NO02G05820.1, NO02G05820.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G05820.1
Unique NameNO02G05820.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2976
Alignment locationchr2:1554898..1558228 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1554898..1558228 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO02G05820.1 vs.
Match: EWM30106.1 (erythromycin esterase [Nannochloropsis gaditana])

HSP 1 Score: 785.8 bits (2028), Expect = 7.100e-224
Identity = 360/449 (80.18%), Postives = 415/449 (92.43%), Query Frame = 0
Query:    1 MDYARAMTDTLEHSKLPLRNERDLDPLLQSIGDKRFVFLGEASHGTHEFYTWRAHITKRLIEEKGFNFVAVEGDWPDCYELNRYIKGFEKEAKHPSDIMKTYFKRWPVWMWGNWEVAALAGWMRQHNLKKAGNMKERVGFYGLDVYSLLESLESIVSYMRDVDGEESIKTAERALACFERVAVMGKEDVGQAYGMAATLTPYSCRDEVVELLVRVRKEAAKLAETKPQDDEMAENSLSAEINTKVVLDAEKYYRIMVDGSDDSWNARDSHMHDTLQRLANYYSPNSKAIIWAHNTHNGDARATDMGRAGMHNIGQLARETWGKDQVHLVGFGTYQGSVMAGERWGAEMKVMPLPSGRPGTWEDVCHRAGKGQNMILLPNVLQQPLFEKRIGHRAVGVVYNPQRDSVQYVPSVLRNRYDAFVFVDTTQAVHALKIKANPTEMPETYPWGV 450
            M+YA+AMT+TLE  KLPLRN+RDLDPLL+SIGDKRFVFLGE+SHGTHEFYTWRAHITKRLIEEKGFNFV VEGDWPDCYELNRYIKGF+  AKHPSD+MK YFKRWPVWMWGNWEVAAL GWMR+ N+K+    +ERVGFYGLDVYSL+ESLE+IV +MR VDG+ESIK+AERALACFERVA MGKEDVGQAYGMAA LTPYSCR+EVV+LLV+VR+EAAKL+E+ P D+E  EN+LSAE+NTKVVLDAEKYYRIMVDGSDDSWNARD+HMH+TL+RL+++Y P SKAIIWAHNTHNGDARATDM   GMHNIGQLARETWGK+QVHLVG GTYQGSVMAG+RWGA+M+VMPLP G PG+WE +CH AGKGQ+M+++P VL+QPLFEKR+GHRAVGVVYNP RD +QYVPSV++ RYDAFVF+DTT+A+H+LK++A+PTE+PETYPWGV
Sbjct:   85 MEYAKAMTETLEQHKLPLRNDRDLDPLLESIGDKRFVFLGESSHGTHEFYTWRAHITKRLIEEKGFNFVGVEGDWPDCYELNRYIKGFKDSAKHPSDVMKAYFKRWPVWMWGNWEVAALTGWMREFNMKRPA--QERVGFYGLDVYSLMESLEAIVKFMRSVDGDESIKSAERALACFERVATMGKEDVGQAYGMAAALTPYSCRNEVVKLLVKVREEAAKLSES-PHDEEANENALSAELNTKVVLDAEKYYRIMVDGSDDSWNARDTHMHETLRRLSHFYGPKSKAIIWAHNTHNGDARATDMAMGGMHNIGQLARETWGKEQVHLVGLGTYQGSVMAGKRWGADMEVMPLPRGVPGSWEHICHTAGKGQDMLVVPEVLRQPLFEKRVGHRAVGVVYNPSRDRMQYVPSVMKARYDAFVFLDTTRALHSLKLQADPTEVPETYPWGV 530          
