTTTCTTATCCATCACGCCATTTCCGACGGTGATT
CCATCCTGCGCTGCCTTCAGTCCCTGATGACCGGCATGGCCTCCCTGTCC
CCCCTGTCCCCCCATGAGCGCGAGCGAAAATTGGAGCAAGTCAAGGCCTT
GCCGCAGCTCCCCAGCGCTGACGTCCAGTTGTACCCGCGCTACAATGGCT
ACTACCTCATTTACCACTTTCGGGGCTTGTTCAAAGAGCTCTGGAAAGTC
TTCCTCCGCCCTCGCATTCCTCGGCCATGCAAAATGACGCTTACGGAAAA
GGACCGGACTACTCGCATGTTCTCCTTCGTCCTGGACGCACCCGACTTCA
AGCGGCTGCTCAAAACGTGCAAGATGCAGCAAACTACCGTGACAGGCGCC
TTGGTCGCAGCCACCACGCAGGCGATGGAAGGGTTCATTGAACCGGAGCC
GAACCCGTTCAAGTTGAAGGTGGAGATTTTGGTCAATTTCCGCGGCAAGG
CGAGTGCTACCAAGGGGTCAGTTGAGTCCCATATGCTCTATGCGACTCCC
ATGGACGTGATGCTCGAGGCGGGTAACACCCCGGAGACGAGTCTGGATTT
CTGGAACACGGCTCGGATTGCCAAGCAAGAAATTGACGCATTTGCTACGG
AGCCGCACCGCATTGTGGATGCCTTAGAGTTCTTCTACGTGATGGGACAT
CACCCTATCGCCTTCCCCCTGATTCGACTGTTTGGCATTTCTCCCAAGCA
GGGACGACAGAAGGCTATTTCTATCTCCAATTTAGGAATGACGGATAAGC
TCTTTCAGCCCGCGGGGCCCTGGAGGCTAGGGCGTATGCAGATGGGGATC
GATGAGCTCTTGTTTGGACACAGTGTCTTCCTAGCCATGGCGTCCCATGA
AGGACGTTTGAATTTCACTCTATCTTATATTGATCCGATTGTTTCGCGGT
CCATGGCGGAGGACTATGCGCAGGCTGTCATCCGCTCATTGATTGAAGCT
TGCCCCCCGTTGGTGGGGGACGTGCCACCTACGCCGCAGACGCCTGTGTC
GATTACAGCCAAGCCTGCTTCTTCCTCTCACTCTACGGCAATCAATTTGC
TGAGCCAAGAGCCGCGGGGAGGGGGATTGGTCAGTGGTGCGGGCGGGGCG
GGTAGACTTGGAGCTGTTGGGGCTTCGGGCCCTGGGTCTACGAGCGCAGG
TGGCTCGCCTCGGGCAGCAACAGGAGCAGGAGCAGGAGGAGCAGGAGCAG
GAGCAGGAGGGTCAGTAGTGACCAGTGGAAGGGCAGGCGAGATGGGAGTC
GTGAGCCCGGCGGCGGGAGGAGGGTCTAGCGCGTTGTCCTCCTCATCGGG
TGCCAGGCCCAAGGTGCCGCGGATGGTGGCAGGCTCTTAAAGCCAAAAAA
GACTTATAGATTATGGTTGGAGGGAGAGGGGGAAAAAGAGAAGAGGATAA
TCGAATGCGTAGGTCTTAACATTCGAGCATTACTTAATATACTTTAGTAC
CACCTTTATATGCGATACATGTACGTGGTATGGGGCTGCACTTTCCTGTC
AGCTGTCGGAGAAACGGCGGATGCACACACCTTCCCATCTCCACCCGGAA
AAGGGCGGGGGAGAGTGTCCTTTATTATAGCTATCACGATTTGTAAAGTG
AGGATAATTACGTGACAGCCGCATACTAGAAATCAATATTAAAACAAGCT
AGGCAGGGAGATACAGAGCTCTAGATGGTAAGAGAACAAATATACAACAA
ATTATACTGACATAGTTTTTGATGCCA back to topCoding sequence (CDS) from alignment at chr3:370405..372831- >NO03G01200.1 ID=NO03G01200.1|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=CDS|length=2028bp|location=Sequence derived from alignment at chr3:370405..372831- (Nannochloropsis oceanica) ATGTCCAGCCCTACCCCTACACTCGCGCCTGCCCCTGCCTCCAAAGCGCA