NO03G01200.1, NO03G01200.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G01200.1
Unique NameNO03G01200.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2427
Alignment locationchr3:370405..372831 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:370405..372831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO03G01200.1 vs.
Match: EWM29535.1 (alcohol acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 851.3 bits (2198), Expect = 2.100e-243
Identity = 426/554 (76.90%), Postives = 471/554 (85.02%), Query Frame = 0
Query:   19 DDGHEWHDAREGDFPPLPSWSLSLPDPQQELRRRKT--ASTTTVAEQQTTIELSSVSASTSSSTASTPPPPPAVEKRWPIESRRPLGGFETFFHTTVPYGLGCIYYVIDFEGPPDTDLLAEAMSFQVKEHPNLRSRLLNGYLEVIPFSACPQIVIPYIESEDVVGHTERWMKEATVLKAGREPYLWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLMTGMASLSPLSPHERERKLEQVKALPQLPSADVQLYPRYNGYYLIYHFRGLFKELWKVFLRPRIPRPCKMTLTEKDRTTRMFSFVLDAPDFKRLLKTCKMQQTTVTGALVAATTQAMEGFIEPEPNPFKLKVEILVNFRGKASATKGSVESHMLYATPMDVMLEAGNTPETSLDFWNTARIAKQEIDAFATEPHRIVDALEFFYVMGHHPIAFPLIRLFGISPKQGRQKAISISNLGMTDKLFQPAGPWRLGRMQMGIDELLFGHSVFLAMASHEGRLNFTLSYIDPIVSRSMAEDYAQAVIRSLIEACPPLVGDVPPTPQTPVSITAKPAS 571
            +DGHEWHDARE +F  +PSW+LS P P  ELR+RK   AS  +V     T E SS  +S  SS  S+P    AV++ W IE+RR LGGFETFF TTVPYGLGCIYY++DFEGPPDTDLLAEAM FQVK+HPNLRSRL   YLE + F  CPQIV+PYIESEDVVG+TER MK A  LKAGR+PYLWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLM GMASLSPLSPHERERKL QVKALPQL SAD QLYP+YNGYYL+YHFR LF+ELW+V LRPR+PRPC+MTLTE  R TR  SFVLDAPDFKRLLKTCK  QT+VTGALVAAT+QAMEGFIE  P+ FK+KVE+LVNFRGKASAT GS +SH LYA PMD++L AGN  ET L+FW TAR AK+EIDAFATEPHRIVDALEFFY+MGHHPIA PLIRLFG SP+QGRQKA+SISNLG TDKLFQPAGPWRLGRMQMGIDELLFGHSVFLAMASHEGRLNF+LSYI+PIVS++MAE+Y+QAVIR+LI+ACPP   D PPTPQTPVS   K  S
Sbjct:    8 EDGHEWHDAREEEFATVPSWALSSPHPLNELRQRKNPDASDKSVPLPPATPETSSTWSSWLSS--SSPTQSSAVKRDWSIEARRRLGGFETFFRTTVPYGLGCIYYIVDFEGPPDTDLLAEAMRFQVKQHPNLRSRLHGDYLEAVAFEDCPQIVVPYIESEDVVGYTERAMKAAKELKAGRDPYLWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLMEGMASLSPLSPHERERKLAQVKALPQLASADEQLYPQYNGYYLVYHFRTLFRELWRVVLRPRLPRPCQMTLTEAPRVTRCLSFVLDAPDFKRLLKTCKANQTSVTGALVAATSQAMEGFIEGPPSSFKMKVEVLVNFRGKASATLGSKDSHQLYAAPMDMLLPAGNKAETRLEFWRTAREAKREIDAFATEPHRIVDALEFFYIMGHHPIAMPLIRLFGASPRQGRQKALSISNLGSTDKLFQPAGPWRLGRMQMGIDELLFGHSVFLAMASHEGRLNFSLSYIEPIVSKAMAENYSQAVIRALIDACPPASEDAPPTPQTPVSRILKSKS 559          
