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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr2 | genome | chr2:1562852..1565667 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G05860.1 ID=NO02G05860.1|Name=NO02G05860.1|organism=Nannochloropsis oceanica|type=mRNA|length=2723bp
ACAGCCCGGCCAAAGACATGGATCTGGTCTCGCAGCAGCCACCGCGACCG
CCCCCAGAGGATCCGCCGCAGGCACAGGCACACCAGCAGCAGCAGCAACA
GCAACAGCAACATGAGCAGCCGACGCAGGATGCAGGAAAAGATCAGCAGC
AGCCAGTCCCTCCTGGCTTGACACCCCCTCCCGTCCGTTTGTCTGCGCCT
CCGCATGTGATGCCCCTCAAGTTCCCACCCCGCTTCCGGGCAGATAAGAC
GCCCCTTCTGCAGACGGTGCCCGCCACAACGAGTGTCGTGCCTGGGAAAA
GTCCGAGTAACTTTGTCACAAGCAGCAGCAGCACGTGCATGTCCGGGTTG
GCATCTACCGCAACGCTACACGAGCCCTCGAGAGATACGGAGGGTTTGAC
CTCGTCATCGAAGATGAAAGATGACGCAGCACAAACCGCAGGCAAGCTCG
CATCCCTCCCTGTGACGGTGGACACTGATGCTGCCACGGCTATCGACACC
GGCATAGCCACTCCCTCCACCTCCACAACCTCACTCGCTTCCTCGCCCTT
CTTTCATCATCTGTCTCCGAGAACTGTAGATCCGGATCTCTCTGGGGATG
CTGAGGGACAAAAGGAACAGCAGCATCAACTCCCGCAGCACCAGCAACAG
CAGCAGCAGCAGCACCCGCAGCAGCAGCAGCACCCGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAAGGACAGCGGGAGGATGATGATTTGG
ACGAGGACATTGACGACGACGCATTGGACGAGAGGGACAACCAGACTGAT
GACGAGGAGGAGGAAGACAGGTATCAAAGGGAGCAGAACGCAGGTACCTA
TCCCCTTCAACGGCAGCAGCAGCACCAGCATCAACAGTATCAGGGAGGAG
GAAATGGAGGCGGCGGTGGCGAAGGAGGAGGAGATGGCGGAAGGTCCGCC
TTAACAATGATGCCAAGGACGTCTTCCACCTCGGTCTTTTCCCCCTCTTC
ATCGCAACAGGAGCAGTCTCAAGAATCGCACTATTCCTCCTCCTCCTCCA
TCTCCTCCATCCAACCCAAGGGCACCACGGGCGCACCAATCAATCGAAAC
ATCGGAGGAGGCAGCATGCGGCATAGTAAGATGAGTATGTATAAAGGCGT
GTGCTACATAAAAGCCCGTGAAAAATGGGAGGTGCATATATACCAGCATG
GGAAGAAGAAGCACATCGGGTATTATGACTTGGAGGTTGATGCGGCCAAA
GCCTACGATGCGGCGGTGATTAAAAAGTGCGGGAAACGGGCAGTTACCAA
CTTCGACCAGGTTACGGGAGAATTCAATCCGGAGGCCAAGACGACCCTGC
AAGCGGCGGCCTTGGAGCCGGGGGGAGGAGGGGGGGAGGAGACAAAGAGT
GAGGCGTCTTCGATGTCAACAGTAGCAGAAGAAGGAAGAGGAGTGGCAGG
AGGAGGGGGAGGAGGAAGAGGAGGAGGAGGGAACGCAATGACGTCATTCG
ACCACCACAAGCAGCGGTATCAGCAGCAGTTGCAGCAGCTTTACCGCAAC
CCACGTCCGCAGCTGCAGCAAGAGAAGCAAGCGCACCAAGATGAAACCCC
GCCCTCGGCCTCCAGGGAGGCTGGCACGGCAAAGGGTGCAACCAGTAGAG
GCTGGCTTTCTTCCTCCGCCTCCTCCTCCTCTCTTTCTTCTCACCCGGGC
CCCTATCCTTCCCCGTCACCTCATCCGCGTGGTGTCGAGTCACAATATCG
