NO02G04110.1, NO02G04110.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G04110.1
Unique Name	NO02G04110.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4265
Alignment location	chr2:1120051..1124775 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:1120051..1124775 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G04110.1 vs.
Match: EWM30335.1 (aconitate mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 1448.3 bits (3748), Expect = 0.000e+0
Identity = 712/789 (90.24%), Postives = 749/789 (94.93%), Query Frame = 0

Query:    1 MLASRSSLRRLRPVTGTALRGSLASLQLQTRSMAGTPLSILDPKGSPTIEDTYSKMASRLAVVRKTLNRPLTLAEKILFAHLDDPTTKITRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAENGSVKDLHAAKVTNKEVYDFLASAGAKFGIGFWKPGSGIIHQIILENYAFPGGLIIGTDSHTPNAGGLGLLAIGVGGADAVDVMAGMPWELKAPKVIGVKLTGELSGWTSPKDIILKLAGILTVKGGTGAIIEYFGPGVESISATGLATIANMGAEIGATTSTFPYSEKMSSYLRATKREGLAAAADKFKTNLTPDDGCEYDQLIEIDLSSLKPHVNGPFTPDWAHVVGPDFKKTLKEKDWPQNLSAGLIGSCTNSSYEDMTRSAAITKQALEAGLKFKVPFHVTPGSEQVRATIERDGLIEIFEKAGGSVLANACGPCIGQWNRNDVPKGTKNSIITSYNRNFAKRNDGNPNTHAFVSSPELVTATAFAGDITFDPTRDTIKLPNGKDFKFASPVGKELPPKGFDPGEDTFQASPEDSSGLNVSVDPKSSRLALLEAFDRWNGKDLTDMPVLIKAKGKCTTDHISMAGPWLKFRGHLDNISNNLLIGAENAETGKINEVTNIITGAKGKVPEIARQYKASGVSWVVLGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFADPKDYDRISGHDRVSILGLKDLQPGKPLKLLVKPAGGGKEFEIVVNHTFNDEQIEWFKYGSALNRMKAMAK 790
            MLASRSSL RLRP   TALRGS++    Q R++AGTPLS+LDPKGSPTIE+TY+KMASRL VVRKTLNRPLTLAEKILFAHLDDPTTK+TRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAENGS KDLHAA+VTNKEVYDFLASAGAKFGIGFWKPGSGIIHQIILENYAFPGGLIIGTDSHTPNAGGLGLLAIGVGGADAVDVMAGMPWELKAPKVIGVKLTGE+SGWTSPKD+ILKLAGILTVKGGTGAI+EYFGPGVE++SATGLATIANMGAEIGATTSTFPY++KMS YLRATKREGLA AADKFK NL+ D+GCEYDQLIEI+LS LKPH+NGPFTPDWAHVVGP+FKKTL+EK WP+ LSAGLIGSCTNSSYEDMTRSAA+TKQAL AGLKFKVPFHVTPGSEQVRATI+RDGLI  FE+AG SVLANACGPCIGQW+R DV KG+KNSIITSYNRNFAKRNDGNP THAFVSSPELVTATAFAG ITFDPTRDTIK P+GKDFKFA PVG ELPP+GFDPGEDTFQA PE+SSGL VSVDP S RLALLEAFDRWNGKDLTDMPVLIKAKGKCTTDHISMAGPWLKFRGHLDNISNNLLIGAENAETGKINEVTNIITG KGKVPE+ARQYKA GVSWVV+GDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFADPKDYDRISGHDR+SILGL DLQPGKPLK+LVKPAGG   FEI VNHTFN+EQI+WFKYGSALNRMKAMAK
Sbjct:   40 MLASRSSLGRLRPAMSTALRGSMSLF--QARTLAGTPLSVLDPKGSPTIEETYAKMASRLQVVRKTLNRPLTLAEKILFAHLDDPTTKVTRGETYLKLRPDRVAMQDATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAENGSAKDLHAAQVTNKEVYDFLASAGAKFGIGFWKPGSGIIHQIILENYAFPGGLIIGTDSHTPNAGGLGLLAIGVGGADAVDVMAGMPWELKAPKVIGVKLTGEMSGWTSPKDVILKLAGILTVKGGTGAIVEYFGPGVETVSATGLATIANMGAEIGATTSTFPYTQKMSDYLRATKREGLADAADKFKANLSADEGCEYDQLIEINLSDLKPHLNGPFTPDWAHVVGPEFKKTLEEKKWPEELSAGLIGSCTNSSYEDMTRSAALTKQALAAGLKFKVPFHVTPGSEQVRATIDRDGLIGTFEEAGASVLANACGPCIGQWHRKDVEKGSKNSIITSYNRNFAKRNDGNPGTHAFVSSPELVTATAFAGTITFDPTRDTIKTPDGKDFKFAPPVGMELPPRGFDPGEDTFQAPPENSSGLEVSVDPASQRLALLEAFDRWNGKDLTDMPVLIKAKGKCTTDHISMAGPWLKFRGHLDNISNNLLIGAENAETGKINEVTNIITGEKGKVPEVARQYKAKGVSWVVVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFADPKDYDRISGHDRLSILGLSDLQPGKPLKVLVKPAGGKAPFEITVNHTFNEEQIDWFKYGSALNRMKAMAK 826

The following BLAST results are available for this feature:

BLAST of NO02G04110.1 vs.

