|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr2 | genome | chr2:1397848..1401242 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G05230.1 ID=NO02G05230.1|Name=NO02G05230.1|organism=Nannochloropsis oceanica|type=mRNA|length=2916bp ATGCGGCTGTGTCGAAGAAGACCCAGGAGTGAAGGAGGAGGACGCGCCTC AGCAACCGCACCTCTTTTTCTCCTCGCCCTCCTTCTTCCGGACCACGCCT GTGCTTTCTTCACCGCCAGTCAACGTCGCCACAACACTCCGCATGAGAGT AGCCATCTCTCACCATATTCCTCTTCTTCCTCTTCTTCCACTTCCTCTTC CGATTTCACTACTCCGTCTTCGTCTTCAATCCCCACTCACCTCCGCGCTT CCCCCTCTCCTTCCTCCTCTTCCTCCTCTCCCTCTTCGCCTTCCTCTACC TCTCCCTCCTCAACCAACCACCACCACAAGCTCCTAAATCACGCCCTGGA GAATCAATCGACCTACCAAGACCTCCTCCTCCTCATCGCCTCGGACGTCA ACAATTTCAACAGCATTAATTGCGCAACCGCCCTCTCACGCCTCTCGCGA TTGGCTTTCCAAGAACATCGGCGGCCGCACACCATCACGGCAGACCCGAC TGTCCGGGCTCTACTGAGCCAAGTCGAGACGCAAATAGAGAGCAGTGGCC CGGGGCAACAAAATCAATTTTTGTCATCCTTGGCCCGGATGGGGGTCGTG CCCGAGGGGGAGCTGCTCCGGAGACTACAGGAGAAGATAGAGGAAGATGT GGAGGGGTATCGGGCGGTGGAACTTGCAGGGCTGCTGAATGCCATGGCTC GTCTCTCTTCCCCGTCCTCCTTCGCCTCCTCGTCCTCGTTCCCCCCATCG GACTCATCATTCTCCTCCTTCTCGTCCTCCTCCTCCTCCTCGGGGAGCAG TGGGGGGCCGGAAGGAAGAAGAGGAGGAGGAGGAGGAGGCAAGGATGGTG CACTGTTGAGCAATCTTTACTGCTCCCTGGTCAAGCTTCTCAACCGCTCT CCGGGGCCCGCAGTCACACGACCTTTCCTTCGTCGCCTTCTCGCCCTGGA GAGAGGGAGGAAGGGGAAGGGAGGAGAGGGGTTGGAAAAGGGCTTGCGAG TGTTGGACTCGCATTGGCTCGCGCAGGTGCTCAATGTGTTGGGGAGGGCG GCGGGACAAGACGAAGAAGAGGAGGAGGAAGGGAGGGAGGATAAGGGCGA CAGCGACAGCAGCATTGACCTGGTCTTCCTCCTCGCGGCACAAGACGAAG TCCTTCGACGCCTCAATCACCTCCCCCCCCTCGATCTAGCGATGTGTGCG TCGGCACTAGGCAAGCTCCATCCTCTCCCCGGGCCCTTCTTTTACCTTGC CCTCTGCAACCACGTTTCCAAACGCCTTTCCTCTTCCCCTCCCTCCTCCT CATCCTCCACCTTCTCCTCCAATTTCCCCACCCCCTTCTCCTCCTCCTCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCACCCAGACCCT CGCCCTCCTCACCAACGGTCTTGGTAACCTCCAACACACCTCCTCCTCCC CCTTACCCTCCTCCTCCCTCTTCTCCTCCCTCCTCCTTGATCACATCCAG CCCCGCCTCCCCTCCTTCCGTCCCTCCGAGCTCGCCAACGTCCTTGGAGG CCTGGGCAAGCTCCGTGCCTCCCCCTCCCCCTCCTTCCTCTCCCTTGCCA