NO02G05520.1, NO02G05520.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G05520.1
Unique NameNO02G05520.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5636
Alignment locationchr2:1465114..1470877 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1465114..1470877 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO02G05520.1 vs.
Match: EWM30144.1 (hypothetical protein Naga_100115g2 [Nannochloropsis gaditana])

HSP 1 Score: 518.1 bits (1333), Expect = 5.100e-143
Identity = 275/445 (61.80%), Postives = 339/445 (76.18%), Query Frame = 0
Query:   23 VGAFASALAVGLGFTPLHLFYLHLRGMNRRRNLLACFLENIMAYHLLLLLLRQALYAVPATTRKQQRRQLLVLLVAAAAVFCHASIVAAQVTAVALMGSRMNGDLIYNVVWAVKTDTWGETDAKYFFPFVLSATLAIDMAWLFWGLKLSCGGNGGILDYDEDNAEVKAALKRKAAALGRDCSVKSLCLTFGIVGLLRYGLLWRGYSPVANTVYSLAQYSQMTGPSNLKRS-KLPRRLPLRQAHKRYSYNYTALPDLAAAYAAAAETTRVASSDTHGQQQKKKDKPNVVLIINDSFGNALLKTKKGLKAFPFYEETVQQHRDIFDFTNNRAVSANTLTAATAALLGSYVAAPDPHPDAWTYFDLPNLFTMGKALGYKLALFMPYEHEEWYPFTGIYEDRFDKIVSKNTLNGKAVNDMGMDDRLITAEVLKFLEEEGVKRGRVKQRQ 467
            VG  AS   VGLGFTPLHL YLHLRG  RRRNL AC LEN++AY LL+  +R  L+A PA TR+QQRRQ+L ++ AA  VF HA IVAAQVTA+ALMGSRMNGD IYN+V+AVKT TW ETDAKYFFP +LSATLAIDM WL++ L         +    E N +  A   ++  +  +  +V    L   I+GLLR  + WRGYSPVANT+YSL QYS+M GPS+LKRS K    +P R+AHK Y Y+Y +LP+  A  AA A      S++   Q QK++ K NV+L++++SFGN+LLKT++GL+AFPFYE  VQ+  DI+DFTNNRAVS NTLTAA+AAL+GSYVAAPD HPD WT+FDLPNLFT+GKALGY+L LFMPY+HE+W+PFTGIYEDRFDKIVS++TL  +AVNDMGMDDRL+TAEVLKFLEEEG K+ R ++++
Sbjct:   20 VGRIASVALVGLGFTPLHLLYLHLRGKARRRNLFACLLENVLAYFLLVSSVRHVLHAPPAKTRQQQRRQVLGIISAAILVFAHAFIVAAQVTALALMGSRMNGDFIYNLVYAVKTCTWRETDAKYFFPLMLSATLAIDMVWLWYALLTP----RSVECRTEKNDDTAADKVQEKISARQSSTVNRWYLALSIIGLLRGVVFWRGYSPVANTLYSLVQYSRMKGPSSLKRSQKYGSGIP-RKAHKIYKYDYASLPERVAGNAAEALGR---STNEEAQIQKQRKKTNVILLLSESFGNSLLKTEEGLEAFPFYENVVQRDPDIYDFTNNRAVSGNTLTAASAALVGSYVAAPDLHPDTWTFFDLPNLFTLGKALGYRLVLFMPYDHEDWFPFTGIYEDRFDKIVSRSTLGERAVNDMGMDDRLVTAEVLKFLEEEGAKQRRHREKE 456          
The following BLAST results are available for this feature:
BLAST of NO02G05520.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30144.15.100e-14361.80hypothetical protein Naga_100115g2 [Nannochloropsi... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05520NO02G05520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G05520.1NO02G05520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G05520.1.cds1NO02G05520.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G05520.1 ID=NO02G05520.1|Name=NO02G05520.1|organism=Nannochloropsis oceanica|type=mRNA|length=5636bp