BLAST of NO02G04110.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30335.1	0.000e+0	90.24	aconitate mitochondrial [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G04110	NO02G04110	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G04110.1	NO02G04110.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G04110.1.cds1	NO02G04110.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G04110.1.cds2	NO02G04110.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:1120051..1124775+
coding sequence from alignment at chr2:1120051..1124775+

mRNA sequence

>NO02G04110.1 ID=NO02G04110.1|Name=NO02G04110.1|organism=Nannochloropsis oceanica|type=mRNA|length=4265bp
GTCCGAATCATGATTGGTACCGCTTGTAGGGAGTAGGTGTGTGGGGCAGC
ATAAAAGAGTAAGTGAGTGAGCTGCGAATCGTCATGAGCTATCTTTCATC
ACATTCGAACCCTTCGAATGTGGCTACTGGCCACCAATGCGAAACCTTGC
CCGTAGAAGGCACGATAGGGGGAGTCGTTACACAACTACAGGCGCTACTG
CGGGATGAGGGGCAAGGGTCAACGTTGGTCAGGCAAGGCAAGAAAAGGCT
TGGCTTCGGATGTCCCGACTTCTCTCCTCACAATTGGAGCGCGAGATTCT
CGGAGCAGTTATGGCATGCCCTCGTTGGCCCCCCGCACAACTATTTCCAG
TCCAAACACCTTCCACCAACCCACACTCAAAAGAGCTACTGCAACAAAGG
AGACAATACGAGACTGTTCATGGTGCTGCTGTAGGCATGGGAAGGGCAGA
AAGGCGGTCTTTACTGTGATGTGAACGAACGCCTTTCTCCCAATGACTGA
GAAGCTTCCGTGCGTTGAAGACTCTTTGGGCCTTCCATGGCCCTCCCCTG
CTTTGGAGGACAGGGACCACGCCACAGACACCGCGTGAGGTTCCCGCGCT
TTCCAACCCGGAACCTTTCTGCGCAGCGGCTGGGGCTAGGCATCGTCTGC
TCTTCTTGCCCACGTGGGCACCATGAAATCATCAGGGAATGAGAACAAAA
CGCTCGTCGCTTCTTCCAAACCACCGCGTCGCGGCCGTGGGCAAGCGCAC
CAGCAGCGCTGTGGCTGTCCCGCCCGCACAAAACATTGCTTACGAACGCT
TATATACCTTCTACATATTGCGTGTGGTTCTCACCCTCATTTTCCCTCCT
TACACCCAAACAGCACACCCTATCGGTATCTACCCGTCGAGAAAAGGAGG
CCAACAAGATGCTGGCGTCCCGCTCTTCCCTACGGCGCCTGCGGCCTGTG
ACTGGCACGGCCCTGCGCGGCAGCCTCGCGTCGCTGCAACTTCAAACCCG
CTCCATGGCCGGCACCCCTCTCTCGATTCTGGACCCCAAGGGCAGTCCTA
CCATCGAGGACACCTACTCCAAGATGGCATCCCGCCTGGCCGTGGTCCGA
AAGACCTTGAACCGCCCCCTGACGCTGGCGGAGAAGATTCTTTTTGCTCA
CTTGGACGACCCCACAACGAAGATCACCCGAGGGGAGACTTACTTAAAAC
TGCGTCCTGATCGAGTGGCAATGCAGGACGCCACGGCGCAGATGGCGGTG
CTGCAGTTTATTTCCTCCGGGTTGCCCAAGACGGCGGTACCGAGCACGAT