The following BLAST results are available for this feature:
BLAST of NO02G05820.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30106.17.100e-22480.18erythromycin esterase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05820NO02G05820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G05820.1NO02G05820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G05820.1.cds1NO02G05820.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G05820.1.cds2NO02G05820.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G05820.1 ID=NO02G05820.1|Name=NO02G05820.1|organism=Nannochloropsis oceanica|type=mRNA|length=2976bp
ACATTCAGCTTCGACAATTGTTGTACCTCCCCACATGTTGGCGGTTATTC
TGAGGAACGTTCTTTCCTTCGTTTCTTCGCGAGCAATGGCAATTACACAA
ACATGCCCCCTGTGGCTCTTTTGTTATGCTTTATACTCATAGATTATGCG
CTCCACAGTGTTTTTATGCACTGTGTTGATCCAGACAGAGGCACACAAGT
GAAGTCACCGCTTTCCGTGTGTGTGCCCCTGGCAAACAACAACATATGTT
CCTGTCGACTTCCGCCTCCGCCATTAGAAAGTAGCCAGTCATTCTTTTTT
TGTGCGACGTGAACTTACATTCTCCATTTTGGGACCACCACAATTTAGAA
AAGAGTCTAAGCAAAATTACTTTCTCCTTTACGGCGTCCACCTTGCTTTG
TCGGCGCCGCCGCTTCGGCACCAGCAACATCATTCTGTCGTTGGTTTATC
TGGCCTCTTCCGCCACTCGCATCACCGCCGCTGCCACCGTCCCGGTCTTC
CTGCCCACCACTTACAACCACGCTCTCCAACCTTTTGCCACTAAAGCTGC
CTCCCGCCTGGTCTCACAAGAAACTTTTGCCACCATCCCTGAGACCTTGC
CAGACTTCGACAAAACAATGGATTATGCCCGTGCTATGACCGACACGCTG
GAGCATTCCAAGCTGCCCCTCCGCAATGAACGTGACTTAGATCCTCTGCT
TCAATCGATTGGTGACAAGCGCTTCGTTTTCTTGGGCGAGGCTTCTCATG
GTACGCACGAATTCTACACCTGGCGAGCGCACATCACCAAGCGTCTCATC
GAGGAGAAAGGCTTCAACTTTGTCGCTGTCGAAGGGGACTGGCCCGATTG
CTACGAACTTAATCGTTATATTAAGGGCTTTGAGAAAGAAGCTAAACACC
CTTCCGACATCATGAAGACTTATTTCAAGCGGTGGCCTGTATGGATGTGG
GGCAATTGGGAAGTCGCTGCGCTGGCTGGGTGGATGCGGCAGCATAACTT
GAAAAAGGCGGGAAATATGAAAGAACGCGTGGGATTTTATGGGTTGGATG
TGTACTCGTTGCTGGAAAGTTTGGAGTCGATTGTGAGCTACATGCGTGAT
GTGGACGGAGAAGAGTCGATTAAGACTGCGGAGCGGGCCTTGGCGTGTTT
CGAGCGGGTGGCGGTAATGGGAAAGGAAGATGTGGGGCAGGCCTATGGAA
TGGCCGCGACTCTCACTCCGTACTCATGCCGCGACGAGGTCGTCGAATTG
CTTGTGAGGGTGAGAAAGGAAGCCGCCAAGCTTGCCGAGACTAAGCCCCA
GGACGACGAGATGGCGGAGAATTCGTTGAGTGCAGAAATCAATACGAAGG