CTCACCCCAGGCCCAGCAACAGCGGCAGCTACAGCAGCACCAGCAGCAGC
AACAACAACAGCAGCAGCAGCAGCAGCAGCACCAGGACCAGCAGCAACAA
CAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACA
GCAACAGCAGCAACAGCAACAGCAGCAGCACCGGTTAGGTGCTCTGAATG
ATTCTGCGCTCAGCAGGGAAGGAAGAGAAGGGGAGGGGGGCCAGAACCAG
TCCCGTCGCCCGATCTCCTCGTCTGTCCCTTCTTCGATTGCGAGGATGCG
GCCGTCTTTGTCACCTGAAGAAATAAGAGGCAGTGAGGTTGATGGTGATT
ATGGAGAAGGAGGAGGAGTAGAGGTGGAACTGCAGCGACTGCATGACATT
GATGAGAAACGTGCTCGTCTTCACGAAAGAGAACAAGAAGAAGGAGTGGA
AGTTCAAGGAGGAGAGCCGCGGTCGTCTCTGTCCGCCTACATGCCTCTTT
CGATCTCCTCCTCCTATCGTACCCGGATTAACAATAGTAGCAACAGCAAT
AACAGCAAACGGCTTGGTGTTTTGGGCCGAAGCCACGTTGATGTCAGTCA
GCCGAGCCATATATCGTATGTGCCTGTGCGAGGAGGAGAAGAAGGAGGAG
ATAAGGAGGATGAAGAAGATGGGGAGACGATTTCGACTTTGTTGTTGCAG
GTGACCTCGTATTTGATGCGGGAGAGTCGTTGGCTTCAACAGGCAAAGAA
ACAGAGAGGAGGGATTATCGGAGAAAGAGCTGGCCGAGGGTCAGAAGGAG
GAAAAAGAAGAAGAAAATGTGGTGAGCAGCTGGGGCGACTACCTAAGAGG
AGACTGACCGAGCAGGCGGCAAGTGAGGCGCAGGAGGAGGAGGAAAAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGAATAAGGAGGAGAGGGGGGGGGGAG
GGGGAAAGAGAAAAGAACAGTGA back to topprotein sequence of NO02G05860.1 >NO02G05860.1-protein ID=NO02G05860.1-protein|Name=NO02G05860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=902bp
MDLVSQQPPRPPPEDPPQAQAHQQQQQQQQQHEQPTQDAGKDQQQPVPPG
LTPPPVRLSAPPHVMPLKFPPRFRADKTPLLQTVPATTSVVPGKSPSNFV
TSSSSTCMSGLASTATLHEPSRDTEGLTSSSKMKDDAAQTAGKLASLPVT
VDTDAATAIDTGIATPSTSTTSLASSPFFHHLSPRTVDPDLSGDAEGQKE
QQHQLPQHQQQQQQQHPQQQQHPQQQQQQQQQQQQQGQREDDDLDEDIDD
DALDERDNQTDDEEEEDRYQREQNAGTYPLQRQQQHQHQQYQGGGNGGGG
GEGGGDGGRSALTMMPRTSSTSVFSPSSSQQEQSQESHYSSSSSISSIQP
KGTTGAPINRNIGGGSMRHSKMSMYKGVCYIKAREKWEVHIYQHGKKKHI
GYYDLEVDAAKAYDAAVIKKCGKRAVTNFDQVTGEFNPEAKTTLQAAALE
PGGGGGEETKSEASSMSTVAEEGRGVAGGGGGGRGGGGNAMTSFDHHKQR
YQQQLQQLYRNPRPQLQQEKQAHQDETPPSASREAGTAKGATSRGWLSSS
ASSSSLSSHPGPYPSPSPHPRGVESQYRSPQAQQQRQLQQHQQQQQQQQQ
QQQQHQDQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHRLGALNDSALSR
EGREGEGGQNQSRRPISSSVPSSIARMRPSLSPEEIRGSEVDGDYGEGGG
VEVELQRLHDIDEKRARLHEREQEEGVEVQGGEPRSSLSAYMPLSISSSY
RTRINNSSNSNNSKRLGVLGRSHVDVSQPSHISYVPVRGGEEGGDKEDEE
DGETISTLLLQVTSYLMRESRWLQQAKKQRGGIIGERAGRGSEGGKRRRK
CGEQLGRLPKRRLTEQAASEAQEEEEKEEEEEEEEENKEERGGGGGKRKE