CAGACCTCCTCATCAAACAGGCCGACGCCTTCACCCCGTCGGAGATGGCT AGTGCCGTGTTTGGCCTGGTGAAAATGAAGGCCAAATGGAGCAAGGAATT GCGGAGCGCAGTGCAGGGGTGGGGGGATAGGACGATGAGAAAGGTGGAAA GGATGGTGGTGGAGGGAGGGAGGGAGGGAGGGAGGAGGACGGCCGTGGTG GTCGCGCGGGAGGTCGGGCATGTATTGAACACATTTATCCGTCTCGGTCT CCAGCCTGATGAAGATCTCCTCATGCGCGCCCAAGCCCTTTTCCTTCAAC CCACCCATTCCTACCCCGTGTCCCCGCCCGCCCTCCCTCCCTCCCTCATC CTCCACCACGCCCCCCTCCGTAGCCTTGCCATGGTCCTTGTTGCTTTTGC TCGTTTTAAATATCATCCCGGACAGGCCTTTCTCCTCCACGCCGCCAACA CAGGCTTCAAAGCGACAGATGGAGGAGGAGGAGGAGGACGAGGACGAGGA GGAGGACGAGGAGGAGGAAGGGGGGGAAGCGCTTTGCACACAGCCTTATT CCTGAGCGCGTTGAGCCGACTGGGGCACGAGCCAACAAGGACGCAGGTGG ATATTGCCTTTGGGATGCTGGCCTCTAACGTAGGGGAATTAGGCGATAAA TGTTTGTTTAACACGATGTACGCCCTTGGTAAATGGGAGCCCTCTTTGAG GGAGGGCGGGAAGGGGGGCGGGGCTGAAGGAGGGAGGGAGGGAGAAGGAG GGAGAGGGAGGAAAGCATTTTTGAAGGTGTGGGAGGAAGAGAGGGCTTGG GAGTGGTTGAGGGGCTTGGCGGTGTCGCAGTTGGTGGTGACTGCGTGGAG TTTGAAGGCGTTGGGGTACTGGTGCGCATCTCCGACGGTGGCACGTGCGT TCAAGGAGGCGGTGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAAGGGAA GAAGGTGGGGCCGATTTGACGGATACGGAGGCGGCGTCATTGTTGCATTC ATTGCGGTGCATTGGGGTGGATGTAAGTGAGTACCCTCCCCTAGTTCTGC TCAAGGGAGAAAGAGGCGGACTTTCCTCTCTCCCCTCTTCTCCTATTTCT TCCTCTTCCTCATCTTCCTCCTCTTTAAAAGAGGGTCTAGGAGGAGGTGG AAGGCCCTCCTCGCCCGTAATGTTACTCACGCGAGAAAGAGCTCGACAGC AGGTACGAGTCAAAATCCCCATTTTCCCTTCAGGGGAGGACGTTGCCGGT GCGGAGGATGAAGGGAGAAAGAGAGCGGAAAAGGAGGAAGGAGAGGAGAA AGAGGAACAGGAATAG back to topprotein sequence of NO02G05230.1 >NO02G05230.1-protein ID=NO02G05230.1-protein|Name=NO02G05230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=972bp MRLCRRRPRSEGGGRASATAPLFLLALLLPDHACAFFTASQRRHNTPHES SHLSPYSSSSSSSTSSSDFTTPSSSSIPTHLRASPSPSSSSSSPSSPSST SPSSTNHHHKLLNHALENQSTYQDLLLLIASDVNNFNSINCATALSRLSR LAFQEHRRPHTITADPTVRALLSQVETQIESSGPGQQNQFLSSLARMGVV PEGELLRRLQEKIEEDVEGYRAVELAGLLNAMARLSSPSSFASSSSFPPS DSSFSSFSSSSSSSGSSGGPEGRRGGGGGGKDGALLSNLYCSLVKLLNRS PGPAVTRPFLRRLLALERGRKGKGGEGLEKGLRVLDSHWLAQVLNVLGRA AGQDEEEEEEGREDKGDSDSSIDLVFLLAAQDEVLRRLNHLPPLDLAMCA