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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr3 | genome | chr3:317095..319191 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO03G00970.1 vs.
Match: XP_005853443.1 (amine oxidase [Nannochloropsis gaditana CCMP526]; EKU22915.1 amine oxidase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1166.4 bits (3016), Expect = 0.000e+0 Identity = 563/679 (82.92%), Postives = 610/679 (89.84%), Query Frame = 0
Query: 1 MGNQNSVYFGAPPVRKKAPQHADIQEAWRQIAARVSRNGG-----KRRVAVVGSGVTGLGASYHLLTGSAAGEEVEVVVYEASATAGGHAHTEQVTEANGKVVGCDTGFMVFNHQNYPNMVELFAELGVEDEDTNMSFAVSMDEGNVEWCSDSVKTLTAPVYRAMIKDMLRFNRTASSLLLAEPGDPKRAWSLGEFLEREGYGPEFTNYYIVPMCAALWSSSAADVLASSAYAMLTFMDNHCMLQLFNRPQWKTVAGRSQTYIEKIVALLGERLRLNTGVKKVVVLEKGKVEVTDMSYKAEVFDDVIFACHPDQALELLEIGQQERLAPYLGQFRYASNICYLHSDPKLMPRKREAWGSWNYIGSTEGVQGEDNAKPVFVTYWLNQLQNLQTDTPYFVSLNPSFPPDPALVHKVLNESHPQFTPATEEAQRRMTEVQGVDGLWFCGAWMGHGFHEDGLRSGLEVATALTGQKVGWMPPEAEAPVYPMSKAHLYARGFWERCQDGFGRWASGPIRAFLSNSIQEGCLVLRLPGTGDKVYFGDRKAGREETVVLRVQSWWFFVRVALEYDLGLARAYMAGEFEVEGTGWNSDGLTKLFLLFIRNRDAPMGGGRFAVGALLTSWIGYGLNFLRYRLSMDNSLAGSRHNISAHYDIGNDLYTLMLDKALMMYSSAIYDLELTP 675
MGNQNSVYFGAPPVRKKAPQHADIQEAWRQIA++V+R+ G KR+VA++GSGV GLGA+YHLLT +A GEEVE+VVYEAS T GGHAHTE V E +GKV+ CDTGFMVFNHQNYPN+VELFAELGV+DE+TNMSFAVSMDEG VEWCS+SVKTL PVYRAM+KDMLRFNRTAS+LLLAEP DP+RAW+L EFLE+E YGPEFTNYYIVPMCAALWSSSAADVLA+SAYA+LTFMDNHCMLQLFNRPQWKTVA RSQTY++KIVALLGERLRLN VKKVVV KGKVEVTD SY AE FD+ IFACHPDQ+L LLE + RLAPYL F+YA N CYLHSDP+LMPRK+EAWGSWNYIG++ G+ G KPVFVTYWLNQLQNL+T+TPYFVSLNP FPPD AL HK+L ESHPQFTPATE AQRRMTEVQG DGLWFCGAWMGHGFHEDGLRSGLEVATAL+GQK WMPPEAEAPVYPM KAH+ AR WERCQD G+ A PIR FL++SIQEGCLVLRLPGTGDK++FGDR AGR+ETVVLRVQSWWFFVRVALEYDLGLARAYMAGEFEVEGTGWNSDGLT+LFLLFIRNRDAP GG RFAV ALLTSWIGYGLNFLRYRLSMDNSLAGSR NISAHYDIGNDLYTLMLDK+LMMYSSAIY LELTP