CTTGATCTGTGGATGTGTCCCGCCCTTGGTTCATACTTTGATATAAGGGC
ATCTTTCTTCCCCCTTGTCCTCCTCGTTCAAGACTTGTTTCCACCTCTGG
CCAGGCTGCATTCAGTGCTACGTATGGTCGCTCATCTTTTCCTCCTCTTT
CACTGGCACAAATCTAGCTCCTCACTCTCTTTTTATTTTTTCTTGCCCTT
GAGCGCCTCCGCCGCCTTCTTTGTGGCCGCGGCATCCGCCTTCTGCTTGG
CCTTGAAAGCCAAGTCTTCCTCGGTCATCTCCTTGGCTGCCTTCTTGGGT
GCCTTCAAGGGCTTGGCCTTGCCACCATCGCGACCTGGCTGTGTGGGGTG
CGATGAGTGCGGAGATGGAGGAGAATGGGGCGTGCCGTCGCCGGTCGGTA
GGGACCGGGCTGCGGGGGAGAGGAGAGGGGCCTGGGTATTCTGGCAAATA
TGCAAGAATAGACAGGCGACGTACCATGAGTGAACTTGATCTAGAAATAC
TGCTGCTGGCGGCGGTGCCTGTGGGTGGTGCCCGTGTGGGGTCGTATGGT
GTGAGTGGATGGCGCGTAGACATGGTAGGGGGGAAAGAAAGTGGGTGAGG
GTAGGGTGGAAAGCAAGCGGAGGACTGTGCTGTCATCTCCTGCACCGGGA
AACCTGTAACCCTCATGCAACACGTTACAGGAGCATGGTGGCTTTCATGG
TCTGTGGTCGTGCGCTTTTAAGGACAAGGCTCGTCCGAAGAGCAAGGCGT
CATCATCGCCACAATTTCTCCCTTTCGAGTTGCCGCGCTTCAATAGAGGC
TGTGTTCGCAACCCCTCAAAAAGCTTTTTGAGGGGTTTGGACACCCCCCC
CAAACCCCTCCAACAGCGATTCTTCTCTCCCTTTTCGACCACTATCTTTC
GAGGGGTCTGCAAACCCCTCATACTTTGGTAGCTCGTTTTAAAGGGTCCC
ATCGTAAACCCCTCAAAAAGCAAAATGACCCCTCAAATAGCGAAATCACC
CTTTTTCACCCCAACTACATGATCATTGTGCTTTTCTTTGCATGCACATC
ACTTGAAGTCTACTCTCGTAACCAAAATACGTGTGCGGCCTGACGTTCGA
CCCACGAACGACCACCCAAAGGGTTTTTTAAGTCGCCCTCCTACGCATGA
TAAATGTCCTACTTTGACGTGCCTGCATGCACGTCATTATGACTGCGCAG
CAAATCAAAGGCGCCTCACGTTGTCCTACACTTCGTGTTGCTGTGATTCA
ATGCTGGTGGCGTGGTGGCATAATTTCTGCGTGTGGTATGAAGCGGTGAA
AATGAACCTTCACGTGCTTCTCCCCGCCCTCCCAAAACCCACAGCCACCA
CAGACGTCTTTCCCTTCATCCACCAAACCGCTCTCTTCCCCTGCCGCCCA
TCGAGATGATGGGTATGACAGTGACAGCAGCGAGGCACCGCGTCGGAATA
ATGAAGAGACGCAGGAGTCTCAGACTTCGCTGGCCGCAAGTTCCCTCAGG
GCCGCAAGTTCCCTCAGGGAATGCACCACCACGGAAGGCCGCAGCGGAAA
GGCTCCCGCCTTTATCGATTGTGAGAAGAACTGGTAGATGTACGCGGTCC
TTTGGACACGAATAACCGACACAGTGTGCAATATGGAATCCCCCCCAATT
CCCTTTTTATGCATGGCCGTATCGACTGGTTTGACCCCTTCGACCTCGCT
GACAGAAAGACGACGTTCGATTTACCGGAGCAAGTTCTTGGTAAATCGAT
GCAGCTTCAGGAAATTCTCGTCGGTAAACACGTGGGAGAGCTCCTGCAAC
GTCCCGGGGCGGTATGAGTCTTGATGCCAATGCCCTCGCCGTAGAGGATG
GATGAGTAAAGCTAAAGCAAGGAGCCTCGAAATGCGACGTCGTCTTTCTG
TCAGCCTTTTTATGACTCCTAGGGACAGGCCCAACACGACGAAACTGTAT
GTTTGTTTTGTGCCTTGGTGAGTGACAAGCCGGTGGCGAGGGGCTTTGTA
