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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr2 | genome | chr2:1481033..1482613 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G05570.1 ID=NO02G05570.1|Name=NO02G05570.1|organism=Nannochloropsis oceanica|type=mRNA|length=1428bp
GACTCAAACTGTGGCATGCGGGATGGCGAGGCAAGTTCCACCTCGCGTTG
CGTTGCTGCTTGCGTCGTGCTGCCTTTTTGGAACTCATGCATGTCTTCGG
GCATGGCCAAGTACCGCACTCATGGAATAAGGCAGACCGGTGAGTTTGGC
ACTGGAACAGCTACACACACTGCCCGTTGTGTCATTTTGCCCCTCGCGCG
GAGATGGACATGAAGGCTGCTTGATTTTGGCGTTCATCTAGAGCAGTCGC
CGTGGCTTCAAGCCTTTCCTTGTCCCGTCCGACCCCTCTGGTTGACCCGC
CGCACAGAGCCTTTCACCCTCTGAGTGTTGACCGTTGCCAAAACTACACA
TACCAACCATTGTCCTGTATTTTACCCCTCCCTCTTTCGCCTTTTTCTCA
CGCCCTTCCAAACAGCTCTCTGGCCGAAGAAGCCTTTCTGGGCCGCCCGA
TCATATTCGCTGTCGTCCGTGTTGTGCCAAATATACGTCCACGCAAACAC
CTGCTCCGCACCCAGCACACAGAAAAAGAAGAAGTATAAGTGCTAACAGG
ATTACGTGAGCTTGGAGCAGCAGCAGTTCGCGCGAAAGAAAATGCAGAGC
CATCATCACCACCACCATCGCGGCCCCACGGCTACCATGGCGGCGAGCAC
CCACGTCGTCACTTTGGCAGGCCCGTCCGCGCAAGACCTGTCATCCTCGG
TGCAGCAAAAGGCAGGGCAAGGGCATATTTTAAGCTGCGGAAGCAGCAGC
ATTGGCTGTGGCAATAGCTCCCCAGGTCGAAAGCGCAAGTTTGAGGAAGG
GCCTTTCCCCCAAGCCACCAGTAGCAGCAGCAACAACATCAGCAACGGCA
ACGGGAACGCTCCCACGCAACCTTTGTTTCCGACCTCAGCACTCAAACCT
TTCCTTGTCGACAGCAGCAATAACCATGACAGAAACGGCGGAAATGGTGG
CAGCAGCCATGGCGGAGGAGATGAGGCAGACCGTCCCGGTGAGTTCTCCG
GCGTGAGCCATGCCAGCCACGGCGTCAAACAAGCAGTGTCTGCATTCACA
CCCTCGGCGCCACCACCGCCCACTCTTTCCTCTACCTTGCCATCATCGAC
GGAGCCCGTATACGATGGCACTCTAATTGCTGCTGCGGCAGCTGCTTCTG
CTGCTGTAGGTGCTGCCGTTCTACCACACCCTGTCCCCTCCTCCCTCACC
TCCTCGCGCCCCTCCTCCTCCATGCCTCCTCCCCCGCCCCGACCACCCTA
TCAGCTCCAGCAACAGGAAGACCCCTCCTCCCCCCCATCTGCCCTCCCTC
CCTCCCCCTCCTTGATCCATCCCTTGTCTCCGCCTCCTCCTTCCCCTCCT
CCTCCTCCTCCCCCCTCCCCCTTGACGACCCTCCCCCAGGGGAAGGCTTC
CCCTCACTGGCCCGTCGAAAAGAGTTGA back to topprotein sequence of NO02G05570.1 >NO02G05570.1-protein ID=NO02G05570.1-protein|Name=NO02G05570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MQSHHHHHHRGPTATMAASTHVVTLAGPSAQDLSSSVQQKAGQGHILSCG
SSSIGCGNSSPGRKRKFEEGPFPQATSSSSNNISNGNGNAPTQPLFPTSA
LKPFLVDSSNNHDRNGGNGGSSHGGGDEADRPGEFSGVSHASHGVKQAVS
AFTPSAPPPPTLSSTLPSSTEPVYDGTLIAAAAAASAAVGAAVLPHPVPS
SLTSSRPSSSMPPPPPRPPYQLQQQEDPSSPPSALPPSPSLIHPLSPPPP
SPPPPPPPSPLTTLPQGKASPHWPVEKS* back to topmRNA from alignment at chr2:1481033..1482613- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G05570.1 ID=NO02G05570.1|Name=NO02G05570.1|organism=Nannochloropsis oceanica|type=mRNA|length=1581bp|location=Sequence derived from alignment at chr2:1481033..1482613- (Nannochloropsis oceanica)
GACTCAAACTGTGGCATGCGGGATGGCGAGGCAAGTTCCACCTCGCGTTG
CGTTGCTGCTTGCGTCGTGCTGCCTTTTTGGAACTCATGCATGTCTTCGG
GCATGGCCAAGTACCGCACTCATGGAATAAGGCAGACCGGTGAGTTTGGC