The following BLAST results are available for this feature:
BLAST of NO03G01200.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29535.12.100e-24376.90alcohol acetyltransferase [Nannochloropsis gaditan... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01200NO03G01200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G01200.1NO03G01200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G01200.1.cds1NO03G01200.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G01200.1 ID=NO03G01200.1|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2427bp
ACAGGGCCAACCATGTCCAGCCCTACCCCTACACTCGCGCCTGCCCCTGC
CTCCAAAGCGCAAGCGGACGACGGGCACGAGTGGCATGACGCCCGGGAAG
GGGACTTCCCGCCGCTTCCATCTTGGTCTTTATCCCTCCCCGACCCACAA
CAAGAGCTTCGTCGACGTAAAACTGCTTCGACCACTACCGTCGCTGAGCA
ACAGACCACTATTGAGTTGTCGTCCGTCTCGGCTTCCACCAGCTCTAGCA
CCGCTTCCACGCCTCCCCCTCCTCCAGCCGTGGAAAAGCGGTGGCCTATC
GAGTCCCGACGGCCCCTGGGTGGGTTTGAAACATTCTTCCATACCACGGT
GCCCTACGGACTCGGCTGCATCTACTATGTCATTGACTTTGAAGGACCTC
CCGACACGGACCTGCTGGCCGAAGCCATGAGTTTCCAAGTCAAGGAGCAT
CCCAACCTCCGTTCTCGCCTCCTCAATGGCTATTTGGAAGTCATTCCTTT
TAGTGCGTGTCCACAGATTGTTATCCCTTACATCGAATCAGAAGACGTGG
TGGGGCACACGGAACGATGGATGAAGGAAGCAACAGTCCTCAAGGCCGGC
CGTGAGCCCTACCTGTGGCAGCTGGCCCTGCACCATACACCCTCCTCCGA
GTCGCACCACCTCCTCTTTCTTATCCATCACGCCATTTCCGACGGTGATT
CCATCCTGCGCTGCCTTCAGTCCCTGATGACCGGCATGGCCTCCCTGTCC
CCCCTGTCCCCCCATGAGCGCGAGCGAAAATTGGAGCAAGTCAAGGCCTT
GCCGCAGCTCCCCAGCGCTGACGTCCAGTTGTACCCGCGCTACAATGGCT
ACTACCTCATTTACCACTTTCGGGGCTTGTTCAAAGAGCTCTGGAAAGTC
TTCCTCCGCCCTCGCATTCCTCGGCCATGCAAAATGACGCTTACGGAAAA
GGACCGGACTACTCGCATGTTCTCCTTCGTCCTGGACGCACCCGACTTCA
AGCGGCTGCTCAAAACGTGCAAGATGCAGCAAACTACCGTGACAGGCGCC
TTGGTCGCAGCCACCACGCAGGCGATGGAAGGGTTCATTGAACCGGAGCC
GAACCCGTTCAAGTTGAAGGTGGAGATTTTGGTCAATTTCCGCGGCAAGG
CGAGTGCTACCAAGGGGTCAGTTGAGTCCCATATGCTCTATGCGACTCCC
ATGGACGTGATGCTCGAGGCGGGTAACACCCCGGAGACGAGTCTGGATTT
CTGGAACACGGCTCGGATTGCCAAGCAAGAAATTGACGCATTTGCTACGG
AGCCGCACCGCATTGTGGATGCCTTAGAGTTCTTCTACGTGATGGGACAT
CACCCTATCGCCTTCCCCCTGATTCGACTGTTTGGCATTTCTCCCAAGCA
GGGACGACAGAAGGCTATTTCTATCTCCAATTTAGGAATGACGGATAAGC
TCTTTCAGCCCGCGGGGCCCTGGAGGCTAGGGCGTATGCAGATGGGGATC
GATGAGCTCTTGTTTGGACACAGTGTCTTCCTAGCCATGGCGTCCCATGA
AGGACGTTTGAATTTCACTCTATCTTATATTGATCCGATTGTTTCGCGGT
CCATGGCGGAGGACTATGCGCAGGCTGTCATCCGCTCATTGATTGAAGCT
TGCCCCCCGTTGGTGGGGGACGTGCCACCTACGCCGCAGACGCCTGTGTC