Q* back to topmRNA from alignment at chr2:1562852..1565667- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G05860.1 ID=NO02G05860.1|Name=NO02G05860.1|organism=Nannochloropsis oceanica|type=mRNA|length=2816bp|location=Sequence derived from alignment at chr2:1562852..1565667- (Nannochloropsis oceanica)
ACAGCCCGGCCAAAGACATGGATCTGGTCTCGCAGCAGCCACCGCGACCG
CCCCCAGAGGATCCGCCGCAGGCACAGGCACACCAGCAGCAGCAGCAACA
GCAACAGCAACATGAGCAGCCGACGCAGGATGCAGGAAAAGATCAGCAGC
AGCCAGTCCCTCCTGGCTTGACACCCCCTCCCGTCCGTTTGTCTGCGCCT
CCGCATGTGATGCCCCTCAAGTTCCCACCCCGCTTCCGGGCAGATAAGAC
GCCCCTTCTGCAGACGGTGCCCGCCACAACGAGTGTCGTGCCTGGGAAAA
GTCCGAGTAACTTTGTCACAAGCAGCAGCAGCACGTGCATGTCCGGGTTG
GCATCTACCGCAACGCTACACGAGCCCTCGAGAGATACGGAGGGTTTGAC
CTCGTCATCGAAGATGAAAGATGACGCAGCACAAACCGCAGGCAAGCTCG
CATCCCTCCCTGTGACGGTGGACACTGATGCTGCCACGGCTATCGACACC
GGCATAGCCACTCCCTCCACCTCCACAACCTCACTCGCTTCCTCGCCCTT
CTTTCATCATCTGTCTCCGAGAACTGTAGATCCGGATCTCTCTGGGGATG
CTGAGGGACAAAAGGAACAGCAGCATCAACTCCCGCAGCACCAGCAACAG
CAGCAGCAGCAGCACCCGCAGCAGCAGCAGCACCCGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAAGGACAGCGGGAGGATGATGATTTGG
ACGAGGACATTGACGACGACGCATTGGACGAGAGGGACAACCAGACTGAT
GACGAGGAGGAGGAAGACAGGTATCAAAGGGAGCAGAACGCAGGTACCTA
TCCCCTTCAACGGCAGCAGCAGCACCAGCATCAACAGTATCAGGGAGGAG
GAAATGGAGGCGGCGGTGGCGAAGGAGGAGGAGATGGCGGAAGGTCCGCC
TTAACAATGATGCCAAGGACGTCTTCCACCTCGGTCTTTTCCCCCTCTTC
ATCGCAACAGGAGCAGTCTCAAGAATCGCACTATTCCTCCTCCTCCTCCA
TCTCCTCCATCCAACCCAAGGGCACCACGGGCGCACCAATCAATCGAAAC
ATCGGAGGAGGCAGCATGCGGCATAGTAAGATGAGTATGTATAAAGGCGT
GTGCTACATAAAAGCCCGTGAAAAATGGGAGGTGCATATATACCAGCATG
GGAAGAAGAAGCACATCGGGTATTATGACTTGGAGGTTGATGCGGCCAAA
GCCTACGATGCGGCGGTGATTAAAAAGTGCGGGAAACGGGCAGTTACCAA
CTTCGACCAGGTACGGCCAAAGCGTTTAGACCTGCTCGATCCCTAATCTT
GTGGGAGGTTTACTTACCGTGTGTTTTCCCTCTTTTTGATTGTACAAACA
CAGGTTACGGGAGAATTCAATCCGGAGGCCAAGACGACCCTGCAAGCGGC
GGCCTTGGAGCCGGGGGGAGGAGGGGGGGAGGAGACAAAGAGTGAGGCGT
CTTCGATGTCAACAGTAGCAGAAGAAGGAAGAGGAGTGGCAGGAGGAGGG
GGAGGAGGAAGAGGAGGAGGAGGGAACGCAATGACGTCATTCGACCACCA
CAAGCAGCGGTATCAGCAGCAGTTGCAGCAGCTTTACCGCAACCCACGTC
CGCAGCTGCAGCAAGAGAAGCAAGCGCACCAAGATGAAACCCCGCCCTCG
GCCTCCAGGGAGGCTGGCACGGCAAAGGGTGCAACCAGTAGAGGCTGGCT
TTCTTCCTCCGCCTCCTCCTCCTCTCTTTCTTCTCACCCGGGCCCCTATC