CCACTGCGATCACTTGATTGCCGCGGAGAATGGCTCGGTAAAGGATTTGC
ATGCCGCGAAGGTGACGAACAAGGAAGTCTACGATTTCCTGGCTTCTGCG
GGGGCGAAGTTTGGGATTGGATTTTGGAAGCCGGGCTCGGGGATTATCCA
TCAGATTATTTTGGAGAACTATGCCTTTCCCGGGGGGTTGATCATTGGGA
CGGACTCGCACACCCCGAATGCGGGGGGGCTTGGTTTGCTTGCCATCGGG
GTGGGGGGTGCGGACGCAGTGGACGTGATGGCGGGGATGCCTTGGGAGCT
GAAGGCACCTAAGGTGATCGGCGTGAAGCTGACAGGGGAGTTGTCTGGGT
GGACAAGCCCGAAGGATATTATCCTGAAGCTGGCGGGCATCTTGACCGTG
AAGGGGGGGACGGGCGCGATTATCGAGTACTTTGGGCCGGGGGTGGAAAG
CATCTCAGCTACTGGTTTGGCGACGATTGCGAATATGGGTGCCGAGATTG
GTGCGACCACGTCCACATTCCCCTATTCCGAGAAGATGAGTTCTTACCTT
CGGGCGACGAAGAGGGAGGGCTTGGCGGCGGCTGCTGACAAGTTCAAGAC
GAACCTGACCCCGGATGACGGGTGTGAGTACGACCAGCTGATTGAGATCG
ACCTGTCGTCGCTTAAACCTCACGTAAACGGACCCTTCACCCCGGATTGG
GCCCATGTCGTGGGTCCCGACTTCAAGAAGACGCTCAAGGAGAAAGACTG
GCCTCAAAACCTCTCGGCCGGTCTGATCGGCTCTTGCACGAATTCTTCCT
ACGAGGATATGACTCGCTCGGCGGCTATCACCAAGCAAGCGCTCGAGGCC
GGGTTGAAGTTCAAGGTGCCCTTTCACGTCACCCCTGGCTCGGAGCAGGT
GCGCGCGACTATTGAGCGCGATGGTCTGATCGAGATTTTTGAGAAGGCCG
GCGGCTCCGTCCTTGCCAATGCCTGTGGCCCGTGCATCGGGCAGTGGAAC
CGCAACGATGTCCCCAAGGGCACGAAGAACAGCATCATCACCTCTTACAA
CCGGAACTTTGCCAAGCGCAACGACGGTAACCCCAACACGCACGCCTTCG
TCTCCTCTCCCGAGCTGGTGACGGCCACGGCATTCGCTGGCGACATCACG
TTTGACCCGACGCGAGACACGATCAAGCTGCCGAACGGCAAGGACTTCAA
GTTTGCCTCTCCGGTGGGGAAGGAGCTACCCCCTAAGGGGTTCGATCCCG
GGGAGGATACATTCCAGGCGTCTCCTGAGGATAGTTCGGGATTAAATGTC
AGCGTTGACCCCAAGAGTTCGCGATTGGCGCTGTTGGAGGCTTTTGACCG
GTGGAATGGAAAGGATCTGACGGACATGCCGGTGCTTATTAAAGCGAAGG
GGAAGTGCACGACGGATCACATTAGCATGGCGGGACCTTGGTTGAAATTT
AGGGGTCACCTGGACAATATTTCGAACAACTTGCTGATTGGTGCAGAGAA
CGCGGAGACAGGGAAGATCAACGAGGTGACGAATATCATCACTGGTGCGA
AGGGGAAGGTGCCTGAGATTGCCCGGCAGTACAAGGCTTCGGGGGTGAGC
TGGGTGGTGTTGGGGGATGAGAATTATGGGGAGGGGAGCTCGAGGGAGCA
TGCGGCGTTGGAACCTAGGCACCTGGGCGGCCGGGCGATTATTGTGAAGA
GTTTTGCAAGGATCCACGAGACAAATTTGAAGAAGCAGGGGATGCTGCCT
TTGACTTTTGCGGACCCCAAGGACTACGACCGTATTAGTGGGCACGATCG
CGTCTCGATTTTGGGGTTGAAGGACTTGCAACCAGGGAAGCCTCTGAAGT
TGCTGGTGAAGCCGGCCGGGGGCGGGAAGGAGTTTGAGATTGTGGTAAAT