GATTACAGCCAAGCCTGCTTCTTCCTCTCACTCTACGGCAATCAATTTGC
TGAGCCAAGAGCCGCGGGGAGGGGGATTGGTCAGTGGTGCGGGCGGGGCG
GGTAGACTTGGAGCTGTTGGGGCTTCGGGCCCTGGGTCTACGAGCGCAGG
TGGCTCGCCTCGGGCAGCAACAGGAGCAGGAGCAGGAGGAGCAGGAGCAG
GAGCAGGAGGGTCAGTAGTGACCAGTGGAAGGGCAGGCGAGATGGGAGTC
GTGAGCCCGGCGGCGGGAGGAGGGTCTAGCGCGTTGTCCTCCTCATCGGG
TGCCAGGCCCAAGGTGCCGCGGATGGTGGCAGGCTCTTAAAGCCAAAAAA
GACTTATAGATTATGGTTGGAGGGAGAGGGGGAAAAAGAGAAGAGGATAA
TCGAATGCGTAGGTCTTAACATTCGAGCATTACTTAATATACTTTAGTAC
CACCTTTATATGCGATACATGTACGTGGTATGGGGCTGCACTTTCCTGTC
AGCTGTCGGAGAAACGGCGGATGCACACACCTTCCCATCTCCACCCGGAA
AAGGGCGGGGGAGAGTGTCCTTTATTATAGCTATCACGATTTGTAAAGTG
AGGATAATTACGTGACAGCCGCATACTAGAAATCAATATTAAAACAAGCT
AGGCAGGGAGATACAGAGCTCTAGATGGTAAGAGAACAAATATACAACAA
ATTATACTGACATAGTTTTTGATGCCA
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protein sequence of NO03G01200.1

>NO03G01200.1-protein ID=NO03G01200.1-protein|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=676bp
MSSPTPTLAPAPASKAQADDGHEWHDAREGDFPPLPSWSLSLPDPQQELR
RRKTASTTTVAEQQTTIELSSVSASTSSSTASTPPPPPAVEKRWPIESRR
PLGGFETFFHTTVPYGLGCIYYVIDFEGPPDTDLLAEAMSFQVKEHPNLR
SRLLNGYLEVIPFSACPQIVIPYIESEDVVGHTERWMKEATVLKAGREPY
LWQLALHHTPSSESHHLLFLIHHAISDGDSILRCLQSLMTGMASLSPLSP
HERERKLEQVKALPQLPSADVQLYPRYNGYYLIYHFRGLFKELWKVFLRP
RIPRPCKMTLTEKDRTTRMFSFVLDAPDFKRLLKTCKMQQTTVTGALVAA
TTQAMEGFIEPEPNPFKLKVEILVNFRGKASATKGSVESHMLYATPMDVM
LEAGNTPETSLDFWNTARIAKQEIDAFATEPHRIVDALEFFYVMGHHPIA
FPLIRLFGISPKQGRQKAISISNLGMTDKLFQPAGPWRLGRMQMGIDELL
FGHSVFLAMASHEGRLNFTLSYIDPIVSRSMAEDYAQAVIRSLIEACPPL
VGDVPPTPQTPVSITAKPASSSHSTAINLLSQEPRGGGLVSGAGGAGRLG
AVGASGPGSTSAGGSPRAATGAGAGGAGAGAGGSVVTSGRAGEMGVVSPA
AGGGSSALSSSSGARPKVPRMVAGS*
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mRNA from alignment at chr3:370405..372831-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G01200.1 ID=NO03G01200.1|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2427bp|location=Sequence derived from alignment at chr3:370405..372831- (Nannochloropsis oceanica)