Sbjct: 1 MGNQNSVYFGAPPVRKKAPQHADIQEAWRQIASKVARDKGFEHGRKRKVAIIGSGVAGLGAAYHLLTCTAPGEEVELVVYEASGTPGGHAHTELVREEDGKVIACDTGFMVFNHQNYPNLVELFAELGVDDENTNMSFAVSMDEGKVEWCSESVKTLAGPVYRAMLKDMLRFNRTASNLLLAEPEDPRRAWTLAEFLEKEKYGPEFTNYYIVPMCAALWSSSAADVLAASAYALLTFMDNHCMLQLFNRPQWKTVAQRSQTYVQKIVALLGERLRLNAPVKKVVVHGKGKVEVTDASYHAETFDEAIFACHPDQSLALLEGEARVRLAPYLEAFKYAPNACYLHSDPRLMPRKKEAWGSWNYIGTSAGMLGPGREKPVFVTYWLNQLQNLETETPYFVSLNPLFPPDRALTHKILRESHPQFTPATEAAQRRMTEVQGQDGLWFCGAWMGHGFHEDGLRSGLEVATALSGQKAAWMPPEAEAPVYPMVKAHMNARSTWERCQDLLGQLACVPIRNFLASSIQEGCLVLRLPGTGDKLWFGDRTAGRKETVVLRVQSWWFFVRVALEYDLGLARAYMAGEFEVEGTGWNSDGLTRLFLLFIRNRDAPSGGKRFAVSALLTSWIGYGLNFLRYRLSMDNSLAGSRQNISAHYDIGNDLYTLMLDKSLMMYSSAIYHLELTP 679
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO03G00970.1 ID=NO03G00970.1|Name=NO03G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=2097bp ATGGGGAACCAAAACAGCGTTTATTTCGGTGCGCCCCCCGTCCGGAAGAA GGCGCCACAGCATGCCGACATCCAAGAGGCCTGGAGGCAGATAGCGGCCC GCGTCTCCCGAAACGGTGGCAAGCGCAGGGTGGCCGTGGTGGGCTCGGGC GTGACGGGCTTGGGTGCGTCGTACCATCTATTAACCGGTTCTGCGGCCGG AGAAGAGGTGGAAGTTGTGGTGTACGAGGCCAGTGCCACAGCGGGCGGGC ACGCACACACGGAGCAGGTGACAGAGGCGAATGGCAAGGTAGTGGGCTGC GATACGGGCTTCATGGTCTTTAATCACCAGAATTACCCTAACATGGTGGA ACTTTTTGCGGAGCTGGGCGTGGAAGACGAGGACACCAACATGAGCTTTG CCGTTTCGATGGACGAAGGCAATGTGGAGTGGTGCTCGGATTCAGTCAAG ACCTTGACTGCTCCTGTGTATCGCGCCATGATTAAGGACATGCTTCGTTT CAACCGCACGGCTTCCAGCTTGCTGTTGGCTGAGCCCGGAGATCCGAAGC GGGCGTGGAGTTTGGGGGAGTTTTTGGAAAGGGAGGGATATGGACCCGAG TTTACGAATTATTACATCGTGCCCATGTGCGCGGCGCTATGGTCGTCGTC GGCGGCTGACGTGCTGGCCTCGTCTGCGTATGCCATGTTGACGTTCATGG ATAACCACTGCATGCTTCAGTTGTTTAATCGCCCTCAGTGGAAGACGGTG GCAGGGCGAAGCCAAACGTACATCGAGAAGATTGTGGCGTTGCTAGGGGA GAGGCTACGGTTGAATACGGGGGTGAAGAAGGTGGTGGTCTTGGAGAAGG GGAAAGTGGAGGTGACGGATATGAGCTATAAGGCCGAAGTATTCGATGAT GTTATTTTTGCTTGTCATCCTGATCAAGCTTTGGAATTGCTGGAGATAGG GCAACAGGAGAGGTTGGCGCCTTATCTGGGTCAATTCAGATATGCGTCGA ACATCTGTTATTTACATAGTGATCCGAAGCTGATGCCACGCAAGAGGGAA GCCTGGGGGAGCTGGAACTATATCGGGAGCACGGAGGGGGTTCAAGGGGA GGACAATGCCAAGCCTGTGTTTGTAACCTACTGGCTAAACCAGCTGCAGA ACCTGCAAACGGACACCCCTTACTTCGTCTCCCTCAATCCCTCGTTTCCT CCCGACCCGGCGCTGGTGCACAAGGTTCTGAATGAGAGCCATCCGCAATT CACGCCTGCGACAGAGGAGGCACAGAGAAGGATGACGGAGGTCCAGGGCG TCGATGGTCTCTGGTTTTGTGGCGCCTGGATGGGGCATGGTTTCCATGAG GACGGGTTGCGGTCAGGGCTTGAGGTGGCGACAGCACTGACGGGCCAGAA GGTAGGATGGATGCCCCCTGAAGCAGAGGCACCAGTGTACCCGATGAGTA AGGCACATTTGTATGCGCGGGGGTTTTGGGAGCGGTGTCAGGATGGATTC GGACGGTGGGCAAGTGGGCCGATTCGGGCGTTTTTAAGCAATTCGATCCA