AGCGGACGACGGGCACGAGTGGCATGACGCCCGGGAAGGGGACTTCCCGC CGCTTCCATCTTGGTCTTTATCCCTCCCCGACCCACAACAAGAGCTTCGT CGACGTAAAACTGCTTCGACCACTACCGTCGCTGAGCAACAGACCACTAT TGAGTTGTCGTCCGTCTCGGCTTCCACCAGCTCTAGCACCGCTTCCACGC CTCCCCCTCCTCCAGCCGTGGAAAAGCGGTGGCCTATCGAGTCCCGACGG CCCCTGGGTGGGTTTGAAACATTCTTCCATACCACGGTGCCCTACGGACT CGGCTGCATCTACTATGTCATTGACTTTGAAGGACCTCCCGACACGGACC TGCTGGCCGAAGCCATGAGTTTCCAAGTCAAGGAGCATCCCAACCTCCGT TCTCGCCTCCTCAATGGCTATTTGGAAGTCATTCCTTTTAGTGCGTGTCC ACAGATTGTTATCCCTTACATCGAATCAGAAGACGTGGTGGGGCACACGG AACGATGGATGAAGGAAGCAACAGTCCTCAAGGCCGGCCGTGAGCCCTAC CTGTGGCAGCTGGCCCTGCACCATACACCCTCCTCCGAGTCGCACCACCT CCTCTTTCTTATCCATCACGCCATTTCCGACGGTGATTCCATCCTGCGCT GCCTTCAGTCCCTGATGACCGGCATGGCCTCCCTGTCCCCCCTGTCCCCC CATGAGCGCGAGCGAAAATTGGAGCAAGTCAAGGCCTTGCCGCAGCTCCC CAGCGCTGACGTCCAGTTGTACCCGCGCTACAATGGCTACTACCTCATTT ACCACTTTCGGGGCTTGTTCAAAGAGCTCTGGAAAGTCTTCCTCCGCCCT CGCATTCCTCGGCCATGCAAAATGACGCTTACGGAAAAGGACCGGACTAC TCGCATGTTCTCCTTCGTCCTGGACGCACCCGACTTCAAGCGGCTGCTCA AAACGTGCAAGATGCAGCAAACTACCGTGACAGGCGCCTTGGTCGCAGCC ACCACGCAGGCGATGGAAGGGTTCATTGAACCGGAGCCGAACCCGTTCAA GTTGAAGGTGGAGATTTTGGTCAATTTCCGCGGCAAGGCGAGTGCTACCA AGGGGTCAGTTGAGTCCCATATGCTCTATGCGACTCCCATGGACGTGATG CTCGAGGCGGGTAACACCCCGGAGACGAGTCTGGATTTCTGGAACACGGC TCGGATTGCCAAGCAAGAAATTGACGCATTTGCTACGGAGCCGCACCGCA TTGTGGATGCCTTAGAGTTCTTCTACGTGATGGGACATCACCCTATCGCC TTCCCCCTGATTCGACTGTTTGGCATTTCTCCCAAGCAGGGACGACAGAA GGCTATTTCTATCTCCAATTTAGGAATGACGGATAAGCTCTTTCAGCCCG CGGGGCCCTGGAGGCTAGGGCGTATGCAGATGGGGATCGATGAGCTCTTG TTTGGACACAGTGTCTTCCTAGCCATGGCGTCCCATGAAGGACGTTTGAA TTTCACTCTATCTTATATTGATCCGATTGTTTCGCGGTCCATGGCGGAGG ACTATGCGCAGGCTGTCATCCGCTCATTGATTGAAGCTTGCCCCCCGTTG GTGGGGGACGTGCCACCTACGCCGCAGACGCCTGTGTCGATTACAGCCAA GCCTGCTTCTTCCTCTCACTCTACGGCAATCAATTTGCTGAGCCAAGAGC CGCGGGGAGGGGGATTGGTCAGTGGTGCGGGCGGGGCGGGTAGACTTGGA GCTGTTGGGGCTTCGGGCCCTGGGTCTACGAGCGCAGGTGGCTCGCCTCG GGCAGCAACAGGAGCAGGAGCAGGAGGAGCAGGAGCAGGAGCAGGAGGGT CAGTAGTGACCAGTGGAAGGGCAGGCGAGATGGGAGTCGTGAGCCCGGCG GCGGGAGGAGGGTCTAGCGCGTTGTCCTCCTCATCGGGTGCCAGGCCCAA GGTGCCGCGGATGGTGGCAGGCTCTTAA back to top
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