CACACTTTCAATGACGAGCAGATTGAGTGGTTTAAGTATGGGAGTGCGTT
GAACAGGATGAAGGCCATGGCAAAGTAAGGAGGGAGGGAGGCAGCGAGGG
AGGGAAGGTCTGCAGTGTGTTGGAGGTTGATTGATGACGGCGCCGCGCGA
CGAGATGATACCAACTGGTTTTATTTTTATGGTATTTTTATTTTTCCTGG
TTCCAGCTGCATCAGCGTTAGCAGCAGCAGCAATAGGGGCAGCACCAGCG
ATACCGTGCTTGAGAAATATGTGGACTGACCTGTACATGCAGCAGCAGCA
GCAGCAGCAGCAGCATAGCAGTCTTTGCCATTCCATGTCCAGGACCCCTT
GGTCGGTACTTTTGTCGAGAAAGAGAGAAGAGCATTAGGGACAGTGAATG
AATGAAGGAGAGAGAGAGGGAGGGAGGGCGTAGGGAGGGAGGGCGCACGA
GGGGGAGCGGCTTTTCCTTCTTGATTTCACTTGGCTGTGTTGTTTTCACG
ATCAAAGAAAGAAAATGACTTTAACTTGGCTGTGTTTTTTTTCACGATCA
AAGAAAAACGACGACAAAATGAGGAAGGAGGATCCCGTGTAACCCATTTT
TGGTAATGAGAGAGCTAGAGAGGAAAATAGGAGAGATGAAAAGGAGGAGG
AAGTAGAGAGTGGAGGTAAGACCAGCCTGGATTTTTGGAGACGCAAGGAG
GGAGAGAGAAAGGGAAGGAATCCGTACGCTTACACACACTCATAAAAGAA
GAAATAAAAGAGAAGGAAGGAGCAGCAAAAGAGATGCAGACATGGCCGCC
ATCACGCACAAATTCTGTTCGCATGTACACGTATTCGAGATCGATCCACG
ACGAGGAATTACACTGGTTCTACGCCGCTCTTCCACGTTCTGCCATGCCT
TGCTCATTCCCTCAACAGCTCAGTGTGCTCTGATGAGAGTGTCTTTGGAT
AAGCACTACGGAAAGCTTAGTAAAAGAGGAGCAAGAAAAAGCGGCAAAAA
AACAAGTACGTACGGATTGAAAGAAATGCACGCATGGAAAAATTCAGAGA
TTTTTCCTTTTGGCT

protein sequence of NO02G04110.1

>NO02G04110.1-protein ID=NO02G04110.1-protein|Name=NO02G04110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=790bp
MLASRSSLRRLRPVTGTALRGSLASLQLQTRSMAGTPLSILDPKGSPTIE
DTYSKMASRLAVVRKTLNRPLTLAEKILFAHLDDPTTKITRGETYLKLRP
DRVAMQDATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAENGSVKDLHAA
KVTNKEVYDFLASAGAKFGIGFWKPGSGIIHQIILENYAFPGGLIIGTDS
HTPNAGGLGLLAIGVGGADAVDVMAGMPWELKAPKVIGVKLTGELSGWTS
PKDIILKLAGILTVKGGTGAIIEYFGPGVESISATGLATIANMGAEIGAT
TSTFPYSEKMSSYLRATKREGLAAAADKFKTNLTPDDGCEYDQLIEIDLS
SLKPHVNGPFTPDWAHVVGPDFKKTLKEKDWPQNLSAGLIGSCTNSSYED
MTRSAAITKQALEAGLKFKVPFHVTPGSEQVRATIERDGLIEIFEKAGGS
VLANACGPCIGQWNRNDVPKGTKNSIITSYNRNFAKRNDGNPNTHAFVSS
PELVTATAFAGDITFDPTRDTIKLPNGKDFKFASPVGKELPPKGFDPGED
TFQASPEDSSGLNVSVDPKSSRLALLEAFDRWNGKDLTDMPVLIKAKGKC
TTDHISMAGPWLKFRGHLDNISNNLLIGAENAETGKINEVTNIITGAKGK
VPEIARQYKASGVSWVVLGDENYGEGSSREHAALEPRHLGGRAIIVKSFA