CATGCAAACAAAGGCGTGGCCAGTGTGTGTTGATTTGAATTGTGGCTTGC
ATTATGGGGCTACGGGTGGTAGGGGGGAACGATGAGCTACTTTGCGTTGC
CCCAAAACATCTGCGGCCGCACGTACATGACCACAGACACATGAAGGACG
ATGTCGGGGCCTATTTCGCTCTAGAGAAAGTCTGTGGGTCTCGGTAATTC
AGTCGCTGGCCGCAAACCGCATCATTGCTAATTGGCAAGGTCGTTCGTTT
GTTGAGCCATGCTCCTGGCAATTTGGCTTCTTAAGCAACACGACGCAGAA
TATGATTTTCAGAAACGAGATGAATAAAGTGTTCGTAGAGGAGATTGATG
CAATCGATGCGACGCGGGCGAAGGTTGCCCGGCGGGGGGTTCTCCGGGAT
TTGCCTGCGAGCGAGCAAGCATTTTGGATTAACGAGTCGCAGACGAGACA
CCGGCCGATGCTCGAGGACTTTCCGGCATATAACTCTGATTACGTAATGA
TTGACAGAATAAGGATATTGGTGGAAAAGTCTCTCTTATATGATTCTTCA
CGGAAGGAAAAAGTACTTTCAGATAGTAACGTAACGGAGACGTGACGGGC
GTGGGAGTGTGACATTAGAGTTAAGTAGTGTGCAAGAGATGGAAGGAATG
AAATAAATGTATGCTAGTGTTTGTTGTTTCTCGCTAGCATCTCTACAAAT
CGACAAGCCCATAATATCAAAGAGCCGTGTGTGCCTTATGGTGTGGGAGC
GTAAGGAACAAAACAACACAGTATCGCCGACGGAGTCACCTCACTTCAAA
GTCCTGCCTCTGCAATAAGAAAGAGGGGGAGGAGCCGAGGGAAACACCCT
CAGCGCAGACACAAACTTCCGCTCGCTTCCCACTGAGTCCAACACCCACG
ATATGCCTCAGGTCCACAAACCACTCATATTTTACCTTCCTGGACCTTGC
ACACATACCCCGGCGTATTTGACAGAGAATGGCGGCAGCGCTGGGGAGGA
GAAGACCACGGCTTGATGGCGCAGCAGCAAGGGGAAAGCGACTCGTTGGA
GCCTTTGCCAGTGCTCTTGCTGTGGGCCTGGGCTTCACGCCTCTGCATCT
TTTTTATCTCCATCTACGCGGCATGAATCGGCGCCGCAATTTGCTGGCGT
GCTTCTTGGAGAACATCATGGCTTATCACCTGCTGCTCCTGCTGCTACGG
CAAGCTCTCTACGCCGTACCCGCCACCACCCGCAAGCAGCAGCGTCGCCA
GCTCCTGGTACTACTCGTGGCCGCGGCGGCCGTCTTTTGCCATGCCTCCA
TTGTGGCGGCCCAGGTAACGGCGGTGGCGCTGATGGGCTCGAGAATGAAC
GGGGACTTGATCTACAATGTGGTGTGGGCCGTTAAGACCGACACATGGGG
AGAGACGGATGCAAAGTATTTTTTCCCTTTTGTCCTCTCCGCCACCTTGG
CCATTGACATGGCCTGGCTCTTCTGGGGTCTTAAACTCTCATGTGGCGGG
AACGGTGGCATACTAGACTATGACGAGGACAATGCAGAGGTCAAGGCCGC
GCTAAAGAGAAAAGCTGCGGCGTTGGGTCGTGACTGTAGTGTGAAATCCT
TGTGCTTGACGTTTGGAATTGTGGGCTTGCTGCGCTACGGCCTGCTGTGG
CGGGGCTATTCACCTGTTGCCAACACGGTTTATTCACTTGCGCAATACAG
TCAAATGACAGGACCCTCTAACTTAAAGCGAAGCAAGCTTCCGAGAAGAT
TGCCACTCAGGCAAGCACACAAGCGATATTCCTACAATTATACAGCCCTC
CCTGATCTCGCTGCTGCATACGCCGCGGCCGCTGAGACCACGCGGGTTGC
CAGCAGCGACACCCACGGACAGCAGCAGAAGAAGAAGGACAAGCCCAATG
TGGTTCTCATTATCAACGACAGCTTTGGTAATGCCTTACTAAAGACCAAG
AAAGGGCTGAAGGCCTTTCCTTTCTATGAGGAAACGGTGCAGCAGCATAG
GGACATATTTGACTTCACTAACAATCGTGCCGTCTCCGCCAACACCCTCA
CGGCCGCTACTGCCGCTCTGCTTGGTTCATACGTGGCTGCACCTGATCCC
CACCCGGACGCGTGGACATATTTTGACTTACCGAATCTTTTTACGATGGG
GAAAGCTCTGGGGTATAAGCTGGCCTTGTTCATGCCTTACGAGCACGAGG
AGTGGTATCCGTTTACGGGCATCTATGAAGATCGTTTTGACAAGATCGTG