AGAGGGGTGTTTGGTGTTGAGGCTGCCGGGGACGGGAGATAAGGTGTATT TTGGGGATCGGAAGGCGGGAAGGGAGGAAACGGTGGTACTGCGGGTGCAA AGTTGGTGGTTTTTTGTACGTGTAGCGTTGGAGTATGATTTGGGCTTGGC ACGCGCGTATATGGCGGGGGAGTTTGAGGTGGAGGGAACGGGGTGGAACA GCGACGGGTTGACCAAGTTGTTTCTGTTGTTCATCCGGAATCGGGATGCA CCGATGGGAGGAGGGAGGTTCGCAGTAGGGGCCTTGTTGACGAGTTGGAT CGGGTATGGATTGAATTTTTTGAGGTACAGATTATCCATGGATAACAGCC TGGCAGGATCCAGGCACAACATCTCGGCCCATTACGACATTGGAAATGAC TTGTATACGCTCATGCTAGACAAGGCATTAATGATGTACTCTTCGGCGAT TTATGACTTGGAACTGACCCCTATTGCCCGGGAGGCTTTCTTCCCGTCTC CGAACGCGCATAGTAATGGGGGGGTGGGGATGGAGGAGGGGCGTTGA back to topprotein sequence of NO03G00970.1 >NO03G00970.1-protein ID=NO03G00970.1-protein|Name=NO03G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=699bp MGNQNSVYFGAPPVRKKAPQHADIQEAWRQIAARVSRNGGKRRVAVVGSG VTGLGASYHLLTGSAAGEEVEVVVYEASATAGGHAHTEQVTEANGKVVGC DTGFMVFNHQNYPNMVELFAELGVEDEDTNMSFAVSMDEGNVEWCSDSVK TLTAPVYRAMIKDMLRFNRTASSLLLAEPGDPKRAWSLGEFLEREGYGPE FTNYYIVPMCAALWSSSAADVLASSAYAMLTFMDNHCMLQLFNRPQWKTV AGRSQTYIEKIVALLGERLRLNTGVKKVVVLEKGKVEVTDMSYKAEVFDD VIFACHPDQALELLEIGQQERLAPYLGQFRYASNICYLHSDPKLMPRKRE AWGSWNYIGSTEGVQGEDNAKPVFVTYWLNQLQNLQTDTPYFVSLNPSFP PDPALVHKVLNESHPQFTPATEEAQRRMTEVQGVDGLWFCGAWMGHGFHE DGLRSGLEVATALTGQKVGWMPPEAEAPVYPMSKAHLYARGFWERCQDGF GRWASGPIRAFLSNSIQEGCLVLRLPGTGDKVYFGDRKAGREETVVLRVQ SWWFFVRVALEYDLGLARAYMAGEFEVEGTGWNSDGLTKLFLLFIRNRDA PMGGGRFAVGALLTSWIGYGLNFLRYRLSMDNSLAGSRHNISAHYDIGND LYTLMLDKALMMYSSAIYDLELTPIAREAFFPSPNAHSNGGVGMEEGR* back to topmRNA from alignment at chr3:317095..319191- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO03G00970.1 ID=NO03G00970.1|Name=NO03G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=2097bp|location=Sequence derived from alignment at chr3:317095..319191- (Nannochloropsis oceanica) ATGGGGAACCAAAACAGCGTTTATTTCGGTGCGCCCCCCGTCCGGAAGAA
GGCGCCACAGCATGCCGACATCCAAGAGGCCTGGAGGCAGATAGCGGCCC
GCGTCTCCCGAAACGGTGGCAAGCGCAGGGTGGCCGTGGTGGGCTCGGGC
GTGACGGGCTTGGGTGCGTCGTACCATCTATTAACCGGTTCTGCGGCCGG
AGAAGAGGTGGAAGTTGTGGTGTACGAGGCCAGTGCCACAGCGGGCGGGC
ACGCACACACGGAGCAGGTGACAGAGGCGAATGGCAAGGTAGTGGGCTGC
GATACGGGCTTCATGGTCTTTAATCACCAGAATTACCCTAACATGGTGGA