TGGTGCTTGATGCTGAAAAATATTACCGAATCATGGTAGATGGGTCAGAC
GATTCGTGGAATGCCCGCGACAGTCACATGCACGACACTCTTCAACGCCT
CGCAAATTATTACTCGCCCAACAGCAAGGCTATCATTTGGGCACATAATA
CTCATAATGGAGATGCCCGCGCCACGGATATGGGAAGGGCTGGAATGCAT
AACATTGGGCAACTTGCCCGAGAGACGTGGGGAAAGGATCAGGTGCATTT
GGTAGGATTTGGGACGTACCAGGGCTCGGTCATGGCCGGGGAGCGTTGGG
GTGCAGAGATGAAAGTCATGCCTTTGCCGTCTGGTCGCCCTGGAACGTGG
GAGGACGTGTGCCATCGGGCGGGGAAAGGTCAGAACATGATTTTGTTGCC
CAACGTCCTGCAGCAGCCCTTGTTTGAGAAGCGTATTGGGCATCGGGCTG
TAGGGGTGGTGTATAACCCTCAGCGTGACTCCGTCCAATACGTGCCGTCC
GTACTTAGGAATCGCTATGACGCCTTTGTGTTTGTCGATACCACTCAGGC
TGTTCACGCTCTCAAGATCAAAGCCAACCCCACTGAAATGCCCGAGACGT
ACCCCTGGGGAGTGTAAGAGCAAGGGAAATGGGTCATTTAAGGGAGAGGT
GGCCGGGGTCAGTAGCCGACATACATGTGGATGGGTAAATGGTGGAAAGC
ATTGCTAATTTCATCTTTGAGACTAGCGCTTTGGATTACCAAAAAGGAGG
AACAAAGAGAAGTGGTAGCGAAAGACACGGTGGGTGGATGAGACAGAAGC
GCACCGAAAAATTGCATCATGGCTGAAGAAGGCACATTGTCAGCAACTAA
ATGTGTAAAAAAGGAGAAAGCGTCCGATAGCGAGCAGGGCCATAGATGTC
CAGAGATAATCAATACGCGTGCACGATGAGCAAGACATTTGAAAAGCAGT
ATTTATCCAAGAAGACGTTCTCAAACGAGAAAGTCAATCTAAACCCAACT
TGAGGTGGGGCTGTCCCGGTGAACTATTCCTTTCTCATAAAAGGATCAAC
CTTCCTTAATGGGGGTTAGGATGTCCCCGTGAGGCAAGGGTTTATGGTAG
ACCATGGGGGGCTGCAAGAACAATCGCACACACAAATGCACAAATTGTAA
TGCGAAGACAACTTAAAAACACATATTATTCATTTATGAGCCGATAGAAC
TTCAGGGGCCCACTTAGTTGCTCCATTGCACAAGTGCAAGTGTAAAAATG
TGTCATCCATTCTGCTTGATTATTAGAAAGATGAATATTTTCGAAAGAAT
GCTGCTAGCAAGTAAAGGAGCAATATCGGTAAGGGCTATGATGGGTCGAA
AGAAAAGGAGAATAACTTTGTAGGGGAATGAGGAGTTTAAGTAAAACGAG
GCATTCTCGGTAATGGAATTAATGGCAGTGCCAGGTGCGACCAAGTCAGG
CCACGGCCATGGATGGTAGGTCCGACAGAAGAGAAATAGGCAACAGACGT
CCCTTGGTTGATCTGCCCCTCTATTTTGCCTTGTATCAAGTAAGAGAAAT
CATAGCGATAACGAAAAAAACAATCGGAACACGAAAAGAGGCTTAACTAC
TATCCTTAGATTCCTACGTCAACTTT
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protein sequence of NO02G05820.1

>NO02G05820.1-protein ID=NO02G05820.1-protein|Name=NO02G05820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MDYARAMTDTLEHSKLPLRNERDLDPLLQSIGDKRFVFLGEASHGTHEFY
TWRAHITKRLIEEKGFNFVAVEGDWPDCYELNRYIKGFEKEAKHPSDIMK