SALGKLHPLPGPFFYLALCNHVSKRLSSSPPSSSSSTFSSNFPTPFSSSS SSSSSSSSSSSFSTQTLALLTNGLGNLQHTSSSPLPSSSLFSSLLLDHIQ PRLPSFRPSELANVLGGLGKLRASPSPSFLSLATDLLIKQADAFTPSEMA SAVFGLVKMKAKWSKELRSAVQGWGDRTMRKVERMVVEGGREGGRRTAVV VAREVGHVLNTFIRLGLQPDEDLLMRAQALFLQPTHSYPVSPPALPPSLI LHHAPLRSLAMVLVAFARFKYHPGQAFLLHAANTGFKATDGGGGGGRGRG GGRGGGRGGSALHTALFLSALSRLGHEPTRTQVDIAFGMLASNVGELGDK CLFNTMYALGKWEPSLREGGKGGGAEGGREGEGGRGRKAFLKVWEEERAW EWLRGLAVSQLVVTAWSLKALGYWCASPTVARAFKEAVEGGREGGRERRE EGGADLTDTEAASLLHSLRCIGVDVSEYPPLVLLKGERGGLSSLPSSPIS SSSSSSSSLKEGLGGGGRPSSPVMLLTRERARQQVRVKIPIFPSGEDVAG AEDEGRKRAEKEEGEEKEEQE* back to topmRNA from alignment at chr2:1397848..1401242+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G05230.1 ID=NO02G05230.1|Name=NO02G05230.1|organism=Nannochloropsis oceanica|type=mRNA|length=3395bp|location=Sequence derived from alignment at chr2:1397848..1401242+ (Nannochloropsis oceanica) ATGCGGCTGTGTCGAAGAAGACCCAGGAGTGAAGGAGGAGGACGCGCCTC
AGGTACGTTCGTGTTGTTATCGACCTATGCGCACACCTCACGCTATTCTC
AGACCAAATACGAGCCGCTTTGACGGACTTGCGCCTGCTTCTTAAGATAG
GTCGGTCATGTGTTTTTGCCCCCTACGACTTCTTTGTCCTACTTCCTTGC
TTGCGTCTTTTCCGTCCTCCACACTTGACCGACGGTTGCAAAGTCACTTC
TCCGAAAGCGGATGCTGATTTGCCTAGATCGCTCCCCGTCCTGTCCCACC
TTGACGCTCACAGATTCTTTTCCCCCTTTCCTGTCATGCCCTTTACTCCA
AATAGCAACCGCACCTCTTTTTCTCCTCGCCCTCCTTCTTCCGGACCACG
CCTGTGCTTTCTTCACCGCCAGTCAACGTCGCCACAACACTCCGCATGAG
AGTAGCCATCTCTCACCATATTCCTCTTCTTCCTCTTCTTCCACTTCCTC
TTCCGATTTCACTACTCCGTCTTCGTCTTCAATCCCCACTCACCTCCGCG
CTTCCCCCTCTCCTTCCTCCTCTTCCTCCTCTCCCTCTTCGCCTTCCTCT
ACCTCTCCCTCCTCAACCAACCACCACCACAAGCTCCTAAATCACGCCCT
GGAGAATCAATCGACCTACCAAGACCTCCTCCTCCTCATCGCCTCGGACG
TCAACAATTTCAACAGCATTAATTGCGCAACCGCCCTCTCACGCCTCTCG
CGATTGGCTTTCCAAGAACATCGGCGGCCGCACACCATCACGGCAGACCC
GACTGTCCGGGCTCTACTGAGCCAAGTCGAGACGCAAATAGAGAGCAGTG
GCCCGGGGCAACAAAATCAATTTTTGTCATCCTTGGCCCGGATGGGGGTC
GTGCCCGAGGGGGAGCTGCTCCGGAGACTACAGGAGAAGATAGAGGAAGA
TGTGGAGGGGTATCGGGCGGTGGAACTTGCAGGGCTGCTGAATGCCATGG
