NO02G05800.1, NO02G05800.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G05800.1
Unique NameNO02G05800.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1014
Alignment locationchr2:1548363..1549970 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1548363..1549970 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G05800.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05800NO02G05800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G05800.1NO02G05800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G05800.1.cds1NO02G05800.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G05800.1.cds2NO02G05800.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G05800.1.cds3NO02G05800.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G05800.1.cds4NO02G05800.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G05800.1.cds5NO02G05800.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G05800.1 ID=NO02G05800.1|Name=NO02G05800.1|organism=Nannochloropsis oceanica|type=mRNA|length=1014bp
ATGACCATCACTGCACCAAGACAGCCCCGGGGTTCCTTGTCCCTTACAAA
CATCTCCGTCTCAATTGCCCTGGTCATGGTCCTGACTATCCTGCAGCCCC
TTGGGACGGCCGCCTCCAAGGAAAACAAGATTTCCCCCCTCCAGCGCCTC
AAGCGCTTGACACAAGGACAAGGTGGAAGCGACACCACGGAGAATGCGGC
TGCTGTAAGCGAAAGTGGATCCCCGCTCTTCCCATGGATGACCCCCGCGG
CTGCCGGGTTCATGAACGAGGGAGGGCTACCGGATGAGGACTCCTCCCTC
GGCACGCTCTTTGCGGGTATTTTGGGGGACGAAGGCCGAGAGGACGTGGA
GGGTATTGGCTCAGAAAATGCCATGATCAGGTCCTTGATGTCCGGGTCTA
TGAATCAGAACTTCTTCAAGCAAGGATTGGGCGCGCTTGGAGACGCCATG
GCGCCTGCCGAAGCCGACATTGTTTTCGAATATTTTCCGCCAGTGGCGCT
CATGTCCTCGTGGCAGTCTTACCTCACCAGTAAAAAAAATGGAGACGACA
CAGTCTCGGAGACCGAAGCCAAGCAGAGTGCAGCAAAGGAACTGGTTGGG
AAATTGGCCAAGATGGCGCTTGTGGGAGCGAACCCCGACAAGATCATGGA
CATCGTCAAGGACTTCACTACCACGGGCAAAACCGACGACCCAATCCTGG
CCTCCCTCGTTCAGGATATGCAAGAAACCGGCAACCCCCTGGCCATCGAA
GAGATTCAAGAGAAGTTCTTTCAGAGGGTGATGGGGGAGGAAGGCGGCGG
GGGCTTGACCCTGGCGTCGTTTTATGACACGACCTGGTTGCAGAAGGTGA
GGAAGGACATGGCCGGCAACGAGGCATTTTGGGAGATATTGGGGGAGGAA
GAGGGAGGGTATTTTAAGAAGAAATTGATGCTAGAGGAGGAAGGCGGAGG
GGGCTATGTGCCCTTGAAGCCGAGCGAAATGCCGGACCCGGAAACGTTGT
TGGGGAGGTGGTGA
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protein sequence of NO02G05800.1

>NO02G05800.1-protein ID=NO02G05800.1-protein|Name=NO02G05800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MTITAPRQPRGSLSLTNISVSIALVMVLTILQPLGTAASKENKISPLQRL
KRLTQGQGGSDTTENAAAVSESGSPLFPWMTPAAAGFMNEGGLPDEDSSL
GTLFAGILGDEGREDVEGIGSENAMIRSLMSGSMNQNFFKQGLGALGDAM
APAEADIVFEYFPPVALMSSWQSYLTSKKNGDDTVSETEAKQSAAKELVG
KLAKMALVGANPDKIMDIVKDFTTTGKTDDPILASLVQDMQETGNPLAIE
EIQEKFFQRVMGEEGGGGLTLASFYDTTWLQKVRKDMAGNEAFWEILGEE
EGGYFKKKLMLEEEGGGGYVPLKPSEMPDPETLLGRW*
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mRNA from alignment at chr2:1548363..1549970-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G05800.1 ID=NO02G05800.1|Name=NO02G05800.1|organism=Nannochloropsis oceanica|type=mRNA|length=1608bp|location=Sequence derived from alignment at chr2:1548363..1549970- (Nannochloropsis oceanica)