TYFKRWPVWMWGNWEVAALAGWMRQHNLKKAGNMKERVGFYGLDVYSLLE
SLESIVSYMRDVDGEESIKTAERALACFERVAVMGKEDVGQAYGMAATLT
PYSCRDEVVELLVRVRKEAAKLAETKPQDDEMAENSLSAEINTKVVLDAE
KYYRIMVDGSDDSWNARDSHMHDTLQRLANYYSPNSKAIIWAHNTHNGDA
RATDMGRAGMHNIGQLARETWGKDQVHLVGFGTYQGSVMAGERWGAEMKV
MPLPSGRPGTWEDVCHRAGKGQNMILLPNVLQQPLFEKRIGHRAVGVVYN
PQRDSVQYVPSVLRNRYDAFVFVDTTQAVHALKIKANPTEMPETYPWGV*
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mRNA from alignment at chr2:1554898..1558228-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G05820.1 ID=NO02G05820.1|Name=NO02G05820.1|organism=Nannochloropsis oceanica|type=mRNA|length=3331bp|location=Sequence derived from alignment at chr2:1554898..1558228- (Nannochloropsis oceanica)
ACATTCAGCTTCGACAATTGTTGTACCTCCCCACATGTTGGCGGTTATTC TGAGGAACGTTCTTTCCTTCGTTTCTTCGCGAGCAATGGCAATTACACAA ACATGCCCCCTGTGGCTCTTTTGTTATGCTTTATACTCATAGATTATGCG CTCCACAGTGTTTTTATGCACTGTGTTGATCCAGACAGAGGCACACAAGT GAAGTCACCGCTTTCCGTGTGTGTGCCCCTGGCAAACAACAACATATGTT CCTGTCGACTTCCGCCTCCGCCATTAGAAAGTAGCCAGTCATTCTTTTTT TGTGCGACGTGAACTTACATTCTCCATTTTGGGACCACCACAATTTAGAA AAGAGTCTAAGCAAAATTACTTTCTCCTTTACGGCGTCCACCTTGCTTTG TCGGCGCCGCCGCTTCGGCACCAGCAACATCATTCTGTCGTTGGTTTATC TGGCCTCTTCCGCCACTCGCATCACCGCCGCTGCCACCGTCCCGGTCTTC CTGCCCACCACTTACAACCACGCTCTCCAACCTTTTGCCACTAAAGCTGC CTCCCGCCTGGTCTCACAAGAAACTTTTGCCACCATCCCTGAGACCTTGC CAGACTTCGACAAAACAATGGATTATGCCCGTGCTATGACCGACACGCTG GAGCATTCCAAGCTGCCCCTCCGCAATGAACGTGACTTAGATCCTCTGCT TCAATCGATTGGTGACAAGCGCTTCGTTTTCTTGGGCGAGGCTTCTCATG GTACGCACGAATTCTACACCTGGCGAGCGCACATCACCAAGCGTCTCATC GAGGAGAAAGGCTTCAACTTTGTCGCTGTCGAAGGGGACTGGCCCGATTG CTACGAACTTAATCGTTATATTAAGGGCTTTGAGAAAGAAGCTAAACACC CTTCCGACATCATGAAGACTTATTTCAAGCGGTGGCCTGTATGGATGTGG GGCAATTGGGAAGTCGCTGCGCTGGCTGGGTGGATGCGGCAGCATAACTT GAAAAAGGCGGGAAATATGAAAGAACGCGTGGGATTTTATGGGTTGGATG TGTACTCGTTGCTGGAAAGTTTGGAGTCGATTGTGAGCTACATGCGTGAT GTGGACGGAGAAGAGTCGATTAAGACTGCGGAGCGGGCCTTGGCGTGTTT CGAGCGGGTGGCGGTAATGGGAAAGGAAGATGTGGGGCAGGCCTATGGAA