AGCAAAAATACGTTGAATGGAAAGGCCGTGAATGATATGGGCATGGACGA
CCGGCTCATTACCGCTGAAGTTCTCAAGTTCCTGGAGGAGGAAGGAGTAA
AGAGAGGGAGGGTAAAGCAGCGGCAAGGTGATGAGAAAGGGAAGTATGCG
AATGGAGGAAAGCAGGCGGAGGAGGAGGAGGTAGCGGATTTGCAGCCATT
TATTGTCGTTATTTTCTGGAACAATATGCATACTCCATTCTTGCAAAATC
CACGATATGAGCGCGCGGGAGATCTCGCCGCAAACCAATCGATGTCAGAA
GCAAGTCCAAGAACAGAGATAGGCGACGAAACAAAGCGTGCCGTCATGAG
GAAGACCTTACTCCCGGGCACTAAGACGGAGACAGTCACGGCTGGTGCTG
CAAATGGTGGTGATAGTGATGCTGGTGCTACTGCTACTGCCGCCACTGCG
GCTGCTACTCCAGGGAGTCAAACGACGACGAGGAAGACAAAGACACTTGT
GTCGCCCGACGTACAGGGGAAGGCAAACTCCTCGATTATAATAAGAGAGG
ACCGCGCCATCCATGCCATGGAAATCGGAAACCAAATGATGCAAGACGTG
TGGGAGACGCTCGAGTCCACTAGCTTGCTCGACAACACCCTCGTCTCCTT
CCAGAGCGACCACGGGGAGACAATGGGCACCGCGGTCCGCAAGCGTTTGG
CAGACCCTGATTCTCTCTATCTCGCCACGCCGCTCTGGATGCACATCCCT
CCGCACTTGCTATCGTCGTCAGAGCGTGAGGTACTGTCAGAAAATCGAGA
CAAACTGACGTCCAACATGGATTTGATGCCTACCTTTGTGGAGGTCTTGA
AATGGGACACGACGGAAAACATGTTCAGGGAAAGACCATCCATTTTCAAG
CATGGCAGATCGTTGCTTCGCCCAGTGGAGGCAGATCGGTTGACGTCTGG
CTGGCAGGGACGGCCTTTTGTCGAGAGCTGCGATTGGACCCATGGTTTTC
TTTTTAATGCCACGCACACGCTCATTCTGCGGGCGGGGGAAAACCATGCC
GTGCTGGAGGCGATTGACCAGGAAGACGGGGCCTGGACGACGGTGAAGGA
ACGATGGGCGGTGAAGGACTTGCCGGCAGAGGAGGTGGCGTGGTGGACAC
GGGAGCTGAAGACGAATCATGCGGATATGGTAATGGCGTTGACGGAGTGC
TTTTGGAATTATTTGTAAGGACGGCTAATCTGGATTGTAGACATATCTGG
ATACTACCAGGTAGATAGATTGGATGTACCGGTAAACAGTACGTATTGCA
CGGCACGCTAGGAGCAAAGTATTTTACTATCAAGAGATGGATTTGAAGAC
AAACGAAAAGCAAGTAACGGAGTGTAGATGGCATCA
back to top

protein sequence of NO02G05520.1

>NO02G05520.1-protein ID=NO02G05520.1-protein|Name=NO02G05520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=830bp
MAAALGRRRPRLDGAAARGKRLVGAFASALAVGLGFTPLHLFYLHLRGMN
RRRNLLACFLENIMAYHLLLLLLRQALYAVPATTRKQQRRQLLVLLVAAA
AVFCHASIVAAQVTAVALMGSRMNGDLIYNVVWAVKTDTWGETDAKYFFP
FVLSATLAIDMAWLFWGLKLSCGGNGGILDYDEDNAEVKAALKRKAAALG
RDCSVKSLCLTFGIVGLLRYGLLWRGYSPVANTVYSLAQYSQMTGPSNLK
RSKLPRRLPLRQAHKRYSYNYTALPDLAAAYAAAAETTRVASSDTHGQQQ
KKKDKPNVVLIINDSFGNALLKTKKGLKAFPFYEETVQQHRDIFDFTNNR
AVSANTLTAATAALLGSYVAAPDPHPDAWTYFDLPNLFTMGKALGYKLAL
FMPYEHEEWYPFTGIYEDRFDKIVSKNTLNGKAVNDMGMDDRLITAEVLK
FLEEEGVKRGRVKQRQGDEKGKYANGGKQAEEEEVADLQPFIVVIFWNNM
HTPFLQNPRYERAGDLAANQSMSEASPRTEIGDETKRAVMRKTLLPGTKT
ETVTAGAANGGDSDAGATATAATAAATPGSQTTTRKTKTLVSPDVQGKAN
SSIIIREDRAIHAMEIGNQMMQDVWETLESTSLLDNTLVSFQSDHGETMG
TAVRKRLADPDSLYLATPLWMHIPPHLLSSSEREVLSENRDKLTSNMDLM