RIHETNLKKQGMLPLTFADPKDYDRISGHDRVSILGLKDLQPGKPLKLLV
KPAGGGKEFEIVVNHTFNDEQIEWFKYGSALNRMKAMAK*

mRNA from alignment at chr2:1120051..1124775+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G04110.1 ID=NO02G04110.1|Name=NO02G04110.1|organism=Nannochloropsis oceanica|type=mRNA|length=4725bp|location=Sequence derived from alignment at chr2:1120051..1124775+ (Nannochloropsis oceanica)
GTCCGAATCATGATTGGTACCGCTTGTAGGGAGTAGGTGTGTGGGGCAGC
ATAAAAGAGTAAGTGAGTGAGCTGCGAATCGTCATGAGCTATCTTTCATC
ACATTCGAACCCTTCGAATGTGGCTACTGGCCACCAATGCGAAACCTTGC
CCGTAGAAGGCACGATAGGGGGAGTCGTTACACAACTACAGGCGCTACTG
CGGGATGAGGGGCAAGGGTCAACGTTGGTCAGGCAAGGCAAGAAAAGGCT
TGGCTTCGGATGTCCCGACTTCTCTCCTCACAATTGGAGCGCGAGATTCT
CGGAGCAGTTATGGCATGCCCTCGTTGGCCCCCCGCACAACTATTTCCAG
TCCAAACACCTTCCACCAACCCACACTCAAAAGAGCTACTGCAACAAAGG
AGACAATACGAGACTGTTCATGGTGCTGCTGTAGGCATGGGAAGGGCAGA
AAGGCGGTCTTTACTGTGATGTGAACGAACGCCTTTCTCCCAATGACTGA
GAAGCTTCCGTGCGTTGAAGACTCTTTGGGCCTTCCATGGCCCTCCCCTG
CTTTGGAGGACAGGGACCACGCCACAGACACCGCGTGAGGTTCCCGCGCT
TTCCAACCCGGAACCTTTCTGCGCAGCGGCTGGGGCTAGGCATCGTCTGC
TCTTCTTGCCCACGTGGGCACCATGAAATCATCAGGGAATGAGAACAAAA
CGCTCGTCGCTTCTTCCAAACCACCGCGTCGCGGCCGTGGGCAAGCGCAC
CAGCAGCGCTGTGGCTGTCCCGCCCGCACAAAACATTGCTTACGAACGCT
TATATACCTTCTACATATTGCGTGTGGTTCTCACCCTCATTTTCCCTCCT
TACACCCAAACAGCACACCCTATCGGTATCTACCCGTCGAGAAAAGGAGG
CCAACAAGATGCTGGCGTCCCGCTCTTCCCTACGGCGCCTGCGGCCTGTG
ACTGGCACGGTAAGGTCGAAAATCGGGAGGAAGGAGAGAAGGGAAAGGCT
TGGGCGGAAAGAAGCAAGGGGAGGAATGGTGGGATGTCTGTTATGTAGGG
GTGCTTGCTTGGGCTTTTGAATGAATGTCGCGTTGATTGGAACCTTCGTC
CTTGATAAGTTGTTTGATTCAAGCTTTATTTCATGGGCATCTACCATTCT
ACACGGTTTCTGGTAGCACAGGTCTTCGGGGACTCTGATCGCTTGCCCTT
TCCTGATGCGTGATGCATATATGTTTTCCTCATTCTTTTCCTTCTTTTCC
TCCTCCTCCTTGCCCTCCTCCTTGCCCTCCTCCTTGCCCTCCTCCTCCTC
TTCTTCCTCCTCCTCCAGTTGTGCTATTGCGCCGCTTCTCTATTTTCTTA
TACACTTGCATATGGTAATCCTCACTCCCCGACCACCCTCCCTCTTCATC
CACCCAACCCAACAAACAGGCCCTGCGCGGCAGCCTCGCGTCGCTGCAAC
TTCAAACCCGCTCCATGGCCGGCACCCCTCTCTCGATTCTGGACCCCAAG
GGCAGTCCTACCATCGAGGACACCTACTCCAAGATGGCATCCCGCCTGGC