ACAGGGCCAACCATGTCCAGCCCTACCCCTACACTCGCGCCTGCCCCTGC CTCCAAAGCGCAAGCGGACGACGGGCACGAGTGGCATGACGCCCGGGAAG GGGACTTCCCGCCGCTTCCATCTTGGTCTTTATCCCTCCCCGACCCACAA CAAGAGCTTCGTCGACGTAAAACTGCTTCGACCACTACCGTCGCTGAGCA ACAGACCACTATTGAGTTGTCGTCCGTCTCGGCTTCCACCAGCTCTAGCA CCGCTTCCACGCCTCCCCCTCCTCCAGCCGTGGAAAAGCGGTGGCCTATC GAGTCCCGACGGCCCCTGGGTGGGTTTGAAACATTCTTCCATACCACGGT GCCCTACGGACTCGGCTGCATCTACTATGTCATTGACTTTGAAGGACCTC CCGACACGGACCTGCTGGCCGAAGCCATGAGTTTCCAAGTCAAGGAGCAT CCCAACCTCCGTTCTCGCCTCCTCAATGGCTATTTGGAAGTCATTCCTTT TAGTGCGTGTCCACAGATTGTTATCCCTTACATCGAATCAGAAGACGTGG TGGGGCACACGGAACGATGGATGAAGGAAGCAACAGTCCTCAAGGCCGGC CGTGAGCCCTACCTGTGGCAGCTGGCCCTGCACCATACACCCTCCTCCGA GTCGCACCACCTCCTCTTTCTTATCCATCACGCCATTTCCGACGGTGATT CCATCCTGCGCTGCCTTCAGTCCCTGATGACCGGCATGGCCTCCCTGTCC CCCCTGTCCCCCCATGAGCGCGAGCGAAAATTGGAGCAAGTCAAGGCCTT GCCGCAGCTCCCCAGCGCTGACGTCCAGTTGTACCCGCGCTACAATGGCT ACTACCTCATTTACCACTTTCGGGGCTTGTTCAAAGAGCTCTGGAAAGTC TTCCTCCGCCCTCGCATTCCTCGGCCATGCAAAATGACGCTTACGGAAAA GGACCGGACTACTCGCATGTTCTCCTTCGTCCTGGACGCACCCGACTTCA AGCGGCTGCTCAAAACGTGCAAGATGCAGCAAACTACCGTGACAGGCGCC TTGGTCGCAGCCACCACGCAGGCGATGGAAGGGTTCATTGAACCGGAGCC GAACCCGTTCAAGTTGAAGGTGGAGATTTTGGTCAATTTCCGCGGCAAGG CGAGTGCTACCAAGGGGTCAGTTGAGTCCCATATGCTCTATGCGACTCCC ATGGACGTGATGCTCGAGGCGGGTAACACCCCGGAGACGAGTCTGGATTT CTGGAACACGGCTCGGATTGCCAAGCAAGAAATTGACGCATTTGCTACGG AGCCGCACCGCATTGTGGATGCCTTAGAGTTCTTCTACGTGATGGGACAT CACCCTATCGCCTTCCCCCTGATTCGACTGTTTGGCATTTCTCCCAAGCA GGGACGACAGAAGGCTATTTCTATCTCCAATTTAGGAATGACGGATAAGC TCTTTCAGCCCGCGGGGCCCTGGAGGCTAGGGCGTATGCAGATGGGGATC GATGAGCTCTTGTTTGGACACAGTGTCTTCCTAGCCATGGCGTCCCATGA AGGACGTTTGAATTTCACTCTATCTTATATTGATCCGATTGTTTCGCGGT CCATGGCGGAGGACTATGCGCAGGCTGTCATCCGCTCATTGATTGAAGCT TGCCCCCCGTTGGTGGGGGACGTGCCACCTACGCCGCAGACGCCTGTGTC GATTACAGCCAAGCCTGCTTCTTCCTCTCACTCTACGGCAATCAATTTGC TGAGCCAAGAGCCGCGGGGAGGGGGATTGGTCAGTGGTGCGGGCGGGGCG GGTAGACTTGGAGCTGTTGGGGCTTCGGGCCCTGGGTCTACGAGCGCAGG TGGCTCGCCTCGGGCAGCAACAGGAGCAGGAGCAGGAGGAGCAGGAGCAG GAGCAGGAGGGTCAGTAGTGACCAGTGGAAGGGCAGGCGAGATGGGAGTC GTGAGCCCGGCGGCGGGAGGAGGGTCTAGCGCGTTGTCCTCCTCATCGGG TGCCAGGCCCAAGGTGCCGCGGATGGTGGCAGGCTCTTAAAGCCAAAAAA GACTTATAGATTATGGTTGGAGGGAGAGGGGGAAAAAGAGAAGAGGATAA TCGAATGCGTAGGTCTTAACATTCGAGCATTACTTAATATACTTTAGTAC CACCTTTATATGCGATACATGTACGTGGTATGGGGCTGCACTTTCCTGTC AGCTGTCGGAGAAACGGCGGATGCACACACCTTCCCATCTCCACCCGGAA AAGGGCGGGGGAGAGTGTCCTTTATTATAGCTATCACGATTTGTAAAGTG AGGATAATTACGTGACAGCCGCATACTAGAAATCAATATTAAAACAAGCT AGGCAGGGAGATACAGAGCTCTAGATGGTAAGAGAACAAATATACAACAA ATTATACTGACATAGTTTTTGATGCCA
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Coding sequence (CDS) from alignment at chr3:370405..372831-