TGGCCGCGACTCTCACTCCGTACTCATGCCGCGACGAGGTCGTCGAATTG CTTGTGAGGGTGAGAAAGGAAGCCGCCAAGCTTGCCGAGACTAAGCCCCA GGACGACGAGATGGCGGAGAATTCGTTGAGTGCAGAAATCAATACGAAGG TACGTTGTCTTCGGAGGGTCGGACATCTGAGGTGTTAAGGGTTGTGTATG ATGAGAATGATTGACAGGTGTTTGTTAAAAAGCTTTGATATCATCAATCA AGAGCCTGAGCTAAGTGATGGCGGCATGTTCCAACCATTCATGCTTTCTC ATGCCCGCTGTTCCTGAGCTTTTCTGAGTCCACATCGTCTGGATTTACAT AAACATATCTATGTGACTTTCCTGTCCGAACCGTTTGATTATGGAAATTG GCCTGTATTTCATTCCCAGTCAAACCTGTTCGTATCTTTCCTACCTTCCA AAACCACAATTTCTCATACTCTCTTCTCCTCGCCGAAATACTTTTGTCCT CTAGGTGGTGCTTGATGCTGAAAAATATTACCGAATCATGGTAGATGGGT CAGACGATTCGTGGAATGCCCGCGACAGTCACATGCACGACACTCTTCAA CGCCTCGCAAATTATTACTCGCCCAACAGCAAGGCTATCATTTGGGCACA TAATACTCATAATGGAGATGCCCGCGCCACGGATATGGGAAGGGCTGGAA TGCATAACATTGGGCAACTTGCCCGAGAGACGTGGGGAAAGGATCAGGTG CATTTGGTAGGATTTGGGACGTACCAGGGCTCGGTCATGGCCGGGGAGCG TTGGGGTGCAGAGATGAAAGTCATGCCTTTGCCGTCTGGTCGCCCTGGAA CGTGGGAGGACGTGTGCCATCGGGCGGGGAAAGGTCAGAACATGATTTTG TTGCCCAACGTCCTGCAGCAGCCCTTGTTTGAGAAGCGTATTGGGCATCG GGCTGTAGGGGTGGTGTATAACCCTCAGCGTGACTCCGTCCAATACGTGC CGTCCGTACTTAGGAATCGCTATGACGCCTTTGTGTTTGTCGATACCACT CAGGCTGTTCACGCTCTCAAGATCAAAGCCAACCCCACTGAAATGCCCGA GACGTACCCCTGGGGAGTGTAAGAGCAAGGGAAATGGGTCATTTAAGGGA GAGGTGGCCGGGGTCAGTAGCCGACATACATGTGGATGGGTAAATGGTGG AAAGCATTGCTAATTTCATCTTTGAGACTAGCGCTTTGGATTACCAAAAA GGAGGAACAAAGAGAAGTGGTAGCGAAAGACACGGTGGGTGGATGAGACA GAAGCGCACCGAAAAATTGCATCATGGCTGAAGAAGGCACATTGTCAGCA ACTAAATGTGTAAAAAAGGAGAAAGCGTCCGATAGCGAGCAGGGCCATAG ATGTCCAGAGATAATCAATACGCGTGCACGATGAGCAAGACATTTGAAAA GCAGTATTTATCCAAGAAGACGTTCTCAAACGAGAAAGTCAATCTAAACC CAACTTGAGGTGGGGCTGTCCCGGTGAACTATTCCTTTCTCATAAAAGGA TCAACCTTCCTTAATGGGGGTTAGGATGTCCCCGTGAGGCAAGGGTTTAT GGTAGACCATGGGGGGCTGCAAGAACAATCGCACACACAAATGCACAAAT TGTAATGCGAAGACAACTTAAAAACACATATTATTCATTTATGAGCCGAT AGAACTTCAGGGGCCCACTTAGTTGCTCCATTGCACAAGTGCAAGTGTAA AAATGTGTCATCCATTCTGCTTGATTATTAGAAAGATGAATATTTTCGAA AGAATGCTGCTAGCAAGTAAAGGAGCAATATCGGTAAGGGCTATGATGGG TCGAAAGAAAAGGAGAATAACTTTGTAGGGGAATGAGGAGTTTAAGTAAA ACGAGGCATTCTCGGTAATGGAATTAATGGCAGTGCCAGGTGCGACCAAG TCAGGCCACGGCCATGGATGGTAGGTCCGACAGAAGAGAAATAGGCAACA GACGTCCCTTGGTTGATCTGCCCCTCTATTTTGCCTTGTATCAAGTAAGA GAAATCATAGCGATAACGAAAAAAACAATCGGAACACGAAAAGAGGCTTA ACTACTATCCTTAGATTCCTACGTCAACTTT