PTFVEVLKWDTTENMFRERPSIFKHGRSLLRPVEADRLTSGWQGRPFVES
CDWTHGFLFNATHTLILRAGENHAVLEAIDQEDGAWTTVKERWAVKDLPA
EEVAWWTRELKTNHADMVMALTECFWNYL*
back to top

mRNA from alignment at chr2:1465114..1470877+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G05520.1 ID=NO02G05520.1|Name=NO02G05520.1|organism=Nannochloropsis oceanica|type=mRNA|length=5764bp|location=Sequence derived from alignment at chr2:1465114..1470877+ (Nannochloropsis oceanica)
CTTGATCTGTGGATGTGTCCCGCCCTTGGTTCATACTTTGATATAAGGGC ATCTTTCTTCCCCCTTGTCCTCCTCGTTCAAGACTTGTTTCCACCTCTGG CCAGGCTGCATTCAGTGCTACGTATGGTCGCTCATCTTTTCCTCCTCTTT CACTGGCACAAATCTAGCTCCTCACTCTCTTTTTATTTTTTCTTGCCCTT GAGCGCCTCCGCCGCCTTCTTTGTGGCCGCGGCATCCGCCTTCTGCTTGG CCTTGAAAGCCAAGTCTTCCTCGGTCATCTCCTTGGCTGCCTTCTTGGGT GCCTTCAAGGGCTTGGCCTTGCCACCATCGCGACCTGGCTGTGTGGGGTG CGATGAGTGCGGAGATGGAGGAGAATGGGGCGTGCCGTCGCCGGTCGGTA GGGACCGGGCTGCGGGGGAGAGGAGAGGGGCCTGGGTATTCTGGCAAATA TGCAAGAATAGACAGGCGACGTACCATGAGTGAACTTGATCTAGAAATAC TGCTGCTGGCGGCGGTGCCTGTGGGTGGTGCCCGTGTGGGGTCGTATGGT GTGAGTGGATGGCGCGTAGACATGGTAGGGGGGAAAGAAAGTGGGTGAGG GTAGGGTGGAAAGCAAGCGGAGGACTGTGCTGTCATCTCCTGCACCGGGA AACCTGTAACCCTCATGCAACACGTTACAGGAGCATGGTGGCTTTCATGG TCTGTGGTCGTGCGCTTTTAAGGACAAGGCTCGTCCGAAGAGCAAGGCGT CATCATCGCCACAATTTCTCCCTTTCGAGTTGCCGCGCTTCAATAGAGGC TGTGTTCGCAACCCCTCAAAAAGCTTTTTGAGGGGTTTGGACACCCCCCC CAAACCCCTCCAACAGCGATTCTTCTCTCCCTTTTCGACCACTATCTTTC GAGGGGTCTGCAAACCCCTCATACTTTGGTAGCTCGTTTTAAAGGGTCCC ATCGTAAACCCCTCAAAAAGCAAAATGACCCCTCAAATAGCGAAATCACC CTTTTTCACCCCAACTACATGATCATTGTGCTTTTCTTTGCATGCACATC ACTTGAAGTCTACTCTCGTAACCAAAATACGTGTGCGGCCTGACGTTCGA CCCACGAACGACCACCCAAAGGGTTTTTTAAGTCGCCCTCCTACGCATGA TAAATGTCCTACTTTGACGTGCCTGCATGCACGTCATTATGACTGCGCAG CAAATCAAAGGCGCCTCACGTTGTCCTACACTTCGTGTTGCTGTGATTCA ATGCTGGTGGCGTGGTGGCATAATTTCTGCGTGTGGTATGAAGCGGTGAA AATGAACCTTCACGTGCTTCTCCCCGCCCTCCCAAAACCCACAGCCACCA CAGACGTCTTTCCCTTCATCCACCAAACCGCTCTCTTCCCCTGCCGCCCA TCGAGATGATGGGTATGACAGTGACAGCAGCGAGGCACCGCGTCGGAATA ATGAAGAGACGCAGGAGTCTCAGACTTCGCTGGCCGCAAGTTCCCTCAGG GCCGCAAGTTCCCTCAGGGAATGCACCACCACGGAAGGCCGCAGCGGAAA GGCTCCCGCCTTTATCGATTGTGAGAAGAACTGGTAGATGTACGCGGTCC TTTGGACACGAATAAGTGAGCGCGCGGGTGGGCGGGTGGGTGGATGATTA GTGTGGTTGGGTGCGGAGGGCGTATGGGTGGATGTGTCTACACATTGGTT CCTCCACCTCACACACTCACCCCCTTTTCATCCACCACACCAGCCGACAC AGTGTGCAATATGGAATCCCCCCCAATTCCCTTTTTATGCATGGCCGTAT