CGTGGTCCGAAAGACCTTGAACCGCCCCCTGACGCTGGCGGAGAAGATTC
TTTTTGCTCACTTGGACGACCCCACAACGAAGATCACCCGAGGGGAGACT
TACTTAAAACTGCGTCCTGATCGAGTGGCAATGCAGGACGCCACGGCGCA
GATGGCGGTGCTGCAGTTTATTTCCTCCGGGTTGCCCAAGACGGCGGTAC
CGAGCACGATCCACTGCGATCACTTGATTGCCGCGGAGAATGGCTCGGTA
AAGGATTTGCATGCCGCGAAGGTGACGAACAAGGAAGTCTACGATTTCCT
GGCTTCTGCGGGGGCGAAGTTTGGGATTGGATTTTGGAAGCCGGGCTCGG
GGATTATCCATCAGATTATTTTGGAGAACTATGCCTTTCCCGGGGGGTTG
ATCATTGGGACGGACTCGCACACCCCGAATGCGGGGGGGCTTGGTTTGCT
TGCCATCGGGGTGGGGGGTGCGGACGCAGTGGACGTGATGGCGGGGATGC
CTTGGGAGCTGAAGGCACCTAAGGTGATCGGCGTGAAGCTGACAGGGGAG
TTGTCTGGGTGGACAAGCCCGAAGGATATTATCCTGAAGCTGGCGGGCAT
CTTGACCGTGAAGGGGGGGACGGGCGCGATTATCGAGTACTTTGGGCCGG
GGGTGGAAAGCATCTCAGCTACTGGTTTGGCGACGATTGCGAATATGGGT
GCCGAGATTGGTGCGACCACGTCCACATTCCCCTATTCCGAGAAGATGAG
TTCTTACCTTCGGGCGACGAAGAGGGAGGGCTTGGCGGCGGCTGCTGACA
AGTTCAAGACGAACCTGACCCCGGATGACGGGTGTGAGTACGACCAGCTG
ATTGAGATCGACCTGTCGTCGCTTAAACCTCACGTAAACGGACCCTTCAC
CCCGGATTGGGCCCATGTCGTGGGTCCCGACTTCAAGAAGACGCTCAAGG
AGAAAGACTGGCCTCAAAACCTCTCGGCCGGTCTGATCGGCTCTTGCACG
AATTCTTCCTACGAGGATATGACTCGCTCGGCGGCTATCACCAAGCAAGC
GCTCGAGGCCGGGTTGAAGTTCAAGGTGCCCTTTCACGTCACCCCTGGCT
CGGAGCAGGTGCGCGCGACTATTGAGCGCGATGGTCTGATCGAGATTTTT
GAGAAGGCCGGCGGCTCCGTCCTTGCCAATGCCTGTGGCCCGTGCATCGG
GCAGTGGAACCGCAACGATGTCCCCAAGGGCACGAAGAACAGCATCATCA
CCTCTTACAACCGGAACTTTGCCAAGCGCAACGACGGTAACCCCAACACG
CACGCCTTCGTCTCCTCTCCCGAGCTGGTGACGGCCACGGCATTCGCTGG
CGACATCACGTTTGACCCGACGCGAGACACGATCAAGCTGCCGAACGGCA
AGGACTTCAAGTTTGCCTCTCCGGTGGGGAAGGAGCTACCCCCTAAGGGG
TTCGATCCCGGGGAGGATACATTCCAGGCGTCTCCTGAGGATAGTTCGGG
ATTAAATGTCAGCGTTGACCCCAAGAGTTCGCGATTGGCGCTGTTGGAGG
CTTTTGACCGGTGGAATGGAAAGGATCTGACGGACATGCCGGTGCTTATT
AAAGCGAAGGGGAAGTGCACGACGGATCACATTAGCATGGCGGGACCTTG
GTTGAAATTTAGGGGTCACCTGGACAATATTTCGAACAACTTGCTGATTG
GTGCAGAGAACGCGGAGACAGGGAAGATCAACGAGGTGACGAATATCATC
ACTGGTGCGAAGGGGAAGGTGCCTGAGATTGCCCGGCAGTACAAGGCTTC
GGGGGTGAGCTGGGTGGTGTTGGGGGATGAGAATTATGGGGAGGGGAGCT
CGAGGGAGCATGCGGCGTTGGAACCTAGGCACCTGGGCGGCCGGGCGATT
ATTGTGAAGAGTTTTGCAAGGATCCACGAGACAAATTTGAAGAAGCAGGG