ACTTTTTGCGGAGCTGGGCGTGGAAGACGAGGACACCAACATGAGCTTTG
CCGTTTCGATGGACGAAGGCAATGTGGAGTGGTGCTCGGATTCAGTCAAG
ACCTTGACTGCTCCTGTGTATCGCGCCATGATTAAGGACATGCTTCGTTT
CAACCGCACGGCTTCCAGCTTGCTGTTGGCTGAGCCCGGAGATCCGAAGC
GGGCGTGGAGTTTGGGGGAGTTTTTGGAAAGGGAGGGATATGGACCCGAG
TTTACGAATTATTACATCGTGCCCATGTGCGCGGCGCTATGGTCGTCGTC
GGCGGCTGACGTGCTGGCCTCGTCTGCGTATGCCATGTTGACGTTCATGG
ATAACCACTGCATGCTTCAGTTGTTTAATCGCCCTCAGTGGAAGACGGTG
GCAGGGCGAAGCCAAACGTACATCGAGAAGATTGTGGCGTTGCTAGGGGA
GAGGCTACGGTTGAATACGGGGGTGAAGAAGGTGGTGGTCTTGGAGAAGG
GGAAAGTGGAGGTGACGGATATGAGCTATAAGGCCGAAGTATTCGATGAT
GTTATTTTTGCTTGTCATCCTGATCAAGCTTTGGAATTGCTGGAGATAGG
GCAACAGGAGAGGTTGGCGCCTTATCTGGGTCAATTCAGATATGCGTCGA
ACATCTGTTATTTACATAGTGATCCGAAGCTGATGCCACGCAAGAGGGAA
GCCTGGGGGAGCTGGAACTATATCGGGAGCACGGAGGGGGTTCAAGGGGA
GGACAATGCCAAGCCTGTGTTTGTAACCTACTGGCTAAACCAGCTGCAGA
ACCTGCAAACGGACACCCCTTACTTCGTCTCCCTCAATCCCTCGTTTCCT
CCCGACCCGGCGCTGGTGCACAAGGTTCTGAATGAGAGCCATCCGCAATT
CACGCCTGCGACAGAGGAGGCACAGAGAAGGATGACGGAGGTCCAGGGCG
TCGATGGTCTCTGGTTTTGTGGCGCCTGGATGGGGCATGGTTTCCATGAG
GACGGGTTGCGGTCAGGGCTTGAGGTGGCGACAGCACTGACGGGCCAGAA
GGTAGGATGGATGCCCCCTGAAGCAGAGGCACCAGTGTACCCGATGAGTA
AGGCACATTTGTATGCGCGGGGGTTTTGGGAGCGGTGTCAGGATGGATTC
GGACGGTGGGCAAGTGGGCCGATTCGGGCGTTTTTAAGCAATTCGATCCA
AGAGGGGTGTTTGGTGTTGAGGCTGCCGGGGACGGGAGATAAGGTGTATT
TTGGGGATCGGAAGGCGGGAAGGGAGGAAACGGTGGTACTGCGGGTGCAA
AGTTGGTGGTTTTTTGTACGTGTAGCGTTGGAGTATGATTTGGGCTTGGC
ACGCGCGTATATGGCGGGGGAGTTTGAGGTGGAGGGAACGGGGTGGAACA
GCGACGGGTTGACCAAGTTGTTTCTGTTGTTCATCCGGAATCGGGATGCA
CCGATGGGAGGAGGGAGGTTCGCAGTAGGGGCCTTGTTGACGAGTTGGAT
CGGGTATGGATTGAATTTTTTGAGGTACAGATTATCCATGGATAACAGCC
TGGCAGGATCCAGGCACAACATCTCGGCCCATTACGACATTGGAAATGAC
TTGTATACGCTCATGCTAGACAAGGCATTAATGATGTACTCTTCGGCGAT
TTATGACTTGGAACTGACCCCTATTGCCCGGGAGGCTTTCTTCCCGTCTC
CGAACGCGCATAGTAATGGGGGGGTGGGGATGGAGGAGGGGCGTTGA back to topCoding sequence (CDS) from alignment at chr3:317095..319191- >NO03G00970.1 ID=NO03G00970.1|Name=NO03G00970.1|organism=Nannochloropsis oceanica|type=CDS|length=2097bp|location=Sequence derived from alignment at chr3:317095..319191- (Nannochloropsis oceanica) ATGGGGAACCAAAACAGCGTTTATTTCGGTGCGCCCCCCGTCCGGAAGAA GGCGCCACAGCATGCCGACATCCAAGAGGCCTGGAGGCAGATAGCGGCCC