CGACTGGTTTGACCCCTTCGACCTCGCTGACAGAAAGACGACGTTCGATT TACCGGAGCAAGTTCTTGGTAAATCGATGCAGCTTCAGGAAATTCTCGTC GGTAAACACGTGGGAGAGCTCCTGCAACGTCCCGGGGCGGTATGAGTCTT GATGCCAATGCCCTCGCCGTAGAGGATGGATGAGTAAAGCTAAAGCAAGG AGCCTCGAAATGCGACGTCGTCTTTCTGTCAGCCTTTTTATGACTCCTAG GGACAGGCCCAACACGACGAAACTGTATGTTTGTTTTGTGCCTTGGTGAG TGACAAGCCGGTGGCGAGGGGCTTTGTACATGCAAACAAAGGCGTGGCCA GTGTGTGTTGATTTGAATTGTGGCTTGCATTATGGGGCTACGGGTGGTAG GGGGGAACGATGAGCTACTTTGCGTTGCCCCAAAACATCTGCGGCCGCAC GTACATGACCACAGACACATGAAGGACGATGTCGGGGCCTATTTCGCTCT AGAGAAAGTCTGTGGGTCTCGGTAATTCAGTCGCTGGCCGCAAACCGCAT CATTGCTAATTGGCAAGGTCGTTCGTTTGTTGAGCCATGCTCCTGGCAAT TTGGCTTCTTAAGCAACACGACGCAGAATATGATTTTCAGAAACGAGATG AATAAAGTGTTCGTAGAGGAGATTGATGCAATCGATGCGACGCGGGCGAA GGTTGCCCGGCGGGGGGTTCTCCGGGATTTGCCTGCGAGCGAGCAAGCAT TTTGGATTAACGAGTCGCAGACGAGACACCGGCCGATGCTCGAGGACTTT CCGGCATATAACTCTGATTACGTAATGATTGACAGAATAAGGATATTGGT GGAAAAGTCTCTCTTATATGATTCTTCACGGAAGGAAAAAGTACTTTCAG ATAGTAACGTAACGGAGACGTGACGGGCGTGGGAGTGTGACATTAGAGTT AAGTAGTGTGCAAGAGATGGAAGGAATGAAATAAATGTATGCTAGTGTTT GTTGTTTCTCGCTAGCATCTCTACAAATCGACAAGCCCATAATATCAAAG AGCCGTGTGTGCCTTATGGTGTGGGAGCGTAAGGAACAAAACAACACAGT ATCGCCGACGGAGTCACCTCACTTCAAAGTCCTGCCTCTGCAATAAGAAA GAGGGGGAGGAGCCGAGGGAAACACCCTCAGCGCAGACACAAACTTCCGC TCGCTTCCCACTGAGTCCAACACCCACGATATGCCTCAGGTCCACAAACC ACTCATATTTTACCTTCCTGGACCTTGCACACATACCCCGGCGTATTTGA CAGAGAATGGCGGCAGCGCTGGGGAGGAGAAGACCACGGCTTGATGGCGC AGCAGCAAGGGGAAAGCGACTCGTTGGAGCCTTTGCCAGTGCTCTTGCTG TGGGCCTGGGCTTCACGCCTCTGCATCTTTTTTATCTCCATCTACGCGGC ATGAATCGGCGCCGCAATTTGCTGGCGTGCTTCTTGGAGAACATCATGGC TTATCACCTGCTGCTCCTGCTGCTACGGCAAGCTCTCTACGCCGTACCCG CCACCACCCGCAAGCAGCAGCGTCGCCAGCTCCTGGTACTACTCGTGGCC GCGGCGGCCGTCTTTTGCCATGCCTCCATTGTGGCGGCCCAGGTAACGGC GGTGGCGCTGATGGGCTCGAGAATGAACGGGGACTTGATCTACAATGTGG TGTGGGCCGTTAAGACCGACACATGGGGAGAGACGGATGCAAAGTATTTT TTCCCTTTTGTCCTCTCCGCCACCTTGGCCATTGACATGGCCTGGCTCTT CTGGGGTCTTAAACTCTCATGTGGCGGGAACGGTGGCATACTAGACTATG ACGAGGACAATGCAGAGGTCAAGGCCGCGCTAAAGAGAAAAGCTGCGGCG TTGGGTCGTGACTGTAGTGTGAAATCCTTGTGCTTGACGTTTGGAATTGT GGGCTTGCTGCGCTACGGCCTGCTGTGGCGGGGCTATTCACCTGTTGCCA ACACGGTTTATTCACTTGCGCAATACAGTCAAATGACAGGACCCTCTAAC TTAAAGCGAAGCAAGCTTCCGAGAAGATTGCCACTCAGGCAAGCACACAA GCGATATTCCTACAATTATACAGCCCTCCCTGATCTCGCTGCTGCATACG CCGCGGCCGCTGAGACCACGCGGGTTGCCAGCAGCGACACCCACGGACAG CAGCAGAAGAAGAAGGACAAGCCCAATGTGGTTCTCATTATCAACGACAG