GATGCTGCCTTTGACTTTTGCGGACCCCAAGGACTACGACCGTATTAGTG
GGCACGATCGCGTCTCGATTTTGGGGTTGAAGGACTTGCAACCAGGGAAG
CCTCTGAAGTTGCTGGTGAAGCCGGCCGGGGGCGGGAAGGAGTTTGAGAT
TGTGGTAAATCACACTTTCAATGACGAGCAGATTGAGTGGTTTAAGTATG
GGAGTGCGTTGAACAGGATGAAGGCCATGGCAAAGTAAGGAGGGAGGGAG
GCAGCGAGGGAGGGAAGGTCTGCAGTGTGTTGGAGGTTGATTGATGACGG
CGCCGCGCGACGAGATGATACCAACTGGTTTTATTTTTATGGTATTTTTA
TTTTTCCTGGTTCCAGCTGCATCAGCGTTAGCAGCAGCAGCAATAGGGGC
AGCACCAGCGATACCGTGCTTGAGAAATATGTGGACTGACCTGTACATGC
AGCAGCAGCAGCAGCAGCAGCAGCATAGCAGTCTTTGCCATTCCATGTCC
AGGACCCCTTGGTCGGTACTTTTGTCGAGAAAGAGAGAAGAGCATTAGGG
ACAGTGAATGAATGAAGGAGAGAGAGAGGGAGGGAGGGCGTAGGGAGGGA
GGGCGCACGAGGGGGAGCGGCTTTTCCTTCTTGATTTCACTTGGCTGTGT
TGTTTTCACGATCAAAGAAAGAAAATGACTTTAACTTGGCTGTGTTTTTT
TTCACGATCAAAGAAAAACGACGACAAAATGAGGAAGGAGGATCCCGTGT
AACCCATTTTTGGTAATGAGAGAGCTAGAGAGGAAAATAGGAGAGATGAA
AAGGAGGAGGAAGTAGAGAGTGGAGGTAAGACCAGCCTGGATTTTTGGAG
ACGCAAGGAGGGAGAGAGAAAGGGAAGGAATCCGTACGCTTACACACACT
CATAAAAGAAGAAATAAAAGAGAAGGAAGGAGCAGCAAAAGAGATGCAGA
CATGGCCGCCATCACGCACAAATTCTGTTCGCATGTACACGTATTCGAGA
TCGATCCACGACGAGGAATTACACTGGTTCTACGCCGCTCTTCCACGTTC
TGCCATGCCTTGCTCATTCCCTCAACAGCTCAGTGTGCTCTGATGAGAGT
GTCTTTGGATAAGCACTACGGAAAGCTTAGTAAAAGAGGAGCAAGAAAAA
GCGGCAAAAAAACAAGTACGTACGGATTGAAAGAAATGCACGCATGGAAA
AATTCAGAGATTTTTCCTTTTGGCT

Coding sequence (CDS) from alignment at chr2:1120051..1124775+

>NO02G04110.1 ID=NO02G04110.1|Name=NO02G04110.1|organism=Nannochloropsis oceanica|type=CDS|length=2370bp|location=Sequence derived from alignment at chr2:1120051..1124775+ (Nannochloropsis oceanica)
ATGCTGGCGTCCCGCTCTTCCCTACGGCGCCTGCGGCCTGTGACTGGCAC
GGCCCTGCGCGGCAGCCTCGCGTCGCTGCAACTTCAAACCCGCTCCATGG
CCGGCACCCCTCTCTCGATTCTGGACCCCAAGGGCAGTCCTACCATCGAG
GACACCTACTCCAAGATGGCATCCCGCCTGGCCGTGGTCCGAAAGACCTT
GAACCGCCCCCTGACGCTGGCGGAGAAGATTCTTTTTGCTCACTTGGACG
ACCCCACAACGAAGATCACCCGAGGGGAGACTTACTTAAAACTGCGTCCT
GATCGAGTGGCAATGCAGGACGCCACGGCGCAGATGGCGGTGCTGCAGTT
TATTTCCTCCGGGTTGCCCAAGACGGCGGTACCGAGCACGATCCACTGCG
ATCACTTGATTGCCGCGGAGAATGGCTCGGTAAAGGATTTGCATGCCGCG