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Coding sequence (CDS) from alignment at chr2:1554898..1558228-

>NO02G05820.1 ID=NO02G05820.1|Name=NO02G05820.1|organism=Nannochloropsis oceanica|type=CDS|length=1350bp|location=Sequence derived from alignment at chr2:1554898..1558228- (Nannochloropsis oceanica)
ATGGATTATGCCCGTGCTATGACCGACACGCTGGAGCATTCCAAGCTGCC
CCTCCGCAATGAACGTGACTTAGATCCTCTGCTTCAATCGATTGGTGACA
AGCGCTTCGTTTTCTTGGGCGAGGCTTCTCATGGTACGCACGAATTCTAC
ACCTGGCGAGCGCACATCACCAAGCGTCTCATCGAGGAGAAAGGCTTCAA
CTTTGTCGCTGTCGAAGGGGACTGGCCCGATTGCTACGAACTTAATCGTT
ATATTAAGGGCTTTGAGAAAGAAGCTAAACACCCTTCCGACATCATGAAG
ACTTATTTCAAGCGGTGGCCTGTATGGATGTGGGGCAATTGGGAAGTCGC
TGCGCTGGCTGGGTGGATGCGGCAGCATAACTTGAAAAAGGCGGGAAATA
TGAAAGAACGCGTGGGATTTTATGGGTTGGATGTGTACTCGTTGCTGGAA
AGTTTGGAGTCGATTGTGAGCTACATGCGTGATGTGGACGGAGAAGAGTC
GATTAAGACTGCGGAGCGGGCCTTGGCGTGTTTCGAGCGGGTGGCGGTAA
TGGGAAAGGAAGATGTGGGGCAGGCCTATGGAATGGCCGCGACTCTCACT
CCGTACTCATGCCGCGACGAGGTCGTCGAATTGCTTGTGAGGGTGAGAAA
GGAAGCCGCCAAGCTTGCCGAGACTAAGCCCCAGGACGACGAGATGGCGG
AGAATTCGTTGAGTGCAGAAATCAATACGAAGGTGGTGCTTGATGCTGAA
AAATATTACCGAATCATGGTAGATGGGTCAGACGATTCGTGGAATGCCCG
CGACAGTCACATGCACGACACTCTTCAACGCCTCGCAAATTATTACTCGC
CCAACAGCAAGGCTATCATTTGGGCACATAATACTCATAATGGAGATGCC
CGCGCCACGGATATGGGAAGGGCTGGAATGCATAACATTGGGCAACTTGC
CCGAGAGACGTGGGGAAAGGATCAGGTGCATTTGGTAGGATTTGGGACGT
ACCAGGGCTCGGTCATGGCCGGGGAGCGTTGGGGTGCAGAGATGAAAGTC
ATGCCTTTGCCGTCTGGTCGCCCTGGAACGTGGGAGGACGTGTGCCATCG
GGCGGGGAAAGGTCAGAACATGATTTTGTTGCCCAACGTCCTGCAGCAGC
CCTTGTTTGAGAAGCGTATTGGGCATCGGGCTGTAGGGGTGGTGTATAAC
CCTCAGCGTGACTCCGTCCAATACGTGCCGTCCGTACTTAGGAATCGCTA
TGACGCCTTTGTGTTTGTCGATACCACTCAGGCTGTTCACGCTCTCAAGA
TCAAAGCCAACCCCACTGAAATGCCCGAGACGTACCCCTGGGGAGTGTAA
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Synonyms
Publications