CTTTGGTAATGCCTTACTAAAGACCAAGAAAGGGCTGAAGGCCTTTCCTT TCTATGAGGAAACGGTGCAGCAGCATAGGGACATATTTGACTTCACTAAC AATCGTGCCGTCTCCGCCAACACCCTCACGGCCGCTACTGCCGCTCTGCT TGGTTCATACGTGGCTGCACCTGATCCCCACCCGGACGCGTGGACATATT TTGACTTACCGAATCTTTTTACGATGGGGAAAGCTCTGGGGTATAAGCTG GCCTTGTTCATGCCTTACGAGCACGAGGAGTGGTATCCGTTTACGGGCAT CTATGAAGATCGTTTTGACAAGATCGTGAGCAAAAATACGTTGAATGGAA AGGCCGTGAATGATATGGGCATGGACGACCGGCTCATTACCGCTGAAGTT CTCAAGTTCCTGGAGGAGGAAGGAGTAAAGAGAGGGAGGGTAAAGCAGCG GCAAGGTGATGAGAAAGGGAAGTATGCGAATGGAGGAAAGCAGGCGGAGG AGGAGGAGGTAGCGGATTTGCAGCCATTTATTGTCGTTATTTTCTGGAAC AATATGCATACTCCATTCTTGCAAAATCCACGATATGAGCGCGCGGGAGA TCTCGCCGCAAACCAATCGATGTCAGAAGCAAGTCCAAGAACAGAGATAG GCGACGAAACAAAGCGTGCCGTCATGAGGAAGACCTTACTCCCGGGCACT AAGACGGAGACAGTCACGGCTGGTGCTGCAAATGGTGGTGATAGTGATGC TGGTGCTACTGCTACTGCCGCCACTGCGGCTGCTACTCCAGGGAGTCAAA CGACGACGAGGAAGACAAAGACACTTGTGTCGCCCGACGTACAGGGGAAG GCAAACTCCTCGATTATAATAAGAGAGGACCGCGCCATCCATGCCATGGA AATCGGAAACCAAATGATGCAAGACGTGTGGGAGACGCTCGAGTCCACTA GCTTGCTCGACAACACCCTCGTCTCCTTCCAGAGCGACCACGGGGAGACA ATGGGCACCGCGGTCCGCAAGCGTTTGGCAGACCCTGATTCTCTCTATCT CGCCACGCCGCTCTGGATGCACATCCCTCCGCACTTGCTATCGTCGTCAG AGCGTGAGGTACTGTCAGAAAATCGAGACAAACTGACGTCCAACATGGAT TTGATGCCTACCTTTGTGGAGGTCTTGAAATGGGACACGACGGAAAACAT GTTCAGGGAAAGACCATCCATTTTCAAGCATGGCAGATCGTTGCTTCGCC CAGTGGAGGCAGATCGGTTGACGTCTGGCTGGCAGGGACGGCCTTTTGTC GAGAGCTGCGATTGGACCCATGGTTTTCTTTTTAATGCCACGCACACGCT CATTCTGCGGGCGGGGGAAAACCATGCCGTGCTGGAGGCGATTGACCAGG AAGACGGGGCCTGGACGACGGTGAAGGAACGATGGGCGGTGAAGGACTTG CCGGCAGAGGAGGTGGCGTGGTGGACACGGGAGCTGAAGACGAATCATGC GGATATGGTAATGGCGTTGACGGAGTGCTTTTGGAATTATTTGTAAGGAC GGCTAATCTGGATTGTAGACATATCTGGATACTACCAGGTAGATAGATTG GATGTACCGGTAAACAGTACGTATTGCACGGCACGCTAGGAGCAAAGTAT TTTACTATCAAGAGATGGATTTGAAGACAAACGAAAAGCAAGTAACGGAG TGTAGATGGCATCA
back to top

Coding sequence (CDS) from alignment at chr2:1465114..1470877+

>NO02G05520.1 ID=NO02G05520.1|Name=NO02G05520.1|organism=Nannochloropsis oceanica|type=CDS|length=2490bp|location=Sequence derived from alignment at chr2:1465114..1470877+ (Nannochloropsis oceanica)
ATGGCGGCAGCGCTGGGGAGGAGAAGACCACGGCTTGATGGCGCAGCAGC
AAGGGGAAAGCGACTCGTTGGAGCCTTTGCCAGTGCTCTTGCTGTGGGCC
TGGGCTTCACGCCTCTGCATCTTTTTTATCTCCATCTACGCGGCATGAAT
CGGCGCCGCAATTTGCTGGCGTGCTTCTTGGAGAACATCATGGCTTATCA
CCTGCTGCTCCTGCTGCTACGGCAAGCTCTCTACGCCGTACCCGCCACCA
CCCGCAAGCAGCAGCGTCGCCAGCTCCTGGTACTACTCGTGGCCGCGGCG