AAGGTGACGAACAAGGAAGTCTACGATTTCCTGGCTTCTGCGGGGGCGAA
GTTTGGGATTGGATTTTGGAAGCCGGGCTCGGGGATTATCCATCAGATTA
TTTTGGAGAACTATGCCTTTCCCGGGGGGTTGATCATTGGGACGGACTCG
CACACCCCGAATGCGGGGGGGCTTGGTTTGCTTGCCATCGGGGTGGGGGG
TGCGGACGCAGTGGACGTGATGGCGGGGATGCCTTGGGAGCTGAAGGCAC
CTAAGGTGATCGGCGTGAAGCTGACAGGGGAGTTGTCTGGGTGGACAAGC
CCGAAGGATATTATCCTGAAGCTGGCGGGCATCTTGACCGTGAAGGGGGG
GACGGGCGCGATTATCGAGTACTTTGGGCCGGGGGTGGAAAGCATCTCAG
CTACTGGTTTGGCGACGATTGCGAATATGGGTGCCGAGATTGGTGCGACC
ACGTCCACATTCCCCTATTCCGAGAAGATGAGTTCTTACCTTCGGGCGAC
GAAGAGGGAGGGCTTGGCGGCGGCTGCTGACAAGTTCAAGACGAACCTGA
CCCCGGATGACGGGTGTGAGTACGACCAGCTGATTGAGATCGACCTGTCG
TCGCTTAAACCTCACGTAAACGGACCCTTCACCCCGGATTGGGCCCATGT
CGTGGGTCCCGACTTCAAGAAGACGCTCAAGGAGAAAGACTGGCCTCAAA
ACCTCTCGGCCGGTCTGATCGGCTCTTGCACGAATTCTTCCTACGAGGAT
ATGACTCGCTCGGCGGCTATCACCAAGCAAGCGCTCGAGGCCGGGTTGAA
GTTCAAGGTGCCCTTTCACGTCACCCCTGGCTCGGAGCAGGTGCGCGCGA
CTATTGAGCGCGATGGTCTGATCGAGATTTTTGAGAAGGCCGGCGGCTCC
GTCCTTGCCAATGCCTGTGGCCCGTGCATCGGGCAGTGGAACCGCAACGA
TGTCCCCAAGGGCACGAAGAACAGCATCATCACCTCTTACAACCGGAACT
TTGCCAAGCGCAACGACGGTAACCCCAACACGCACGCCTTCGTCTCCTCT
CCCGAGCTGGTGACGGCCACGGCATTCGCTGGCGACATCACGTTTGACCC
GACGCGAGACACGATCAAGCTGCCGAACGGCAAGGACTTCAAGTTTGCCT
CTCCGGTGGGGAAGGAGCTACCCCCTAAGGGGTTCGATCCCGGGGAGGAT
ACATTCCAGGCGTCTCCTGAGGATAGTTCGGGATTAAATGTCAGCGTTGA
CCCCAAGAGTTCGCGATTGGCGCTGTTGGAGGCTTTTGACCGGTGGAATG
GAAAGGATCTGACGGACATGCCGGTGCTTATTAAAGCGAAGGGGAAGTGC
ACGACGGATCACATTAGCATGGCGGGACCTTGGTTGAAATTTAGGGGTCA
CCTGGACAATATTTCGAACAACTTGCTGATTGGTGCAGAGAACGCGGAGA
CAGGGAAGATCAACGAGGTGACGAATATCATCACTGGTGCGAAGGGGAAG
GTGCCTGAGATTGCCCGGCAGTACAAGGCTTCGGGGGTGAGCTGGGTGGT
GTTGGGGGATGAGAATTATGGGGAGGGGAGCTCGAGGGAGCATGCGGCGT
TGGAACCTAGGCACCTGGGCGGCCGGGCGATTATTGTGAAGAGTTTTGCA
AGGATCCACGAGACAAATTTGAAGAAGCAGGGGATGCTGCCTTTGACTTT
TGCGGACCCCAAGGACTACGACCGTATTAGTGGGCACGATCGCGTCTCGA
TTTTGGGGTTGAAGGACTTGCAACCAGGGAAGCCTCTGAAGTTGCTGGTG
AAGCCGGCCGGGGGCGGGAAGGAGTTTGAGATTGTGGTAAATCACACTTT
CAATGACGAGCAGATTGAGTGGTTTAAGTATGGGAGTGCGTTGAACAGGA
TGAAGGCCATGGCAAAGTAA

Synonyms

Publications