ACTGGAACAGCTACACACACTGCCCGTTGTGTCATTTTGCCCCTCGCGCG
GAGATGGACATGAAGGCTGCTTGATTTTGGCGTTCATCTAGAGCAGTCGC
CGTGGCTTCAAGCCTTTCCTTGTCCCGTCCGACCCCTCTGGTTGACCCGC
CGCACAGAGCCTTTCACCCTCTGAGTGTTGACCGTTGCCAAAACTACACA
TACCAACCATTGTCCTGTATTTTACCCCTCCCTCTTTCGCCTTTTTCTCA
CGCCCTTCCAAACAGCTCTCTGGCCGAAGAAGCCTTTCTGGGCCGCCCGA
TCATATTCGCTGTCGTCCGTGTTGTGCCAAATATACGTCCACGCAAACAC
CTGCTCCGCACCCAGCACACAGAAAAAGAAGAAGTATAAGTGCTAACAGG
ATTACGTGAGCTTGGAGCAGCAGCAGTTCGCGCGAAAGAAAATGCAGAGC
CATCATCACCACCACCATCGCGGCCCCACGGCTACCATGGCGGCGAGCAC
CCACGTCGTCACTTTGGCAGGCCCGTCCGCGCAAGACCTGTCATCCTCGG
TGCAGCAAAAGGCAGGGCAAGGGCATATTTTAAGCTGCGGAAGCAGCAGC
ATTGGCTGTGGCAATAGCTCCCCAGGTGAGAAAGACCGAAAGGAAGGGGA
AGGGATCGGTTCGCCACATGGAAAACATCCCAAGGAGTATTTTGAGGGCG
CACCGGGGAATTATAAAAAAGGAGATATGTTACATTAAACCCCACACTGT
CTTGATTGATTTCCCCTCACATGCACAGGTCGAAAGCGCAAGTTTGAGGA
AGGGCCTTTCCCCCAAGCCACCAGTAGCAGCAGCAACAACATCAGCAACG
GCAACGGGAACGCTCCCACGCAACCTTTGTTTCCGACCTCAGCACTCAAA
CCTTTCCTTGTCGACAGCAGCAATAACCATGACAGAAACGGCGGAAATGG
TGGCAGCAGCCATGGCGGAGGAGATGAGGCAGACCGTCCCGGTGAGTTCT
CCGGCGTGAGCCATGCCAGCCACGGCGTCAAACAAGCAGTGTCTGCATTC
ACACCCTCGGCGCCACCACCGCCCACTCTTTCCTCTACCTTGCCATCATC
GACGGAGCCCGTATACGATGGCACTCTAATTGCTGCTGCGGCAGCTGCTT
CTGCTGCTGTAGGTGCTGCCGTTCTACCACACCCTGTCCCCTCCTCCCTC
ACCTCCTCGCGCCCCTCCTCCTCCATGCCTCCTCCCCCGCCCCGACCACC
CTATCAGCTCCAGCAACAGGAAGACCCCTCCTCCCCCCCATCTGCCCTCC
CTCCCTCCCCCTCCTTGATCCATCCCTTGTCTCCGCCTCCTCCTTCCCCT
CCTCCTCCTCCTCCCCCCTCCCCCTTGACGACCCTCCCCCAGGGGAAGGC
TTCCCCTCACTGGCCCGTCGAAAAGAGTTGA back to topCoding sequence (CDS) from alignment at chr2:1481033..1482613- >NO02G05570.1 ID=NO02G05570.1|Name=NO02G05570.1|organism=Nannochloropsis oceanica|type=CDS|length=837bp|location=Sequence derived from alignment at chr2:1481033..1482613- (Nannochloropsis oceanica)
ATGCAGAGCCATCATCACCACCACCATCGCGGCCCCACGGCTACCATGGC
GGCGAGCACCCACGTCGTCACTTTGGCAGGCCCGTCCGCGCAAGACCTGT
CATCCTCGGTGCAGCAAAAGGCAGGGCAAGGGCATATTTTAAGCTGCGGA
AGCAGCAGCATTGGCTGTGGCAATAGCTCCCCAGGTCGAAAGCGCAAGTT
TGAGGAAGGGCCTTTCCCCCAAGCCACCAGTAGCAGCAGCAACAACATCA
GCAACGGCAACGGGAACGCTCCCACGCAACCTTTGTTTCCGACCTCAGCA
CTCAAACCTTTCCTTGTCGACAGCAGCAATAACCATGACAGAAACGGCGG
AAATGGTGGCAGCAGCCATGGCGGAGGAGATGAGGCAGACCGTCCCGGTG
AGTTCTCCGGCGTGAGCCATGCCAGCCACGGCGTCAAACAAGCAGTGTCT
GCATTCACACCCTCGGCGCCACCACCGCCCACTCTTTCCTCTACCTTGCC
ATCATCGACGGAGCCCGTATACGATGGCACTCTAATTGCTGCTGCGGCAG
CTGCTTCTGCTGCTGTAGGTGCTGCCGTTCTACCACACCCTGTCCCCTCC
TCCCTCACCTCCTCGCGCCCCTCCTCCTCCATGCCTCCTCCCCCGCCCCG
ACCACCCTATCAGCTCCAGCAACAGGAAGACCCCTCCTCCCCCCCATCTG
CCCTCCCTCCCTCCCCCTCCTTGATCCATCCCTTGTCTCCGCCTCCTCCT
TCCCCTCCTCCTCCTCCTCCCCCCTCCCCCTTGACGACCCTCCCCCAGGG
GAAGGCTTCCCCTCACTGGCCCGTCGAAAAGAGTTGA back to top
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