GCCGTCTTTTGCCATGCCTCCATTGTGGCGGCCCAGGTAACGGCGGTGGC
GCTGATGGGCTCGAGAATGAACGGGGACTTGATCTACAATGTGGTGTGGG
CCGTTAAGACCGACACATGGGGAGAGACGGATGCAAAGTATTTTTTCCCT
TTTGTCCTCTCCGCCACCTTGGCCATTGACATGGCCTGGCTCTTCTGGGG
TCTTAAACTCTCATGTGGCGGGAACGGTGGCATACTAGACTATGACGAGG
ACAATGCAGAGGTCAAGGCCGCGCTAAAGAGAAAAGCTGCGGCGTTGGGT
CGTGACTGTAGTGTGAAATCCTTGTGCTTGACGTTTGGAATTGTGGGCTT
GCTGCGCTACGGCCTGCTGTGGCGGGGCTATTCACCTGTTGCCAACACGG
TTTATTCACTTGCGCAATACAGTCAAATGACAGGACCCTCTAACTTAAAG
CGAAGCAAGCTTCCGAGAAGATTGCCACTCAGGCAAGCACACAAGCGATA
TTCCTACAATTATACAGCCCTCCCTGATCTCGCTGCTGCATACGCCGCGG
CCGCTGAGACCACGCGGGTTGCCAGCAGCGACACCCACGGACAGCAGCAG
AAGAAGAAGGACAAGCCCAATGTGGTTCTCATTATCAACGACAGCTTTGG
TAATGCCTTACTAAAGACCAAGAAAGGGCTGAAGGCCTTTCCTTTCTATG
AGGAAACGGTGCAGCAGCATAGGGACATATTTGACTTCACTAACAATCGT
GCCGTCTCCGCCAACACCCTCACGGCCGCTACTGCCGCTCTGCTTGGTTC
ATACGTGGCTGCACCTGATCCCCACCCGGACGCGTGGACATATTTTGACT
TACCGAATCTTTTTACGATGGGGAAAGCTCTGGGGTATAAGCTGGCCTTG
TTCATGCCTTACGAGCACGAGGAGTGGTATCCGTTTACGGGCATCTATGA
AGATCGTTTTGACAAGATCGTGAGCAAAAATACGTTGAATGGAAAGGCCG
TGAATGATATGGGCATGGACGACCGGCTCATTACCGCTGAAGTTCTCAAG
TTCCTGGAGGAGGAAGGAGTAAAGAGAGGGAGGGTAAAGCAGCGGCAAGG
TGATGAGAAAGGGAAGTATGCGAATGGAGGAAAGCAGGCGGAGGAGGAGG
AGGTAGCGGATTTGCAGCCATTTATTGTCGTTATTTTCTGGAACAATATG
CATACTCCATTCTTGCAAAATCCACGATATGAGCGCGCGGGAGATCTCGC
CGCAAACCAATCGATGTCAGAAGCAAGTCCAAGAACAGAGATAGGCGACG
AAACAAAGCGTGCCGTCATGAGGAAGACCTTACTCCCGGGCACTAAGACG
GAGACAGTCACGGCTGGTGCTGCAAATGGTGGTGATAGTGATGCTGGTGC
TACTGCTACTGCCGCCACTGCGGCTGCTACTCCAGGGAGTCAAACGACGA
CGAGGAAGACAAAGACACTTGTGTCGCCCGACGTACAGGGGAAGGCAAAC
TCCTCGATTATAATAAGAGAGGACCGCGCCATCCATGCCATGGAAATCGG
AAACCAAATGATGCAAGACGTGTGGGAGACGCTCGAGTCCACTAGCTTGC
TCGACAACACCCTCGTCTCCTTCCAGAGCGACCACGGGGAGACAATGGGC
ACCGCGGTCCGCAAGCGTTTGGCAGACCCTGATTCTCTCTATCTCGCCAC
GCCGCTCTGGATGCACATCCCTCCGCACTTGCTATCGTCGTCAGAGCGTG
AGGTACTGTCAGAAAATCGAGACAAACTGACGTCCAACATGGATTTGATG
CCTACCTTTGTGGAGGTCTTGAAATGGGACACGACGGAAAACATGTTCAG
GGAAAGACCATCCATTTTCAAGCATGGCAGATCGTTGCTTCGCCCAGTGG
AGGCAGATCGGTTGACGTCTGGCTGGCAGGGACGGCCTTTTGTCGAGAGC
TGCGATTGGACCCATGGTTTTCTTTTTAATGCCACGCACACGCTCATTCT
GCGGGCGGGGGAAAACCATGCCGTGCTGGAGGCGATTGACCAGGAAGACG
GGGCCTGGACGACGGTGAAGGAACGATGGGCGGTGAAGGACTTGCCGGCA
GAGGAGGTGGCGTGGTGGACACGGGAGCTGAAGACGAATCATGCGGATAT
GGTAATGGCGTTGACGGAGTGCTTTTGGAATTATTTGTAA
back to top
Synonyms
Publications