GCGTCTCCCGAAACGGTGGCAAGCGCAGGGTGGCCGTGGTGGGCTCGGGC GTGACGGGCTTGGGTGCGTCGTACCATCTATTAACCGGTTCTGCGGCCGG AGAAGAGGTGGAAGTTGTGGTGTACGAGGCCAGTGCCACAGCGGGCGGGC ACGCACACACGGAGCAGGTGACAGAGGCGAATGGCAAGGTAGTGGGCTGC GATACGGGCTTCATGGTCTTTAATCACCAGAATTACCCTAACATGGTGGA ACTTTTTGCGGAGCTGGGCGTGGAAGACGAGGACACCAACATGAGCTTTG CCGTTTCGATGGACGAAGGCAATGTGGAGTGGTGCTCGGATTCAGTCAAG ACCTTGACTGCTCCTGTGTATCGCGCCATGATTAAGGACATGCTTCGTTT CAACCGCACGGCTTCCAGCTTGCTGTTGGCTGAGCCCGGAGATCCGAAGC GGGCGTGGAGTTTGGGGGAGTTTTTGGAAAGGGAGGGATATGGACCCGAG TTTACGAATTATTACATCGTGCCCATGTGCGCGGCGCTATGGTCGTCGTC GGCGGCTGACGTGCTGGCCTCGTCTGCGTATGCCATGTTGACGTTCATGG ATAACCACTGCATGCTTCAGTTGTTTAATCGCCCTCAGTGGAAGACGGTG GCAGGGCGAAGCCAAACGTACATCGAGAAGATTGTGGCGTTGCTAGGGGA GAGGCTACGGTTGAATACGGGGGTGAAGAAGGTGGTGGTCTTGGAGAAGG GGAAAGTGGAGGTGACGGATATGAGCTATAAGGCCGAAGTATTCGATGAT GTTATTTTTGCTTGTCATCCTGATCAAGCTTTGGAATTGCTGGAGATAGG GCAACAGGAGAGGTTGGCGCCTTATCTGGGTCAATTCAGATATGCGTCGA ACATCTGTTATTTACATAGTGATCCGAAGCTGATGCCACGCAAGAGGGAA GCCTGGGGGAGCTGGAACTATATCGGGAGCACGGAGGGGGTTCAAGGGGA GGACAATGCCAAGCCTGTGTTTGTAACCTACTGGCTAAACCAGCTGCAGA ACCTGCAAACGGACACCCCTTACTTCGTCTCCCTCAATCCCTCGTTTCCT CCCGACCCGGCGCTGGTGCACAAGGTTCTGAATGAGAGCCATCCGCAATT CACGCCTGCGACAGAGGAGGCACAGAGAAGGATGACGGAGGTCCAGGGCG TCGATGGTCTCTGGTTTTGTGGCGCCTGGATGGGGCATGGTTTCCATGAG GACGGGTTGCGGTCAGGGCTTGAGGTGGCGACAGCACTGACGGGCCAGAA GGTAGGATGGATGCCCCCTGAAGCAGAGGCACCAGTGTACCCGATGAGTA AGGCACATTTGTATGCGCGGGGGTTTTGGGAGCGGTGTCAGGATGGATTC GGACGGTGGGCAAGTGGGCCGATTCGGGCGTTTTTAAGCAATTCGATCCA AGAGGGGTGTTTGGTGTTGAGGCTGCCGGGGACGGGAGATAAGGTGTATT TTGGGGATCGGAAGGCGGGAAGGGAGGAAACGGTGGTACTGCGGGTGCAA AGTTGGTGGTTTTTTGTACGTGTAGCGTTGGAGTATGATTTGGGCTTGGC ACGCGCGTATATGGCGGGGGAGTTTGAGGTGGAGGGAACGGGGTGGAACA GCGACGGGTTGACCAAGTTGTTTCTGTTGTTCATCCGGAATCGGGATGCA CCGATGGGAGGAGGGAGGTTCGCAGTAGGGGCCTTGTTGACGAGTTGGAT CGGGTATGGATTGAATTTTTTGAGGTACAGATTATCCATGGATAACAGCC TGGCAGGATCCAGGCACAACATCTCGGCCCATTACGACATTGGAAATGAC TTGTATACGCTCATGCTAGACAAGGCATTAATGATGTACTCTTCGGCGAT TTATGACTTGGAACTGACCCCTATTGCCCGGGAGGCTTTCTTCCCGTCTC CGAACGCGCATAGTAATGGGGGGGTGGGGATGGAGGAGGGGCGTTGA back to top
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