CTCGTCTCTCTTCCCCGTCCTCCTTCGCCTCCTCGTCCTCGTTCCCCCCA
TCGGACTCATCATTCTCCTCCTTCTCGTCCTCCTCCTCCTCCTCGGGGAG
CAGTGGGGTGAGCTGGCCCCGCCCCCTCCTTCGTCGCCTCACCCAGCAAG
CCTGCATCGTGCTTGCAAATCCCTCCCCCCGTCCCTCCTCTCCCTCCTCC
TCCCCCCCCCCCTCTTCACCCTCCATCACCTCCTCCTCTCTCTCCTCCCC
CCCTCCTCCTCTTCACCCTCCATCACCAACAAGGGGCCGGAAGGAAGAAG
AGGAGGAGGAGGAGGAGGCAAGGATGGTGCACTGTTGAGCAATCTTTACT
GCTCCCTGGTCAAGCTTCTCAACCGCTCTCCGGGGCCCGCAGTCACACGA
CCTTTCCTTCGTCGCCTTCTCGCCCTGGAGAGAGGGAGGAAGGGGAAGGG
AGGAGAGGGGTTGGAAAAGGGCTTGCGAGTGTTGGACTCGCATTGGCTCG
CGCAGGTGCTCAATGTGTTGGGGAGGGCGGCGGGACAAGACGAAGAAGAG
GAGGAGGAAGGGAGGGAGGATAAGGGCGACAGCGACAGCAGCATTGACCT
GGTCTTCCTCCTCGCGGCACAAGACGAAGTCCTTCGACGCCTCAATCACC
TCCCCCCCCTCGATCTAGCGATGTGTGCGTCGGCACTAGGCAAGCTCCAT
CCTCTCCCCGGGCCCTTCTTTTACCTTGCCCTCTGCAACCACGTTTCCAA
ACGCCTTTCCTCTTCCCCTCCCTCCTCCTCATCCTCCACCTTCTCCTCCA
ATTTCCCCACCCCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTTCTCCACCCAGACCCTCGCCCTCCTCACCAACGGTCT
TGGTAACCTCCAACACACCTCCTCCTCCCCCTTACCCTCCTCCTCCCTCT
TCTCCTCCCTCCTCCTTGATCACATCCAGCCCCGCCTCCCCTCCTTCCGT
CCCTCCGAGCTCGCCAACGTCCTTGGAGGCCTGGGCAAGCTCCGTGCCTC
CCCCTCCCCCTCCTTCCTCTCCCTTGCCACAGACCTCCTCATCAAACAGG
CCGACGCCTTCACCCCGTCGGAGATGGCTAGTGCCGTGTTTGGCCTGGTG
AAAATGAAGGCCAAATGGAGCAAGGAATTGCGGAGCGCAGTGCAGGGGTG
GGGGGATAGGACGATGAGAAAGGTGGAAAGGATGGTGGTGGAGGGAGGGA
GGGAGGGAGGGAGGAGGACGGCCGTGGTGGTCGCGCGGGAGGTCGGGCAT
GTATTGAACACATTTATCCGTCTCGGTCTCCAGCCTGATGAAGATCTCCT
CATGCGCGCCCAAGCCCTTTTCCTTCAACCCACCCATTCCTACCCCGTGT
CCCCGCCCGCCCTCCCTCCCTCCCTCATCCTCCACCACGCCCCCCTCCGT
AGCCTTGCCATGGTCCTTGTTGCTTTTGCTCGTTTTAAATATCATCCCGG
ACAGGCCTTTCTCCTCCACGCCGCCAACACAGGCTTCAAAGCGACAGATG
GAGGAGGAGGAGGAGGACGAGGACGAGGAGGAGGACGAGGAGGAGGAAGG
GGGGGAAGCGCTTTGCACACAGCCTTATTCCTGAGCGCGTTGAGCCGACT
GGGGCACGAGCCAACAAGGACGCAGGTGGATATTGCCTTTGGGATGCTGG
CCTCTAACGTAGGGGAATTAGGCGATAAATGTTTGTTTAACACGATGTAC
GCCCTTGGTAAATGGGAGCCCTCTTTGAGGGAGGGCGGGAAGGGGGGCGG
GGCTGAAGGAGGGAGGGAGGGAGAAGGAGGGAGAGGGAGGAAAGCATTTT
TGAAGGTGTGGGAGGAAGAGAGGGCTTGGGAGTGGTTGAGGGGCTTGGCG