CTTCCCCGTCACCTCATCCGCGTGGTGTCGAGTCACAATATCGCTCACCC
CAGGCCCAGCAACAGCGGCAGCTACAGCAGCACCAGCAGCAGCAACAACA
ACAGCAGCAGCAGCAGCAGCAGCACCAGGACCAGCAGCAACAACAACAAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAG
CAGCAACAGCAACAGCAGCAGCACCGGTTAGGTGCTCTGAATGATTCTGC
GCTCAGCAGGGAAGGAAGAGAAGGGGAGGGGGGCCAGAACCAGTCCCGTC
GCCCGATCTCCTCGTCTGTCCCTTCTTCGATTGCGAGGATGCGGCCGTCT
TTGTCACCTGAAGAAATAAGAGGCAGTGAGGTTGATGGTGATTATGGAGA
AGGAGGAGGAGTAGAGGTGGAACTGCAGCGACTGCATGACATTGATGAGA
AACGTGCTCGTCTTCACGAAAGAGAACAAGAAGAAGGAGTGGAAGTTCAA
GGAGGAGAGCCGCGGTCGTCTCTGTCCGCCTACATGCCTCTTTCGATCTC
CTCCTCCTATCGTACCCGGATTAACAATAGTAGCAACAGCAATAACAGCA
AACGGCTTGGTGTTTTGGGCCGAAGCCACGTTGATGTCAGTCAGCCGAGC
CATATATCGTATGTGCCTGTGCGAGGAGGAGAAGAAGGAGGAGATAAGGA
GGATGAAGAAGATGGGGAGACGATTTCGACTTTGTTGTTGCAGGTGACCT
CGTATTTGATGCGGGAGAGTCGTTGGCTTCAACAGGCAAAGAAACAGAGA
GGAGGGATTATCGGAGAAAGAGCTGGCCGAGGGTCAGAAGGAGGAAAAAG
AAGAAGAAAATGTGGTGAGCAGCTGGGGCGACTACCTAAGAGGAGACTGA
CCGAGCAGGCGGCAAGTGAGGCGCAGGAGGAGGAGGAAAAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGAATAAGGAGGAGAGGGGGGGGGGAGGGGGAAA
GAGAAAAGAACAGTGA back to topCoding sequence (CDS) from alignment at chr2:1562852..1565667- >NO02G05860.1 ID=NO02G05860.1|Name=NO02G05860.1|organism=Nannochloropsis oceanica|type=CDS|length=2706bp|location=Sequence derived from alignment at chr2:1562852..1565667- (Nannochloropsis oceanica)
ATGGATCTGGTCTCGCAGCAGCCACCGCGACCGCCCCCAGAGGATCCGCC
GCAGGCACAGGCACACCAGCAGCAGCAGCAACAGCAACAGCAACATGAGC
AGCCGACGCAGGATGCAGGAAAAGATCAGCAGCAGCCAGTCCCTCCTGGC
TTGACACCCCCTCCCGTCCGTTTGTCTGCGCCTCCGCATGTGATGCCCCT
CAAGTTCCCACCCCGCTTCCGGGCAGATAAGACGCCCCTTCTGCAGACGG
TGCCCGCCACAACGAGTGTCGTGCCTGGGAAAAGTCCGAGTAACTTTGTC
ACAAGCAGCAGCAGCACGTGCATGTCCGGGTTGGCATCTACCGCAACGCT
ACACGAGCCCTCGAGAGATACGGAGGGTTTGACCTCGTCATCGAAGATGA
AAGATGACGCAGCACAAACCGCAGGCAAGCTCGCATCCCTCCCTGTGACG
GTGGACACTGATGCTGCCACGGCTATCGACACCGGCATAGCCACTCCCTC
CACCTCCACAACCTCACTCGCTTCCTCGCCCTTCTTTCATCATCTGTCTC
CGAGAACTGTAGATCCGGATCTCTCTGGGGATGCTGAGGGACAAAAGGAA
CAGCAGCATCAACTCCCGCAGCACCAGCAACAGCAGCAGCAGCAGCACCC
GCAGCAGCAGCAGCACCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAAGGACAGCGGGAGGATGATGATTTGGACGAGGACATTGACGAC