>NO03G01200.1 ID=NO03G01200.1|Name=NO03G01200.1|organism=Nannochloropsis oceanica|type=CDS|length=2028bp|location=Sequence derived from alignment at chr3:370405..372831- (Nannochloropsis oceanica)
ATGTCCAGCCCTACCCCTACACTCGCGCCTGCCCCTGCCTCCAAAGCGCA
AGCGGACGACGGGCACGAGTGGCATGACGCCCGGGAAGGGGACTTCCCGC
CGCTTCCATCTTGGTCTTTATCCCTCCCCGACCCACAACAAGAGCTTCGT
CGACGTAAAACTGCTTCGACCACTACCGTCGCTGAGCAACAGACCACTAT
TGAGTTGTCGTCCGTCTCGGCTTCCACCAGCTCTAGCACCGCTTCCACGC
CTCCCCCTCCTCCAGCCGTGGAAAAGCGGTGGCCTATCGAGTCCCGACGG
CCCCTGGGTGGGTTTGAAACATTCTTCCATACCACGGTGCCCTACGGACT
CGGCTGCATCTACTATGTCATTGACTTTGAAGGACCTCCCGACACGGACC
TGCTGGCCGAAGCCATGAGTTTCCAAGTCAAGGAGCATCCCAACCTCCGT
TCTCGCCTCCTCAATGGCTATTTGGAAGTCATTCCTTTTAGTGCGTGTCC
ACAGATTGTTATCCCTTACATCGAATCAGAAGACGTGGTGGGGCACACGG
AACGATGGATGAAGGAAGCAACAGTCCTCAAGGCCGGCCGTGAGCCCTAC
CTGTGGCAGCTGGCCCTGCACCATACACCCTCCTCCGAGTCGCACCACCT
CCTCTTTCTTATCCATCACGCCATTTCCGACGGTGATTCCATCCTGCGCT
GCCTTCAGTCCCTGATGACCGGCATGGCCTCCCTGTCCCCCCTGTCCCCC
CATGAGCGCGAGCGAAAATTGGAGCAAGTCAAGGCCTTGCCGCAGCTCCC
CAGCGCTGACGTCCAGTTGTACCCGCGCTACAATGGCTACTACCTCATTT
ACCACTTTCGGGGCTTGTTCAAAGAGCTCTGGAAAGTCTTCCTCCGCCCT
CGCATTCCTCGGCCATGCAAAATGACGCTTACGGAAAAGGACCGGACTAC
TCGCATGTTCTCCTTCGTCCTGGACGCACCCGACTTCAAGCGGCTGCTCA
AAACGTGCAAGATGCAGCAAACTACCGTGACAGGCGCCTTGGTCGCAGCC
ACCACGCAGGCGATGGAAGGGTTCATTGAACCGGAGCCGAACCCGTTCAA
GTTGAAGGTGGAGATTTTGGTCAATTTCCGCGGCAAGGCGAGTGCTACCA
AGGGGTCAGTTGAGTCCCATATGCTCTATGCGACTCCCATGGACGTGATG
CTCGAGGCGGGTAACACCCCGGAGACGAGTCTGGATTTCTGGAACACGGC
TCGGATTGCCAAGCAAGAAATTGACGCATTTGCTACGGAGCCGCACCGCA
TTGTGGATGCCTTAGAGTTCTTCTACGTGATGGGACATCACCCTATCGCC
TTCCCCCTGATTCGACTGTTTGGCATTTCTCCCAAGCAGGGACGACAGAA
GGCTATTTCTATCTCCAATTTAGGAATGACGGATAAGCTCTTTCAGCCCG
CGGGGCCCTGGAGGCTAGGGCGTATGCAGATGGGGATCGATGAGCTCTTG
TTTGGACACAGTGTCTTCCTAGCCATGGCGTCCCATGAAGGACGTTTGAA
TTTCACTCTATCTTATATTGATCCGATTGTTTCGCGGTCCATGGCGGAGG
ACTATGCGCAGGCTGTCATCCGCTCATTGATTGAAGCTTGCCCCCCGTTG
GTGGGGGACGTGCCACCTACGCCGCAGACGCCTGTGTCGATTACAGCCAA
GCCTGCTTCTTCCTCTCACTCTACGGCAATCAATTTGCTGAGCCAAGAGC
CGCGGGGAGGGGGATTGGTCAGTGGTGCGGGCGGGGCGGGTAGACTTGGA
GCTGTTGGGGCTTCGGGCCCTGGGTCTACGAGCGCAGGTGGCTCGCCTCG
GGCAGCAACAGGAGCAGGAGCAGGAGGAGCAGGAGCAGGAGCAGGAGGGT
CAGTAGTGACCAGTGGAAGGGCAGGCGAGATGGGAGTCGTGAGCCCGGCG
GCGGGAGGAGGGTCTAGCGCGTTGTCCTCCTCATCGGGTGCCAGGCCCAA
GGTGCCGCGGATGGTGGCAGGCTCTTAA
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Synonyms
Publications