GTGTCGCAGTTGGTGGTGACTGCGTGGAGTTTGAAGGCGTTGGGGTACTG
GTGCGCATCTCCGACGGTGGCACGTGCGTTCAAGGAGGCGGTGGAGGGAG
GGAGGGAGGGAGGGAGGGAGAGAAGGGAAGAAGGTGGGGCCGATTTGACG
GATACGGAGGCGGCGTCATTGTTGCATTCATTGCGGTGCATTGGGGTGGA
TGTAAGTGAGTACCCTCCCCTAGTTCTGCTCAAGGGAGAAAGAGGCGGAC
TTTCCTCTCTCCCCTCTTCTCCTATTTCTTCCTCTTCCTCATCTTCCTCC
TCTTTAAAAGAGGGTCTAGGAGGAGGTGGAAGGCCCTCCTCGCCCGTAAT
GTTACTCACGCGAGAAAGAGCTCGACAGCAGGTACGAGTCAAAATCCCCA
TTTTCCCTTCAGGGGAGGACGTTGCCGGTGCGGAGGATGAAGGGAGAAAG
AGAGCGGAAAAGGAGGAAGGAGAGGAGAAAGAGGAACAGGAATAG back to topCoding sequence (CDS) from alignment at chr2:1397848..1401242+ >NO02G05230.1 ID=NO02G05230.1|Name=NO02G05230.1|organism=Nannochloropsis oceanica|type=CDS|length=2916bp|location=Sequence derived from alignment at chr2:1397848..1401242+ (Nannochloropsis oceanica) ATGCGGCTGTGTCGAAGAAGACCCAGGAGTGAAGGAGGAGGACGCGCCTC AGCAACCGCACCTCTTTTTCTCCTCGCCCTCCTTCTTCCGGACCACGCCT GTGCTTTCTTCACCGCCAGTCAACGTCGCCACAACACTCCGCATGAGAGT AGCCATCTCTCACCATATTCCTCTTCTTCCTCTTCTTCCACTTCCTCTTC CGATTTCACTACTCCGTCTTCGTCTTCAATCCCCACTCACCTCCGCGCTT CCCCCTCTCCTTCCTCCTCTTCCTCCTCTCCCTCTTCGCCTTCCTCTACC TCTCCCTCCTCAACCAACCACCACCACAAGCTCCTAAATCACGCCCTGGA GAATCAATCGACCTACCAAGACCTCCTCCTCCTCATCGCCTCGGACGTCA ACAATTTCAACAGCATTAATTGCGCAACCGCCCTCTCACGCCTCTCGCGA TTGGCTTTCCAAGAACATCGGCGGCCGCACACCATCACGGCAGACCCGAC TGTCCGGGCTCTACTGAGCCAAGTCGAGACGCAAATAGAGAGCAGTGGCC CGGGGCAACAAAATCAATTTTTGTCATCCTTGGCCCGGATGGGGGTCGTG CCCGAGGGGGAGCTGCTCCGGAGACTACAGGAGAAGATAGAGGAAGATGT GGAGGGGTATCGGGCGGTGGAACTTGCAGGGCTGCTGAATGCCATGGCTC GTCTCTCTTCCCCGTCCTCCTTCGCCTCCTCGTCCTCGTTCCCCCCATCG GACTCATCATTCTCCTCCTTCTCGTCCTCCTCCTCCTCCTCGGGGAGCAG TGGGGGGCCGGAAGGAAGAAGAGGAGGAGGAGGAGGAGGCAAGGATGGTG CACTGTTGAGCAATCTTTACTGCTCCCTGGTCAAGCTTCTCAACCGCTCT CCGGGGCCCGCAGTCACACGACCTTTCCTTCGTCGCCTTCTCGCCCTGGA GAGAGGGAGGAAGGGGAAGGGAGGAGAGGGGTTGGAAAAGGGCTTGCGAG TGTTGGACTCGCATTGGCTCGCGCAGGTGCTCAATGTGTTGGGGAGGGCG GCGGGACAAGACGAAGAAGAGGAGGAGGAAGGGAGGGAGGATAAGGGCGA