GACGCATTGGACGAGAGGGACAACCAGACTGATGACGAGGAGGAGGAAGA
CAGGTATCAAAGGGAGCAGAACGCAGGTACCTATCCCCTTCAACGGCAGC
AGCAGCACCAGCATCAACAGTATCAGGGAGGAGGAAATGGAGGCGGCGGT
GGCGAAGGAGGAGGAGATGGCGGAAGGTCCGCCTTAACAATGATGCCAAG
GACGTCTTCCACCTCGGTCTTTTCCCCCTCTTCATCGCAACAGGAGCAGT
CTCAAGAATCGCACTATTCCTCCTCCTCCTCCATCTCCTCCATCCAACCC
AAGGGCACCACGGGCGCACCAATCAATCGAAACATCGGAGGAGGCAGCAT
GCGGCATAGTAAGATGAGTATGTATAAAGGCGTGTGCTACATAAAAGCCC
GTGAAAAATGGGAGGTGCATATATACCAGCATGGGAAGAAGAAGCACATC
GGGTATTATGACTTGGAGGTTGATGCGGCCAAAGCCTACGATGCGGCGGT
GATTAAAAAGTGCGGGAAACGGGCAGTTACCAACTTCGACCAGGTTACGG
GAGAATTCAATCCGGAGGCCAAGACGACCCTGCAAGCGGCGGCCTTGGAG
CCGGGGGGAGGAGGGGGGGAGGAGACAAAGAGTGAGGCGTCTTCGATGTC
AACAGTAGCAGAAGAAGGAAGAGGAGTGGCAGGAGGAGGGGGAGGAGGAA
GAGGAGGAGGAGGGAACGCAATGACGTCATTCGACCACCACAAGCAGCGG
TATCAGCAGCAGTTGCAGCAGCTTTACCGCAACCCACGTCCGCAGCTGCA
GCAAGAGAAGCAAGCGCACCAAGATGAAACCCCGCCCTCGGCCTCCAGGG
AGGCTGGCACGGCAAAGGGTGCAACCAGTAGAGGCTGGCTTTCTTCCTCC
GCCTCCTCCTCCTCTCTTTCTTCTCACCCGGGCCCCTATCCTTCCCCGTC
ACCTCATCCGCGTGGTGTCGAGTCACAATATCGCTCACCCCAGGCCCAGC
AACAGCGGCAGCTACAGCAGCACCAGCAGCAGCAACAACAACAGCAGCAG
CAGCAGCAGCAGCACCAGGACCAGCAGCAACAACAACAACAGCAGCAGCA
GCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAGCAGCAACAGC
AACAGCAGCAGCACCGGTTAGGTGCTCTGAATGATTCTGCGCTCAGCAGG
GAAGGAAGAGAAGGGGAGGGGGGCCAGAACCAGTCCCGTCGCCCGATCTC
CTCGTCTGTCCCTTCTTCGATTGCGAGGATGCGGCCGTCTTTGTCACCTG
AAGAAATAAGAGGCAGTGAGGTTGATGGTGATTATGGAGAAGGAGGAGGA
GTAGAGGTGGAACTGCAGCGACTGCATGACATTGATGAGAAACGTGCTCG
TCTTCACGAAAGAGAACAAGAAGAAGGAGTGGAAGTTCAAGGAGGAGAGC
CGCGGTCGTCTCTGTCCGCCTACATGCCTCTTTCGATCTCCTCCTCCTAT
CGTACCCGGATTAACAATAGTAGCAACAGCAATAACAGCAAACGGCTTGG
TGTTTTGGGCCGAAGCCACGTTGATGTCAGTCAGCCGAGCCATATATCGT
ATGTGCCTGTGCGAGGAGGAGAAGAAGGAGGAGATAAGGAGGATGAAGAA
GATGGGGAGACGATTTCGACTTTGTTGTTGCAGGTGACCTCGTATTTGAT
GCGGGAGAGTCGTTGGCTTCAACAGGCAAAGAAACAGAGAGGAGGGATTA
TCGGAGAAAGAGCTGGCCGAGGGTCAGAAGGAGGAAAAAGAAGAAGAAAA
TGTGGTGAGCAGCTGGGGCGACTACCTAAGAGGAGACTGACCGAGCAGGC
GGCAAGTGAGGCGCAGGAGGAGGAGGAAAAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGAATAAGGAGGAGAGGGGGGGGGGAGGGGGAAAGAGAAAAGAA
CAGTGA back to top
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