ATGACCATCACTGCACCAAGACAGCCCCGGGGTTCCTTGTCCCTTACAAA CATCTCCGTCTCAATTGCCCTGGTCATGGTCCTGACTATCCTGCAGCCCC TTGGGACGGCCGCCTCCAAGGAAAACAAGATTTCCCCCCTCCAGCGCCTC AAGCGCTTGACACAAGGACAAGGTGGAAGCGACACCACGGAGAATGCGGC TGCTGTAAGCGAAAGTGGATCCCCGCTCTTCCCATGGATGACCCCCGCGG CTGCCGGGTTCATGAACGAGGGAGGGCTACCGGATGAGGACTCCTCCCTC GGCACGCTCTTTGCGGGTATTTTGGGGGACGAAGGCCGAGAGGACGTGGA GGGTATTGGCTCAGAAAATGCCATGATCAGGTAGGAGGGTGGTGGTTAGA GAGAGCTCGTCTCGGCTGTCGTGTTATCTTTTTATTTTGGCTTACCTTTT CCACCCTCCTTTACCCTCTCCCTCCCTCTCCCTCATCTCCCGCACCCCCA CATACAGGTCCTTGATGTCCGGGTCTATGAATCAGAACTTCTTCAAGCAA GGATTGGGCGCGCTTGGAGAGTACGTGCCTTGTGAATTCTTCTCTTCCTC CATCCCCCCCCCCCTTCTTTCTCTTTAGCTTTCGCGTCCTCATCCTCCCC TTCCCCGCAACACTCCCCTCCCTCTTTCTCTCAGCGCCATGGCGCCTGCC GAAGCCGACATTGTTTTCGAATATTTTCCGCCAGTGGCGCTCATGTCCTC GTGGCAGTCTTACCTCACCAGTAAAAAAAATGGAGACGACACAGTCTCGG TACGTCTCTTTCCCTTCCTTTCCTCCCTCCTTCCATTCCTCCCTCTTCCT TTCCTCCCTCGGGAGTGGGACATCTAACTCACCTCTGTCTCCCTTCCGTT CGCCCCTTCACCCCTCCTCTGCAGGAGACCGAAGCCAAGCAGAGTGCAGC AAAGGAACTGGTTGGGAAATTGGCCAAGATGGCGCTTGTGGGAGCGAACC CCGACAAGATCATGGACATCGTCAAGGACTTCACTACCACGGTAGGAAGG AAGGAAGGAAGGAAGGGAGGAGGGAGGGAGGGAGGGAGAGAGAGAGGGAG GGCCCATGGCAAAGAACCGATAGACAGAAGTAGGCTCTCGACCGCCTTTT GGAGTGGATGCCTTCCGTTGGTCTCACCCTCTCACTCAGTCACTCGATGA AACAAGAATGCTTAGCCGTCTATCTTTTCACCTTCCCCCTCTCCTTCCCC TCCCTCCCTCCCTCCACAGGGCAAAACCGACGACCCAATCCTGGCCTCCC TCGTTCAGGATATGCAAGAAACCGGCAACCCCCTGGCCATCGAAGAGATT CAAGAGAAGTTCTTTCAGAGGGTGATGGGGGAGGAAGGCGGCGGGGGCTT GACCCTGGCGTCGTTTTATGACACGACCTGGTTGCAGAAGGTGAGGAAGG ACATGGCCGGCAACGAGGCATTTTGGGAGATATTGGGGGAGGAAGAGGGA GGGTATTTTAAGAAGAAATTGATGCTAGAGGAGGAAGGCGGAGGGGGCTA TGTGCCCTTGAAGCCGAGCGAAATGCCGGACCCGGAAACGTTGTTGGGGA GGTGGTGA
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Coding sequence (CDS) from alignment at chr2:1548363..1549970-

>NO02G05800.1 ID=NO02G05800.1|Name=NO02G05800.1|organism=Nannochloropsis oceanica|type=CDS|length=1014bp|location=Sequence derived from alignment at chr2:1548363..1549970- (Nannochloropsis oceanica)
ATGACCATCACTGCACCAAGACAGCCCCGGGGTTCCTTGTCCCTTACAAA
CATCTCCGTCTCAATTGCCCTGGTCATGGTCCTGACTATCCTGCAGCCCC
TTGGGACGGCCGCCTCCAAGGAAAACAAGATTTCCCCCCTCCAGCGCCTC
AAGCGCTTGACACAAGGACAAGGTGGAAGCGACACCACGGAGAATGCGGC
TGCTGTAAGCGAAAGTGGATCCCCGCTCTTCCCATGGATGACCCCCGCGG
CTGCCGGGTTCATGAACGAGGGAGGGCTACCGGATGAGGACTCCTCCCTC
GGCACGCTCTTTGCGGGTATTTTGGGGGACGAAGGCCGAGAGGACGTGGA
GGGTATTGGCTCAGAAAATGCCATGATCAGGTCCTTGATGTCCGGGTCTA
TGAATCAGAACTTCTTCAAGCAAGGATTGGGCGCGCTTGGAGACGCCATG
GCGCCTGCCGAAGCCGACATTGTTTTCGAATATTTTCCGCCAGTGGCGCT
CATGTCCTCGTGGCAGTCTTACCTCACCAGTAAAAAAAATGGAGACGACA
CAGTCTCGGAGACCGAAGCCAAGCAGAGTGCAGCAAAGGAACTGGTTGGG
AAATTGGCCAAGATGGCGCTTGTGGGAGCGAACCCCGACAAGATCATGGA
CATCGTCAAGGACTTCACTACCACGGGCAAAACCGACGACCCAATCCTGG
CCTCCCTCGTTCAGGATATGCAAGAAACCGGCAACCCCCTGGCCATCGAA
GAGATTCAAGAGAAGTTCTTTCAGAGGGTGATGGGGGAGGAAGGCGGCGG
GGGCTTGACCCTGGCGTCGTTTTATGACACGACCTGGTTGCAGAAGGTGA
GGAAGGACATGGCCGGCAACGAGGCATTTTGGGAGATATTGGGGGAGGAA
GAGGGAGGGTATTTTAAGAAGAAATTGATGCTAGAGGAGGAAGGCGGAGG
GGGCTATGTGCCCTTGAAGCCGAGCGAAATGCCGGACCCGGAAACGTTGT
TGGGGAGGTGGTGA
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Synonyms
Publications