CAGCGACAGCAGCATTGACCTGGTCTTCCTCCTCGCGGCACAAGACGAAG TCCTTCGACGCCTCAATCACCTCCCCCCCCTCGATCTAGCGATGTGTGCG TCGGCACTAGGCAAGCTCCATCCTCTCCCCGGGCCCTTCTTTTACCTTGC CCTCTGCAACCACGTTTCCAAACGCCTTTCCTCTTCCCCTCCCTCCTCCT CATCCTCCACCTTCTCCTCCAATTTCCCCACCCCCTTCTCCTCCTCCTCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCACCCAGACCCT CGCCCTCCTCACCAACGGTCTTGGTAACCTCCAACACACCTCCTCCTCCC CCTTACCCTCCTCCTCCCTCTTCTCCTCCCTCCTCCTTGATCACATCCAG CCCCGCCTCCCCTCCTTCCGTCCCTCCGAGCTCGCCAACGTCCTTGGAGG CCTGGGCAAGCTCCGTGCCTCCCCCTCCCCCTCCTTCCTCTCCCTTGCCA CAGACCTCCTCATCAAACAGGCCGACGCCTTCACCCCGTCGGAGATGGCT AGTGCCGTGTTTGGCCTGGTGAAAATGAAGGCCAAATGGAGCAAGGAATT GCGGAGCGCAGTGCAGGGGTGGGGGGATAGGACGATGAGAAAGGTGGAAA GGATGGTGGTGGAGGGAGGGAGGGAGGGAGGGAGGAGGACGGCCGTGGTG GTCGCGCGGGAGGTCGGGCATGTATTGAACACATTTATCCGTCTCGGTCT CCAGCCTGATGAAGATCTCCTCATGCGCGCCCAAGCCCTTTTCCTTCAAC CCACCCATTCCTACCCCGTGTCCCCGCCCGCCCTCCCTCCCTCCCTCATC CTCCACCACGCCCCCCTCCGTAGCCTTGCCATGGTCCTTGTTGCTTTTGC TCGTTTTAAATATCATCCCGGACAGGCCTTTCTCCTCCACGCCGCCAACA CAGGCTTCAAAGCGACAGATGGAGGAGGAGGAGGAGGACGAGGACGAGGA GGAGGACGAGGAGGAGGAAGGGGGGGAAGCGCTTTGCACACAGCCTTATT CCTGAGCGCGTTGAGCCGACTGGGGCACGAGCCAACAAGGACGCAGGTGG ATATTGCCTTTGGGATGCTGGCCTCTAACGTAGGGGAATTAGGCGATAAA TGTTTGTTTAACACGATGTACGCCCTTGGTAAATGGGAGCCCTCTTTGAG GGAGGGCGGGAAGGGGGGCGGGGCTGAAGGAGGGAGGGAGGGAGAAGGAG GGAGAGGGAGGAAAGCATTTTTGAAGGTGTGGGAGGAAGAGAGGGCTTGG GAGTGGTTGAGGGGCTTGGCGGTGTCGCAGTTGGTGGTGACTGCGTGGAG TTTGAAGGCGTTGGGGTACTGGTGCGCATCTCCGACGGTGGCACGTGCGT TCAAGGAGGCGGTGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAAGGGAA GAAGGTGGGGCCGATTTGACGGATACGGAGGCGGCGTCATTGTTGCATTC ATTGCGGTGCATTGGGGTGGATGTAAGTGAGTACCCTCCCCTAGTTCTGC TCAAGGGAGAAAGAGGCGGACTTTCCTCTCTCCCCTCTTCTCCTATTTCT TCCTCTTCCTCATCTTCCTCCTCTTTAAAAGAGGGTCTAGGAGGAGGTGG AAGGCCCTCCTCGCCCGTAATGTTACTCACGCGAGAAAGAGCTCGACAGC AGGTACGAGTCAAAATCCCCATTTTCCCTTCAGGGGAGGACGTTGCCGGT GCGGAGGATGAAGGGAGAAAGAGAGCGGAAAAGGAGGAAGGAGAGGAGAA AGAGGAACAGGAATAG back to top
|